The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983140", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983140" } ] }, { "id": "R-SSC-983147", "name": "Release of E3 from polyubiquitinated substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"length": 1955, "header": "tr|A0A8W4FAI7-1|A0A8W4FAI7_PIG Isoform 1 of Fibronectin type III domain-containing protein 1 OS=Sus scrofa OX=9823 GN=FNDC1 PE=4 SV=2 CANONICAL=A0A8W4FAI7-1" }, "locus": { "chromosome": "1", "start_pos": 8106717, "end_pos": 8007997, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103359.2", "url": "https://www.ensembl.org/id/ENSSSCT00000103359.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075850.2", "url": "https://www.ensembl.org/id/ENSSSCP00000075850.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1277, "start_aa": "Thr", "end_pos": 1277, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1277", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1281, "start_aa": "Thr", "end_pos": 1281, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1281", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1457, "start_aa": "Thr", "end_pos": 1457, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1457", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 374, "start_aa": "Thr", "end_pos": 374, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr374", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 612, 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"https://www.uniprot.org/uniprotkb/A0A8W4FBI6/entry#A0A8W4FBI6-1", "sequence": { "sequence": "MLRGCCHRVWTRLCDLRRGLWAPAKNGRRSVVSCIDPSTGLNEEQKEFQRVAFSFAAQEMMPNMAEWDQKELFPVDMMRKAARLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTSTTAYMSIHNMCVWIIDAFGNEEQRHRFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAERQGDHYILNGSKAFISGGGEADIYVVMCRTGGPGHKGISCVVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGDEGQGFLIALRGLNGGRINVASCSLGAAHASIILTRDHLKVRKQFGEPLANNQYLQFKLADMATKLVASRLMIRSAAVALQEEREDAVALCSMAKLFATDECFEICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRMLISKSLLQE", "length": 415, "header": "tr|A0A8W4FBI6-1|A0A8W4FBI6_PIG Isoform 1 of Isobutyryl-CoA dehydrogenase, mitochondrial OS=Sus scrofa OX=9823 GN=ACAD8 PE=1 SV=1 CANONICAL=A0A8W4FBI6-1" }, "locus": { "chromosome": "9", "start_pos": 60827702, "end_pos": 60807523, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102490.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102490.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075656.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075656.1" } ] } }, { "isoform_ac": "A0A8W4FQM4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBI6/entry#A0A8W4FQM4-1", "sequence": { "sequence": "MLRGCCHRVWTRLCDLRRGLWAPAKNGRRSVVSCIDPSTGLNEEQKEFQRVAFSFAAQEMMPNMAEWDQKELFPVDMMRKAARLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTSTTAYMSIHNMCVWIIDAFGNEEQRHRFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAERQGDHYILNGSKAFISGGGEADIYVVMCRTGGPGHKGISCVVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGDEGQGFLIALRGLNGGRINVASCSLGAAHASIILTRDHLKVRKQFGEPLANNQYLQFKLADMATKLVASRLMIRSAAVALQEEREDAVALCSMAKLFATDECFEAATR", "length": 368, "header": "tr|A0A8W4FQM4-1|A0A8W4FQM4_PIG Computationally mapped isoform of Acyl-CoA dehydrogenase family member 8 OS=Sus scrofa OX=9823 GN=ACAD8 PE=1 SV=1 CANONICAL=A0A8W4FBI6-1" }, "locus": { "chromosome": "9", "start_pos": 60827664, "end_pos": 60807523, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101289.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101289.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080705.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080705.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FAL5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAL5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-70895", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70895", "resource": "Reactome", "description": "Branched-chain amino acid catabolism" }, { "id": "R-SSC-9837999", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9837999", "resource": "Reactome", "description": "Mitochondrial protein degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZQL5-1", "protein_name": "Isobutyryl-CoA dehydrogenase, mitochondrial", "gene_name": "Acad8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VAMLRTGSRRLGCLRAALQSLAQTDHRSITFCIDPSLGLNEEQKGFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGIYVRTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKRQGDHYILNGSKAFISGGGESDIYVVMCRTGGSGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCSLGAAHASVVLTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVALQEEREDAVALCSMAKLFVTEECFTICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRSLLQD", "length": 413 }, "evidence": [ { "id": "A0A8W4FBI6", "url": "https://omabrowser.org/oma/group/A0A8W4FBI6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q0NXR6-1", "protein_name": "Isobutyryl-CoA dehydrogenase, mitochondrial", "gene_name": "ACAD8", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MMLRGGCQRVGARLRGLRRGPRGPADGARRGVVSCIDPSMGLSEEQKEFQKVAFNFAAREMAPHMAEWDQKELFPVDTMRKAAQLGFGGVYVQTDVGGAGLSRLDTSIIFEALATGCTSTTAYMSIHNMCVWIIDRFGSEEQRHRLCPPLCTMEKFASYCLTEPGSGSDAASLMTSAVRQHDHYILNGSKAFISGGGEADIYVVMCRTGGPGPRGISCVVVEKGTPGLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGLNGGRINVASCSLGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAARLVASRLMIRTAATALQEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRMLISRSLLQE", "length": 416 }, "evidence": [ { "id": "A0A8W4FBI6", "url": "https://omabrowser.org/oma/group/A0A8W4FBI6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54IM8-1", "protein_name": "Isobutyryl-CoA dehydrogenase, mitochondrial", "gene_name": "acad8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISGLFKLSNKQSVLQNATKLVLQRRTFFNIVPNPSVGLTEDQKQFQSMALDFAQEKMKPFAEKWDKEEYFPRDVMREAAELGFGGIYVREDVGGSGLSRLDASIIIEALASADVSTTAFISIHNMCAGLIDIYGTEEQRKKFLPSLVSMEKIASYCLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISCLLVEKDTPGLSFGKKEEKLGWNTQPTRALIFEDCRVPVGNLIGKEGQGFSIAMNALNGGRINIGACSLGGAQSCLVAARDHVKVRKQFNQPLEHFQAVQFKMADMATKLHASRIMIRNAAAMLDAKDPSAHVYIAMAKLFACDECFKVTDDSLQLFGGYGYLKDYPVERYLRDLRVHRILEGSDAVMRLIISRELSKDDH", "length": 416 }, "evidence": [ { "id": "A0A8W4FBI6", "url": "https://omabrowser.org/oma/group/A0A8W4FBI6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9D7B6-1", "protein_name": "Isobutyryl-CoA dehydrogenase, mitochondrial", "gene_name": "Acad8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAMLRSGYRRFGCLRAALKSLAQTHHRSITFCIDPSLGLNEEQKGFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKQQGDHYILNGSKAFISGGGESDIYVVMCRTGGSGAKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQD", "length": 413 }, "evidence": [ { "id": "A0A8W4FBI6", "url": "https://omabrowser.org/oma/group/A0A8W4FBI6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UKU7-1", "protein_name": "Isobutyryl-CoA dehydrogenase, mitochondrial", "gene_name": "ACAD8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLWSGCRRFGARLGCLPGGLRVLVQTGHRSLTSCIDPSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQE", "length": 415 }, "evidence": [ { "id": "A0A8W4FBI6", "url": "https://omabrowser.org/oma/group/A0A8W4FBI6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "branched-chain amino acid catabolic process", "id": "GO:0009083", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009083", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBI6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBI6" } ], "pmid": "" }, { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBI6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBI6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "short-chain 2-methyl fatty acyl-CoA dehydrogenase activity", "id": "GO:0003853", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003853", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBI6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBI6" } ], "pmid": "" }, { "name": "flavin adenine dinucleotide binding", "id": "GO:0050660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050660", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBI6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBI6" } ], "pmid": "" }, { "name": "acyl-CoA dehydrogenase activity", "id": "GO:0003995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003995", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBI6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBI6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 186, "end_pos": 188, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "31287", "name": "", "equation": "propanoyl-CoA + oxidized [electron-transfer flavoprotein] + H(+) = acryloyl-CoA + reduced [electron-transfer flavoprotein]", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "31287", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/31287" } ] }, { "id": "44180", "name": "", "equation": "2-methylpropanoyl-CoA + oxidized [electron-transfer flavoprotein] + H(+) = 2-methylpropenoyl-CoA + reduced [electron-transfer flavoprotein]", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44180", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44180" } ] }, { "id": "48256", "name": "", "equation": "(2S)-2-methylbutanoyl-CoA + oxidized [electron-transfer flavoprotein] + H(+) = (2E)-2-methylbut-2-enoyl-CoA + reduced [electron-transfer flavoprotein]", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48256", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48256" } ] }, { "id": "R-SSC-70859", "name": "isobutyryl-CoA + FAD => methacrylyl-CoA + FADH2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [ "R-ALL-70851" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-70859", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70859" } ] }, { "id": "R-SSC-9838035", "name": "CLPXP binds mitochondrial matrix proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9838035", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9838035" } ] }, { "id": "R-SSC-9838081", "name": "LONP1 degrades mitochondrial matrix proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9838081", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9838081" } ] }, { "id": "R-SSC-9838093", "name": "LONP1 binds mitochondrial matrix proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9838093", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9838093" } ] }, { "id": "R-SSC-9838289", "name": "CLPXP degrades mitochondrial matrix proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9838289", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9838289" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-70851", "participant_name": "ISB-CoA [mitochondrial matrix]", "crossref": [ { "id": "57338", "database": "ChEBI", "url": "" }, { "id": "ZINC000008551209", "database": "ZINC", "url": "" }, { "id": "C00630", "database": "COMPOUND", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A8W4FBI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBI6" }, { "id": "PF00441", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00441" } ], "ann_type": "Domain_Extent_Annotation", 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FAM4-1", "uniprot_ac": "A0A8W4FAM4", "uniprot_id": "A0A8W4FAM4_PIG", "mass": { "chemical_mass": 12194.0, "monoisotopic_mass": 12194.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Nucleophosmin", "type": "recommended", "evidence": [ { "id": "A0A8W4FAM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAM4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FAM4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAM4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAM4", "locus": {} } ], "crossref": [ { "id": "A0A8W4FAM4", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FAM4", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR004301", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004301", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036824", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036824", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR22747", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22747", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22747:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22747:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03066", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03066", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FAM4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAM4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAM4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAM4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MENSVDIGMSPLRPQNYLFDCELKTNKDNHFKVDNDENDHQLSLGLVNLAASTKDELNTIEARAVNYEDSPIKITLATLKMSVQAAVFLEHFEITPLVVLLLKSSMRM", "length": 108, "header": "tr|A0A8W4FAM4-1|A0A8W4FAM4_PIG Isoform 1 of Nucleophosmin OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A8W4FAM4-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FAM4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAM4/entry#A0A8W4FAM4-1", "sequence": { "sequence": "MENSVDIGMSPLRPQNYLFDCELKTNKDNHFKVDNDENDHQLSLGLVNLAASTKDELNTIEARAVNYEDSPIKITLATLKMSVQAAVFLEHFEITPLVVLLLKSSMRM", "length": 108, "header": "tr|A0A8W4FAM4-1|A0A8W4FAM4_PIG Isoform 1 of Nucleophosmin OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A8W4FAM4-1" }, "locus": { "chromosome": "1", "start_pos": 78252565, "end_pos": 78251861, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100732.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100732.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075342.1", "url": 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"url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cytoplasmic translation", "id": "GO:0002181", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002181", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FAV9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAV9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of ribosome", "id": "GO:0003735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003735", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FAV9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAV9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosolic large ribosomal subunit", "id": "GO:0022625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022625", "evidence": [ { "database": "UniProtKB", "id": 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"crossref": [ { "id": "IPR037670", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037670", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YERDHCT", "url": "https://omabrowser.org/oma/group/YERDHCT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4FAX1", "url": "https://www.orthodb.org/?gene=A0A8W4FAX1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31870", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31870", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31870:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31870:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4FAX1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAX1-1", 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"chromosome": "9", "start_pos": 37615700, "end_pos": 37615107, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062111.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062111.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079850.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079850.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FAX1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAX1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LZT8-1", "protein_name": "Chromosome 15 C11orf87 homolog", "gene_name": "C15H11orf87", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSARAPKELRLALPPCLLNRTFASPNASGSGNASARGQGAGGGSSGTCITQVGQQLFQSFSSTLVLIVLVTLIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCGGNRGGRGLPQPEGGQASTQGKEARLERQARDSAFCAPSSASSSSSPPGLPCQAPCAPPPPPAPSPQGAHTASSCLDPVGEGLLQAVVLS", "length": 198 }, "evidence": [ { "id": "A0A8W4FAX1", "url": "https://omabrowser.org/oma/group/A0A8W4FAX1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V0XQJ0-1", "protein_name": "Chromosome 11 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"end_pos": 110275267, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008536", "url": "https://www.ensembl.org/id/ENSSSCG00000008536" } ] } } ], "crossref": [ { "id": "A0A8W4FB97", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FB97", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024395", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024395", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034085", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034085", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21567", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21567", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21567:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21567:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12348", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12348", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FB97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FB97-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ00", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ00", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ00-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ00-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "AALPVLPAPGKALAPGAVYCGSVPRTSAGPCALAGGGSDSSLKTFGEASLQPTPSVLLEEPSQLLSGHEAPDSLKLDAPLKDWQARNGHPRNLGTLSLGPHPLVPLPSLESEANSAARDTTQIKDKLKKRRLSEGLAASSRASLDPGGGPRGVPLRTTIPRVTSQRLLRVPRLMPPIQSMPTTPEASGAKENGLDPPQSSQGPQGLRPGAQEVKISQQYLHCNDEKMHRSLGGIVIPPIPKAGVPAGTSACTPGSLPSLPPPGQDVLMGLRPPPTRLVRERGPREKTPRSLEPKPLVPPVRDRSAAPEKPALPSSQSAPTLTAFSFSHAKGAHPLLKEEDQKETGSKVTISKSAQEKMRLKQMKEVELLWRAKEPERERELAPQGLASRRTWTKEGLLPLRSSGTLSVPTGLSSPRRNNMGVVLRKRANRASLPSIPVSKQEPSFARHASAQSLPAVLTLGSPEWEEEEETDLRAFKELRPFSNPELGLVDALQCLDSSDWQMKEKGLVSIQRLAACHSEVLAGRLHDVSLAVTGEVTNLRSKVSRLAISTLGGLFRALKKNMDQEAEEITRCLLQKMGNTSEFIQRHVTPARALVALTSAGIYHRNPLVRKCTAEHLSVVLEQIGAEKLLSGTRDSTDMLVHNLVRLAQDSNQDTRFYGRKMVNILMSNTKFDAFLKQSLPSHDLRKVMTAIKQRGIEDIDELASAKGRKVSRSLLVCENGLPTEDGYRSSQLRELTRLLEAKEYQSRMEGVGRLLEHCKAKPELITANLVQVFDAFTPRLQDSNKKVNQWALDLHPMLLSVIIAVADNLNSKNAGIYAAAARALDVMIESLDNLGLLHAFAGRVRFLSGRAVLDVTERLSVLVASVYPRKPQAVERHVLPVLWYFLNSMTGSGVLPGRGGNVRSVVGRLCRTLQEQMGSRLQDLAAGQPKQVLTTLQELLGTEKAPDSKTPGSSSPSQLHYGRIWNEPSLF", "length": 973, "header": "tr|A0A8W4FB97-1|A0A8W4FB97_PIG Isoform 1 of TOG array regulator of axonemal microtubules 2 OS=Sus scrofa OX=9823 GN=TOGARAM2 PE=4 SV=1 CANONICAL=A0A8W4FB97-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FB97-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97/entry#A0A8W4FB97-1", "sequence": { "sequence": "AALPVLPAPGKALAPGAVYCGSVPRTSAGPCALAGGGSDSSLKTFGEASLQPTPSVLLEEPSQLLSGHEAPDSLKLDAPLKDWQARNGHPRNLGTLSLGPHPLVPLPSLESEANSAARDTTQIKDKLKKRRLSEGLAASSRASLDPGGGPRGVPLRTTIPRVTSQRLLRVPRLMPPIQSMPTTPEASGAKENGLDPPQSSQGPQGLRPGAQEVKISQQYLHCNDEKMHRSLGGIVIPPIPKAGVPAGTSACTPGSLPSLPPPGQDVLMGLRPPPTRLVRERGPREKTPRSLEPKPLVPPVRDRSAAPEKPALPSSQSAPTLTAFSFSHAKGAHPLLKEEDQKETGSKVTISKSAQEKMRLKQMKEVELLWRAKEPERERELAPQGLASRRTWTKEGLLPLRSSGTLSVPTGLSSPRRNNMGVVLRKRANRASLPSIPVSKQEPSFARHASAQSLPAVLTLGSPEWEEEEETDLRAFKELRPFSNPELGLVDALQCLDSSDWQMKEKGLVSIQRLAACHSEVLAGRLHDVSLAVTGEVTNLRSKVSRLAISTLGGLFRALKKNMDQEAEEITRCLLQKMGNTSEFIQRHVTPARALVALTSAGIYHRNPLVRKCTAEHLSVVLEQIGAEKLLSGTRDSTDMLVHNLVRLAQDSNQDTRFYGRKMVNILMSNTKFDAFLKQSLPSHDLRKVMTAIKQRGIEDIDELASAKGRKVSRSLLVCENGLPTEDGYRSSQLRELTRLLEAKEYQSRMEGVGRLLEHCKAKPELITANLVQVFDAFTPRLQDSNKKVNQWALDLHPMLLSVIIAVADNLNSKNAGIYAAAARALDVMIESLDNLGLLHAFAGRVRFLSGRAVLDVTERLSVLVASVYPRKPQAVERHVLPVLWYFLNSMTGSGVLPGRGGNVRSVVGRLCRTLQEQMGSRLQDLAAGQPKQVLTTLQELLGTEKAPDSKTPGSSSPSQLHYGRIWNEPSLF", "length": 973, "header": "tr|A0A8W4FB97-1|A0A8W4FB97_PIG Isoform 1 of TOG array regulator of axonemal microtubules 2 OS=Sus scrofa OX=9823 GN=TOGARAM2 PE=4 SV=1 CANONICAL=A0A8W4FB97-1" }, "locus": { "chromosome": "3", "start_pos": 110275068, "end_pos": 110232015, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029339.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029339.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076594.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076594.1" } ] } }, { "isoform_ac": "A0A8W4FJ00-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97/entry#A0A8W4FJ00-1", "sequence": { "sequence": "ALPVLPAPGKALAPGAVYCGSVPRTSAGPCALAGGGSDSSLKTFGEASLQPTPSVLLEEPSQLLSGHEAPDSLKLDAPLKDWQARNGHPRNLGTLSLGPHPLVPLPSLESEANSAARDTTQIKDKLKKRRLSEGLAASSRASLDPGGGPRGVPLRTTIPRVTSQRLLRVPRLMPPIQSMPTTPEASGAKENGLDPPQSSQGPQGLRPGAQEVKISQQYLHCNDEKMHRSLGGIVIPPIPKAGVPAGTSACTPGSLPSLPPPGQDVLMGLSQSYLVPKPLVPPVRDRSAAPEKPALPSSQSAPTLTAFSFSHAKGAHPLLKEEDQKETGSKVTISKSAQEKMRLKQMKEVELLWRAKEPERERELAPQGLASRRTWTKEGLLPLRSSGTLSVPTGLSSPRRNNMGVVLRKRANRASLPSIPVSKQEPSFARHASAQSLPAVLTLGSPEWEEEEETDLRAFKELRPFSNPELGLVDALQCLDSSDWQMKEKGLVSIQRLAACHSEVLAGRLHDVSLAVTGEVTNLRSKVSRLAISTLGGLFRALKKNMDQEAEEITRCLLQKMGNTSEFIQRHVTPARALVALTSAGIYHRNPLVRKCTAEHLSVVLEQIGAEKLLSGTRDSTDMLVHNLVRLAQDSNQDTRFYGRKMVNILMSNTKFDAFLKQSLPSHDLRKVMTAIKQRGIEDIDELASAKGRKVSRSLLVCENGLPTEDGLSSNGPRLAGLRSSTRGGLETVEQLRELTRLLEAKEYQSRMEGVGRLLEHCKAKPELITANLVQVFDAFTPRLQDSNKKVNQWALDLHPMLLSVIIAVADNLNSKNAGIYAAAARALDVMIESLDNLGLLHAFAGRVRFLSGRAVLDVTERLSVLVASVYPRKPQAVERHVLPVLWYFLNSMTGSGVLPGRGGNVRSVVGRLCRTLQEQMGSRLQDLAAGQPKQVLTTLQESLTEEGPGQQDTWQLKPLPQLDKPS", "length": 967, "header": "tr|A0A8W4FJ00-1|A0A8W4FJ00_PIG Computationally mapped isoform of TOG array regulator of axonemal microtubules 2 OS=Sus scrofa OX=9823 GN=TOGARAM2 PE=4 SV=1 CANONICAL=A0A8W4FB97-1" }, "locus": { "chromosome": "3", "start_pos": 110275065, "end_pos": 110231020, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093612.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093612.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078859.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078859.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 53, "start_aa": "Thr", "end_pos": 53, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr53", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 590, "start_aa": "Thr", "end_pos": 590, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr590", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FB97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FB97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97" } ], "pmid": "" }, { "name": "cytoplasmic microtubule", "id": "GO:0005881", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005881", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FB97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FB97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FB97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 580, "end_pos": 582, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A8W4FB97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FB97" }, { "id": "SM01349", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01349" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TOG", "eco_id": "ECO_0000259", "start_pos": 478, "end_pos": 707, "start_aa": "Glu", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 53, 590 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 580, "end_pos": 582 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FBA0-1", "uniprot_ac": "A0A8W4FBA0", "uniprot_id": "A0A8W4FBA0_PIG", "mass": { "chemical_mass": 23071.0, "monoisotopic_mass": 23071.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A8W4FBA0", "database": "UniProtKB", "url": 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"XP_020919846", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919846" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LINGO2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2", "locus": { "chromosome": "10", "start_pos": 38028782, "end_pos": 38026962, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000062233", "url": "https://www.ensembl.org/id/ENSSSCG00000062233" } ] } } ], "crossref": [ { "id": "A0A8W4FBD2", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FBD2", "database": "AlphaFoldDB", "categories": [] }, { "id": "100622878", "url": "https://www.ncbi.nlm.nih.gov/gene/100622878", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000372", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000372", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050541", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050541", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622878", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622878", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TKAVVCH", "url": "https://omabrowser.org/oma/group/TKAVVCH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4FBD2", "url": "https://www.orthodb.org/?gene=A0A8W4FBD2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369:SF156", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369:SF156", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020919846", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919846", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLHTAISCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWILQRHPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECNADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGIYVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVAEGEVAGPRRFNMKMI", "length": 606, "header": "tr|A0A8W4FBD2-1|A0A8W4FBD2_PIG Isoform 1 of Leucine rich repeat and Ig domain containing 2 OS=Sus scrofa OX=9823 GN=LINGO2 PE=4 SV=1 CANONICAL=A0A8W4FBD2-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FBD2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2/entry#A0A8W4FBD2-1", "sequence": { "sequence": "MLHTAISCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWILQRHPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECNADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGIYVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVAEGEVAGPRRFNMKMI", "length": 606, "header": "tr|A0A8W4FBD2-1|A0A8W4FBD2_PIG Isoform 1 of Leucine rich repeat and Ig domain containing 2 OS=Sus scrofa OX=9823 GN=LINGO2 PE=4 SV=1 CANONICAL=A0A8W4FBD2-1" }, "locus": { "chromosome": "10", "start_pos": 38028779, "end_pos": 38026962, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097020.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097020.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076706.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076706.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622878", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622878", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XM05-1", "protein_name": "Leucine rich repeat and Ig domain containing 2", "gene_name": "", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLHTAVSCWQPFLGLAVLLVFMGPTFGCPARCECSAQNKSVSCHRRRLLSIPEGIPIETKILDLSKNRLKSVNPEEFMSYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLERCNLTAVPTEALSHLHNLISLHLKQLNINALPAYAFKRLFRLKDLEIDSWPLLDMLPANSLYGLNLTSLSITNTNLSAVPYTAFKHLVYLTHLNLSFNPISTIEAGMLSDLVRLQELHMVGAQLRTIEPHAFQGLRFLRVLNVSQNLLETLEENVFHSPKALEILCINNNPLACDCRLLWILQRQPTLQFGGQPPMCAGPDSVKERSFKDFHSTALSFYFTCKKPRIQDKKLQYLVVEEGQTVQLMCNADGDPQPTISWVTPRRRLITTKSNGRATVLGDGTLEIRFAQDQDTGIYVCIASNAAGNDTYSASLTVKGFTSDRFLYANRTPMYMTDSNDTSSNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKTSIDLEYVPRKNNGAVVEGEVAGPRRFNMKMI", "length": 606 }, "evidence": [ { "id": "A0A8W4FBD2", "url": "https://omabrowser.org/oma/group/A0A8W4FBD2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9SHP1-1", "protein_name": "Leucine rich repeat and Ig domain containing 2", "gene_name": "LINGO2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLHTALSCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSITNTNLSTIPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLTCDCRLLWILQRHPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECNADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFTASLTVKGFASDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRRFNMKMI", "length": 606 }, "evidence": [ { "id": "A0A8W4FBD2", "url": "https://omabrowser.org/oma/group/A0A8W4FBD2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "M0R752-1", "protein_name": "Leucine rich repeat and Ig domain containing 2", "gene_name": "Lingo2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLHTAIPCWQPFLGLAMVLLFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLFSLEQLTLEKCNLTAVPTEALSHLRSLITLHLKHLNINNMPVYAFKRLFHLKQLEIDYWPLLDMMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHVVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWLLQRQATLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECNADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTVSNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVAEGEVAGPRRFNMKMI", "length": 606 }, "evidence": [ { "id": "A0A8W4FBD2", "url": "https://omabrowser.org/oma/group/A0A8W4FBD2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3URE9-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2", "gene_name": "Lingo2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLHTAIPCWQPFLGLAVVLLLMGSTIGCPARCECSAQNKSVSCHRRRLLAIPEGIPIETKILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWLLQRQPNLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECNADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTVSNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRRFNMKMI", "length": 606 }, "evidence": [ { "id": "A0A8W4FBD2", "url": "https://omabrowser.org/oma/group/A0A8W4FBD2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7L985-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2", "gene_name": "LINGO2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLHTAISCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECSADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFTASLTVKGFASDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRRFNMKMI", "length": 606 }, "evidence": [ { "id": "A0A8W4FBD2", "url": "https://omabrowser.org/oma/group/A0A8W4FBD2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2" } ], "pmid": "" }, { "name": "postsynaptic density membrane", "id": "GO:0098839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098839", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "synaptic membrane adhesion", "id": "GO:0099560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099560", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cell-cell adhesion mediator activity", "id": "GO:0098632", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098632", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBD2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBD2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 130, "end_pos": 132, "annotation": "n_glycosylation_sequon" }, { "start_pos": 188, "end_pos": 190, "annotation": "n_glycosylation_sequon" }, { "start_pos": 250, "end_pos": 252, "annotation": "n_glycosylation_sequon" }, { "start_pos": 260, "end_pos": 262, "annotation": "n_glycosylation_sequon" }, { "start_pos": 279, "end_pos": 281, "annotation": "n_glycosylation_sequon" }, { "start_pos": 327, "end_pos": 329, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" }, { "start_pos": 491, "end_pos": 493, "annotation": 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"https://www.uniprot.org/uniprotkb/A0A8W4FBT1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBT1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "GIAVGQQNFHMSDSISLVSPQKFNSYTLTAGMNCVLATYGGIALRVLYFDIVPNHPKVETTQMSIS", "length": 66, "header": "tr|A0A8W4FBT1-1|A0A8W4FBT1_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FBT1-1" }, "isoforms": [ { "isoform_ac": "A0A287AMF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT1/entry#A0A287AMF0-1", "sequence": { "sequence": "GSAPGSQCRSDSISLVSPQKFNSYTLTAGMNCVLATYGGIALRVLYFDIVPNHPKVETTQMSIS", "length": 64, "header": "tr|A0A287AMF0-1|A0A287AMF0_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A8W4FBT1-1" }, "locus": { "chromosome": "6", "start_pos": 48745385, "end_pos": 48743655, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041327.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041327.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045063.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045063.2" } ] } }, { "isoform_ac": "A0A8W4FBT1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT1/entry#A0A8W4FBT1-1", "sequence": { "sequence": "GIAVGQQNFHMSDSISLVSPQKFNSYTLTAGMNCVLATYGGIALRVLYFDIVPNHPKVETTQMSIS", "length": 66, "header": "tr|A0A8W4FBT1-1|A0A8W4FBT1_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FBT1-1" }, "locus": { "chromosome": "6", "start_pos": 48745385, "end_pos": 48744285, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103799.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103799.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076852.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076852.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"https://www.ncbi.nlm.nih.gov/protein/XP_020942394" }, "gene_names": [ { "name": "FLYWCH1", "type": "recommended", "evidence": [ { "id": "A0A8W4FBT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4" } ] }, { "name": "FLYWCH1", "type": "synonym", "evidence": [ { "id": "XP_020942394", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942394" } ] } ], "protein_names": [ { "name": "FLYWCH-type zinc finger-containing protein 1", "type": "recommended", "evidence": [ { "id": "A0A8W4FBT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4/entry#names_and_taxonomy" } ] }, { "name": "FLYWCH-type zinc finger-containing protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020942394", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942394" } ] } ], "function": [ { "annotation": "Transcription cofactor. Negatively regulates transcription activation by catenin beta-1 CTNNB1, perhaps acting by competing with TCF4 for CTNNB1 binding. May play a role in DNA-damage response signaling. Binds specifically to DNA sequences at peri-centromeric chromatin loci.", "evidence": [ { "database": "UniProtKB", "id": "I3L8D5", "url": "https://www.uniprot.org/uniprotkb/I3L8D5#function" }, { "database": "UniProtKB", "id": "ARBA00056066", "url": "https://www.uniprot.org/uniprotkb/ARBA00056066#function" }, { "database": "UniProtKB", "id": "A0A8W4FBT4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FLYWCH1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4", "locus": {} } ], "crossref": [ { "id": "A0A8W4FBT4", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FBT4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028381", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028381", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100736802", "url": "https://www.ncbi.nlm.nih.gov/gene/100736802", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007588", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007588", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029279", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029279", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040312", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040312", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100736802", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736802", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NLAQWEG", "url": "https://omabrowser.org/oma/group/NLAQWEG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4FBT4", "url": "https://www.orthodb.org/?gene=A0A8W4FBT4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31665", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31665", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31665:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31665:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04500", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04500", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15423", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15423", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16662", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16662", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020942394", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942394", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FBT4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBT4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8D5", "url": "https://www.uniprot.org/uniprotkb/I3L8D5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8D5-1", "url": "https://www.uniprot.org/uniprotkb/I3L8D5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPLPEPSEQEGESVKAGQEPCPESPEPGTDVVPEAPTKPKFSKLILLVASDSGDGEDCVMSLEMSDPDALAGTPQILPAEKQGEAVQPSPQAPEQNHSKPDPAAPKPLEFLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCREHSELGCRGRAITRGPRATVMRGHCHPPDEEGLEARRQRQKKLPSPALQEDPQVEEPREGVGPGLDAKEPEPTPGPPLSKPAPEEDKGLRALSLLRLPPKKRPTLGAGGPPPLEFLRTCYGGSFLVHQSFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRVTVMRGHCHPPDVEGLEARRQQEKAIESLQARPGGPGGSGDKLLQGVDSLFYRRGAGTLTLTRPRPRKRLKVKDEGLPDQPQALQGSPAEDQDEDPGGPEFLRTPLGGSFLVYESFLYRREKAAGDKVYWTCRDQARMGCRSRAITQGRRVTVMRGHCHPPDLGGLEALRQREKCPGSAHRESSGGTEFLKTPLGGSFLVYESFLYRREKAAGDKVYWTCRDQARMGCRSRAITQGQRVMVMRRHCHPPDLAGLEALRQREQLPCLAQRDGSEPLQPLEFLRTSLGGRFLVYESFLYRKEKAAGDKIYWMCRDQARMGCRSRAITQGQQVTVMRGHCHSPDLAGLEALRQRERLPSPPQQEDPEKIQLLPEAQLCFETCSPENQESYGKVEDTRLDSQAQ", "length": 706, "header": "tr|A0A8W4FBT4-1|A0A8W4FBT4_PIG Isoform 1 of FLYWCH-type zinc finger-containing protein 1 OS=Sus scrofa OX=9823 GN=FLYWCH1 PE=4 SV=1 CANONICAL=A0A8W4FBT4-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FBT4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4/entry#A0A8W4FBT4-1", "sequence": { "sequence": "MPLPEPSEQEGESVKAGQEPCPESPEPGTDVVPEAPTKPKFSKLILLVASDSGDGEDCVMSLEMSDPDALAGTPQILPAEKQGEAVQPSPQAPEQNHSKPDPAAPKPLEFLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCREHSELGCRGRAITRGPRATVMRGHCHPPDEEGLEARRQRQKKLPSPALQEDPQVEEPREGVGPGLDAKEPEPTPGPPLSKPAPEEDKGLRALSLLRLPPKKRPTLGAGGPPPLEFLRTCYGGSFLVHQSFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRVTVMRGHCHPPDVEGLEARRQQEKAIESLQARPGGPGGSGDKLLQGVDSLFYRRGAGTLTLTRPRPRKRLKVKDEGLPDQPQALQGSPAEDQDEDPGGPEFLRTPLGGSFLVYESFLYRREKAAGDKVYWTCRDQARMGCRSRAITQGRRVTVMRGHCHPPDLGGLEALRQREKCPGSAHRESSGGTEFLKTPLGGSFLVYESFLYRREKAAGDKVYWTCRDQARMGCRSRAITQGQRVMVMRRHCHPPDLAGLEALRQREQLPCLAQRDGSEPLQPLEFLRTSLGGRFLVYESFLYRKEKAAGDKIYWMCRDQARMGCRSRAITQGQQVTVMRGHCHSPDLAGLEALRQRERLPSPPQQEDPEKIQLLPEAQLCFETCSPENQESYGKVEDTRLDSQAQ", "length": 706, "header": "tr|A0A8W4FBT4-1|A0A8W4FBT4_PIG Isoform 1 of FLYWCH-type zinc finger-containing protein 1 OS=Sus scrofa OX=9823 GN=FLYWCH1 PE=4 SV=1 CANONICAL=A0A8W4FBT4-1" }, "locus": { "chromosome": "3", "start_pos": 39238071, "end_pos": 39226363, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099445.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099445.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076857.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076857.1" } ] } }, { "isoform_ac": "I3L8D5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4/entry#I3L8D5-1", "sequence": { "sequence": "MPLPEPSEQEGESVKAGQEPCPESPEPGTDVVPEAPTKPKFSKLILLVASDSGDGEDCVMSLEMSDPDALAGTPQILPAEKQGEAVQPSPQAPEQNHSKPDPAPKPLEFLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCREHSELGCRGRAITRGPRATVMRGHCHPPDEEGLEARRQRQKKLPSPALQEDPQVEEPREGVGPGLDAKEPEPTPGPPLSKPAPEEDKGLRALSLLRLPPKKRPTLGAGGPPPLEFLRTCYGGSFLVHQSFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRVTVMRGHCHPPDVEGLEARRQQEKAIESLQARPGGPGGSGDKLLQGVDSLFYRRGAGTLTLTRPRPRKRLKVKDEGLPDQPQALQGSPAEDQDEDPGGPEFLRTPLGGSFLVYESFLYRREKAAGDKVYWTCRDQARMGCRSRAITQGRRVTVMRGHCHPPDLGGLEALRQREKCPGSAHRESSGGTEFLKTPLGGSFLVYESFLYRREKAAGDKVYWTCRDQARMGCRSRAITQGQRVMVMRRHCHPPDLAGLEALRQREQLPCLAQRDGSEPLQPLEFLRTSLGGRFLVYESFLYRKEKAAGDKIYWMCRDQARMGCRSRAITQGQQVTVMRGHCHSPDLAGLEALRQRERLPSPPQQEDPEKIQLLPEAQLCFETCSPENQESYGKVEDTRLDSQAQ", "length": 705, "header": "tr|I3L8D5-1|A0A8W4FBT4_PIG Computationally mapped isoform of FLYWCH-type zinc finger-containing protein 1 OS=Sus scrofa OX=9823 GN=FLYWCH1 PE=4 SV=3 CANONICAL=A0A8W4FBT4-1" }, "locus": { "chromosome": "3", "start_pos": 39238071, "end_pos": 39226363, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030725.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030725.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020295.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020295.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 155, "start_aa": "Thr", "end_pos": 155, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr155", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 215, "start_aa": "Thr", "end_pos": 215, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr215", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8D5", "url": "https://www.uniprot.org/uniprotkb/I3L8D5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736802", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736802", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F7FDF2-1", "protein_name": "FLYWCH-type zinc finger-containing protein 1", "gene_name": "Flywch1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPLPEPSEQEGESLRAGQEPSRGARKPQESSSLVPARDKEKPKPTDVMSQETSSTTTLPNNTLQALPAKKQGRIIHRKRSRVDAVAPQPLEFLKTPSGSRLLVHKSFLYKQEKAVGDKVYWKCRQHSELGCRGRAITRGFRVTEMRDHCHPPEKEGLGKKRRQKEKLPSSGTEGQGDGVSLWLYPVEPEPTPQPSIETPEEEQGYRSLALQSLPPKKRPTPGVVRYRPLEFLKTCYGGTFLVHQSFLYKREKTVGSKVYWTCREHAVHGCRSRAITQGQRVTVMRSHCHSPDMEGLQARRQQEKTIKKIQARRIGAGDLEDCDDIEDTLLQGVDSLFYRRGPGTLTLSRSRSRKRAKKQQEPLQESPEEEDQDVDPKGPEFLKTPLGGNFLVYESFLYRREKVAGEKVYWTCRDQARMGCRSRAITQGRQVTVMRGHCHPPDLLGLETLRQRQKRPGPAQWDGPEGPEFLKTPLGGSFLVYESFLYRREKATGDKVYWTCRDQARMGCRSRAITQGQRVMVMRRHCHPPDMGGLEALRQRENFPNLTHWEGPEPVQPLEFLQTSLGGRFLVYESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQGRRVMVMRSHCHSPDLAGLEALRQREREKAREREKAREREKAPSAAKKKKKKKKKKGKSKS", "length": 667 }, "evidence": [ { "id": "A0A8W4FBT4", "url": "https://omabrowser.org/oma/group/A0A8W4FBT4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4VC44-1", "protein_name": "FLYWCH-type zinc finger-containing protein 1", "gene_name": "FLYWCH1", "tax_id": 9606, 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"common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4" } ], "pmid": "" }, { "name": "chromosome, centromeric region", "id": "GO:0000775", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000775", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 96, "end_pos": 98, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A8W4FBT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT4" }, { "id": "PF04500", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04500" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FLYWCH-type", "eco_id": "ECO_0000259", "start_pos": 110, "end_pos": 168, "start_aa": "Phe", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A8W4FBT4", "database": "UniProtKB", "url": 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"count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FBT6-1", "uniprot_ac": "A0A8W4FBT6", "uniprot_id": "A0A8W4FBT6_PIG", "mass": { "chemical_mass": 33602.0, "monoisotopic_mass": 33602.0 }, "refseq": {}, "gene_names": [ { "name": "OR56B1", "type": "recommended", "evidence": [ { "id": "A0A8W4FBT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6" } ] } ], "protein_names": [ { "name": "Olfactory receptor family 56 subfamily B member 1", "type": "synonym", "evidence": [ { "id": "A0A8W4FBT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBT6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OR56B1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6", "locus": { "chromosome": "9", "start_pos": 4082655, "end_pos": 4083563, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000055259", "url": "https://www.ensembl.org/id/ENSSSCG00000055259" } ] } } ], "crossref": [ { "id": "A0A8W4FBT6", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FBT6", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd15223", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15223", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050402", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050402", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR26450", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26450", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR26450:SF69", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26450:SF69", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FBT6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "SNSSQFQVSEFILMGFPGIHSWQHWLSLPLAVLYLLAIGANVLILITICQDPALQQPMYHFLGILSVVDIGLATTIMPKILAIFWFDAKVISLPECFAQIYAIHCFVGMESGIFLCMAFDRYVAICHPLHYPSVVTNAFILKATLFMVLRNGLLVIPVPVLAAQRHYCSRNEIEHCLCSNLGVTSLACDDWKPNSICQLVLAWLGMGSDLSLIILSYTQILRSVLRLNSAEASSKALSTCSSHLILILFFYTVVVVISVTHLAETKATLTPVLLNVLHNVIPPSLNPMVYALRTKELRAGFQR", "length": 303, "header": "tr|A0A8W4FBT6-1|A0A8W4FBT6_PIG Isoform 1 of Olfactory receptor family 56 subfamily B member 1 OS=Sus scrofa OX=9823 GN=OR56B1 PE=3 SV=1 CANONICAL=A0A8W4FBT6-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FBT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBT6/entry#A0A8W4FBT6-1", "sequence": { "sequence": "SNSSQFQVSEFILMGFPGIHSWQHWLSLPLAVLYLLAIGANVLILITICQDPALQQPMYHFLGILSVVDIGLATTIMPKILAIFWFDAKVISLPECFAQIYAIHCFVGMESGIFLCMAFDRYVAICHPLHYPSVVTNAFILKATLFMVLRNGLLVIPVPVLAAQRHYCSRNEIEHCLCSNLGVTSLACDDWKPNSICQLVLAWLGMGSDLSLIILSYTQILRSVLRLNSAEASSKALSTCSSHLILILFFYTVVVVISVTHLAETKATLTPVLLNVLHNVIPPSLNPMVYALRTKELRAGFQR", "length": 303, "header": "tr|A0A8W4FBT6-1|A0A8W4FBT6_PIG Isoform 1 of Olfactory receptor family 56 subfamily B member 1 OS=Sus scrofa OX=9823 GN=OR56B1 PE=3 SV=1 CANONICAL=A0A8W4FBT6-1" }, "locus": { "chromosome": "9", "start_pos": 4083563, "end_pos": 4082655, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097960.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097960.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076727.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076727.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., 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"100521020", "url": "https://www.ncbi.nlm.nih.gov/gene/100521020", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006608", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006608", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037772", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037772", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR13076", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13076", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13076:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13076:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21528", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21528", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9668328", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9668328", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5K1TX87", "url": "https://www.uniprot.org/uniprotkb/A0A5K1TX87", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1TX87-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1TX87-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6H6", "url": "https://www.uniprot.org/uniprotkb/F1S6H6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6H6-1", "url": "https://www.uniprot.org/uniprotkb/F1S6H6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "KMPGPRPRKGPQASGQGVAAAKQLGLFVEFNPEDVLLGAEETEDDGDLEAELLALTGEAGTTGRKPAPKGQAPLPMAHIEKLAADCMRDVEEEEEEEDGLEEDADLLTELQEVLGADEEAVPMDDNETASPGDSEEEKGQENIEPPVQTACLTAPVPAAQAGGPQGLQALLEDRIHNYREAAASAKEAGEAAKARRCERGLKTLESQLAAVRKGRKINEDEIPPPVALGRRPLVPQETTNRNPEAESPAPPATGPDSPSQPETSLLGSPGVSAPPDSDPDLRALLLARQREYKVAALNAKRAGDLDHARELMRIGKRVGVILEALEKGQPVDLNALPPAPEDLKPLPQASNAPTAPSVVSPAVERVQPVMAADIPATPVAPAEPQTVLDALQQRLNKYREAGVQARGSGDERKARMHERIAKQYQDAIRAHRAGRKVDFAELPVPPGFPPIPGLEPTLGPEEDVVAATLAAAQKLASSEDTAPAEDDEDADKPPGHLQDELPTQAPLAKKPAQPRVPSSRPLPEPKASRSKELLSPSVGEQLALLEARKLQYQRAALKAKRGQDLEQAKAHLRVAKCLEAQIIQVRAGRPVDLSKVPSPLTDEESDFILIHHEDLRLSQKAEEVYAQLQKLLLEQHEKCLLFSKQFMHQGNVAETTRFEKLAQDRSKQLEILQLAQAQGLDPPSHHFELRTFQTVRIFAELNSTEMHLLIVRGMNLPAPPGVTPDDLDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFRRVIQSKGIKFEIFHKGSFFRSDKLVGTAHLKLERLEHECEIREIVEVLDGRKPTGGKLEVKVRLREPLSGQDVQTVTENWLVLEPRGL", "length": 863, "header": "tr|A0A8W4FCW9-1|A0A8W4FCW9_PIG Isoform 1 of Coiled-coil and C2 domain-containing protein 1B OS=Sus scrofa OX=9823 GN=CC2D1B PE=1 SV=1 CANONICAL=A0A8W4FCW9-1" }, "isoforms": [ { "isoform_ac": "A0A5K1TX87-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9/entry#A0A5K1TX87-1", "sequence": { "sequence": "MAHIEKLAADCMRDVEEEEEEEDGLEEDADLLTELQEVLGADEEAVPMDDNETASPGDSEEEKGQENIEPPVQTACLTAPVPAAQAGGPQGLQALLEDRIHNYREAAASAKEAGEAAKARRCERGLKTLESQLAAVRKGRKINEDEIPPPVALGRRPLVPQETTNRNPEAESPAPPATGPDSPSQPETSLLGSPGVSAPPDSDPDLRALLLARQREYKVAALNAKRAGDLDHARELMRIGKRVGVILEALEKGQPVDLNALPPAPEDLKPLPQASNAPTAPSVVSPAVERVQPVMAADIPATPVAPAEPQTVLDALQQRLNKYREAGVQARGSGDERKARMHERIAKQYQDAIRAHRAGRKVDFAELPVPPGFPPIPGLEPTLGPEEDVVAATLAAAQKLASSEDTAPAEDDEDADKDELPTQAPLAKKPAQPRVPSSRPLPEPKASRSKELLSPSVGEQLALLEARKLQYQRAALKAKRGQDLEQAKAHLRVAKCLEAQIIQVRAGRPVDLSKVPSPLTDEESDFILIHHEDLRLSQKAEEVYAQLQKLLLEQHEKCLLFSKQFMHQGNVAETTRFEKLAQDRSKQLEILQLAQAQGLDPPSHHFELRTFQTVRIFAELNSTEMHLLIVRGMNLPAPPGVTPDDLDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFRRVIQSKGIKFEIFHKGSFFRSDKLVGTAHLKLERLEHECEIREIVEVLDGRKPTGGKLEVKVRLREPLSGQDVQTVTENWLVLEPRGL", "length": 782, "header": "tr|A0A5K1TX87-1|A0A5K1TX87_PIG Computationally mapped isoform of Coiled-coil and C2 domain-containing protein 1B OS=Sus scrofa OX=9823 GN=CC2D1B PE=1 SV=2 CANONICAL=A0A8W4FCW9-1" }, "locus": { "chromosome": "6", "start_pos": 159867399, "end_pos": 159859335, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023805.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023805.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023492.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023492.4" } ] } }, { "isoform_ac": "A0A8W4FCW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9/entry#A0A8W4FCW9-1", "sequence": { "sequence": "KMPGPRPRKGPQASGQGVAAAKQLGLFVEFNPEDVLLGAEETEDDGDLEAELLALTGEAGTTGRKPAPKGQAPLPMAHIEKLAADCMRDVEEEEEEEDGLEEDADLLTELQEVLGADEEAVPMDDNETASPGDSEEEKGQENIEPPVQTACLTAPVPAAQAGGPQGLQALLEDRIHNYREAAASAKEAGEAAKARRCERGLKTLESQLAAVRKGRKINEDEIPPPVALGRRPLVPQETTNRNPEAESPAPPATGPDSPSQPETSLLGSPGVSAPPDSDPDLRALLLARQREYKVAALNAKRAGDLDHARELMRIGKRVGVILEALEKGQPVDLNALPPAPEDLKPLPQASNAPTAPSVVSPAVERVQPVMAADIPATPVAPAEPQTVLDALQQRLNKYREAGVQARGSGDERKARMHERIAKQYQDAIRAHRAGRKVDFAELPVPPGFPPIPGLEPTLGPEEDVVAATLAAAQKLASSEDTAPAEDDEDADKPPGHLQDELPTQAPLAKKPAQPRVPSSRPLPEPKASRSKELLSPSVGEQLALLEARKLQYQRAALKAKRGQDLEQAKAHLRVAKCLEAQIIQVRAGRPVDLSKVPSPLTDEESDFILIHHEDLRLSQKAEEVYAQLQKLLLEQHEKCLLFSKQFMHQGNVAETTRFEKLAQDRSKQLEILQLAQAQGLDPPSHHFELRTFQTVRIFAELNSTEMHLLIVRGMNLPAPPGVTPDDLDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFRRVIQSKGIKFEIFHKGSFFRSDKLVGTAHLKLERLEHECEIREIVEVLDGRKPTGGKLEVKVRLREPLSGQDVQTVTENWLVLEPRGL", "length": 863, "header": "tr|A0A8W4FCW9-1|A0A8W4FCW9_PIG Isoform 1 of Coiled-coil and C2 domain-containing protein 1B OS=Sus scrofa OX=9823 GN=CC2D1B PE=1 SV=1 CANONICAL=A0A8W4FCW9-1" }, "locus": { "chromosome": "6", "start_pos": 159867399, "end_pos": 159856864, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093837.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093837.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077244.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077244.1" } ] } }, { "isoform_ac": "F1S6H6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9/entry#F1S6H6-1", "sequence": { "sequence": "MPGPRPRKGPQASGQGVAAAKQLGLFVEFNPEDVLLGAEETEDDGDLEAELLALTGEAGTTGRKPAPKGQAPLPMAHIEKLAADCMRDVEEEEEEEDGLEEDADLLTELQEVLGADEEAVPMDDNETASPGDSEEEKGQENIEPPVQTACLTAPVPAAQAGGPQGLQALLEDRIHNYREAAASAKEAGEAAKARRCERGLKTLESQLAAVRKGRKINEDEIPPPVALGRRPLVPQETTNRNPEAESPAPPATGPDSPSQPETSLLGSPGVSAPPDSDPDLRALLLARQREYKVAALNAKRAGDLDHARELMRIGKRVGVILEALEKGQPVDLNALPPAPEAPSVVSPAVERVQPVMAADIPATPVAPAEPQTVLDALQQRLNKYREAGVQARGSGDERKARMHERIAKQYQDAIRAHRAGRKVDFAELPVPPGFPPIPGLEPTLGPEEDVVAATLAAAQKLASSEDTAPAEDDEDADKDELPTQAPLAKKPAQPRVPSSRPLPEPKASRSKELLSPSVGEQLALLEARKLQYQRAALKAKRGQDLEQAKAHLRVAKCLEAQIIQVRAGRPVDLSKVPSPLTDEESDFILIHHEDLRLSQKAEEVYAQLQKLLLEQHEKCLLFSKQFMHQGNVAETTRFEKLAQDRSKQLEILQLAQAQGLDPPSHHFELRTFQTVRIFAELNSTEMHLLIVRGMNLPAPPGVTPDDLDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFRRVIQSKGIKFEIFHKGSFFRSDKLVGTAHLKLERLEHECEIREIVEVLDGRKPTGGKLEVKVRLREPLSGQDVQTVTENWLVLEPRGL", "length": 843, "header": "tr|F1S6H6-1|A0A8W4FCW9_PIG Computationally mapped isoform of Coiled-coil and C2 domain-containing protein 1B OS=Sus scrofa OX=9823 GN=CC2D1B PE=1 SV=3 CANONICAL=A0A8W4FCW9-1" }, "locus": { "chromosome": "6", "start_pos": 159867399, "end_pos": 159856867, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049292.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049292.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036685.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036685.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 723, "start_aa": "Thr", "end_pos": 723, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr723", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S6H6", "url": "https://www.uniprot.org/uniprotkb/F1S6H6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9668328", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9668328", "resource": "Reactome", "description": "Sealing of the nuclear envelope (NE) by ESCRT-III" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCW9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 126, "end_pos": 128, "annotation": "n_glycosylation_sequon" }, { "start_pos": 702, "end_pos": 704, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A8W4FCW9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCW9" }, { 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Laminin G domain-containing protein OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A8W4FCZ3-1" }, "locus": { "chromosome": "1", "start_pos": 33827873, "end_pos": 33766955, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094699.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094699.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076723.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076723.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 372, "start_aa": "Thr", "end_pos": 372, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr372", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { 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"https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCZ3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCZ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": 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}, { "id": "PF25508", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25508", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3295583", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3295583", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4FD09", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FD09-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD09-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDN3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDN3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDN3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDN3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1161, "header": "tr|A0A8W4FD09-1|A0A8W4FDN3_PIG Computationally mapped isoform of Transient receptor potential cation channel subfamily M member 5 OS=Sus scrofa OX=9823 GN=TRPM5 PE=4 SV=2 CANONICAL=A0A8W4FDN3-1" }, "locus": { "chromosome": "2", "start_pos": 1661133, "end_pos": 1647163, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092420.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092420.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076194.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076194.1" } ] } }, { "isoform_ac": "A0A8W4FDN3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDN3/entry#A0A8W4FDN3-1", "sequence": { "sequence": "MQDAGGVCSGGPGGAGDRWGPGLLRGEIEFGGSGKKRGKFVKVPSSVAPSVLFDLLLAEWHLPAPNLVVSLVGEERPFAVKSWLRDVLRKGLVKAAQSTGAWILTSALRVGLARYVGQAVRDQSLASTSTKARVVAIGIAPLGRVLHRQLLDDAQEDSPVRYPMDDSGGQGPLCPLDNNHSHFILVEPGPPGKGDGPTELRLRLERHISEQRTGYGGTSSIEIPVLCLLVNGDPSTLERISRAVEHAAPWLILAGSGGVADVLAALMHQPQLLVPQVAEKQLREKFPSEHFSREDILHWTALLQNIASHPHLLTVHDFEQEGSEELDTVILKALVKACKSHSQEAQDYLDELKLAVAWDRVDIAKSEIFNGDVEWKSHDLEEVLMDALVNNKPEFVRLLVDNGADVADFLTYGRLQQLYRSVRPKSLLFDLLQRKLEEGRLTLGLGAQPAREPPAGPPAFSLHEVSRVLKDFLHDACRGLYQAERGPARRPPGQKGLLDLTQRSENPWRDLFLWAVLQNRHEMATYFWAMGQEGVAAALAACKILKEMAHLETEAAAGRTLCQAKYEQLALDLFSECYGNSEERAFALLVRRNRSWSRTTCLHLATEADAKAFFAHDGVQAFLTRIWWGDMASGTPVLRLLAAFLCPALIYTNLITFREEAPLRTGLEDLQELDSLDTEKSLLCSPGSRAEARAVAPRTRGSRGPHAAFLLTRWRKFWGAPVTVFLGNVLMYFAFLFLFSYVLLVDFRPPPQGPSGPEVTLYFWVFTLVLEEIRQGFFTDEDTHLVKKVMLYVEDNWNKCDMGAIFLFIAGVTCRVLPSGFEAGRTILAVDFMVFALRLIHIFAIHKQLGPKIIIVERMMRDVFFFLFFLSVWLVAYGVTTQALLHPHDGRLEWIFRRVLYRPYLQIFGQIPLDEIDEARVNCSVHPLLLEGSPSCPNLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYHLIVEYHERPALAPPFILLSHLSLLLKRVFRKEAAQKRAHLERDLPEPLDQKVVTWEAVQKENALGKLEKQRKDSGEELLRKTAHSLLPTCFCHRVDSVAKYLGALREQERRVKRLESQVNYCTVLLSSVADTLAQGSAYWSECVCPHKSWGPVGSVGTGNPLPARWPGGRGPGAVLRPLLQASASHLPWEGTPCSLMALGRPPSSGRGGGL", 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"field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FD18-1", "uniprot_ac": "A0A8W4FD18", "uniprot_id": "A0A8W4FD18_PIG", "mass": { "chemical_mass": 34718.0, "monoisotopic_mass": 34718.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "LINE-1 type transposase domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "A0A8W4FD18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD18/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FD18", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD18" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD18", "locus": {} } ], "crossref": [ { "id": "A0A8W4FD18", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FD18", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR004244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035300", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035301", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035301", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043636", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043636", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11505", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11505", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02994", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02994", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17489", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17489", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17490", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17490", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FD18", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FD18-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD18-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKKLRNHPQSNQQENSPKTVNNETDLYSQTDLEFKREILKILKELREDMNSNADTLRKELENITRSQEKLQHAFAEMQTELGTVKTRMNNAEERISDMEDRIMEITQSGQQTENRIKKLESNIRDLWDNIKRANLRIIGIPEGVEKDKGMENIFEEIIDGNFPNLKDTGFKIQEAQRAPNKLNPNRPTPRHIIIKMAKVSDKERILKAAREKQNVTYKGTPIRLSSDFSTETLQARREWQEIFKVLKGKNMQPRILYPARISFKIEGEIKIFSNKQKLKEYSNTKPRLKEILKGLL", "length": 296, "header": "tr|A0A8W4FD18-1|A0A8W4FD18_PIG Isoform 1 of LINE-1 type transposase domain-containing protein 1 OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A8W4FD18-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FD18-1", "url": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FDC7-1", "uniprot_ac": "A0A8W4FDC7", "uniprot_id": "A0A8W4FDC7_PIG", "mass": { "chemical_mass": 34907.0, "monoisotopic_mass": 34907.0 }, "refseq": { "ac": "NP_001230593", "name": "probable inactive peptidyl-prolyl cis-trans isomerase-like 6", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230593" }, "gene_names": [ { "name": "PPIL6", "type": "recommended", "evidence": [ { "id": "A0A8W4FDC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7" } ] }, { "name": "PPIL6", "type": "synonym", "evidence": [ { "id": "NP_001230593", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230593" } ] } ], "protein_names": [ { "name": "Probable inactive peptidyl-prolyl cis-trans isomerase-like 6", "type": "recommended", "evidence": [ { "id": "A0A8W4FDC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7/entry#names_and_taxonomy" } ] }, { "name": "Cyclophilin-like protein PPIL6", "type": "synonym", "evidence": [ { "id": "A0A8W4FDC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7/entry#names_and_taxonomy" } ] }, { "name": "peptidyl-prolyl cis-trans isomerase-like 6", "type": "synonym", "evidence": [ { "id": "NP_001230593", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230593" } ] }, { "name": "peptidylprolyl isomerase (cyclophilin)-like 6", "type": "synonym", "evidence": [ { "id": "NP_001230593", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230593" } ] }, { "name": "probable inactive peptidyl-prolyl cis-trans isomerase-like 6", "type": "synonym", "evidence": [ { "id": "NP_001230593", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230593" } ] } ], "function": [ { "annotation": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.", "evidence": [ { "database": "UniProtKB", "id": "F1RZP8", "url": "https://www.uniprot.org/uniprotkb/F1RZP8#function" }, { "database": "UniProtKB", "id": "RU363019", "url": "https://www.uniprot.org/uniprotkb/RU363019#function" } ] }, { "annotation": "Probable inactive PPIase with no peptidyl-prolyl cis-trans isomerase activity.", "evidence": [ { "database": "UniProtKB", "id": "F1RZP8", "url": "https://www.uniprot.org/uniprotkb/F1RZP8#function" }, { "database": "UniProtKB", "id": "ARBA00058445", "url": "https://www.uniprot.org/uniprotkb/ARBA00058445#function" }, { "database": "UniProtKB", "id": "A0A8W4FDC7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDC7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPIL6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7", "locus": { "chromosome": "1", "start_pos": 75463222, "end_pos": 75508244, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004413", "url": "https://www.ensembl.org/id/ENSSSCG00000004413" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004413", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004413", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100157379", "url": "https://www.ncbi.nlm.nih.gov/gene/100157379", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157379", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157379", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ECKIINC", "url": "https://omabrowser.org/oma/group/ECKIINC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4FDC7", "url": "https://www.orthodb.org/?gene=A0A8W4FDC7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11071", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11071", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11071:SF561", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11071:SF561", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00160", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00160", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001230593", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230593", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "16237", "url": "https://www.rhea-db.org/rhea/16237", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4FDC7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDC7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RZP8", "url": "https://www.uniprot.org/uniprotkb/F1RZP8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RZP8-1", "url": "https://www.uniprot.org/uniprotkb/F1RZP8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASQRLSVPCSSQLPPEQPLQVKVVGLFKSSSFQVAKSTAESLKRNYPSKFEDPIIVPVQEFAWDQYLQEKKRELKNEIWEYSSYVMCFINDQLLGDALDLQKWAHKVWDIVDFKPPALYEALTLDYSTKFLRDTKHDFVFLDISIDLYPVGRLIFELYCDTCPKTCKNFQVLCTGKAGFSQSGIRLHYAGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSIPHNKRGVLGMVNKGHHSNGSQFYITLQPTPYLDRKYVAFGQLIEGTDVLQQLELVPTENERPIQKCVILNSGDLYA", "length": 307, "header": "tr|A0A8W4FDC7-1|A0A8W4FDC7_PIG Isoform 1 of Probable inactive peptidyl-prolyl cis-trans isomerase-like 6 OS=Sus scrofa OX=9823 GN=PPIL6 PE=3 SV=1 CANONICAL=A0A8W4FDC7-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FDC7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7/entry#A0A8W4FDC7-1", "sequence": { "sequence": "MASQRLSVPCSSQLPPEQPLQVKVVGLFKSSSFQVAKSTAESLKRNYPSKFEDPIIVPVQEFAWDQYLQEKKRELKNEIWEYSSYVMCFINDQLLGDALDLQKWAHKVWDIVDFKPPALYEALTLDYSTKFLRDTKHDFVFLDISIDLYPVGRLIFELYCDTCPKTCKNFQVLCTGKAGFSQSGIRLHYAGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSIPHNKRGVLGMVNKGHHSNGSQFYITLQPTPYLDRKYVAFGQLIEGTDVLQQLELVPTENERPIQKCVILNSGDLYA", "length": 307, "header": "tr|A0A8W4FDC7-1|A0A8W4FDC7_PIG Isoform 1 of Probable inactive peptidyl-prolyl cis-trans isomerase-like 6 OS=Sus scrofa OX=9823 GN=PPIL6 PE=3 SV=1 CANONICAL=A0A8W4FDC7-1" }, "locus": { "chromosome": "1", "start_pos": 75508212, "end_pos": 75465389, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098522.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098522.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077410.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077410.1" } ] } }, { "isoform_ac": "F1RZP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7/entry#F1RZP8-1", "sequence": { "sequence": "MASQRFGPCSSQLPPEQPLQVKVVGLFKSSSFQVAKSTAEELKNEIWEYSSYVMCFINDQLLGDALDLQKWAHKVWDIVDFKPPALYEALTLDYSTKFLRDTKHDFVFLDISIDLYPVGRLIFELYCDTCPKTCKNFQVLCTGKAGFSQSGIRLHYAGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSIPHNKRGVLGMVNKGHHSNGSQFYITLQPTPYLDRKYVAFGQLIEGTDVLQQLELVPTENERPIQKCVILNSGDLYA", "length": 274, "header": "tr|F1RZP8-1|F1RZP8_PIG Computationally mapped isoform of Peptidyl-prolyl cis-trans isomerase OS=Sus scrofa OX=9823 GN=PPIL6 PE=3 SV=2 CANONICAL=A0A8W4FDC7-1" }, "locus": { "chromosome": "1", "start_pos": 75508212, "end_pos": 75465389, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004876.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004876.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004761.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004761.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDC7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157379", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157379", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MQA1-1", "protein_name": "Probable inactive peptidyl-prolyl cis-trans isomerase-like 6", "gene_name": "Ppil6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTASPQQCRPKASACRTLVQPEPLLQVKVVGLFKSSSFQVSKTIAETLKNSYPSRFEDPVIIPLQEFDWDQYLQEKKRELRGETWVYSSYVMCFVNDQLLGNAFDLKKWAQKVWDVVDVRPSALYEALTLDYATKFLKDTKHDFVYLDICIDLSPIGRLIFELYCDTCPKTCKNFQVLCTGTAGFSERGIKLHYKDSIFHRVVQNGWIQGGDIVEGRGDDGESIYGPTFEDENFSVPHNKRGILGMVNKGRHTNASQFYITLQSAPYLDKKYVAFGQLIEGTEVLRQLELVPTENERPMLLCSITDSGILYA", "length": 312 }, "evidence": [ { "id": "A0A8W4FDC7", "url": "https://omabrowser.org/oma/group/A0A8W4FDC7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q1RMP7-1", "protein_name": "Probable inactive peptidyl-prolyl cis-trans isomerase-like 6", "gene_name": "PPIL6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASQQHSVPCISRSPPEQPLQVKVVGLFKSSSFQIAKSAAESLKSNYPSNFEDPIIIPVQEFAWHQYLQEKKRELKNEVWEYSSYVMCFINDKLLGDALDLQKWAHKVWDIVDFKPPALYEALTVDYSAKFLRDTKHNFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENERPIQNCVITASGQLYA", "length": 307 }, "evidence": [ { "id": "A0A8W4FDC7", "url": "https://omabrowser.org/oma/group/A0A8W4FDC7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8IXY8-1", "protein_name": "Probable inactive peptidyl-prolyl cis-trans isomerase-like 6", "gene_name": "PPIL6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARPQPCGPPHARCGSPSLPERPLQVKVVGLFSCPNFQIAKSAAENLKNNHPSKFEDPILVPLQEFAWHQYLQEKKRELKNETWEYSSSVISFVNGQFLGDALDLQKWAHEVWDIVDIKPSALYDALTEDFSAKFLRDTKHDFVFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSGDPYA", "length": 311 }, "evidence": [ { "id": "A0A8W4FDC7", "url": "https://omabrowser.org/oma/group/A0A8W4FDC7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D6D8-1", "protein_name": "Probable inactive peptidyl-prolyl cis-trans isomerase-like 6", "gene_name": "Ppil6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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[], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FDF0-1", "uniprot_ac": "A0A8W4FDF0", "uniprot_id": "A0A8W4FDF0_PIG", "mass": { "chemical_mass": 110678.0, "monoisotopic_mass": 110678.0 }, "refseq": {}, "gene_names": [ { "name": "ERC2", "type": "recommended", "evidence": [ { "id": "A0A8W4FDF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ] } ], "protein_names": [ { "name": "ELKS/RAB6-interacting/CAST family member 2", "type": "synonym", "evidence": [ { "id": "A0A8W4FDF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ERC2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0", "locus": { "chromosome": "13", "start_pos": 37388517, "end_pos": 38367504, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024417", "url": "https://www.ensembl.org/id/ENSSSCG00000024417" } ] } } ], "crossref": [ { "id": "A0A8W4FDF0", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FDF0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024417", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024417", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100627254", "url": "https://www.ncbi.nlm.nih.gov/gene/100627254", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019323", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019323", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EEILEMX", "url": "https://omabrowser.org/oma/group/EEILEMX/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR18861", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18861", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR18861:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18861:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10174", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10174", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BBU9", "url": "https://www.uniprot.org/uniprotkb/A0A287BBU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFU1", "url": "https://www.uniprot.org/uniprotkb/I3LFU1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFU1-1", "url": "https://www.uniprot.org/uniprotkb/I3LFU1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYGSARTITNLEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLTSSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQLTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKAHNIEDDSRMNPEFADRIKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELESLTFRHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDTMADNSQHLQIEELMNALEKTRQELDATKARLASTQQSLAEKEAHLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDEDHHHYHHHHHHHHHRSPGRSQHSNHRPSPDQDDEEGIWA", "length": 957, "header": "tr|A0A8W4FDF0-1|A0A8W4FDF0_PIG Isoform 1 of ELKS/RAB6-interacting/CAST family member 2 OS=Sus scrofa OX=9823 GN=ERC2 PE=4 SV=1 CANONICAL=A0A8W4FDF0-1" }, "isoforms": [ { "isoform_ac": "A0A287BBU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0/entry#A0A287BBU9-1", "sequence": { "sequence": "MYGSARTITNLEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLTSSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQLTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKQAEQLFNQMYNPAHNIEDDSRMNPEFADRIKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELERHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDTMADNSQHLQIEELMNALEKTRQELDATKARLASTQQSLAEKEAHLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDEDHHHYHHHHHHHHHRSPGRSQHSNHRPSPDQDDEEGIWA", "length": 965, "header": "tr|A0A287BBU9-1|A0A287BBU9_PIG Computationally mapped isoform of ELKS/RAB6-interacting/CAST family member 2 OS=Sus scrofa OX=9823 GN=ERC2 PE=4 SV=3 CANONICAL=A0A8W4FDF0-1" }, "locus": { "chromosome": "13", "start_pos": 38327025, "end_pos": 37560919, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040948.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040948.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053547.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053547.3" } ] } }, { "isoform_ac": "A0A8W4FDF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0/entry#A0A8W4FDF0-1", "sequence": { "sequence": "MYGSARTITNLEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLTSSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQLTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKAHNIEDDSRMNPEFADRIKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELESLTFRHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDTMADNSQHLQIEELMNALEKTRQELDATKARLASTQQSLAEKEAHLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDEDHHHYHHHHHHHHHRSPGRSQHSNHRPSPDQDDEEGIWA", "length": 957, "header": "tr|A0A8W4FDF0-1|A0A8W4FDF0_PIG Isoform 1 of ELKS/RAB6-interacting/CAST family member 2 OS=Sus scrofa OX=9823 GN=ERC2 PE=4 SV=1 CANONICAL=A0A8W4FDF0-1" }, "locus": { "chromosome": "13", "start_pos": 38327025, "end_pos": 37560919, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099218.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099218.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076330.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076330.1" } ] } }, { "isoform_ac": "I3LFU1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0/entry#I3LFU1-1", "sequence": { "sequence": "MYGSARTITNLEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLTSSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQLTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKAHNIEDDSRMNPEFADRIKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELERHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDTMADNSQHLQIEELMNALEKTRQELDATKARLASTQQSLAEKEAHLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDEDHHHYHHHHHHHHHRSPGRSQHSNHRPSPDQDDEEGIWA", "length": 953, "header": "tr|I3LFU1-1|A0A8W4FDF0_PIG Computationally mapped isoform of ELKS/RAB6-interacting/CAST family member 2 OS=Sus scrofa OX=9823 GN=ERC2 PE=4 SV=2 CANONICAL=A0A8W4FDF0-1" }, "locus": { "chromosome": "13", "start_pos": 38327025, "end_pos": 37560919, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050909.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050909.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039309.3", "url": "https://www.ensembl.org/id/ENSSSCP00000039309.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFU1", "url": "https://www.uniprot.org/uniprotkb/I3LFU1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AAW1-1", "protein_name": "ELKS/RAB6-interacting/CAST family member 2", "gene_name": "ERC2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MYGSARTISNLEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTFPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLTTSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQMTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKGMEDDNERTRRMAEAESQVNHLEVILDQKEKENIHLREELHRRTQLQPEPAKTKALQTVIEMKKEPPLCIDPAVIFQDTKIASLERNIRDLEDEIQMLKTNGVLNTEDREEEIKQIEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESYKKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKQAEQLFNQMYNPAHEAEEEARMNPEFADRMKQLDKEASYYREECGKAQAEVDRLLEILKEVENEKNDKDKKIAELERHMKDQNKKVANLKHSQQLEKKKNAQLLEEVRRREDNMTDNSQHLQVEELMNALEKTRQELDSTKARLASTQQSLAEKEAHLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDDDHHHYHHHHHHHHHRSPGRPQHSNHRPSPDQMIQSLLEAHSHGKISCCTLITCPTFA", "length": 997 }, "evidence": [ { "id": "A0A8W4FDF0", "url": "https://omabrowser.org/oma/group/A0A8W4FDF0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O15083-1", "protein_name": "ERC protein 2", "gene_name": "ERC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MYGSARTITNLEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLTGSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQLTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKAHNIEDDSRMNPEFADQIKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELESLTLRHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDSMADNSQHLQIEELMNALEKTRQELDATKARLASTQQSLAEKEAHLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDDDHHHYHHHHHHHHHRSPGRSQHSNHRPSPDQDDEEGIWA", "length": 957 }, "evidence": [ { "id": "A0A8W4FDF0", "url": "https://omabrowser.org/oma/group/A0A8W4FDF0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6PH08-1", "protein_name": "ERC protein 2", "gene_name": "Erc2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MYGSARTISNLEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLSGSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQLTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEVQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECNKLEAQLKKAHNIEDDSRMNPEFADRLKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELESLTLRHMKDQNKKVANLKYNQQLEKKKNAQLLEEVRRREDSMVDNSQHLQIEELMNALEKTRQELDATKARLASTQQSLAEKEAHLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDEDHHHYHHHHHHHHHRSPGRSQHSNHRPSPDQDDEEGIWA", "length": 957 }, "evidence": [ { "id": 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"MYGSARTISNPEGSPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKGTMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLGGSSHHHHHQVPSMLRQVRDSTMLDLQAQLKELQRENDLLRKELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQHLQLTIQALQDELRTQRDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTVIEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKNDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECNKLEAQLKKAHNIEDDSRMNPEFADRLKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELESLTLRHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREFSMVDNSQHLQIEELMNALEKTRQELDATKARLASTQQSLAEKEAHLANLRMERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMALKREKDRLVHQLKQQTQNRMKLMADNYDDDHHHYHHHHHHHHHRSPGRSQHSNHRPSPDQDDEEGIWA", "length": 957 }, "evidence": [ { "id": 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synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "pmid": "" }, { "name": "GABA-ergic synapse", "id": "GO:0098982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098982", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of presynaptic active zone", "id": "GO:0098882", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098882", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "maintenance of presynaptic active zone structure", "id": "GO:0048790", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048790", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "pmid": "" }, { "name": "regulation of presynaptic cytosolic calcium ion concentration", "id": "GO:0099509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099509", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "pmid": "" }, { "name": "synaptic vesicle priming", "id": "GO:0016082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016082", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "pmid": "" }, { "name": "regulation of calcium-dependent activation of synaptic vesicle fusion", "id": "GO:0150037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0150037", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], 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"METLNGPAGGGAPDAKPQPPSQHHRHHHLHPLAERRRLHRAPSPARPFLKDLHGRPAAPARSPPLRADLAGKAPPSPGPLAAPGRLSRRSGGAPSAKDKPPPGAGARAAGGAKAAPGPRRAARAVPAEPLPRVGKPPPGAEPPSAAAKSRKAKRGSGAAPARTTGPLVPAVPVPAVILAVTSVAGSPAPGSRISHTDSSSDLSDCPSDPLSDEQRLLPAASSDAESGTGSSDREPLRGAPATSRAARGAPPGSPEPPALLAAPTAASACLAGRSSPSGVLVEDAGGRAPLERMVPGTPKERGQGEQPRLVQAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELETVEEKRAKVEDENETLRQQMIEVEISKQALQNELERLKESSLKRRGSRETYKEKKAFTQDDSADLKCQLQFAKEEGSLMLRKMARLGREKDGLEQELQRYKALYGEVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDLRGQHEREAVGRDPLPGLPTSPFGDSLESCTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFDPRPEPGWLAEGARGLPLQDELQAARLQISELSGKVLTLQHENRVLLSAQRCAPSPRDSDADSDAGKKESDGEDGRPPQPRREGPIGGESDSEETFEKTSGFSSGKPSEASECPAELLRAREDSERLASIRHEAERLERTVERIIADTDGFEDTVLQGSETSPGAGERGAGADKAPQLLGTLNTRMKAFRTELQAFLEQVERLGDGLRERLEGLSPLPHLTESSSFLSTVTSVSRDSPVGNLGKELGPDLQSKLRDQMEWQERGEERGHPHLRAARELHRRADGDAGSCRPGAQSCFNLEMAEEHLCALRWKEREMQERTWADERPLVQQELRALKQHVFLFYVKLRWLLRRWRQGKQLEEEADDSTESELPETFPRLGELGVQGDPKLDGPDQDDDGPGCGFSLGEQIAEHGSWLQPTDGGQPHRQMAENQPLFCALKALLEDLRSELREDVRARRRLQQQYAGDKAAWDVEWAALTCRLEQLEAKTEKSLGDMGSNADSKGAFRKEREAHQKLLADSHGLVMDLRWQIHHNEKNWNREKVELLDRLDRERREWGRQEKELLWRIEQLQKEHSPRRGGSFLRDQNEGDDHSCAHAGMWPCSDADSTAFEDRPLSKLKESDRCSARENLYLDALSLDDEPEEPLLISSPSPLPRAVSVSSMSEFQRLMDGSPFLPEKGLPAASNKEDITPPLSPDDLKYIEEFNTKSWDDGPPDPWADRTEGVREGPEFGAEPFPESSWYLTTSVTLTTDTMTSPEHCQKQPLRSLVCTEQAGVRVLHSPPAVRRLDGIMAAGGEGRVRGSPGDTKGGLSEQVLSRWPCAASRHPRDYTEGGLQPLDSALGNPLGFSSSLHSLEMSKNMSDDMKEVAFSVRNTVCSGPGEPPVKDIACQTNGSRTTGTQTVQTISIGLQTEALRGSAITSSPHKCLTPKAGSGATPASSPSRGLRSRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPKAEQPNRTSPGLGQKGCSESAWARSTTTRESPVHTAINDGLSSLFNIIDHSPVVQDPFQKGLRAASRSRSAEPRPELGPGQETSPSSRGRSPSPIGGGSETCREEGGESTPVRQDLSAPPGYTLTENVARILNRKLLEHALKEERRQAAHGAPSLSGDSHGGEAVRAEPVSIEELPCSALAPSLEPCFSRPERPANRRPPSRWAPHSPTASPVPSPGDPTSLEELGDEEPPGRNSEYPHSRYRLPLC", "length": 1880, "header": "tr|A0A8W4FDI4-1|A0A8W4FDI4_PIG Isoform 1 of Microtubule crosslinking factor 1 OS=Sus scrofa OX=9823 GN=MTCL1 PE=4 SV=1 CANONICAL=A0A8W4FDI4-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FDI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4/entry#A0A8W4FDI4-1", "sequence": { "sequence": "METLNGPAGGGAPDAKPQPPSQHHRHHHLHPLAERRRLHRAPSPARPFLKDLHGRPAAPARSPPLRADLAGKAPPSPGPLAAPGRLSRRSGGAPSAKDKPPPGAGARAAGGAKAAPGPRRAARAVPAEPLPRVGKPPPGAEPPSAAAKSRKAKRGSGAAPARTTGPLVPAVPVPAVILAVTSVAGSPAPGSRISHTDSSSDLSDCPSDPLSDEQRLLPAASSDAESGTGSSDREPLRGAPATSRAARGAPPGSPEPPALLAAPTAASACLAGRSSPSGVLVEDAGGRAPLERMVPGTPKERGQGEQPRLVQAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELETVEEKRAKVEDENETLRQQMIEVEISKQALQNELERLKESSLKRRGSRETYKEKKAFTQDDSADLKCQLQFAKEEGSLMLRKMARLGREKDGLEQELQRYKALYGEVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDLRGQHEREAVGRDPLPGLPTSPFGDSLESCTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFDPRPEPGWLAEGARGLPLQDELQAARLQISELSGKVLTLQHENRVLLSAQRCAPSPRDSDADSDAGKKESDGEDGRPPQPRREGPIGGESDSEETFEKTSGFSSGKPSEASECPAELLRAREDSERLASIRHEAERLERTVERIIADTDGFEDTVLQGSETSPGAGERGAGADKAPQLLGTLNTRMKAFRTELQAFLEQVERLGDGLRERLEGLSPLPHLTESSSFLSTVTSVSRDSPVGNLGKELGPDLQSKLRDQMEWQERGEERGHPHLRAARELHRRADGDAGSCRPGAQSCFNLEMAEEHLCALRWKEREMQERTWADERPLVQQELRALKQHVFLFYVKLRWLLRRWRQGKQLEEEADDSTESELPETFPRLGELGVQGDPKLDGPDQDDDGPGCGFSLGEQIAEHGSWLQPTDGGQPHRQMAENQPLFCALKALLEDLRSELREDVRARRRLQQQYAGDKAAWDVEWAALTCRLEQLEAKTEKSLGDMGSNADSKGAFRKEREAHQKLLADSHGLVMDLRWQIHHNEKNWNREKVELLDRLDRERREWGRQEKELLWRIEQLQKEHSPRRGGSFLRDQNEGDDHSCAHAGMWPCSDADSTAFEDRPLSKLKESDRCSARENLYLDALSLDDEPEEPLLISSPSPLPRAVSVSSMSEFQRLMDGSPFLPEKGLPAASNKEDITPPLSPDDLKYIEEFNTKSWDDGPPDPWADRTEGVREGPEFGAEPFPESSWYLTTSVTLTTDTMTSPEHCQKQPLRSLVCTEQAGVRVLHSPPAVRRLDGIMAAGGEGRVRGSPGDTKGGLSEQVLSRWPCAASRHPRDYTEGGLQPLDSALGNPLGFSSSLHSLEMSKNMSDDMKEVAFSVRNTVCSGPGEPPVKDIACQTNGSRTTGTQTVQTISIGLQTEALRGSAITSSPHKCLTPKAGSGATPASSPSRGLRSRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPKAEQPNRTSPGLGQKGCSESAWARSTTTRESPVHTAINDGLSSLFNIIDHSPVVQDPFQKGLRAASRSRSAEPRPELGPGQETSPSSRGRSPSPIGGGSETCREEGGESTPVRQDLSAPPGYTLTENVARILNRKLLEHALKEERRQAAHGAPSLSGDSHGGEAVRAEPVSIEELPCSALAPSLEPCFSRPERPANRRPPSRWAPHSPTASPVPSPGDPTSLEELGDEEPPGRNSEYPHSRYRLPLC", "length": 1880, "header": "tr|A0A8W4FDI4-1|A0A8W4FDI4_PIG Isoform 1 of Microtubule crosslinking factor 1 OS=Sus scrofa OX=9823 GN=MTCL1 PE=4 SV=1 CANONICAL=A0A8W4FDI4-1" }, "locus": { "chromosome": "6", "start_pos": 99178468, "end_pos": 99062955, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096804.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096804.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076919.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076919.1" } ] } }, { "isoform_ac": "F1SM90-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4/entry#F1SM90-1", "sequence": { "sequence": "MVPGTPKERGQGEQPRLVQAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELETVEEKRAKVEDENETLRQQMIEVEISKQALQNELERLKESSLKRRGSRETYKEKKAFTQDDSADLKCQLQFAKEEGSLMLRKMARLGREKDGLEQELQRYKALYGEVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDLRGQHEREAVGRDPLPGLPTSPFGDSLESCTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFDPRPEPGWLAEGARGLPLQDELQAARLQISELSGKVLTLQHENRVLLSAQRCAPSPRDSDADSDAGKKESDGEDGRPPQPRREGPIGGESDSEETFEKTSGFSSGKPSEASECPAELLRAREDSERLASIRHEAERLERTVERIIADTDGFEDTVLQGSETSPGAGERGAGADKAPQLLGTLNTRMKAFRTELQAFLEQVERLGDGLRERLEGLSPLPHLTESSSFLSTVTSVSRDSPVGNLGKELGPDLQSKLRDQMEWQERGEERGHPHLRAARELHRRADGDAGSCRPGAQSCFNLEVSRGGDSCSSHYLLFQMAEEHLCALRWKEREMQERTWADERPLVQQELRALKQHVFLFYVKLRWLLRRWRQGKQLEEEADDSTESELPETFPRLGELGVQGDPKLDGPDQDDDGPGCGFSLGEQIAEHGSWLQPTDGGQPHRQVGIENQPLFCALKALLEDLRSELREDVRARRRLQQQYAGDKAAWDVEWAALTCRLEQLEAKTEKSLGDMGSNADSKGAFRKEREAHQKLLADSHGLVMDLRWQIHHNEKNWNREKVELLDRLDRERREWGRQEKELLWRIEQLQKEHSPRRGGSFLRDQNEGDDHSCAHAGMWPCSDADSTAFEDRPLSKLKESDRCSARENLYLDALSLDDEPEEPLAHGPQREFRNCFPEEEENHKGNLQRAVSVSSMSEFQRLMDGSPFLPEKGLPAASNKEDITPPLSPDDLKYIEEFNTKSWDDGPPDPWADRTEGVREGPEFGAEPFPESSWYLTTSVTLTTDTMTSPEHCQKQPLRSLVCTEQAGVRVLHSPPAVRRLDGIMAAGGEGRVRGSPGDTKGGLSEQVLSRWPCAASRHPRDYTEGGLQPLDSALGNPLGFSSSLHSLEMSKNMSDDMKEVAFSVRNTVCSGPGEPPVKDIACQTNGSRTTGTQTVQTISIGLQTEALRGSAITSSPHKCLTPKAGSGATPASSPSRGLRSRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPKAEQPNRTSPGLGQKGCSESAWARSTTTRESPVHTAINDGLSSLFNIIDHSPVVQDPFQKGLRAASRSRSAEPRPELGPGQETSPSSRGRSPSPIGGGSETCREEGGESTPVRQDLSAPPGYTLTENVARILNRKLLEHALKEERRQAAHGAPSLSGDSHGGEAVRAEPVSIEELPCSALAPSLEPCFSRPERPANRRPPSRWAPHSPTASPVPSPGDPTSLEELGDEEPPGRSHTCDAGSHG", "length": 1616, "header": "tr|F1SM90-1|F1SM90_PIG Computationally mapped isoform of Microtubule crosslinking factor 1 OS=Sus scrofa OX=9823 GN=MTCL1 PE=4 SV=4 CANONICAL=A0A8W4FDI4-1" }, "locus": { "chromosome": "6", "start_pos": 99177560, "end_pos": 99063313, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004082.4", "url": "https://www.ensembl.org/id/ENSSSCT00000004082.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003990.4", "url": "https://www.ensembl.org/id/ENSSSCP00000003990.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1588, "start_aa": "Thr", "end_pos": 1588, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1588", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "spindle pole", "id": "GO:0000922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000922", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "lateral plasma membrane", "id": "GO:0016328", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016328", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "microtubule bundle", "id": "GO:0097427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097427", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "apicolateral plasma membrane", "id": "GO:0016327", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016327", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of autophagy", "id": "GO:0010506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010506", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "microtubule bundle formation", "id": "GO:0001578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001578", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" }, { "name": "establishment or maintenance of epithelial cell apical/basal polarity", "id": "GO:0045197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045197", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1511, "end_pos": 1513, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1544, "end_pos": 1546, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1639, "end_pos": 1641, "annotation": "n_glycosylation_sequon" }, { "start_pos": 435, "end_pos": 437, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A8W4FDI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" }, { "id": "PF14818", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14818" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SOGA 1/2-like coiled-coil", "eco_id": "ECO_0000259", "start_pos": 1177, "end_pos": 1230, "start_aa": "Met", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A8W4FDI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDI4" }, { "id": "PF11365", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11365" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SOGA coiled-coil", "eco_id": "ECO_0000259", "start_pos": 483, "end_pos": 577, "start_aa": "Asp", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1588 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1511, "end_pos": 1513 }, { "start_pos": 1544, "end_pos": 1546 }, { "start_pos": 1639, "end_pos": 1641 }, { "start_pos": 435, "end_pos": 437 } ] }, "class_list": 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"glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FDK7-1", "uniprot_ac": "A0A8W4FDK7", "uniprot_id": "A0A8W4FDK7_PIG", "mass": { "chemical_mass": 138977.0, "monoisotopic_mass": 138977.0 }, "refseq": {}, "gene_names": [ { "name": "HMGXB3", "type": "recommended", "evidence": [ { "id": "A0A8W4FDK7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7" } ] } ], "protein_names": [ { "name": "HMG-box containing 3", "type": "synonym", "evidence": [ { "id": "A0A8W4FDK7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDK7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HMGXB3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7", "locus": { "chromosome": "2", "start_pos": 151102029, "end_pos": 151036191, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014440", "url": "https://www.ensembl.org/id/ENSSSCG00000014440" } ] } } ], "crossref": [ { "id": "ENSSSCG00000014440", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014440", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21981", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21981", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR009071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036910", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036910", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040648", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040648", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR17609", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17609", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR17609:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17609:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09011", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09011", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18717", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18717", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FDK7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDK7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKE2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKE2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FR42", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FR42", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FR42-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FR42-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RL78", "url": "https://www.uniprot.org/uniprotkb/F1RL78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RL78-1", "url": "https://www.uniprot.org/uniprotkb/F1RL78-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDASYDGTEVTVVMEEIEEADCYTCPGPPKRKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKARLEKEGVDPDAKLSALTAAVPDVPGFRKILPRSDYIIIPKSSLQDEQSCPPVELCVAPPQASPKGPSLVSSAALETVPGHAGVAEQRLAVEAFAEEAGGLGQPAAVEELAASEVLGRDVLLNAAPLEADEGRQPQRPRLVLEEAFARGSPEHPAAGPAGPHAQAGDSVSLVTVMRDPGDSSSSAPAAQFIVLPLPAYSVVENPASIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPTCPACGNFLGGKWTPKEKPSKVKVDLASGVASKGSVVKRSQQPVVTERTSPKQAVPRALESAEAGSQLLSAAPPREGGERGAREAPVPADARLLVTDAPSVSETPVVKSGAQPEVSMGTAERDSPGLDVLPPAEGTSTSTSLPAPKRPPGVDLLTPVPRGPELKGRARGKPSLLAAARPTRAILPAPAHVGRGGGAGLPRARQAFPPSEKAPSVRTCGLKPSTLKQLGQPVQQPSGAGEAQLTNGLASRTPRVEVVEVKPDAFPPYKYSCAVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRSEKTTKVLEASSPLPDVLRATEPLSAAQREVQRQSTLQLLRRVLQIPENEAELAEVFALIHELNSSRLVLSSVSEEAVTIEQTSWSTYYESPSTQCLLCSSPLFKGGPDSLAGPQECWLLTASWLQVVTAQVKMCLNPRCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSISALLQSVQEQTEKTLTSEELRQLQELLCNGYWAFECLTVRDYNDMICGICGVAPTVEVAQRSEENVLALESVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVVAPFFPPLMRGAVVVNTEKDKNLDVPPAPGNGSALVRLLQEGACKLEELSSYSEEELRRLLRQCGIPFAAEDSKDQLCLSLLALYESVQNGARPRQPPPHLTGGKIYKVCPHQVVCGSKCLVRGESALDHVDLLVSSRHWPPVYVVDMATPVALCADLCYPELTSQMWGRNQGCFSNPTEPPVSVSCPELLDQHYSVDVTEAEPSVQHPVTKSATRRIVHAGTQPSAGDPSAGHHSLGLCPELAPYAALVASLADSRPSSARQRPIAFDNATHYYLYNRLLDFLTSREIVNRQIHDVVQGCQPGEVVIRDTLYRLGVAQIKTETDADVDAEDADVAAAAAAE", "length": 1290, "header": "tr|A0A8W4FDK7-1|A0A8W4FDK7_PIG Isoform 1 of HMG-box containing 3 OS=Sus scrofa OX=9823 GN=HMGXB3 PE=4 SV=1 CANONICAL=A0A8W4FDK7-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FDK7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7/entry#A0A8W4FDK7-1", "sequence": { "sequence": "MDASYDGTEVTVVMEEIEEADCYTCPGPPKRKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKARLEKEGVDPDAKLSALTAAVPDVPGFRKILPRSDYIIIPKSSLQDEQSCPPVELCVAPPQASPKGPSLVSSAALETVPGHAGVAEQRLAVEAFAEEAGGLGQPAAVEELAASEVLGRDVLLNAAPLEADEGRQPQRPRLVLEEAFARGSPEHPAAGPAGPHAQAGDSVSLVTVMRDPGDSSSSAPAAQFIVLPLPAYSVVENPASIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPTCPACGNFLGGKWTPKEKPSKVKVDLASGVASKGSVVKRSQQPVVTERTSPKQAVPRALESAEAGSQLLSAAPPREGGERGAREAPVPADARLLVTDAPSVSETPVVKSGAQPEVSMGTAERDSPGLDVLPPAEGTSTSTSLPAPKRPPGVDLLTPVPRGPELKGRARGKPSLLAAARPTRAILPAPAHVGRGGGAGLPRARQAFPPSEKAPSVRTCGLKPSTLKQLGQPVQQPSGAGEAQLTNGLASRTPRVEVVEVKPDAFPPYKYSCAVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRSEKTTKVLEASSPLPDVLRATEPLSAAQREVQRQSTLQLLRRVLQIPENEAELAEVFALIHELNSSRLVLSSVSEEAVTIEQTSWSTYYESPSTQCLLCSSPLFKGGPDSLAGPQECWLLTASWLQVVTAQVKMCLNPRCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSISALLQSVQEQTEKTLTSEELRQLQELLCNGYWAFECLTVRDYNDMICGICGVAPTVEVAQRSEENVLALESVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVVAPFFPPLMRGAVVVNTEKDKNLDVPPAPGNGSALVRLLQEGACKLEELSSYSEEELRRLLRQCGIPFAAEDSKDQLCLSLLALYESVQNGARPRQPPPHLTGGKIYKVCPHQVVCGSKCLVRGESALDHVDLLVSSRHWPPVYVVDMATPVALCADLCYPELTSQMWGRNQGCFSNPTEPPVSVSCPELLDQHYSVDVTEAEPSVQHPVTKSATRRIVHAGTQPSAGDPSAGHHSLGLCPELAPYAALVASLADSRPSSARQRPIAFDNATHYYLYNRLLDFLTSREIVNRQIHDVVQGCQPGEVVIRDTLYRLGVAQIKTETDADVDAEDADVAAAAAAE", "length": 1290, "header": "tr|A0A8W4FDK7-1|A0A8W4FDK7_PIG Isoform 1 of HMG-box containing 3 OS=Sus scrofa OX=9823 GN=HMGXB3 PE=4 SV=1 CANONICAL=A0A8W4FDK7-1" }, "locus": { "chromosome": "2", "start_pos": 151101409, "end_pos": 151040094, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099031.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099031.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077398.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077398.1" } ] } }, { "isoform_ac": "A0A8W4FKE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7/entry#A0A8W4FKE2-1", "sequence": { "sequence": "MDASYDGTEVTVVMEEIEEADCYTCPGPPKRKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKARLEKEGVDPDAKLSALTAAVPDVPGFRKILPRSDYIIIPKSSLQDEQSCPPVELCVAPPQASPKGPSLVSSAALETVPGHAGVAEQRLAVEAFAEEAGGLGQPAAVEELAASEVLGRDVLLNAAPLEADEGRQPQRPRLVLEEAFARGSPEHPAAGPAGPHAQAGDSVSLVTVMRDPGDSSSSAPAAQFIVLPLPAYSVVENPASIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPTCPACGNFLGGKWTPKEKPSKVKVDLASGVASKGSVVKRSQQPVVTERTSPKQRCPPAALESAEAGSQLLSAAPPREGGERGAREAPVPADARLLVTDAPSVSETPVVKSGAQPEVSMGTAERDSPGLDVLPPAEGTSTSTSLPAPKRPPGVDLLTPVPRGPELKGRARGKPSLLAAARPTRAILPAPAHVGRGGGAGLPRARQAFPPSEKAPSVRTCGLKPSTLKQLGQPVQQPSGAGEAQLTNGLASRTPRVEVVEVKPDAFPPYKYSCAVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRSEKTTKVLEASSPLPDVLRATEPLSAAQREVQRQSTLQLLRRVLQIPENEAELAEVFALIHELNSSRLVLSSVSEEAVTIEQTSWSTYYESPSTQCLLCSSPLFKGGPDSLAGPQECWLLTASWLQVVTAQVKMCLNPRCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSISALLQSVQEQTEKTLTSEELRQLQELLCNGYWAFECLTVRDYNDMICGICGVAPTVEVAQRSEENVLALESVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVVAPFFPPLMRGAVVVNTEKDKNLDVPPAPGNGSARGPVCRPLLPRADQPDVGEEPGLLLQPHGAACERVLPRALGPALLGGRDRGRALGPAPGHQERHAAHRPRGHAAQRRRPQRRAPLPGPVSGAGALRGARGLPRGQQAQQRPPAAHRLRQRHPLLPLQPPAGLPHQPRDRQPADPRRGAGLPAGRGGHPRHPLPPGGGADQDRDGRGRGRGGRGRGRSRSRRVSQAPAQGPHHLSSHSRAPAEADPSQGPACTPGTDQRAAVR", "length": 1215, "header": "tr|A0A8W4FKE2-1|A0A8W4FKE2_PIG Computationally mapped isoform of HMG-box containing 3 OS=Sus scrofa OX=9823 GN=HMGXB3 PE=4 SV=1 CANONICAL=A0A8W4FDK7-1" }, "locus": { "chromosome": "2", "start_pos": 151101531, "end_pos": 151040094, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102004.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102004.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079936.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079936.1" } ] } }, { "isoform_ac": "A0A8W4FR42-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7/entry#A0A8W4FR42-1", "sequence": { "sequence": "MDASYDGTEVTVVMEEIEEADCYTCPGPPKRKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKARLEKEGVDPDAKLSALTAAVPDVPGFRKILPRSDYIIIPKSSLQDEQSCPPVELCVAPPQASPKGPSLVSSAALETVPGHAGVAEQRLAVEAFAEEAGGLGQPAAVEELAASEVLGRDVLLNAAPLEADEGRQPQRPRLVLEEAFARGSPEHPAAGPAGPHAQAGDSVSLVTVMRDPGDSSSSAPAAQFIVLPLPAYSVVENPASIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPTCPACGNFLGGKWTPKEKPSKVKVDLASGVASKGSVVKRSQQPVVTERTSPKQAVPRALESAEADAPSVSETPVVKSGAQPEVSMGTAERDSPGLDVLPPAEGTSTSTSLPAPKRPPGVDLLTPVPRGPELKGRARGKPSLLAAARPTRAILPAPAHVGRGGGAGLPRARQAFPPSEKAPSVRTCGLKPSTLKQLGQPVQQPSGAGEAQLTNGLASRTPRVEVVEVKPDAFPPYKYSCAVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRSEKTTKVLEASSPLPDVLRATEPLSAAQREVQRQSTLQLLRRVLQIPENEAELAEVFALIHELNSSRLVLSSVSEEAVTIEQTSWSTYYESPSTQCLLCSSPLFKGGPDSLAGPQECWLLTASWLQVVTAQVKMCLNPRCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSISALLQSVQEQTEKTLTSEELRQLQELLCNGYWAFECLTVRDYNDMICGICGVAPTVEVAQRSEENVLALESVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVVAPFFPPLMRGAVVVNTEKDKNLDVPPAPGNGSALVRLLQEGACKLEELSSYSEEELRRLLRQCGIPFAAEDSKDQLCLSLLALYESVQNGARPRQPPPHLTGGKIYKVCPHQVVCGSKCLVRGESALDHVDLLVSSRHWPPVYVVDMATPVALCADLCYPELTSQMWGRNQGCFSNPTEPPVSVSCPELLDQHYSVDVTEAEPSVQHPVTKSATRRIVHAGTQPSAGDPSAGHHSLGLCPELAPYAALVASLADSRPSSARQRPIAFDNATHYYLYNRLLDFLTSREIVNRQIHDVVQGCQPGEVVIRDTLYRLGVAQIKTETDADVDAEDADVAAAAAAE", "length": 1258, "header": "tr|A0A8W4FR42-1|A0A8W4FR42_PIG Computationally mapped isoform of HMG-box containing 3 OS=Sus scrofa OX=9823 GN=HMGXB3 PE=4 SV=1 CANONICAL=A0A8W4FDK7-1" }, "locus": { "chromosome": "2", "start_pos": 151101409, "end_pos": 151040094, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105456.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105456.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080981.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080981.1" } ] } }, { "isoform_ac": "F1RL78-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDK7/entry#F1RL78-1", "sequence": { "sequence": "MDASYDGTEVTVVMEEIEEADCYTCPGPPKRKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKARLEKEGVDPDAKLSALTAAVPDVPGFRKILPRSDYIIIPKSSLQDEQSCPPVELCVAPPQASPKGPSLVSSAALETVPGHAGVAEQRLAVEAFAEEAGGLGQPAAVEELAASEVLGRDVLLNAAPLEADEGRQPQRPRLVLEEAFARGSPEHPAAGPAGPHAQAGDSVSLVTVMRDPGDSSSSAPAAQFIVLPLPAYSVVENPASIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPTCPACGNFLGGKWTPKEKPSKVKVDLASGVASKGSVVKRSQQPVVTERTSPKQRCPPAALESAEAGSQLLSAAPPREGGERGAREAPVPADARLLVTDAPSVSETPVVKSGAQPEVSMGTAERDSPGLDVLPPAEGTSTSTSLPAPKRPPGVDLLTPVPRGPELKGRARGKPSLLAAARPTRAILPAPAHVGRGGGAGLPRARQAFPPSEKAPSVRTCGLKPSTLKQLGQPVQQPSGAGEAQLTNGLASRTPRVEVVEVKPDAFPPYKYSCAVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRSEKTTKVLEASSPLPDVLRATEPLSAAQREVQRQSTLQLLRRVLQIPENEAELAEVFALIHELNSSRLVLSSVSEEAVTIEQTSWSTYYESPSTQCLLCSSPLFKGGPDSLAGPQECWLLTASWLQVVTAQVKMCLNPRCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSISALLQSVQEQTEKTLTSEELRQLQELLCNGYWAFECLTVRDYNDMICGICGVAPTVEVAQRSEENVLALESVEFTWPEFLASSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVVAPFFPPLMRGAVVVNTEKDKNLDVPPAPGNGSALVRLLQEGACKLEELSSYSEEELRRLLRQCGIPFAAEDSKDQLCLSLLALYESVQNGARPRQPPPHLTGGKIYKVCPHQVVCGSKCLVRGESALDHVDLLVSSRHWPPVYVVDMATPVALCADLCYPELTSQMWGRNQGCFSNPTEPPVSGDAHALRGSAPVPCRPPRSLCLSHARSHGGLSSPSRACPAQSSWTSITRWT", 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FE41-1", "uniprot_ac": "A0A8W4FE41", "uniprot_id": "A0A8W4FE41_PIG", "mass": { "chemical_mass": 265828.0, "monoisotopic_mass": 265828.0 }, "refseq": {}, "gene_names": [ { "name": "GOLGA4", "type": "recommended", "evidence": [ { "id": "A0A8W4FE41", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41" } ] } ], "protein_names": [ { "name": "Golgin A4", "type": "synonym", "evidence": [ { "id": "A0A8W4FE41", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE41", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GOLGA4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41", "locus": { "chromosome": "13", "start_pos": 22250463, "end_pos": 22125121, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011243", "url": "https://www.ensembl.org/id/ENSSSCG00000011243" } ] } } ], "crossref": [ { "id": "A0A8W4FE41", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FE41", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR000237", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000237", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR19327", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19327", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19327:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19327:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01465", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01465", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FE41", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FE41-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPC8", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPC8-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPC8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPD0", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPD0-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPD0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQG3", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQG3-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQG3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQN3", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQN3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQN3-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQN3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5URP1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5URP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5URP1-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5URP1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5URP6", "url": "https://www.uniprot.org/uniprotkb/A0ABB5URP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5URP6-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5URP6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRELLAGMIAEPAFLSEYTIFALDSSKQPKTQTDSVNASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKELHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKKSSEQITKLQKRHEEDLASKDQELAEKFQAQEKFQEQMRVALEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2282, "header": "tr|A0A8W4FE41-1|A0A8W4FE41_PIG Isoform 1 of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=2 CANONICAL=A0A8W4FE41-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FE41-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#A0A8W4FE41-1", "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRELLAGMIAEPAFLSEYTIFALDSSKQPKTQTDSVNASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKELHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKKSSEQITKLQKRHEEDLASKDQELAEKFQAQEKFQEQMRVALEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2282, "header": "tr|A0A8W4FE41-1|A0A8W4FE41_PIG Isoform 1 of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=2 CANONICAL=A0A8W4FE41-1" }, "locus": { "chromosome": "13", "start_pos": 22247060, "end_pos": 22125447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094770.2", "url": "https://www.ensembl.org/id/ENSSSCT00000094770.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077527.2", "url": "https://www.ensembl.org/id/ENSSSCP00000077527.2" } ] } }, { "isoform_ac": "A0ABB5UPC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#A0ABB5UPC8-1", "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRELLAGMIAEPAFLSEYTIFALDSSKQPKTQTDSVNASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKELHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2240, "header": "tr|A0ABB5UPC8-1|A0ABB5UPC8_PIG Computationally mapped isoform of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=1 CANONICAL=A0A8W4FE41-1" }, "locus": { "chromosome": "13", "start_pos": 22247060, "end_pos": 22125447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107663.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107663.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082057.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082057.1" } ] } }, { "isoform_ac": "A0ABB5UPD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#A0ABB5UPD0-1", "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRELLAGMIAEPAFLSEYTIFALDSSKQPKTQTDSVNASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2212, "header": "tr|A0ABB5UPD0-1|A0ABB5UPD0_PIG Computationally mapped isoform of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=1 CANONICAL=A0A8W4FE41-1" }, "locus": { "chromosome": "13", "start_pos": 22247060, "end_pos": 22125447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107662.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107662.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082056.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082056.1" } ] } }, { "isoform_ac": "A0ABB5UQG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#A0ABB5UQG3-1", "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRENASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKELHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2207, "header": "tr|A0ABB5UQG3-1|A0ABB5UQG3_PIG Computationally mapped isoform of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=1 CANONICAL=A0A8W4FE41-1" }, "locus": { "chromosome": "13", "start_pos": 22247060, "end_pos": 22125447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107664.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107664.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082058.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082058.1" } ] } }, { "isoform_ac": "A0ABB5UQN3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#A0ABB5UQN3-1", "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRENASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2179, "header": "tr|A0ABB5UQN3-1|A0ABB5UQN3_PIG Computationally mapped isoform of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=1 CANONICAL=A0A8W4FE41-1" }, "locus": { "chromosome": "13", "start_pos": 22247060, "end_pos": 22125447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107665.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107665.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082059.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082059.1" } ] } }, { "isoform_ac": "A0ABB5URP1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#A0ABB5URP1-1", "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRELLAGMIAEPAFLSEYTIFALDSSKQPKTQTDSVNASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKKSSEQITKLQKRHEEDLASKDQELAEKFQAQEKFQEQMRVALEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2254, "header": "tr|A0ABB5URP1-1|A0ABB5URP1_PIG Computationally mapped isoform of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=1 CANONICAL=A0A8W4FE41-1" }, "locus": { "chromosome": "13", "start_pos": 22247060, "end_pos": 22125447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107661.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107661.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082055.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082055.1" } ] } }, { "isoform_ac": "A0ABB5URP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41/entry#A0ABB5URP6-1", "sequence": { "sequence": "MFKKLKQKISEEQQQFQQALASTQASSNSSTPTRARSRTSSFTEQLDEGTPNRENASIQATKSPDSVNGSEPTTPQSGDTQSFAQKLQLRVPSVESLFRSPIKESLFRSSSKESLVRTSSRESLNRLDLDSSAATFDPPSDMESETEDSLGNLDSLSKEQLIQWLRRMERRLNGYKGKCSELVTAYQTLQREKKKLQGILSQSQDKALRRIGELREELQMDQQAKKHLQEEFDASLEEKDQYISVLQTQVSLLKQRLRNGPMNADLSKPLPQMEPQPEGVSKESTESDAEPVGDGTSAKTLEILQQRVKRQENLLQRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKMKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEEERIRLQQELSLVKQEVVDVMKKSSEQITKLQKRHEEDLASKDQELAEKFQAQEKFQEQMRVALEKSQSEYLKITQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMREGQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRRELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLREEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAKLEKLEVDLNHSLKENTFLQEHVVELKTLAEKEKLKISELTEKLKTTDEEFQSLKALHDRSKKSLEDRSLEFKKLSEELAVQLDIYSKKTEALLQAKTKELISISSSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQLEEKESQIKSMKADIEGLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKAEISNLSKQLTDLNAQLQNSVSLPEKEAAISSLSKQYDEARRELLDQVQDLSLKVETLSKEKTSALEQVDHLSSKFSEWKKKAQSRFTQYQNTNKELQMQLDLKAKETSEKDEQITLLREDLDQQNKKFEYLKGEMEDKKNEMAKKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNCNQQKDTEQKEMMQKLEHIQELVEEKDNKVKEDEEKVLILENQASAMKSELESVKKELEQVNSSVKSKAEELKALEDRLESESAAKLAELKKKAEQKIAAIKKQLLSQMEEKEQQYRKDRESQLSELNTKLQEREREIHILEEKLKSAGSSPQSETSLVPRSAENVAACTEKAETDSQVCMQKMCEEKISVLQRNLIEKEKLLQKLEQEKEETVSSHSEMQCKYQELLKKIEHSEAKQHEDQVMINCLQEELEEKNKKYSLLVSQHVVEEGGKNNRGAKQNLEYGVDDVQRTFPEKDLTCQILEQKIKELDSCLLREREEHRVEIEELTSQFEKLQALQQQMDGKNKPTEVLEESSEEKAKSHVVQSGVLGNVKTEHNDLEFKLAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYEQEMEEKIKQEQEDLELKHNSTLKQLMREFHTQLAQKEQELEMTIKETIDKAQEVEAELLESHQEETNQLYKRIAEKEDDLKRTAKRYEEILDAREEEMTAKVLDLQAQLEELQKKYQQQLEQEENPGSDKVTIMELQTQLAQKTTLISDSKLKEQEFREQIHNLEDRLKKYEKNLYATAVGTPYKGGNLYHTDVSLFGEPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMYTSPRSGIF", "length": 2221, "header": "tr|A0ABB5URP6-1|A0ABB5URP6_PIG Computationally mapped isoform of Golgin A4 OS=Sus scrofa OX=9823 GN=GOLGA4 PE=4 SV=1 CANONICAL=A0A8W4FE41-1" }, "locus": { "chromosome": "13", "start_pos": 22247060, "end_pos": 22125447, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107666.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107666.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082060.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082060.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE41", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE41", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase binding", "id": "GO:0051020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051020", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE41", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "Golgi to plasma membrane protein transport", "id": "GO:0043001", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043001", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE41", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41" } ], "pmid": "" }, { "name": "positive regulation of axon extension", "id": "GO:0045773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045773", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE41", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE41" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1178, "end_pos": 1180, "annotation": "n_glycosylation_sequon" }, { "start_pos": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FE49-1", "uniprot_ac": "A0A8W4FE49", "uniprot_id": "A0A8W4FE49_PIG", "mass": { "chemical_mass": 64218.0, "monoisotopic_mass": 64218.0 }, "refseq": {}, "gene_names": [ { "name": "FERRY3", "type": "recommended", "evidence": [ { "id": "A0A8W4FE49", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE49" } ] } ], "protein_names": [ { "name": "FERRY endosomal RAB5 effector complex subunit 3", "type": "synonym", "evidence": [ { "id": "A0A8W4FE49", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE49/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FE49", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE49" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FERRY3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE49", "locus": { "chromosome": "5", "start_pos": 65944179, "end_pos": 65897537, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000723", "url": "https://www.ensembl.org/id/ENSSSCG00000000723" } ] } } ], "crossref": [ { "id": "A0A8W4FE49", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FE49", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000723", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000723", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153309", "url": "https://www.ncbi.nlm.nih.gov/gene/100153309", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019311", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019311", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "F1SKZ3", "url": "https://www.orthodb.org/?gene=F1SKZ3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16525", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16525", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16525:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16525:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10154", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10154", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FE49", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FE49-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FE49-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKZ3", "url": "https://www.uniprot.org/uniprotkb/F1SKZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { 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It likely functions as a substrate-adapter that recruits key substrates, e.g. MSI2, to CUL3-based ubiquitin ligase complexes for degradation. 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and Pathway" ] }, { "id": "A0A8W4FEE5", "url": "https://www.orthodb.org/?gene=A0A8W4FEE5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24072", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24072", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00071", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00071", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9013418", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013418", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003483436", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483436", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FEE5", "url": 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"MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDLSEGELGGPSGSGGPHPEDHRGHPDHHHHHHHHHGRDFLLRAASFDVCESVEEGGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDNSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAASSSSPSSSSAVV", "length": 726, "header": "tr|A0A8W4FEE5-1|A0A8W4FEE5_PIG Isoform 1 of Rho-related BTB domain-containing protein 2 OS=Sus scrofa OX=9823 GN=RHOBTB2 PE=3 SV=1 CANONICAL=A0A8W4FEE5-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FEE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5/entry#A0A8W4FEE5-1", "sequence": { "sequence": "MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDLSEGELGGPSGSGGPHPEDHRGHPDHHHHHHHHHGRDFLLRAASFDVCESVEEGGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDNSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAASSSSPSSSSAVV", "length": 726, "header": "tr|A0A8W4FEE5-1|A0A8W4FEE5_PIG Isoform 1 of Rho-related BTB domain-containing protein 2 OS=Sus scrofa OX=9823 GN=RHOBTB2 PE=3 SV=1 CANONICAL=A0A8W4FEE5-1" }, "locus": { "chromosome": "14", "start_pos": 7253870, "end_pos": 7239252, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010566.5", "url": "https://www.ensembl.org/id/ENSSSCT00000010566.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077627.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077627.1" } ] } }, { "isoform_ac": "A0A8W4FHZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5/entry#A0A8W4FHZ0-1", "sequence": { "sequence": "GKRSQLMDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDLSEGELGGPSGSGGPHPEDHRGHPDHHHHHHHHHGRDFLLRAASFDVCESVEEGGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDNSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAASSSSPSSSSAVV", "length": 732, "header": "tr|A0A8W4FHZ0-1|A0A8W4FHZ0_PIG Computationally mapped isoform of Rho-related BTB domain-containing protein 2 OS=Sus scrofa OX=9823 GN=RHOBTB2 PE=3 SV=1 CANONICAL=A0A8W4FEE5-1" }, "locus": { "chromosome": "14", "start_pos": 7253870, "end_pos": 7231206, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023968.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023968.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078940.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078940.1" } ] } }, { "isoform_ac": "A0A8W4FNH4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5/entry#A0A8W4FNH4-1", "sequence": { "sequence": "MLTCPKDGMRDSYTGSLSLSSAQRLGGAGTDQDSCLPVPPLDTVTMPLTWLPIGWSWIPALKILVVVSSHIPSCWAGPGHCFWTGSGDGPARPQRRSSRQPGEHGHTWDWSSFPAQPGAWKEHRAMAARRKGQYSLWKSSLDSMSQLMDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDLSEGELGGPSGSGGPHPEDHRGHPDHHHHHHHHHGRDFLLRAASFDVCESVEEGGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDNSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAASSSSPSSSSAVV", "length": 873, "header": "tr|A0A8W4FNH4-1|A0A8W4FNH4_PIG Computationally mapped isoform of Rho-related BTB domain-containing protein 2 OS=Sus scrofa OX=9823 GN=RHOBTB2 PE=3 SV=1 CANONICAL=A0A8W4FEE5-1" }, "locus": { "chromosome": "14", "start_pos": 7253870, "end_pos": 7223044, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010559.5", "url": "https://www.ensembl.org/id/ENSSSCT00000010559.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080904.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080904.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152436", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152436", "resource": "KEGG Pathway" }, { "id": "R-SSC-9013418", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013418", "resource": "Reactome", "description": "RHOBTB2 GTPase cycle" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "cell projection", "id": "GO:0042995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042995", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 9, "go_terms": [ { "name": "small GTPase-mediated signal transduction", "id": "GO:0007264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007264", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "regulation of actin cytoskeleton organization", "id": "GO:0032956", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032956", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "establishment or maintenance of cell polarity", "id": "GO:0007163", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007163", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" }, { "name": "cortical cytoskeleton organization", "id": "GO:0030865", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030865", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEE5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 373, "end_pos": 375, "annotation": "n_glycosylation_sequon" }, { "start_pos": 37, "end_pos": 39, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A8W4FEE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEE5" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 266, "end_pos": 441, "start_aa": "Ala", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 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"sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEL1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1", "locus": {} } ], "crossref": [ { "id": "IPR031624", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031624", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053366", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053366", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR35542", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35542", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35542:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35542:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15804", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15804", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FEL1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEL1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 2306, "header": "tr|A0A8W4FEL1-1|A0A8W4FEL1_PIG Isoform 1 of Coiled-coil domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FEL1-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FEL1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1/entry#A0A8W4FEL1-1", "sequence": { "sequence": "MIRMTKVPLAQEQSKQSSPAVKTEDAKTPDGELATEVKQSKEHILQRGETDRERNVDTCSRPDPHYLDLKAKESPLLLTQNLRDLQQKTKEQEGKVQEGKWQPKDVTLAETCTSASFPPRPNEKPSVREEGTQTSSPVNAQKSLGSEEELHADPTASSPQKETRLPPNEEEGGTERRNFKSSKRAENEKQESKDEPGRVLTRWAPSSPSPLPFQSDKEVQVGGDVLATHERSVQPRRSNAGEIIARTESVSGNITRAVQTQTTSSSLSPLTLRLEKEVQVGGDMPAVHKRSVLPRRSNAGEVAYTESVSGSLRRDVQTQTTSSSLSPLPFQSDKEVQVGDDMLGVHKRSVQPRRSNAGETIARTESVSGNITRAVQTQTTSSSLSPLPLRLDKEVQVGGDMPAVHKRSVLPRRSNAGEVAYTESVSGNLRRDVQTQTTSSSLSPLPFQSDKEVQVGDDMLGVHKRSVLPRRSNAGEIIARTESVSGNITRAVQTQTTSSSLSTFTFKSDKEVQVGDDMPAMHERSVLPRLSTAVVHTESVSSDVVRHVQTKEQRTPGKAERDRASAADPRCATQTKDRTLGSRKPAPSHTLHRTELYLHVAGGGPKAPEGPGEPPCLAVRKIHVSQPPAKPKLDKGTQVDEGRLGIKRPSLLPQMLSALSERKERAGTKGIGGNVIERKQHVSEKEKKDAVTKVDLRLKTYRREALASPISNILRTREFVLNVIKEPEEKRHKGPAGPGVVLTRTFLSIPSPPLYLDSGSKTDKEASGIRRSSCAQRNLQASADTRKTATRETAAGEGETVHTKPSVPEEVRQWTSNFMVSVQRRKDPPRVRSEEDLSRFLFNSQQEDFYFTGFGAIRSEKRLECFLTGPEDPQEKYRAEALTTFLSFPIMDLTTIENLKKETEIMTNLTQKISPPVLVSLPRKTPKDIHAPLGPPVSAEGCPAAEQGAHQCDTLSRASPGSAGAYKFDRPEGDRQNNEKISTMSPPNVLDPQTKESLEEMNITRSNASPNTEQEIFLKKQVVLRSGSGQKTRLDSSLSLKIPLPNGKQRTPLEIDMHKQTTVYPGLQTLRGTDIGVTEFNALNGKKEQAPIVPEQEARNLDLLQKSFSSCFTFPLQSGDLEKKTKTDTSPPIHFEQNKLEMKEGILKIDTNIAVRLEEDKIEMRKRTIVNLEKDKIKMDTSNTINLRTVSPKAEEPAVKTRVFTRVPNSCPIKQKHKKEREVSGAKQNIQLQKMFQKHTLGSFYAYIPLPSKFGDQKGRLTVADLKRELSSKHVNMNIPKHPILHILGNTGHSTPSNRKKLEYNFNKPKTASWSEGASEIFIRSLSISMSPSHPKGTVKSETIQEQAKRTCLSKFQEKSPNTRETVERDNSSAVRKRDQNFISTVPRDSQPFVTDGQQTHKCPSVKSEANLSSESNRNLTPQTKGRVASEHAISRAVKEPGLLMIEQEKAPKPIQTPTECASMSEDSKKKVDTHTENTLSMNISPPGVEAPQCETQLSDTVDCDLSPEHRDHGGPLQDTTTREVQQQQTSPGTVSVPTQLKSNEIKIVIDSPSAESLRPLYEAVQNVFESQVKNMLQDKTFADPLEEGEDNKPGDGKSPAFAGGPAATSMTVHLKLRPKPILENLTCKGKNKLTSHLASKAPEIKQNLIPEMVKRSFQEFNCYPHQAISKYNSWRLNPKHKNMCFLSLEGTDNIDFNLKHKYTQDSPPASHMKSLTVNVSSGREDIITKSKTLNELERKTSPLTSAREMPLPHILQNYSVEGKNKLLIHFSMKTLEIQMKAFPQMMRESYTMANAQDGQKPLSKCIHSDVKIPRQKNRIVLLFEEKSLHQLDLNLRYKYLRFLLGLPAQSMFPKPEALPKHILKLQTVALCKKVDDGGESGGLSIDAEPLEQHISFKKQSLRENSSLIRKCLGPTQEGTSDSDQHSTAQKRDTTALPKLTSHVAPEKEKQCHVWFQDTNACESVDLKTKEKDHDLADARSVQSLEDFTDSQTNNVSSDNFEGCSALRARESEECLFLDANSYLSQESQNILFELQEGLPLEFLYKKKKVNTGLQPFHRDDSGSHHVKGCQKLSSVVTPPSYESHKSRKHRSSSKMRHRPPDSRCDSSLNTIDNPSGSSSSPFSEENLSPSTRSRKSYSVVPLTEANIKLHLAKSQGRPHRHLDSKEGRKAKLDSLRKDKSPWEYDRSYTQSTEKRTRKKKGRDYESERSAYVPSKRKSASKPLQEDMDFYSETKQNQPFFYACVPADSLGITPQTIRWTVPPKTLRKRNFRVPLVAKISSSCSIWSSSKKLLGSLLESFSLVHPQ", "length": 2306, "header": "tr|A0A8W4FEL1-1|A0A8W4FEL1_PIG Isoform 1 of Coiled-coil domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FEL1-1" }, "locus": { "chromosome": "11", "start_pos": 71054616, "end_pos": 71047699, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106801.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106801.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077751.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077751.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEL1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1002, "end_pos": 1004, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1007, "end_pos": 1009, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1371, "end_pos": 1373, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1411, "end_pos": 1413, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1419, "end_pos": 1421, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1483, "end_pos": 1485, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1625, "end_pos": 1627, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1719, "end_pos": 1721, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1758, "end_pos": 1760, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1905, "end_pos": 1907, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1995, "end_pos": 1997, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2127, "end_pos": 2129, "annotation": "n_glycosylation_sequon" }, { "start_pos": 253, "end_pos": 255, "annotation": "n_glycosylation_sequon" }, { "start_pos": 370, "end_pos": 372, "annotation": "n_glycosylation_sequon" }, { "start_pos": 487, "end_pos": 489, "annotation": "n_glycosylation_sequon" }, { "start_pos": 908, "end_pos": 910, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A8W4FEL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEL1" }, { "id": "PF15804", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15804" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Coiled-coil", "eco_id": "ECO_0000259", "start_pos": 61, "end_pos": 171, "start_aa": "Arg", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1002, "end_pos": 1004 }, { "start_pos": 1007, "end_pos": 1009 }, { "start_pos": 1371, "end_pos": 1373 }, { "start_pos": 1411, "end_pos": 1413 }, { "start_pos": 1419, "end_pos": 1421 }, { "start_pos": 1483, "end_pos": 1485 }, { "start_pos": 1625, "end_pos": 1627 }, { "start_pos": 1719, "end_pos": 1721 }, { "start_pos": 1758, "end_pos": 1760 }, { "start_pos": 1905, "end_pos": 1907 }, { "start_pos": 1995, "end_pos": 1997 }, { "start_pos": 2127, "end_pos": 2129 }, { "start_pos": 253, "end_pos": 255 }, { "start_pos": 370, "end_pos": 372 }, { "start_pos": 487, "end_pos": 489 }, { "start_pos": 908, "end_pos": 910 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "plasma membrane repair", "id": "GO:0001778", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001778", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" }, { "name": "binding of sperm to zona pellucida", "id": "GO:0007339", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007339", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" }, { "name": "myoblast fusion", "id": "GO:0007520", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007520", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" }, { "name": "membrane fusion", "id": "GO:0061025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061025", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" }, { "name": "T-tubule organization", "id": "GO:0033292", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033292", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" }, { "name": "membrane fusion involved in acrosome reaction", "id": "GO:0002078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002078", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" }, { "name": "cytoplasmic vesicle membrane", "id": "GO:0030659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030659", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN5" } ], "pmid": "" } ] } ] }, 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FEQ2-1", "uniprot_ac": "A0A8W4FEQ2", "uniprot_id": "A0A8W4FEQ2_PIG", "mass": { "chemical_mass": 58139.0, "monoisotopic_mass": 58139.0 }, "refseq": { "ac": "XP_005660965", "name": "kelch repeat and BTB domain-containing protein 4 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660965" }, "gene_names": [ { "name": "KBTBD4", "type": "recommended", "evidence": [ { "id": "A0A8W4FEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2" } ] }, { "name": "KBTBD4", "type": "synonym", "evidence": [ { "id": "XP_005660965", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660965" } ] } ], "protein_names": [ { "name": "Kelch repeat and BTB domain containing 4", "type": "synonym", "evidence": [ { "id": "A0A8W4FEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2/entry#names_and_taxonomy" } ] }, { "name": "kelch repeat and BTB domain-containing protein 4 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005660965", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660965" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEQ2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KBTBD4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2", "locus": { "chromosome": "2", "start_pos": 15043824, "end_pos": 15036903, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013227", "url": "https://www.ensembl.org/id/ENSSSCG00000013227" } ] } } ], "crossref": [ { "id": "A0A8W4FEQ2", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FEQ2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013227", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013227", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18272", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18272", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18481", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18481", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511244", "url": "https://www.ncbi.nlm.nih.gov/gene/100511244", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011498", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011498", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042884", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042884", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042949", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042949", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042950", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042950", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511244", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511244", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CYVKPYV", "url": "https://omabrowser.org/oma/group/CYVKPYV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SIF4", "url": "https://www.orthodb.org/?gene=F1SIF4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47195", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47195", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47195:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47195:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005660965", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660965", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AVK5", "url": "https://www.uniprot.org/uniprotkb/A0A287AVK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVK5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEQ2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIF4", "url": "https://www.uniprot.org/uniprotkb/F1SIF4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIF4-1", "url": "https://www.uniprot.org/uniprotkb/F1SIF4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKAHLAQLQNTEEFLHLPHHLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFSESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSVPSLWKIASCNGSIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA", "length": 518, "header": "tr|A0A8W4FEQ2-1|A0A8W4FEQ2_PIG Isoform 1 of Kelch repeat and BTB domain containing 4 OS=Sus scrofa OX=9823 GN=KBTBD4 PE=4 SV=1 CANONICAL=A0A8W4FEQ2-1" }, "isoforms": [ { "isoform_ac": "A0A287AVK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2/entry#A0A287AVK5-1", "sequence": { "sequence": "MGLLGPLAGDGWVPCRVLRRSLGESLGRAGKCQGGSEKSKYSWQREKLATTMESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKAHLAQLQNTEEFLHLPHHLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFSESLRTSLKVRQISLGLGHHNIYTLQPSLGLASFNG", "length": 310, "header": "tr|A0A287AVK5-1|A0A287AVK5_PIG Computationally mapped isoform of Kelch repeat and BTB domain containing 4 OS=Sus scrofa OX=9823 GN=KBTBD4 PE=4 SV=3 CANONICAL=A0A8W4FEQ2-1" }, "locus": { "chromosome": "2", "start_pos": 15041771, "end_pos": 15037235, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053378.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053378.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047944.3", "url": "https://www.ensembl.org/id/ENSSSCP00000047944.3" } ] } }, { "isoform_ac": "A0A8W4FEQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2/entry#A0A8W4FEQ2-1", "sequence": { "sequence": "MESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKAHLAQLQNTEEFLHLPHHLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFSESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSVPSLWKIASCNGSIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA", "length": 518, "header": "tr|A0A8W4FEQ2-1|A0A8W4FEQ2_PIG Isoform 1 of Kelch repeat and BTB domain containing 4 OS=Sus scrofa OX=9823 GN=KBTBD4 PE=4 SV=1 CANONICAL=A0A8W4FEQ2-1" }, "locus": { "chromosome": "2", "start_pos": 15043091, "end_pos": 15037883, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106750.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106750.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076790.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076790.1" } ] } }, { "isoform_ac": "F1SIF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ2/entry#F1SIF4-1", "sequence": { "sequence": "MKGGKADSWQREKLATTMESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKAHLAQLQNTEEFLHLPHHLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFSESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSVPSLWKIASCNGSIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA", "length": 535, "header": "tr|F1SIF4-1|A0A8W4FEQ2_PIG Computationally mapped isoform of Kelch repeat and BTB domain containing 4 OS=Sus scrofa OX=9823 GN=KBTBD4 PE=4 SV=3 CANONICAL=A0A8W4FEQ2-1" }, "locus": { "chromosome": "2", "start_pos": 15043091, "end_pos": 15036933, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014447.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014447.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014055.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014055.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 503, "start_aa": "Thr", "end_pos": 503, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr503", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIF4", "url": "https://www.uniprot.org/uniprotkb/F1SIF4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511244", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511244", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K102-1", "protein_name": "Kelch repeat and BTB domain containing 4", "gene_name": "Kbtbd4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFLVPPAGDGWALSGFFKNSLERVDSWQKEKLATMESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRADELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQSTEEFLHLPHHLLTDIISDGVPCSQNPTEAIDAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSAPSLWKIASCNGSIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA", "length": 553 }, "evidence": [ { "id": "A0A8W4FEQ2", "url": "https://omabrowser.org/oma/group/A0A8W4FEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZN64-1", "protein_name": "Kelch repeat and BTB domain containing 4", "gene_name": "KBTBD4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLAAYQYAWFPLYPEGLHNVVSGGRKPFNHDFTDCWRSDLCGTMDSSEETGGSSAEENYFVNYTFTDRSHSGRVAQGIMKLCLEDELFADVTISVEGKEFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIELQDVSESVFQLLVDYIYHGTVKLRAEELQETYEVADMYQLTALFEECSRFLARTVQVRNCLQVMWLADQHSDMGLYTAAKHCAKSHLSQLQDTEEFLHLPLRLLTDILTDGVPCSQNPTAAIETWINFNKEERAGFSETLRSSLKVIGENVHIYLIGKESSRTHSLAVSLHCADDDSISVSGQNSLCHQITAACKHGSDLYVVGGSIPRRMWKCNNATIDWEWCAPLPRDRLQHTLVSVPSKDAIYSLGGKTLQDTLSNAVIYYRVRDNVWTETSQLEVAVSGAAGVNLNGVIYLLGGEENDLDFFTKPSRLIQCYDTNTEKCHVKPYVLPFAGRMHAAVHKDVVFIVAEGDSLLCYNPLLDSFTRLCLPDAWSSVPSLWKIASCNGSIYVFRDRYKKGDANTFKLNPATSVVTVTSGIKVLLTNLQFVLA", "length": 562 }, "evidence": [ { "id": "A0A8W4FEQ2", "url": "https://omabrowser.org/oma/group/A0A8W4FEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3GYL2-1", "protein_name": "Kelch repeat and BTB domain-containing protein 4 isoform X3", "gene_name": "Kbtbd4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQSTEEFLHLPHHLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSAPSLWKIASCNGSIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA", "length": 518 }, "evidence": [ { "id": "A0A8W4FEQ2", "url": "https://omabrowser.org/oma/group/A0A8W4FEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8R179-1", "protein_name": "Kelch repeat and BTB domain-containing protein 4", "gene_name": "Kbtbd4", "tax_id": 10090, "organism": "Mus 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Cation channel sperm associated 4 OS=Sus scrofa OX=9823 GN=CATSPER4 PE=4 SV=2 CANONICAL=A0A8W4FDF3-1" }, "locus": { "chromosome": "6", "start_pos": 83627450, "end_pos": 83609395, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024815.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024815.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028118.2", "url": "https://www.ensembl.org/id/ENSSSCP00000028118.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDF3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDF3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1300642", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1300642", "resource": "Reactome", "description": "Sperm Motility And Taxes" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A0V7-1", "protein_name": "Cation channel, sperm associated 4", "gene_name": "Catsper4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"Protein" ] } ], "sequence": { "sequence": "MTDTGLRDLPEDPQKDLENDSPINTQAQDTTVPARTTEEAQTPDPASGLNQDHQEIESLGPGSTDADDQSESPAETNYGKYPKDAESENSPSLPDGEQGHQFPPESPAEDSLDPEPPEPNCSPSDMVERTDAPLVSSSAALPEDIGSRPQASQEPPVVDLQDAPCPGHSSARLDTPSQDTLRKRLLAPEAERHQQETQKLEENKENAQDTIRKINKKDFLSYGENKTGSIFLGFLVLTLVLLSSVHSYYSSPAQQVPPNPALEAFLVHFSQLKAKFPGQSSFLWQRGRKFLQKHLNASNPTEPATLIFTAAREGKETLKCLSHHVADAYTAFQKVSAIQIDGAGRTWQDSDAVKQSVDLELSSAFEKGRKAAVVHRFESLPAGSTLIFYKYCDHENAAFKDVALVLTVLLEEETLEASVGPRETEEKVRDLLWERFTNAHTPRSFNHMDSDKLSGLWSRISHLVLPVQPVRSIEEHGCFL", "length": 480, "header": "tr|A0A8W4FDX7-1|A0A8W4FDX7_PIG Isoform 1 of Torsin 1A interacting protein 2 OS=Sus scrofa OX=9823 GN=TOR1AIP2 PE=1 SV=1 CANONICAL=A0A8W4FDX7-1" }, "isoforms": [ { "isoform_ac": "A0A287AGQ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDX7/entry#A0A287AGQ8-1", "sequence": { "sequence": 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OX=9823 GN=TOR1AIP2 PE=1 SV=3 CANONICAL=A0A8W4FDX7-1" }, "locus": { "chromosome": "9", "start_pos": 121493645, "end_pos": 121481419, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030836.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030836.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023296.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023296.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDX7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDX7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDX7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDX7" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDX7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDX7" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDX7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDX7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ATPase activator activity", "id": "GO:0001671", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001671", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDX7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDX7" } ], "pmid": "" }, { "name": "ATPase binding", "id": "GO:0051117", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051117", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDX7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDX7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein localization to nuclear envelope", "id": "GO:0090435", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090435", "evidence": [ { "database": 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBB9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPGPRLLTAICGALLCASGLFAFSGPCFPNPCHNDAECEVIDDAHRGDVFTQYICKCPHGYTGIHCEIICNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGALEGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 388, "header": "tr|A0A8W4FBB9-1|A0A8W4FBB9_PIG Isoform 1 of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=1 CANONICAL=A0A8W4FBB9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZY29-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A286ZY29-1", "sequence": { "sequence": "MCICSMSGEEVRAPGSEPPKRRLPRPRPPTMPGPRLLTAICGALLCASGLFAFSGDFCDSSQCLNGGTCLLDQDPQNPFHCLCPEGFTGLICNETEKGPCFPNPCHNDAECEVIDDAHRGDVFTQYICKCPHGYTGIHCEIICNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGALEGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 461, "header": "tr|A0A286ZY29-1|A0A286ZY29_PIG Computationally mapped isoform of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=1 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54571453, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044002.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044002.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036522.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036522.1" } ] } }, { "isoform_ac": "A0A4X1U5W0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A4X1U5W0-1", "sequence": { "sequence": "MVFWPSETALPGKPQQMTGFSEPHHPSCEMGTIRGSDGGEEVRAPGSEPPKRRLPRPRPPTMPGPRLLTAICGALLCASGLFAFSGDFCDSSQCLNGGTCLLDQDPQNPFHCLCPEGFTGLICNETEKGPCFPNPCHNDAECEVIDDAHRGDVFTQYICKCPHGYTGIHCEIICNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGALEGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 492, "header": "tr|A0A4X1U5W0-1|A0A4X1U5W0_PIG Computationally mapped isoform of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=1 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54571051, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047898.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047898.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043923.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043923.1" } ] } }, { "isoform_ac": "A0A4X1U6J0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A4X1U6J0-1", "sequence": { "sequence": "MPGPRLLTAICGALLCASGLFAFSGDFCDSSQCLNGGTCLLDQDPQNPFHCLCPEGFTGLICNETEKGPCFPNPCHNDAECEVIDDAHRGDVFTQYICKCPHGYTGIHCEIICNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 379, "header": "tr|A0A4X1U6J0-1|A0A4X1U6J0_PIG Computationally mapped isoform of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=1 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54554837, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002056.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002056.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002007.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002007.3" } ] } }, { "isoform_ac": "A0A5G2QNF2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A5G2QNF2-1", "sequence": { "sequence": "MPGPRLLTAICGALLCASGLFAFSVCNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGALEGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 344, "header": "tr|A0A5G2QNF2-1|A0A8W4FBB9_PIG Computationally mapped isoform of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=2 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54554837, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083278.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083278.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066428.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066428.2" } ] } }, { "isoform_ac": "A0A5G2QXS8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A5G2QXS8-1", "sequence": { "sequence": "MPGPRLLTAICGALLCASGLFAFSGPCFPNPCHNDAECEVIDDAHRGDVFTQYICKCPHGYTGIHCEIICNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGAGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 386, "header": "tr|A0A5G2QXS8-1|A0A8W4FBB9_PIG Computationally mapped isoform of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=1 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54554837, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084547.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084547.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068947.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068947.1" } ] } }, { "isoform_ac": "A0A5G2RKJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A5G2RKJ7-1", "sequence": { "sequence": "MLRAPGSEPPKRRLPRPRPPTMPGPRLLTAICGALLCASGLFAFSGDFCDSSQCLNGGTCLLDQDPQNPFHCLCPEGFTGLICNETEKGPCFPNPCHNDAECEVIDDAHRGDVFTQYICKCPHGYTGIHCEIICNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGALEGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 452, "header": "tr|A0A5G2RKJ7-1|A0A8W4FBB9_PIG Computationally mapped isoform of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=2 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54555188, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083646.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083646.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072652.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072652.1" } ] } }, { "isoform_ac": "A0A8W4F8T1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A8W4F8T1-1", "sequence": { "sequence": "MSAHLVWNLPAAWAPDPHESARPGVPAPQSSLSLFCNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGALEGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 354, "header": "tr|A0A8W4F8T1-1|A0A8W4FBB9_PIG Computationally mapped isoform of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=1 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54549059, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105707.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105707.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075230.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075230.1" } ] } }, { "isoform_ac": "A0A8W4FBB9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9/entry#A0A8W4FBB9-1", "sequence": { "sequence": "MPGPRLLTAICGALLCASGLFAFSGPCFPNPCHNDAECEVIDDAHRGDVFTQYICKCPHGYTGIHCEIICNAPLGMETGAIADFQISASSMHLGFMGLQRWAPELARLHRAGIVNAWTASNYDRNPWIQVNLLRRMRVTGVVTQGASRAGSAEYIKTFKVAYSSDGRKFQFIQGAEESGDKIFMGNLDNSGLKVNLFEVPLEVQYVRLVPIICHRGCTLRFELLGCELSGCAEPLGLKDNTIPNKQITASSFYRTWGLSAFSWYPFYARLDNQGKFNAWTAQSNSASEWLQIDLGSQRRVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQGALEGKIFPGNLDNNSHKKNMFETPFLTRFVRILPVAWHNRITLRVELLGC", "length": 388, "header": "tr|A0A8W4FBB9-1|A0A8W4FBB9_PIG Isoform 1 of Milk fat globule EGF and factor V/VIII domain containing OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=1 CANONICAL=A0A8W4FBB9-1" }, "locus": { "chromosome": "7", "start_pos": 54554837, "end_pos": 54540557, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102293.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102293.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075590.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075590.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNF2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNF2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-381426", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "resource": "Reactome", "description": "Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" }, { "id": "R-SSC-8957275", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "resource": "Reactome", "description": "Post-translational protein phosphorylation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9TCV4-1", "protein_name": "Milk fat globule EGF and factor V/VIII domain containing", "gene_name": "MFGE8", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPCPRLLAALCGALFCSSGLFAFSGPCFPNPCHNDAECQVTDDSHRGDVFIQYICKCPLGYVGIHCETTCTSPLGMQTGAIADSQISASSMHLGFMGLQRWAPELARLHQTGIVNAWTSGNYDKNPWIQVNLMRKMWVTGVVTQGASRAGSAEYLKTFKVAYSTDGRQFQFIQVAGRSGDKIFIGNVNNSGLKINLFDTPLETQYVRLVPIICHRGCTLRFELLGCELNGCTEPLGLKDNTIPNKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC", "length": 388 }, "evidence": [ { "id": "A0A8W4FBB9", "url": "https://omabrowser.org/oma/group/A0A8W4FBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1C0K5-1", "protein_name": "Milk fat globule EGF and factor V/VIII domain containing", "gene_name": "MFGE8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKTVRQWRAPLLLALGLTLLVVVAGDFCSVNYCQNGGTCLTGINETPFFCICPEGFVGIDCNETEKGPCHPNPCHNNGECQLVPNRGDVFTDYICKCPTGYDGVHCQNNKNECSSEPCKNGGTCVDMDGDYACKCPSPFFGKTCHARCAIPLGMEGGAISDAQLSASSVYYGFLGLQRWGPELARLNNHGIVNAWTSSNYDKSPWIQANLLRKMRLSGVITQGARRVGKAEYVRAYKVAYSLDGREFTFYKDEKLNTDKVFQGNVDYGTMQTNMFDPPITAQYIRIYPVVCRRACTLRLELIGCEMNVYFNTAGCSEPLGMKSRLISDQQITASSVFKTWGIDAFTWYPHYARLDKMGKTNAWTALHNDQSEWLQIDLRDQKKVTGIVTQGARDFGHIQYVAAYKVAYSDNGTSWTVYRDSQTNSTKIFHGNSDNYSHKKNVFDVPFHARFVRILPVAWHNRITLRVELLGCDE", "length": 474 }, "evidence": [ { "id": "A0A8W4FBB9", "url": "https://omabrowser.org/oma/group/A0A8W4FBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P21956-1", "protein_name": "Lactadherin", "gene_name": "Mfge8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQVSRVLAALCGMLLCASGLFAASGDFCDSSLCLNGGTCLTGQDNDIYCLCPEGFTGLVCNETERGPCSPNPCYNDAKCLVTLDTQRGDIFTEYICQCPVGYSGIHCETETNYYNLDGEYMFTTAVPNTAVPTPAPTPDLSNNLASRCSTQLGMEGGAIADSQISASSVYMGFMGLQRWGPELARLYRTGIVNAWTASNYDSKPWIQVNLLRKMRVSGVMTQGASRAGRAEYLKTFKVAYSLDGRKFEFIQDESGGDKEFLGNLDNNSLKVNMFNPTLEAQYIKLYPVSCHRGCTLRFELLGCELHGCSEPLGLKNNTIPDSQMSASSSYKTWNLRAFGWYPHLGRLDNQGKINAWTAQSNSAKEWLQVDLGTQRQVTGIITQGARDFGHIQYVASYKVAHSDDGVQWTVYEEQGSSKVFQGNLDNNSHKKNIFEKPFMARYVRVLPVSWHNRITLRLELLGC", "length": 463 }, "evidence": [ { "id": "A0A8W4FBB9", "url": "https://omabrowser.org/oma/group/A0A8W4FBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q08431-1", "protein_name": "Lactadherin", "gene_name": "MFGE8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKGYAGNHCETKCVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKEFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVTGIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWDNHSHKKNLFETPILARYVRILPVAWHNRIALRLELLGC", "length": 387 }, "evidence": [ { "id": "A0A8W4FBB9", "url": "https://omabrowser.org/oma/group/A0A8W4FBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBB9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBB9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBB9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9" } ], "pmid": "" }, { "name": "external side of plasma membrane", "id": "GO:0009897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009897", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBB9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBB9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBB9" } ], "pmid": "" }, { "name": 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"Protein Classification" ] }, { "id": "IPR044101", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044101", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156637", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156637", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VSMAELX", "url": "https://omabrowser.org/oma/group/VSMAELX/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZJH8", "url": "https://www.orthodb.org/?gene=A0A286ZJH8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45805", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45805", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45805:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45805:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00104", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00104", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00105", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00105", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-383280", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-383280", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-4090294", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4090294", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001928189", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928189", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZJH8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJH8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QH74", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH74", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QH74-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QH74-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFK4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFK4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F919", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F919", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F919-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F919-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPD8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPD8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPD8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPD8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S075", "url": "https://www.uniprot.org/uniprotkb/F1S075", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S075-1", "url": "https://www.uniprot.org/uniprotkb/F1S075-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 468, "header": "tr|A0A286ZJH8-1|A0A286ZJH8_PIG Isoform 1 of RAR related orphan receptor A OS=Sus scrofa OX=9823 GN=RORA PE=1 SV=1 CANONICAL=A0A286ZJH8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJH8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8/entry#A0A286ZJH8-1", "sequence": { "sequence": "MMYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 468, "header": "tr|A0A286ZJH8-1|A0A286ZJH8_PIG Isoform 1 of RAR related orphan receptor A OS=Sus scrofa OX=9823 GN=RORA PE=1 SV=1 CANONICAL=A0A286ZJH8-1" }, "locus": { "chromosome": "1", "start_pos": 111473340, "end_pos": 111375562, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057944.2", "url": "https://www.ensembl.org/id/ENSSSCT00000057944.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031686.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031686.1" } ] } }, { "isoform_ac": "A0A5G2QH74-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8/entry#A0A5G2QH74-1", "sequence": { "sequence": "LENVINWLRASVAAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 471, "header": "tr|A0A5G2QH74-1|A0A286ZJH8_PIG Computationally mapped isoform of RAR related orphan receptor A OS=Sus scrofa OX=9823 GN=RORA PE=1 SV=1 CANONICAL=A0A286ZJH8-1" }, "locus": { "chromosome": "1", "start_pos": 111473340, "end_pos": 111435985, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083166.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083166.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063180.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063180.1" } ] } }, { "isoform_ac": "A0A5G2RFK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8/entry#A0A5G2RFK4-1", "sequence": { "sequence": "MNRNAFIRCLKENVINWLRASVAAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 481, "header": "tr|A0A5G2RFK4-1|A0A286ZJH8_PIG Computationally mapped isoform of RAR related orphan receptor A OS=Sus scrofa OX=9823 GN=RORA PE=1 SV=2 CANONICAL=A0A286ZJH8-1" }, "locus": { "chromosome": "1", "start_pos": 111473340, "end_pos": 111436702, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080573.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080573.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069819.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069819.2" } ] } }, { "isoform_ac": "A0A8W4F919-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8/entry#A0A8W4F919-1", "sequence": { "sequence": "MDFSVFGPAIESPAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDGYGPFFCLDFLIVDLCSQQKAGTKVGGCPFLVAHCPQTFDRVTNLSVTTESPALIGDWCA", "length": 530, "header": "tr|A0A8W4F919-1|A0A286ZJH8_PIG Computationally mapped isoform of RAR related orphan receptor A OS=Sus scrofa OX=9823 GN=RORA PE=1 SV=1 CANONICAL=A0A286ZJH8-1" }, "locus": { "chromosome": "1", "start_pos": 111473744, "end_pos": 111427434, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092451.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092451.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074790.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074790.1" } ] } }, { "isoform_ac": "A0A8W4FPD8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8/entry#A0A8W4FPD8-1", "sequence": { "sequence": "VDFSLPSELQSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDGYGPFFCLDFLIVDLCSQQKAGTKVGGCPFLVAHCPQTFDRVTNLSVTTESPALIGDWCA", "length": 527, "header": "tr|A0A8W4FPD8-1|A0A8W4FPD8_PIG Computationally mapped isoform of RAR related orphan receptor A OS=Sus scrofa OX=9823 GN=RORA PE=1 SV=1 CANONICAL=A0A286ZJH8-1" }, "locus": { "chromosome": "1", "start_pos": 111473744, "end_pos": 111436412, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104420.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104420.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080783.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080783.1" } ] } }, { "isoform_ac": "F1S075-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH8/entry#F1S075-1", "sequence": { "sequence": "IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 453, "header": "tr|F1S075-1|F1S075_PIG Computationally mapped isoform of RAR related orphan receptor A OS=Sus scrofa OX=9823 GN=RORA PE=1 SV=5 CANONICAL=A0A286ZJH8-1" }, "locus": { "chromosome": "1", "start_pos": 111473340, "end_pos": 111436844, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005055.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005055.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004933.5", "url": "https://www.ensembl.org/id/ENSSSCP00000004933.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F919", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F919" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156637", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156637", "resource": "KEGG Pathway" }, { "id": "R-SSC-383280", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-383280", "resource": "Reactome", "description": "Nuclear Receptor transcription pathway" }, { "id": "R-SSC-4090294", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4090294", "resource": "Reactome", "description": "SUMOylation of intracellular receptors" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NML9-1", "protein_name": "RAR related orphan receptor A", "gene_name": "RORA", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MMCFVLAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLIAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 468 }, "evidence": [ { "id": "A0A286ZJH8", "url": "https://omabrowser.org/oma/group/A0A286ZJH8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1QLY4-1", "protein_name": "Nuclear receptor ROR-alpha A", "gene_name": "roraa", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTPTYGLSTNGLTELHDDLSGYMNGHTPDGTKPDSGVSSFYLDIQPSPDQSGLDINGIKPEPICDFTPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFLQEEVENYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAFDPQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG", "length": 468 }, "evidence": [ { "id": "A0A286ZJH8", "url": "https://omabrowser.org/oma/group/A0A286ZJH8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P35398-2", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "RORA", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESAPAAPDPAASEPGSSGADAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 523 }, "evidence": [ { "id": "A0A286ZJH8", "url": "https://omabrowser.org/oma/group/A0A286ZJH8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P51448-1", "protein_name": "Nuclear receptor ROR-alpha", "gene_name": "Rora", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESAPAAPDPAASEPGSSGSEAAAGSRETPLTQDTGRKSEAPGAGRRQSYASSSRGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG", "length": 523 }, "evidence": [ { "id": "A0A286ZJH8", "url": "https://omabrowser.org/oma/group/A0A286ZJH8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJH8", "url": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AH59-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AH59-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHJ8", "url": "https://www.uniprot.org/uniprotkb/A0A287AHJ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHJ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR75", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR75-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR75-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9G3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9G3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9G3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9G3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDM0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDM0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDM0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDM0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RI88", "url": "https://www.uniprot.org/uniprotkb/F1RI88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RI88-1", "url": "https://www.uniprot.org/uniprotkb/F1RI88-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKDRLEQLKAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKAREETKRAVKYQGQARKLFLSFPLHLLAVWLSLPALHHHPGH", "length": 287, "header": "tr|A0A286ZQQ0-1|A0A286ZQQ0_PIG Isoform 1 of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=1 CANONICAL=A0A286ZQQ0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#A0A286ZQQ0-1", "sequence": { "sequence": "MKDRLEQLKAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKAREETKRAVKYQGQARKLFLSFPLHLLAVWLSLPALHHHPGH", "length": 287, "header": "tr|A0A286ZQQ0-1|A0A286ZQQ0_PIG Isoform 1 of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=1 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11739516, "end_pos": 11699321, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044532.2", "url": "https://www.ensembl.org/id/ENSSSCT00000044532.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033948.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033948.1" } ] } }, { "isoform_ac": "A0A287AF60-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#A0A287AF60-1", "sequence": { "sequence": "MFGLSVPFTELHSKSTGHVIVPEKEDKLGRGKRQWRCGGGEEIKREGQCEASRRLGTRMKDRLEQLKAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKAREETKRAVKYQGQARKKLIIIIVVVVVLLGILALIIGLSVGLK", "length": 347, "header": "tr|A0A287AF60-1|A0A287AF60_PIG Computationally mapped isoform of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=2 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11740689, "end_pos": 11702156, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053592.2", "url": "https://www.ensembl.org/id/ENSSSCT00000053592.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042626.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042626.2" } ] } }, { "isoform_ac": "A0A287AH59-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#A0A287AH59-1", "sequence": { "sequence": "MKDRLEQLKAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQSLISLQPCGATLVVFSWERSVHGFPERESGTRSFVSL", "length": 262, "header": "tr|A0A287AH59-1|A0A287AH59_PIG Computationally mapped isoform of Syntaxin 3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=1 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11739516, "end_pos": 11699180, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039939.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039939.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043213.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043213.1" } ] } }, { "isoform_ac": "A0A287AHJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#A0A287AHJ8-1", "sequence": { "sequence": "MFGLSVPFTELHSKSTGHVIVPEKEDKLGRGKRQWRCGGGEEIKREGQCEASRRLGTRMKDRLEQLKAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGAMIDRIENNMDQSVGFVERAVADTKKAVKYQSEARRKKIMIMICCVILAIILASTIGGIFA", "length": 345, "header": "tr|A0A287AHJ8-1|A0A287AHJ8_PIG Computationally mapped isoform of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=2 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11740689, "end_pos": 11696925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044663.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044663.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043335.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043335.2" } ] } }, { "isoform_ac": "A0A5G2QR75-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#A0A5G2QR75-1", "sequence": { "sequence": "MHLNIVEKGLGTWGPNPEDELESAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKAREETKRAVKYQGQARKVRLWHCLWRRGSIVCAVSCSLSLSLSSPPCSSLSPSLFLLLPPLVSGGREP", "length": 327, "header": "tr|A0A5G2QR75-1|A0A286ZQQ0_PIG Computationally mapped isoform of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=1 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11722065, "end_pos": 11703609, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070704.1", "url": "https://www.ensembl.org/id/ENSSSCT00000070704.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067254.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067254.1" } ] } }, { "isoform_ac": "A0A8W4F9G3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#A0A8W4F9G3-1", "sequence": { "sequence": "MYHRAALSFKGEYKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKAREETKRAVKYQGQARKVRLWHCLWRRGSIVCAVSCSLSLSLSSPPCSSLSPSLFLLLPPLVSGGREP", "length": 316, "header": "tr|A0A8W4F9G3-1|A0A286ZQQ0_PIG Computationally mapped isoform of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=1 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11721639, "end_pos": 11703609, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103177.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103177.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076034.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076034.1" } ] } }, { "isoform_ac": "A0A8W4FDM0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#A0A8W4FDM0-1", "sequence": { "sequence": "MFGLSVPFTELHSKSTGHVIVPEKEDKLGRGKRQWRCGGGEEIKREGQCEEPAHFSGRMKDRLEQLKAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKAREETKRAVKYQGQARKVRLWHCLWRRGSIVCAVSCSLSLSLSSPPCSSLSPSLFLLLPPLVSGGREP", "length": 371, "header": "tr|A0A8W4FDM0-1|A0A286ZQQ0_PIG Computationally mapped isoform of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=1 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11740689, "end_pos": 11703609, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096390.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096390.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077351.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077351.1" } ] } }, { "isoform_ac": "F1RI88-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0/entry#F1RI88-1", "sequence": { "sequence": "MFGLSVPFTELHSKSTGHVIVPEKEDKLGRGKRQWRCGGGEEIKREGQCEASRRLGTRMKDRLEQLKAKQLTQDDDADEVEIAVDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGAMIDRIENNMDQSVGFVERAVADTKKAVKYQSEARRLFLSFPLHLLAVWLSLPALHHHPGH", "length": 345, "header": "tr|F1RI88-1|F1RI88_PIG Computationally mapped isoform of Syntaxin-3 OS=Sus scrofa OX=9823 GN=STX3 PE=1 SV=5 CANONICAL=A0A286ZQQ0-1" }, "locus": { "chromosome": "2", "start_pos": 11740689, "end_pos": 11699321, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014339.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014339.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000013953.5", "url": "https://www.ensembl.org/id/ENSSSCP00000013953.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDM0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDM0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-449836", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-449836", "resource": "Reactome", "description": "Other interleukin signaling" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 20, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "cell-cell junction", "id": "GO:0005911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005911", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "lamellipodium", "id": "GO:0030027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030027", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "melanosome", "id": "GO:0042470", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042470", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "postsynapse", "id": "GO:0098794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098794", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "specific granule", "id": "GO:0042581", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042581", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "photoreceptor inner segment", "id": "GO:0001917", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001917", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQQ0" } ], "pmid": "" }, { "name": "azurophil granule", "id": "GO:0042582", "url": 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"MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASAGYGGYSSQTLPSQAGATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSIHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPARYSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRDFPGLSDDYYGAKNLKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 817, "header": "tr|A0A286ZJC1-1|A0A286ZJC1_PIG Isoform 1 of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=1 CANONICAL=A0A286ZJC1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#A0A286ZJC1-1", "sequence": { "sequence": "MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASAGYGGYSSQTLPSQAGATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSIHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPARYSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRDFPGLSDDYYGAKNLKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 817, "header": "tr|A0A286ZJC1-1|A0A286ZJC1_PIG Isoform 1 of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=1 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56472317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066103.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066103.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031674.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031674.1" } ] } }, { "isoform_ac": "A0A287A585-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#A0A287A585-1", "sequence": { "sequence": "MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASAGYGGYSSQTLPSQAGATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSIHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPARYSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRDFPGLSDDYYGAKNLSKGGRTGHLVGALADCLRSLSPVHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 822, "header": "tr|A0A287A585-1|A0A287A585_PIG Computationally mapped isoform of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=2 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56472317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043191.2", "url": "https://www.ensembl.org/id/ENSSSCT00000043191.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038962.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038962.2" } ] } }, { "isoform_ac": "A0A287AI23-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#A0A287AI23-1", "sequence": { "sequence": "MERAPKFSGSGLALGLGSASASAWRRASQRWAWPLRSLRPGGDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQESSVQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 512, "header": "tr|A0A287AI23-1|A0A287AI23_PIG Computationally mapped isoform of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=1 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56479355, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051267.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051267.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043519.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043519.1" } ] } }, { "isoform_ac": "A0A5G2QLD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#A0A5G2QLD0-1", "sequence": { "sequence": "MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASAGYGGYSSQTLPSQAGATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSIHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPARYSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQESSVQERKGGRTGHLVGALADCLRSLSPVHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 840, "header": "tr|A0A5G2QLD0-1|A0A286ZJC1_PIG Computationally mapped isoform of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=1 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56472317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076552.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076552.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064835.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064835.1" } ] } }, { "isoform_ac": "A0A5G2QMQ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#A0A5G2QMQ7-1", "sequence": { "sequence": "MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASAGYGGYSSQTLPSQAGATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSIHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPARYSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRDALPHLSSGSRASVLGRRGGRTGHLVGALADCLRSLSPVHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 823, "header": "tr|A0A5G2QMQ7-1|A0A286ZJC1_PIG Computationally mapped isoform of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=2 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56472317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089838.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089838.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065328.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065328.2" } ] } }, { "isoform_ac": "A0A5G2RKC2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#A0A5G2RKC2-1", "sequence": { "sequence": "MERAPKFSGSGLALGLGSASASAWRRASQRWAWPLRSLRPGGDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQESSVQEQGVTSNTSDSESSHLVGALADCLRSLSPVHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 509, "header": "tr|A0A5G2RKC2-1|A0A286ZJC1_PIG Computationally mapped isoform of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=1 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56479355, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079753.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079753.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072517.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072517.1" } ] } }, { "isoform_ac": "A0A8W4FJR4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#A0A8W4FJR4-1", "sequence": { "sequence": "PNPQPHDDHFIFHSVSRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQESSSRSFTAMTGHLVGALADCLRSLSPVHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 349, "header": "tr|A0A8W4FJR4-1|A0A8W4FJR4_PIG Computationally mapped isoform of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=1 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56517458, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105978.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105978.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079568.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079568.1" } ] } }, { "isoform_ac": "F1RTL4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC1/entry#F1RTL4-1", "sequence": { "sequence": "MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPGGGNGASAGYGGYSSQTLPSQAGATPTPRTKAKLIPTGRDVGPVPPKPVPGKSTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSIHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVSYPAPPQVPPARYSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQESSVQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQSQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL", "length": 849, "header": "tr|F1RTL4-1|A0A286ZJC1_PIG Computationally mapped isoform of Discs large MAGUK scaffold protein 3 OS=Sus scrofa OX=9823 GN=DLG3 PE=1 SV=3 CANONICAL=A0A286ZJC1-1" }, "locus": { "chromosome": "X", "start_pos": 56527854, "end_pos": 56472317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013532.4", "url": "https://www.ensembl.org/id/ENSSSCT00000013532.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000013170.3", "url": "https://www.ensembl.org/id/ENSSSCP00000013170.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 68, "start_aa": "Thr", "end_pos": 68, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr68", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1RTL4", "url": "https://www.uniprot.org/uniprotkb/F1RTL4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516124", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516124", "resource": "KEGG Pathway" }, { "id": "R-SSC-438066", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-438066", "resource": "Reactome", "description": "Unblocking of NMDA receptors, glutamate binding and activation" }, { "id": "R-SSC-451308", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-451308", "resource": "Reactome", "description": "Activation of Ca-permeable Kainate Receptor" }, { "id": "R-SSC-5673001", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5673001", "resource": "Reactome", "description": "RAF/MAP kinase cascade" }, { "id": "R-SSC-6794361", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6794361", "resource": "Reactome", "description": "Neurexins and neuroligins" }, { "id": "R-SSC-8849932", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8849932", "resource": "Reactome", "description": "Synaptic adhesion-like molecules" } ], "orthologs": [ { "uniprot_canonical_ac": "P70175-1", "protein_name": "Disks large homolog 3", "gene_name": "Dlg3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"https://www.ebi.ac.uk/interpro/entry/IPR019734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156057", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156057", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZMW1", "url": "https://www.orthodb.org/?gene=A0A286ZMW1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44177", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44177", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44177:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44177:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13181", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13181", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13424", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13424", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5620922", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620922", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001927116", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927116", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZMW1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0Z4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Z4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0Z4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Z4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3M3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3M3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3M3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3M3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7R9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7R9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7R9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7R9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDY6", "url": "https://www.uniprot.org/uniprotkb/F1SDY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDY6-1", "url": "https://www.uniprot.org/uniprotkb/F1SDY6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSEMEPLLLAWSYFRRRKFQLCTDLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVHQEGIAEMVLDENAIAQVPRPGTSLKLPGTNQTGGPSPAVRPITQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLAKYAQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYISLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNIPSATEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEVADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNHHAEAYNNLAVLEMRKGHVDQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLKRHFAML", "length": 505, "header": "tr|A0A286ZMW1-1|A0A286ZMW1_PIG Isoform 1 of Tetratricopeptide repeat protein 8 OS=Sus scrofa OX=9823 GN=TTC8 PE=4 SV=2 CANONICAL=A0A286ZMW1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMW1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1/entry#A0A286ZMW1-1", "sequence": { "sequence": "MGSEMEPLLLAWSYFRRRKFQLCTDLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVHQEGIAEMVLDENAIAQVPRPGTSLKLPGTNQTGGPSPAVRPITQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLAKYAQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYISLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNIPSATEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEVADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNHHAEAYNNLAVLEMRKGHVDQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLKRHFAML", "length": 505, "header": "tr|A0A286ZMW1-1|A0A286ZMW1_PIG Isoform 1 of Tetratricopeptide repeat protein 8 OS=Sus scrofa OX=9823 GN=TTC8 PE=4 SV=2 CANONICAL=A0A286ZMW1-1" }, "locus": { "chromosome": "7", "start_pos": 110783498, "end_pos": 110731827, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062243.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062243.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032964.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032964.2" } ] } }, { "isoform_ac": "A0A5G2R0Z4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1/entry#A0A5G2R0Z4-1", "sequence": { "sequence": "MGSEMEPLLLAWSYFRRRKFQLCTDLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVHQEGIAEMVLDENAIAQVPRPGTSLKLPGTNQTGGPSPAVRPITQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYISLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNIPSATEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEVADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNHHAEAYNNLAVLEMRKGHVDQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLKRHFAML", "length": 475, "header": "tr|A0A5G2R0Z4-1|A0A286ZMW1_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 8 OS=Sus scrofa OX=9823 GN=TTC8 PE=4 SV=1 CANONICAL=A0A286ZMW1-1" }, "locus": { "chromosome": "7", "start_pos": 110783498, "end_pos": 110731827, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085532.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085532.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067881.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067881.1" } ] } }, { "isoform_ac": "A0A5G2R3M3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1/entry#A0A5G2R3M3-1", "sequence": { "sequence": "MGSEMEPLLLAWSYFRRRKFQLCTDLCTQMLEKSPYDQEMNNIPSATEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEVADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNHHAEAYNNLAVLEMRKGHVDQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLKRHFAML", "length": 250, "header": "tr|A0A5G2R3M3-1|A0A286ZMW1_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 8 OS=Sus scrofa OX=9823 GN=TTC8 PE=4 SV=1 CANONICAL=A0A286ZMW1-1" }, "locus": { "chromosome": "7", "start_pos": 110783498, "end_pos": 110731827, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068311.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068311.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071803.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071803.1" } ] } }, { "isoform_ac": "A0A5G2R7R9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1/entry#A0A5G2R7R9-1", "sequence": { "sequence": "MLEKSPYDQAAWILKARALTEMVYIDEIDVHQEGIAEMVLDENAIAQVPRPGTSLKLPGTNQTGGPSPAVRPITQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLAKYAQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYISLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNIPSATEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEVADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNHHAEAYNNLAVLEMRKGHIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLKRHFAML", "length": 445, "header": "tr|A0A5G2R7R9-1|A0A286ZMW1_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 8 OS=Sus scrofa OX=9823 GN=TTC8 PE=4 SV=2 CANONICAL=A0A286ZMW1-1" }, "locus": { "chromosome": "7", "start_pos": 110783498, "end_pos": 110731914, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083404.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083404.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073120.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073120.2" } ] } }, { "isoform_ac": "F1SDY6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1/entry#F1SDY6-1", "sequence": { "sequence": "MGSEMEPLLLAWSYFRRRKFQLCTDLCTQMLEKSPYDQEPDPELPVSQAAWILKARALTEMVYIDEIDVHQEGIAEMVLDENAIAQVPRPGTSLKLPGTNQTGGPSPAVRPITQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLAKYAQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYISLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNIPSATEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYNCQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEVADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNHHAEAYNNLAVLEMRKGHVDQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLKRHFAML", "length": 515, "header": "tr|F1SDY6-1|A0A286ZMW1_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 8 OS=Sus scrofa OX=9823 GN=TTC8 PE=4 SV=3 CANONICAL=A0A286ZMW1-1" }, "locus": { "chromosome": "7", "start_pos": 110783498, "end_pos": 110731827, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002697.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002697.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002628.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002628.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDY6", "url": "https://www.uniprot.org/uniprotkb/F1SDY6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156057", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156057", "resource": "KEGG Pathway" }, { "id": "R-SSC-5620922", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620922", "resource": "Reactome", "description": "BBSome-mediated cargo-targeting to cilium" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "sensory perception", "id": "GO:0007600", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007600", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "non-motile cilium assembly", "id": "GO:1905515", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905515", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "anatomical structure morphogenesis", "id": "GO:0009653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009653", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "fat cell differentiation", "id": "GO:0045444", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045444", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "establishment of anatomical structure orientation", "id": "GO:0048560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048560", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "centriolar satellite", "id": "GO:0034451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034451", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "ciliary membrane", "id": "GO:0060170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060170", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "BBSome", "id": "GO:0034464", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034464", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "non-motile cilium", "id": "GO:0097730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097730", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" }, { "name": "photoreceptor connecting cilium", "id": "GO:0032391", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032391", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW1" } ], "pmid": "" } ] }, { "name": "Molecular 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"lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 166, "end_pos": 168 }, { "start_pos": 90, "end_pos": 92 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZIZ1-1", "uniprot_ac": "A0A286ZIZ1", "uniprot_id": "A0A286ZIZ1_PIG", "mass": { "chemical_mass": 137697.0, "monoisotopic_mass": 137697.0 }, "refseq": {}, "gene_names": [ { "name": "KCNT1", "type": "recommended", "evidence": [ { "id": "A0A286ZIZ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1" } ] } ], "protein_names": [ { "name": "Potassium sodium-activated channel subfamily T member 1", "type": "synonym", "evidence": [ { "id": "A0A286ZIZ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIZ1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KCNT1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1", "locus": {} } ], "crossref": [ { "id": "A0A286ZIZ1", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZIZ1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005762", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005762", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519817", "url": "https://www.ncbi.nlm.nih.gov/gene/100519817", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003148", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003148", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003929", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003929", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013099", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013099", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047871", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047871", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519817", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519817", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR10027", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10027", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10027:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10027:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03493", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03493", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07885", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07885", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22614", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22614", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "29463", "url": "https://www.rhea-db.org/rhea/29463", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZIZ1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIZ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFL6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFL6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFL6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUA7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUA7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUA7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUA7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9N4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9N4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9N4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9N4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RA71", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RA71-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA71-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RZZ8", "url": "https://www.uniprot.org/uniprotkb/F1RZZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RZZ8-1", "url": "https://www.uniprot.org/uniprotkb/F1RZZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDLDSEVLPLPPRYRFRDLLLGDPSFQNDDRLHVEDFSLDSSLSQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGCWGCPKHNYTFNESSSEINWAPILWVERKMTLWAIQVVVAIISFLETILLIYLSYKGNIWEQVLRVSFVLEMVNTLPFIITIFWAPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGDNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKFAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHVRMGDSKFFQEYEGKSFTYAAFHAHKKYGVCLIGLKREDNKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQKRRGLAGQGLYEGSARLPVHSIIASVGTVAMDLQNAECRPAQSGGGCAGSKLALPTENGSGSRRPSIAPVLELADTSALLPCDLLSDQSEDEMLPSEDEGLSMVEYVRGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQSGVIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMKITEEDLWIRTYGRLFQKLCSSSAEVPIGIYRTESHVFSSEPHDLRAQSQISVSVEDGEDTRDVKGSWGARVGTGGGSAHGKHAAGGDPAEHPLLRRKSLPWARRLSRKGSRPSGKAAAEWISQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEMNDHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASGSQSRKSSCSNKLASCNPETRDETQL", "length": 1216, "header": "tr|A0A286ZIZ1-1|A0A286ZIZ1_PIG Isoform 1 of Potassium sodium-activated channel subfamily T member 1 OS=Sus scrofa OX=9823 GN=KCNT1 PE=4 SV=2 CANONICAL=A0A286ZIZ1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIZ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1/entry#A0A286ZIZ1-1", "sequence": { "sequence": "MSDLDSEVLPLPPRYRFRDLLLGDPSFQNDDRLHVEDFSLDSSLSQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGCWGCPKHNYTFNESSSEINWAPILWVERKMTLWAIQVVVAIISFLETILLIYLSYKGNIWEQVLRVSFVLEMVNTLPFIITIFWAPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGDNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKFAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHVRMGDSKFFQEYEGKSFTYAAFHAHKKYGVCLIGLKREDNKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQKRRGLAGQGLYEGSARLPVHSIIASVGTVAMDLQNAECRPAQSGGGCAGSKLALPTENGSGSRRPSIAPVLELADTSALLPCDLLSDQSEDEMLPSEDEGLSMVEYVRGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQSGVIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMKITEEDLWIRTYGRLFQKLCSSSAEVPIGIYRTESHVFSSEPHDLRAQSQISVSVEDGEDTRDVKGSWGARVGTGGGSAHGKHAAGGDPAEHPLLRRKSLPWARRLSRKGSRPSGKAAAEWISQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEMNDHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASGSQSRKSSCSNKLASCNPETRDETQL", "length": 1216, "header": "tr|A0A286ZIZ1-1|A0A286ZIZ1_PIG Isoform 1 of Potassium sodium-activated channel subfamily T member 1 OS=Sus scrofa OX=9823 GN=KCNT1 PE=4 SV=2 CANONICAL=A0A286ZIZ1-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1811259, "end_pos": 1761090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040143.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040143.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031413.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031413.2" } ] } }, { "isoform_ac": "A0A5G2QFL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1/entry#A0A5G2QFL6-1", "sequence": { "sequence": "MARAKLPRSPSESKAGPGGAPAGASAPEEPHGLSPLLPARGGGSVGSDVGQRLHVEDFSLDSSLSQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGCWGCPKHNYTFNESSSEINWAPILWVERKMTLWAIQVVVAIISFLETILLIYLSYKGNIWEQVLRVSFVLEMVNTLPFIITIFWAPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGDNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKFAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHVRMGDSKFFQEYEGKSFTYAAFHAHKKYGVCLIGLKREDNKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQKRRGLAGQGLYEGSARLPVHSIIASVGTVAMDLQNAECRPAQSGGGCAGSKLALPTENGSGSRRPSIAPVLELADTSALLPCDLLSDQSEDEMLPSEDEGLSMVEYVRGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQSGVIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMKITEEDLWIRTYGRLFQKLCSSSAEVPIGIYRTESHVFSSEPHDLRAQSQISVSVEDGEDTRDVKGSWGARVGTGGGSAHGKHAAGGDPAEHPLLRRKSLPWARRLSRKGSRPSGKAAAEWISQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEMNDHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASGSQSRKSSCSNKLASCNPETRDETQL", "length": 1236, "header": "tr|A0A5G2QFL6-1|A0A286ZIZ1_PIG Computationally mapped isoform of Potassium sodium-activated channel subfamily T member 1 OS=Sus scrofa OX=9823 GN=KCNT1 PE=4 SV=1 CANONICAL=A0A286ZIZ1-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1799919, "end_pos": 1761090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073553.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073553.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062545.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062545.1" } ] } }, { "isoform_ac": "A0A5G2QUA7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1/entry#A0A5G2QUA7-1", "sequence": { "sequence": "MPLPDGARSLTGVYRGARGGGHANRTFVFDDGRCSPRQPGAGDGGRGDGALLDTASLKMSDLDSEVLPLPPRYRFRDLLLGDPSFQNDDRVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGCWGCPKHNYTFNESSSEINWAPILWVERKMTLWAIQVVVAIISFLETILLIYLSYKGNIWEQVLRVSFVLEMVNTLPFIITIFWAPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGDNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKFAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHVRMGDSKFFQEYEGKSFTYAAFHAHKKYGVCLIGLKREDNKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQKRRGLAGQGLYEGSARLPVHSIIASVGTVAMDLQNAECRPAQSGGGCAGSKLALPTENGSGSRRPSIAPVLELADTSALLPCDLLSDQSEDEMLPSEDEGLSMVEYVRGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQSGVIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMKITEEDLWIRTYGRLFQKLCSSSAEVPIGIYRTESHVFSSEPHDLRAQSQISVSVEDGEDTRDVKGSWGARVGTGGGSAHGKHAAGGDPAEHPLLRRKSLPWARRLSRKGSRPSGKAAAEWISQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYDEMNDHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASGSQSRKSSCSNKLASCNPETRDETQL", "length": 1239, "header": "tr|A0A5G2QUA7-1|A0A286ZIZ1_PIG Computationally mapped isoform of Potassium sodium-activated channel subfamily T member 1 OS=Sus scrofa OX=9823 GN=KCNT1 PE=4 SV=1 CANONICAL=A0A286ZIZ1-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1822071, "end_pos": 1761090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071535.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071535.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068433.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068433.1" } ] } }, { "isoform_ac": "A0A5G2R9N4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1/entry#A0A5G2R9N4-1", "sequence": { "sequence": "MPLPDGARSLTGVYRGARGGGHANRTFVFDDGRCSPRQPGAGDGGRGDGALLDTASLKMSDLDSEVLPLPPRYRFRDLLLGDPSFQNDDRVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGCWGCPKHNYTFNESSSEINWAPILWVERKMTLWAIQVVVAIISFLETILLIYLSYKGNIWEQVLRVSFVLEMVNTLPFIITIFWAPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGDNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKFAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHVRMGDSKFFQEYEGKSFTYAAFHAHKKYGVCLIGLKREDNKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQKRRGLAGQGLYEGSARLPVHSIIASVGTVAMDLQNAECRPAQSGGGCAGSKLALPTENGSGSRRPSIAPVLELADTSALLPCDLLSDQSEDEMLPSEDEGLSMVEYVRGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQSGVIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMKITEEDLWIRTYGRLFQKLCSSSAEVPIGIYRTESHVFSSEPHDLRAQSQISVSVEDGEDTRDVKGSWGARVGTGGGSAHGKHAAGGDPAEHPLLRRKSLPWARRLSRKGSRPSGKAAAEWISQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEMNDHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASGSQSRKSSCSNKLASCNPETRDETQL", "length": 1260, "header": "tr|A0A5G2R9N4-1|A0A286ZIZ1_PIG Computationally mapped isoform of Potassium sodium-activated channel subfamily T member 1 OS=Sus scrofa OX=9823 GN=KCNT1 PE=4 SV=1 CANONICAL=A0A286ZIZ1-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1822071, "end_pos": 1761090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077457.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077457.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067310.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067310.1" } ] } }, { "isoform_ac": "A0A5G2RA71-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1/entry#A0A5G2RA71-1", "sequence": { "sequence": 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"length": 1229, "header": "tr|A0A5G2RA71-1|A0A286ZIZ1_PIG Computationally mapped isoform of Potassium sodium-activated channel subfamily T member 1 OS=Sus scrofa OX=9823 GN=KCNT1 PE=4 SV=1 CANONICAL=A0A286ZIZ1-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1799919, "end_pos": 1761090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074837.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074837.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067512.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067512.1" } ] } }, { "isoform_ac": "F1RZZ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1/entry#F1RZZ8-1", "sequence": { "sequence": "MARAKLPRSPSESKAGPGGAPAGASAPEEPHGLSPLLPARGGGSVGSDVGQRVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGCWGCPKHNYTFNESSSEINWAPILWVERKMTLWAIQVVVAIISFLETILLIYLSYKGNIWEQVLRVSFVLEMVNTLPFIITIFWAPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGDNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKFAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHVRMGDSKFFQEYEGKSFTYAAFHAHKKYGVCLIGLKREDNKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQKRRGLAGQGLYEGSARLPVHSIIASVGTVAMDLQNAECRPAQSGGGCAGSKLALPTENGSGSRRPSIAPVLELADTSALLPCDLLSDQSEDEMLPSEDEGLSMVEYVRGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQSGVIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMKITEEDLWIRTYGRLFQKLCSSSAEVPIGIYRTESHVFSSEPHDLRAQSQISVSVEDGEDTRDVKGSWGARVGTGGGSAHGKHAAGGDPAEHPLLRRKSLPWARRLSRKGSRPSGKAAAEWISQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEMNDHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASGSQSRKSSCSNKLASCNPETRDETQL", "length": 1222, "header": "tr|F1RZZ8-1|F1RZZ8_PIG Computationally mapped isoform of Potassium sodium-activated channel subfamily T member 1 OS=Sus scrofa OX=9823 GN=KCNT1 PE=4 SV=3 CANONICAL=A0A286ZIZ1-1" }, "locus": { "chromosome": "AEMK02000682.1", "start_pos": 1799919, "end_pos": 1761090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006338.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006338.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006176.3", "url": "https://www.ensembl.org/id/ENSSSCP00000006176.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFL6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFL6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519817", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519817", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIZ1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "potassium channel activity", "id": "GO:0005267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005267", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIZ1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1" } ], "pmid": "" }, { "name": "outward rectifier potassium channel activity", "id": "GO:0015271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015271", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIZ1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1" } ], "pmid": "" }, { "name": "intracellular sodium-activated potassium channel activity", "id": "GO:0005228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005228", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIZ1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIZ1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": 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"categories": [ "Protein" ] }, { "id": "A0A287BH13-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BH13-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A481BTZ2", "url": "https://www.uniprot.org/uniprotkb/A0A481BTZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A481BTZ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A481BTZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LSI2", "url": "https://www.uniprot.org/uniprotkb/I3LSI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LSI2-1", "url": "https://www.uniprot.org/uniprotkb/I3LSI2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELNCSEVPLYGQMTVYAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTADNVLQSSVPGHGLQETVTVSVCLCSEGYSPVTMGSDAVTYVDNLACRLARLLVTQADRLTASSHQTLLTPFALTEGALPALDEELVLALTHLELPVGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQFLLCLPGGIQALALPNEEGATPIDLALRGGHSKLVEDLTNFQGRRSPGFSRVQLSEGASLQYIHSSETLTLTLNHTADHLVEADIKLFRKYFWDRAFLIKALEEQEARSEEKLDMPSSAAESEEEIKNLVSSRSSPGKESVKCVESPVVQLNEGEGQDGLDLDRFSDVLRKSKRPPLLLAAGRPSDMLNGGDEVYANCMVIDQVGDLDVNYVNIEGITPDTSPESMGSTLGSESSKHILPTETSSGMYPPHGNKDVILHPEAQRSFMSPSSSYASNLNLSFGLHGFEKEQSHLKRRSSSLDALDADSEGEGHSAQSHLCHTPVSQSSSRTGLPSGDELDSFETNTEPDFNISRTESLSLSSSLQLKESLLSGVRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPREKRIQEEEWDKCIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKGKDAKDKEKLSRHQFVPGTFSGVLPCWVCDKTLLGKESFQCSNCNANVHKGCKDAAPPCNKKFQEKYNKNKPQTILGNSSLRDGPPPGLSLHPSSSMPIGLPTGRKEMASQVHPLSRSVPGTALESFRRSGTSLESESDGSTWRSRSHSDELFQPMGSSPSTDSLLMEDVVDSSLWSDLSGDAQELEAESWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCIGNDRNFVINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQKDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILSKIENKTYTKLKNGHVFRKQALMSKERTLLYEGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNAWMRRIQQAVESCPEEEGGKTSESDEERRRAEVRVAKIQQCQEILSNQDQQICAYLEEKLHIYAELGELSGFEDVHLEPHLLIKLDPGEPPQAASLLAAALKEAESLQVAVKVSQVSDACQPPEEGCAEPAVTDVLSSRDAAGSPTASLVTEGTGGRGCWDVDPGTQGVGTDQAVSDAGEKVECRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQQESVCSGPSFRGSPLQDQEKYRNLEKRREELASIHKLQHQFLQDQQRWHRRCDQQQREQEAKASRLQAREQECQAQEELLLRNREELDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLCGWKHSRQSSLPAAFSPGRMELMELNRSENFCHENSFFINEALVQMSLNTFNKPTPSDATYPPDISHSDLVRTCGNQVALKTDVSRPSDVNHEPWVAAGPCHQIPPLHQSSKDSCENDLDISQTENSPPHDSNPHGPQLQTFIAEAKLSLQRVTTPDGETGDGEENIVYL", "length": 1699, "header": "tr|A0A286ZQN4-1|A0A286ZQN4_PIG Isoform 1 of Rho guanine nucleotide exchange factor 28 OS=Sus scrofa OX=9823 GN=ARHGEF28 PE=4 SV=3 CANONICAL=A0A286ZQN4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4/entry#A0A286ZQN4-1", "sequence": { "sequence": "MELNCSEVPLYGQMTVYAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTADNVLQSSVPGHGLQETVTVSVCLCSEGYSPVTMGSDAVTYVDNLACRLARLLVTQADRLTASSHQTLLTPFALTEGALPALDEELVLALTHLELPVGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQFLLCLPGGIQALALPNEEGATPIDLALRGGHSKLVEDLTNFQGRRSPGFSRVQLSEGASLQYIHSSETLTLTLNHTADHLVEADIKLFRKYFWDRAFLIKALEEQEARSEEKLDMPSSAAESEEEIKNLVSSRSSPGKESVKCVESPVVQLNEGEGQDGLDLDRFSDVLRKSKRPPLLLAAGRPSDMLNGGDEVYANCMVIDQVGDLDVNYVNIEGITPDTSPESMGSTLGSESSKHILPTETSSGMYPPHGNKDVILHPEAQRSFMSPSSSYASNLNLSFGLHGFEKEQSHLKRRSSSLDALDADSEGEGHSAQSHLCHTPVSQSSSRTGLPSGDELDSFETNTEPDFNISRTESLSLSSSLQLKESLLSGVRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPREKRIQEEEWDKCIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKGKDAKDKEKLSRHQFVPGTFSGVLPCWVCDKTLLGKESFQCSNCNANVHKGCKDAAPPCNKKFQEKYNKNKPQTILGNSSLRDGPPPGLSLHPSSSMPIGLPTGRKEMASQVHPLSRSVPGTALESFRRSGTSLESESDGSTWRSRSHSDELFQPMGSSPSTDSLLMEDVVDSSLWSDLSGDAQELEAESWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCIGNDRNFVINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQKDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILSKIENKTYTKLKNGHVFRKQALMSKERTLLYEGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNAWMRRIQQAVESCPEEEGGKTSESDEERRRAEVRVAKIQQCQEILSNQDQQICAYLEEKLHIYAELGELSGFEDVHLEPHLLIKLDPGEPPQAASLLAAALKEAESLQVAVKVSQVSDACQPPEEGCAEPAVTDVLSSRDAAGSPTASLVTEGTGGRGCWDVDPGTQGVGTDQAVSDAGEKVECRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQQESVCSGPSFRGSPLQDQEKYRNLEKRREELASIHKLQHQFLQDQQRWHRRCDQQQREQEAKASRLQAREQECQAQEELLLRNREELDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLCGWKHSRQSSLPAAFSPGRMELMELNRSENFCHENSFFINEALVQMSLNTFNKPTPSDATYPPDISHSDLVRTCGNQVALKTDVSRPSDVNHEPWVAAGPCHQIPPLHQSSKDSCENDLDISQTENSPPHDSNPHGPQLQTFIAEAKLSLQRVTTPDGETGDGEENIVYL", "length": 1699, "header": "tr|A0A286ZQN4-1|A0A286ZQN4_PIG Isoform 1 of Rho guanine nucleotide exchange factor 28 OS=Sus scrofa OX=9823 GN=ARHGEF28 PE=4 SV=3 CANONICAL=A0A286ZQN4-1" }, "locus": { "chromosome": "2", "start_pos": 83101941, "end_pos": 82830852, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044843.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044843.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033787.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033787.3" } ] } }, { "isoform_ac": "A0A287BH13-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4/entry#A0A287BH13-1", "sequence": { "sequence": "MGSDAVTYVDNLACRLARLLVTQADRLTASSHQTLLTPFALTEGALPALDEELVLALTHLELPVGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQFLLCLPGGIQALALPNEEGATPIDLALRGGHSKLVEDLTNFQGRRSPGFSRVQLSEGASLQYIHSSETLTLTLNHTADHLVEADIKLFRKYFWDRAFLIKALEEQEARSEEKLDMPSSAAESEEEIKNLVSSRSSPGKESVKCVESPVVQLNEGEGQDGLDLDRFSDVLRKSKRPPLLLAAGRPSDMLNGGDEVYANCMVIDQVGDLDVNYVNIEGITPDTSPESMGSTLGSESSKHILPTETSSGMYPPHGNKDVILHPEAQRSFMSPSSSYASNLNLSFGLHGFEKEQSHLKRRSSSLDALDADSEGEGHSAQSHLCHTPVSQSSSRTGLPSGDELDSFETNTEPDFNISRTESLSLSSSLQLKESLLSGVRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPREKRIQEEEWDKCIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKGKDAKDKEKLSRHQFVPGTFSGVLPCWVCDKTLLGKESFQCSNCNANVHKGCKDAAPPCNKKFQEKYNKNKPQTILGNSSLRDGPPPGLSLHPSSSMPIGLPTGRKEMASQVHPLSRSVPGTALESFRRSGTSLESESDGSTWRSRSHSDELFQPMGSSPSTDSLLMEDVVDSSLWSDLSGDAQELEAESWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCIGNDRNFVINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQKDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILSKIENKTYTKLKNGHVFRKQALMSKERTLLYEGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNAWMRRIQQAVESCPEEEGGKTSESDEERRRAEVRVAKIQQCQEILSNQDQQICAYLEEKLHIYAELGELSGFEDVHLEPHLLIKLDPGEPPQAASLLAAALKEAESLQVAVKVSQVSDACQPPEEGCAEPAVTDVLSSRDAAGSPTASLVTEGTGGRGCWDVDPGTQGVGTDQAVSDAGEKVECRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQQESVCSGPSFRGSPLQDQEKYRNLEKRREELASIHKLQHQFLQDQQRWHRRCDQQQREQEAKASRLQAREQECQAQEELLLRNREELDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLCGWKHSRQSSLPAAFSPGRMELMELNRSENFCHENSFFINEALVQMSLNTFNKPTPSDATYPPDISHSDLVRTCGNQVALKTDVSRPSDVNHEPWVAAGPCHQIPPLHQSSKDSCENDLDISQTENSPPHDSNPHGPQLQTFIAEAKLSLQRVTTPDGETGDGEENIVYL", "length": 1616, "header": "tr|A0A287BH13-1|A0A287BH13_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 28 OS=Sus scrofa OX=9823 GN=ARHGEF28 PE=4 SV=3 CANONICAL=A0A286ZQN4-1" }, "locus": { "chromosome": "2", "start_pos": 83101941, "end_pos": 82901301, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054853.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054853.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055423.3", "url": "https://www.ensembl.org/id/ENSSSCP00000055423.3" } ] } }, { "isoform_ac": "A0A481BTZ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4/entry#A0A481BTZ2-1", "sequence": { "sequence": "MELNCSEVPLYGQMTVYAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTADNVLQSSVPGHGLQETVTVSVCLCSEGYSPVTMGSDAVTYVDNLACRLARLLVTQADRLTASSHQTLLTPFALTEGALPALDEELVLALTHLELPVGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQFLLCLPGGIQALALPNEEGATPIDLALRGGHSKLVEDLTNFQGRRSPGFSRVQLSEGASLQYIHSSETLTLTLNHTADHLVEADIKLFRKYFWDRAFLIKALEEQEARSEEKLDMPSSAAESEEEIKNLVSSRSSPGKESVKCVESPVVQLNEGEGQDGLDLDRFSDVLRKSKRPPLLLAAGRPSDMLNGGDEVYANCMVIDQVGDLDVNYVNIEGITPDTSPESMGSTLGSESSKHILPTETSSGMYPPHGNKDVILHPEAQRSFMSPSSSYASNLNLSFGLHGFEKEQSHLKRRSSSLDALDADSEGEGHSAQSHLCHTPVSQSSSRTGLPSGDELDSFETNTEPDFNISRTESLSLSSSLQLKESLLSGVRSRSYSCSSPKISLGKTRLIRDFTVCNSVEGGVLHPGRCSVLPSLSLSLSKSVSLLHPCKQRAYSLPEPPREKRIQEEEWDKCIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKGKDAKDKEKLSRHQFVPGTFSGVLPCWVCDKTLLGKESFQCSNCNANVHKGCKDAAPPCNKKFQEKYNKNKPQTILGNSSLRDGPPPGLSLHPSSSMPIGLPTGRKEMASQVHPLSRSVPGTALESFRRSGTSLESESDGSTWRSRSHSDELFQPMGSSPSTDSLLMEDVVDSSLWSDLSGDAQELEAESWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCIGNDRNFVINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQKDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILSKIENKTYTKLKNGHVFRKQALMSKERTLLYEGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNAWMRRIQQAVESCPEEEGGKTSESDEERRRAEVRVAKIQQCQEILSNQDQQICAYLEEKLHIYAELGELSGFEDVHLEPHLLIKLDPGEPPQAASLLAAALKEAESLQVAVKVSQVSDACQPPEEGCAEPAVTDVLSSRDAAGSPTASLVTEGTGGRGCWDVDPGTQGVGTDQAVSDAGEKVECRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQQESVCSGPSFRGSPLQDQEKYRNLEKRREELASIHKLQHQFLQDQQRWHRRCDQQQREQEAKASRLQAREQECQAQEELLLRNREELDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLCGWKHSRQSSLPAAFSPGRMELMELNRSENFCHENSFFINEALVQMSLNTFNKPTPSDATYPPDISHSDLVRTCGNQVALKTDVSRPSDVNHEPWVAAGPCHQIPPLHQSSKDSCENDLDISQTENSPPHDSNPHGPQLQTFIAEAKLSLQRVTTPDGETGDGEENIVYL", "length": 1728, "header": "tr|A0A481BTZ2-1|A0A481BTZ2_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 28 OS=Sus scrofa OX=9823 GN=ARHGEF28 PE=4 SV=1 CANONICAL=A0A286ZQN4-1" }, "locus": { "chromosome": "2", "start_pos": 83101941, "end_pos": 82830852, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078413.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078413.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069820.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069820.2" } ] } }, { "isoform_ac": "I3LSI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4/entry#I3LSI2-1", "sequence": { "sequence": "MDSDSDSPFNYSWPSFPKMKIRRRASKQDRFSDVLRKSKRPPLLLAAGRPSDMLNGGDEVYANCMVIDQVGDLDVNYVNIEGITPDTSPESMGSTLGSESSKHILPTETSSGMYPPHGNKDVILHPEAQRSFMSPSSSYASNLNLSFGLHGFEKEQSHLKRRSSSLDALDADSEGEGHSAQSHLCHTPVSQSSSRTGLPSGDELDSFETNTEPDFNISRTESLSLSSSLQLKESLLSGVRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPREKRIQEEEWDKCIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKGKDAKDKEKLSRHQFVPGTFSGVLPCWVCDKTLLGKESFQCSNCNANVHKGCKDAAPPCNKKFQEKYNKNKPQTILGNSSLRDGPPPGLSLHPSSSMPIGLPTGRKEMASQVHPLSRSVPGTALESFRRSGTSLESESDGSTWRSRSHSDELFQPMGSSPSTDSLLMEDVVDSSLWSDLSGDAQELEAESWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCIGNDRNFVINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQKDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILSKIENKTYTKLKNGHVFRKQALMSKERTLLYEGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNAWMRRIQQAVESCPEEEGGKTSESDEERRRAEVRVAKIQQCQEILSNQDQQICAYLEEKLHIYAELGELSGFEDVHLEPHLLIKLDPGEPPQAASLLAAALKEAESLQVAVKVSQVSDACQPPEEGCAEPAVTDVLSSRDAAGSPTASLVTEGTGGRGCWDVDPGTQGVGTDQAVSDAGEKVECRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQQESVCSGPSFRGSPLQDQEKYRNLEKRREELASIHKLQHQFLQDQQRWHRRCDQQQREQEAKASRLQAREQECQAQEELLLRNREELDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLCGWKHSRQSSLPAAFSPGRMELMELNRSENFCHENSFFINEALVQMSLNTFNKPTPSDATYPPDISHSDLVRTCGNQVALKTDVSRPSDVNHEPWVAAGPCHQIPPLHQSSKDSCENDLDISQTENSPPHDSNPHGPQLQTFIAEAKLSLQRVTTPDGETGDGEENIVYL", "length": 1385, "header": "tr|I3LSI2-1|A0A286ZQN4_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 28 OS=Sus scrofa OX=9823 GN=ARHGEF28 PE=4 SV=2 CANONICAL=A0A286ZQN4-1" }, "locus": { "chromosome": "2", "start_pos": 83101941, "end_pos": 82961649, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022464.2", "url": "https://www.ensembl.org/id/ENSSSCT00000022464.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027075.2", "url": "https://www.ensembl.org/id/ENSSSCP00000027075.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LSI2", "url": "https://www.uniprot.org/uniprotkb/I3LSI2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515652", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515652", "resource": "KEGG Pathway" }, { "id": "R-SSC-3928662", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928662", "resource": "Reactome", "description": "EPHB-mediated forward signaling" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013026", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013026", "resource": "Reactome", "description": "RHOB GTPase cycle" }, { "id": "R-SSC-9013106", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013106", "resource": "Reactome", "description": "RHOC GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YEI5-1", "protein_name": "Rho guanine nucleotide exchange factor 28", "gene_name": "ARHGEF28", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MELSCTEVPLYGQVTISAKFDKGIYLPEDAEFYFVYDGSMKRHIMFAERIGDNALQSLVPGHGCQEAVSVSVLMYSRGSSPVALGSCPVTYRENLSCKLSRFLISHTECISTTSHKVLLDKFGLTVKDLQSLDTDLTMAIAHEELPSTWSILGSCYEGEPTHKETLLHLAMKLGLVKLSEFLVGQPGGTLALALPNEDGATPLDLAEQNGHSKLVEVFSNFQGSRSPDVARVEISKGACMSFVRSSAALTLTLDHTAKHLLESDVRLFRKYFWNRPLLHECINSNQLEPVEDPVMRCSTTNSVEGPVSLAPDDLSQDGEKPFHGAVVPSKEVEDNVLLDIAQRHSTLDILKKLKTPPTFFAAARLSTMLNGSDEVYANCMLVDQAEDLKMNYIHGDSISSETCLNPSSSAPVVKSSSSPSLEENDQYRCDPNEGNQSVKNEGNTGLRPTVSPSDLYEADSYLPFKTNEFIKEQGQLHAVMKKKSSSLDDLEVNSRSEGVLGRSNIPYPLLEHPEVKACSRDGLDSSEMNISRTESLPLSISPQTKECSPSGIRSRSYSCSSPKDSLGRPRILQDFTVGDSGEDGVPMNSGRSLLQALSLSKSVSLLHPCKRAYSLPEHSREKRIQEEEWDKYIVPSKTESEKYKVSRTFSFLMNRMTSTRNKYKTKNKDTKDKEKLNRHNFINGTFSGIMPCMACEKALLGKESLQCSYCNVIVHKNCKECVPVCTKKSQERYHSKNKPQVGIGNLSFGDISQPGISSVHPSSSVPIVSAGRREALQQSHSLSKSVPGASFERRSMPFPEQDSDASTWRTKSRSEEMLQALGTYSSMDSFVMEVEVDSSQWTDISSDAHEFEAESWSLVVDPMFCNKQEKDVAKRQDVIFELMQTEVHHIHTLFIMSEIFRKGMKEELQLDHSTVDRIFPCLDELLEIHRQFFCRMRERRQESCEEGNERNFVISRIGDILVQQFSEENATKMKKIYGEFCSHQKEAVNLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKEGTEEHKDLCKALRLIKDMIAAVDLKVNEYEKRQKLMEILNRTENKTYTKLKSGHIFRKQDLMRKERILLHEGLVYWKTATGRFKDTLALLLTDMLLFLQEKDQKYVFAAVDQKPSVISLQKLIVREVANEERGMFLISASSAGPEMYEVHTNSREERNSWMRHIQDAVESCPEEQEEGKIGEFDEDRRIAEAKACKIQKCQESLSNQDQQICSCLEDKLHIYAELVDMSGFEDVHVEPHLLIKPDYGETPQASSLLVAALREVESLHVALTSSQVNETDRSSEESTEELTLKHRLSASEILESFPGDAETKEVEESPEVDLSACSIEKEISDASVEYKGESTSFPGSTGTEIVQAIQNLTRLLYSIQAALAIQDSHRELHRLLLQENEKTSRGHSSRIPLFLEPEKYRNSEKQREELANISKLQQQFQQEQQRWLRECEQRQQELEVRAGLLEQREQACSCQEELLEKSRQGLALQSQEFQQSLERLREGQKLLEKKRDSIKMQKKLLWHWKHGLQSSLLLPTGSHEIMGHDQLDSLHGENAFYLNEAVVRVSLSGLNRSDSSLVYEDGVYGLGISDLDMARTCENQVNLRVDTPYQPALTNELWKSTGPYQQMSFSCKSNKDAFNNDLNASQTQGPQAGSPNHGSIQPPQVEPLMLNHQPESLQDAEGGDGREENIVYL", "length": 1725 }, "evidence": [ { "id": "A0A286ZQN4", "url": "https://omabrowser.org/oma/group/A0A286ZQN4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P0C6P5-1", "protein_name": "Rho guanine nucleotide exchange factor 28", "gene_name": "Arhgef28", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELSCSEVPLYGQRTVYAKFGKNVYLPEDAEFYFIYDGSHQRHVVIADRVEDNVLQSIIPGHWLQETVMVSVCLCSEGYSPVTMGSGSVTYVDNMACRLARLLVTQADRLTPCSHQTLLTPFALTAEALPALDEELVLALTQLELPLGWTVLGNSSLEVCLHRESLLHLAVRWALPKLFHFLLCLPGGVKALELPNEEATTPLDLALHGGHSMLVEDISNFQGRRSPGFSRLRLNEDATLQFDRSSETLTLTVNHTAEHLLEADIKLFRKYFWDRAFLVKALDQEAKTERATMPSGAAETEEEVRNLESGRSPSEEEEDGQLVKSQADGPSEQEDQDRLVLDHSFDGLKKSKHAPASLAAGQLSDVPNGGDEVYANCMVIDQVGDLDINYINIEGLSTHTSPESMRSTLGPQACKHILPPDTSPCGHLLCEDSDRTLDAAASQSCMSPPSSHTSNLNLSFGLHGFVKEQSHLKKRSSSLDALVADSEEEGRSEPPICYAVGSQSSPRTGLPGGDELDSFDANTEPDCNISRTESLSLSSTLHSKESLLSGIRSRSYSCSSPKISSGKSRLVRDFTVCSSSEEQRSYSFQEPPGEKRIQEEEWDDYIIPAKAESEKHKVSRTFSFLMNRMTSPRNKSKMKNKDTKDKEKLNRHQFVPGTFSGVLQCSGCDKTLLGKESLQCANCKANTHKGCKDTVPPCTKKFQDKYNKNKPQTILGSSSVRDVPPPGLSLHPSPSMPIGLPAGRKETAGQAHPLSRSVPGTTLESFRRAVTSLESEGDSNSWRSRSHSDELFQSMGSSPSTESFMMEDVVDSSLWSELSSDAQEFEAESWSLVVDPSFCSRQEKDVIKRQDVIFELMQTEVHHIQTLLIMSEVFRKGMKEELQLDHSTVDRIFPCLDELLETHKHFFFSMKERRQESCTGNDRNFVINQIGDILVQQFSEENASKMKRIYGDFCSHHKEAMSLFKELQQNKKFQNFIKIRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKERTEEHRDLCRALGLIKDMIAAVDLKVSEYEKNQKWLEILNKIENKTYTKLKNGHVFRKQALMSQERALLHDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTSSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKADARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFEDVHLEPHLLIKPDPGEPPQAASLLAAALREAESLQVAVKASKLADVSQPSEEGPGGAVLADTLSAQDAPASPTAFTEGTEGRGCWDVDPRLQGVVTDLAVSDAGEKVEYRSFSGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQQESLAPSHSFRGGPLQDQEKSRYLEKHREELANIHKLQYQFQQEQRRWHRTCDQQQREQEAQESWLQARERECQSQEELLLRHRSELDHQLQEYQQNLERLREGQRMVERERQRMRDQQGLLGHCKHSRQRSLPAVFSPGSKEVTELNRAESLCHEKSFFLNDAFTHMSLNTSNKPNPSGAPWDAHPPGGSHLDLARTSDSQIEVKMDVSQPSDVNSELWTTGLGPQRPARQESIKDSCKNVADLNSFQTESPDPQDSNQRGPQPQTLITEAKLTPPMAAGHGGDAGDGAEENIVYL", "length": 1700 }, "evidence": [ { "id": "A0A286ZQN4", "url": "https://omabrowser.org/oma/group/A0A286ZQN4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P97433-1", "protein_name": "Rho guanine nucleotide exchange factor 28", "gene_name": "Arhgef28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MELSCSEVPLYGQKTVYAKFGKNVYLPEDAEFYFVYGGSHQRHVVIADRVQDNVLQSSIPGHWLQETVTVSVCLCSEGYSPVTMGSGSVTYVDNMACRLARLLVTQADRLTACSHQTLLTPFALTVEALPALDEELVLALTQLELPLGWTVLGNSSLEVSLHRESLLHLAVRWALPKLFHFLLCLPGGVKALKLPNEEATTPLDLALQGGHSTLVEDITNFQGSHSPGFSRLRLNEEATLQFVHSSETLTLTVNHTAEHLLEADIKLFRKYFWDRAFLVKALEQEAKTEKATMPSGAAETEEEVRNLESGRSPSEEEEDAKSIKSQVDGPSEHEDQDRLPLDRSFDGLKKSKHVPASLAAGQLSDVLNGGDEVYANCMVIDQVGDLDINYINLEGLSTHTSPESGRSMLGPQACMHTLPPDTSPCGRPLIENSEGTLDAAASQSFVTPSSSRTSNLNLSFGLHGFEKEQSHLKKRSSSLDALVADSEGEGGSEPPICYAVGSQSSPRTGLPSGDELDSFETNTEPDCNISRTESLSLSSTLHSKESLLSGIRSRSYSCSSPKISSGKSRLVRDFTVCSTSEEQRSYSFQEPPGEKRIQEEEWDEYVIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKMKNKDTKEKEKMNRHQFVPGTFSGVLQCSGCDKTLLGKESLQCANCKANTHKGCKDAVPPCTKKFQEKYNKNKPQSILGSSSVRDVPAPGLSLHPSSSMPIGLPAGRKEFAAQVHPLSRSVPGTTLESFRRAVTSLESEGDSWRSRSHSDELFQSMGSSPSTESFMMEDVVDSSLWIDLSSDAQEFEAESWSLVVDPSFCSRQEKDVIKRQDVIFELMQTEVHHIQTLLIMSEVFRKGMKEELQLDHSTVDKIFPCLDELLETHRHFFFSMKERRQESCAGSDRNFVINQIGDILVQQFSEENASKMKRIYGEFCSHHKEAMSLFKELQQNKKFQNFIKIRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKERTEEHRDLCKALGLIKDMIAAVDLKVSEYEKNQKWLEILNKIENKTYTKLKNGHVFRKQALLSQERALLHDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFEDVHLEPHLLIKPDPGEPPQAASLLAAALREAESLQVAVKASKMGDVSQSSEESPGGTVLMDTPSTQDVPASPTASLVTEGTEGRGCWDVDPGLQGVVTDLAVSDAGEKVEYRSFSGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQRESLAPSHSFRGGPLQDQEKSRYLEKQREELANIHKLQHQFQQEQRRWHRTCDQQQREQEAQESWLQARERECQSQEELLLRHRSELDHQLQEYQQSLERLREGQRMVERERQKMRVQQGLLGHCKHSRQRSLPAVFSPGSKEVTELNRAESLCHENSFFINEAFGHMSLNTSNKPNPSGVPWDAHPLEGSHFDLARTSESPTELKIDISQPPDVNSELWTTGPGHQRPALQENSKESYKNVADLDSFQSESSSPQDSNQRGPQPQTLTTEAKLSLPMAAGHGGDAGDGAEENILYL", "length": 1700 }, "evidence": [ { "id": "A0A286ZQN4", "url": "https://omabrowser.org/oma/group/A0A286ZQN4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N1W1-1", "protein_name": "Rho guanine nucleotide exchange factor 28", "gene_name": "ARHGEF28", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MELSCSEAPLYGQMMIYAKFDKNVYLPEDAEFYFTYDGSHQRHVMIAERIEDNVLQSSVPGHGLQETVTVSVCLCSEGYSPVTMGSGSVTYVDNMACRLARLLVTQANRLTACSHQTLLTPFALTAGALPALDEELVLALTHLELPLEWTVLGSSSLEVSSHRESLLHLAMRWGLAKLSQFFLCLPGGVQALALPNEEGATPLDLALREGHSKLVEDVTNFQGRWSPSFSRVQLSEEASLHYIHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLVKAFEPEARPEERTAMPSSGAETEEEIKNSVSSRSAAEKEDIKRVKSLVVQHNEHEDQHSLDLDRSFDILKKSKPPSTLLAAGRLSDMLNGGDEVYANCMVIDQVGDLDISYINIEGITATTSPESRGCTLWPQSSKHTLPTETSPSVYPLSENVEGTAHTEAQQSFMSPSSSCASNLNLSFGWHGFEKEQSHLKKRSSSLDALDADSEGEGHSEPSHICYTPGSQSSSRTGIPSGDELDSFETNTEPDFNISRAESLPLSSNLQSKESLLSGVRSRSYSCSSPKISLGKTRLVRELTVCSSSEEQRAYSLSEPPRENRIQEEEWDKYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKSKDAKDKEKLNRHQFAPGTFSGVLQCLVCDKTLLGKESLQCSNCNANVHKGCKDAAPACTKKFQEKYNKNKPQTILGNSSFRDIPQPGLSLHPSSSVPVGLPTGRRETVGQVHPLSRSVPGTTLESFRRSATSLESESDHNSCRSRSHSDELLQSMGSSPSTESFIMEDVVDSSLWSDLSSDAQEFEAESWSLVVDPSFCNRQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCAGSDRNFVIDRIGDILVQQFSEENASKMKKIYGEFCCHHKEAVNLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKERTEEHKDLRKALCLIKDMIATVDLKVNEYEKNQKWLEILNKIENKTYTKLKNGHVFRKQALMSEERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEKGGRTSESDEDKRKAEARVAKIQQCQEILTNQDQQICAYLEEKLHIYAELGELSGFEDVHLEPHLLIKPDPGEPPQAASLLAAALKEAESLQVAVKASQMGAVSQSCEDSCGDSVLADTLSSHDVPGSPTASLVTGGREGRGCSDVDPGIQGVVTDLAVSDAGEKVECRNFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHRLVLQQQEGLSLGHSILRGGPLQDQKSRDADRQHEELANVHQLQHQLQQEQRRWLRRCEQQQRAQATRESWLQERERECQSQEELLLRSRGELDLQLQEYQHSLERLREGQRLVEREQARMRAQQSLLGHWKHGRQRSLPAVLLPGGPEVMELNRSESLCHENSFFINEALVQMSFNTFNKLNPSVIHQDATYPTTQSHSDLVRTSEHQVDLKVDPSQPSNVSHKLWTAAGSGHQILPFHESSKDSCKNDLDTSHTESPTPHDSNSHRPQLQAFITEAKLNLPTRTMTRQDGETGDGAKENIVYL", "length": 1705 }, "evidence": [ { "id": "A0A286ZQN4", "url": "https://omabrowser.org/oma/group/A0A286ZQN4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" }, { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" }, { "name": "cellular response to tumor necrosis factor", "id": "GO:0071356", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071356", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" }, { "name": "small GTPase-mediated signal transduction", "id": "GO:0007264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007264", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" }, { "name": "regulation of Rho protein signal transduction", "id": "GO:0035023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035023", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQN4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1064, "end_pos": 1066, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1379, "end_pos": 1381, "annotation": "n_glycosylation_sequon" }, { "start_pos": 154, "end_pos": 156, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1555, "end_pos": 1557, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 37, "end_pos": 39, "annotation": "n_glycosylation_sequon" }, { "start_pos": 458, "end_pos": 460, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4, "end_pos": 6, "annotation": "n_glycosylation_sequon" }, { "start_pos": 530, "end_pos": 532, "annotation": "n_glycosylation_sequon" }, { "start_pos": 636, "end_pos": 638, "annotation": "n_glycosylation_sequon" }, { "start_pos": 719, "end_pos": 721, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZQN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" }, { "id": "PS50010", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50010" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DH", "eco_id": "ECO_0000259", "start_pos": 850, "end_pos": 1045, "start_aa": "Lys", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZQN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 1087, "end_pos": 1189, "start_aa": "Thr", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZQN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN4" }, { "id": "PS50081", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50081" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phorbol-ester/DAG-type", "eco_id": "ECO_0000259", "start_pos": 653, "end_pos": 700, "start_aa": "Arg", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1064, "end_pos": 1066 }, { "start_pos": 1379, "end_pos": 1381 }, { "start_pos": 154, "end_pos": 156 }, { "start_pos": 1555, "end_pos": 1557 }, { "start_pos": 254, "end_pos": 256 }, { "start_pos": 37, "end_pos": 39 }, { "start_pos": 458, "end_pos": 460 }, { "start_pos": 4, "end_pos": 6 }, { "start_pos": 530, "end_pos": 532 }, { "start_pos": 636, "end_pos": 638 }, { "start_pos": 719, "end_pos": 721 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"uniprot_id": "A0A286ZIN9_PIG", "mass": { "chemical_mass": 47728.0, "monoisotopic_mass": 47728.0 }, "refseq": { "ac": "XP_020937668", "name": "perilipin-3 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937668" }, "gene_names": [ { "name": "PLIN3", "type": "recommended", "evidence": [ { "id": "A0A286ZIN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ] }, { "name": "M6PRBP1", "type": "synonym", "evidence": [ { "id": "XP_020937668", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937668" } ] }, { "name": "PLIN3", "type": "synonym", "evidence": [ { "id": "XP_020937668", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937668" } ] } ], "protein_names": [ { "name": "Perilipin", "type": "recommended", "evidence": [ { "id": "A0A286ZIN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9/entry#names_and_taxonomy" } ] }, { "name": "perilipin-3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020937668", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937668" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLIN3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9", "locus": { "chromosome": "2", "start_pos": 73995529, "end_pos": 73969862, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038954", "url": "https://www.ensembl.org/id/ENSSSCG00000038954" } ] } } ], "crossref": [ { "id": "A0A286ZIN9", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZIN9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038954", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038954", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "595103", "url": "https://www.ncbi.nlm.nih.gov/gene/595103", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004279", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004279", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "VMFRGIT", "url": "https://omabrowser.org/oma/group/VMFRGIT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14024", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14024", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14024:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14024:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03036", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03036", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-163560", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-163560", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020937668", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020937668", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZR05", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR05", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZR05-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR05-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8B0", "url": "https://www.uniprot.org/uniprotkb/A0A287B8B0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B8B0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B8B0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BN49", "url": "https://www.uniprot.org/uniprotkb/A0A287BN49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BN49-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BN49-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8K4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8K4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8K4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8K4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSASETEASASSTQVTTEEPVQQPSVVDRVAGMPLISSTCHMVSAAYTSTKESHPHVKTVCDVAEKGVKTLTAAAVSGAQPILSKLEPQLTSASEYAHRGLDKLEENLPILQQPSEKVLADTKELVSSKVSEAREAVSNTVSSAKDTVASRVTEAVDVTRGAVQSGVDLTKSMVTSSVHSVMGSRVGQMVLSGVDTVLGKSEEWVDNHLPMTDAELAHLATSLEGFDMASVAQQRQDQSYFVRLGSLSERLRQRAYEHSLGKLQHTRQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQMWLSWNQKRLQGGEEDPAKPEVESQTFTMFRDVTQQLQTTCASLGASLQGLPAHVKEQALQARRQVEDLQATFSGMHSFQDLSSNVLMQSREQVARAREALDHVVDYVAQNTPVMWLVGPFAPGVVEKAPEEKK", "length": 438, "header": "tr|A0A286ZIN9-1|A0A286ZIN9_PIG Isoform 1 of Perilipin OS=Sus scrofa OX=9823 GN=PLIN3 PE=1 SV=1 CANONICAL=A0A286ZIN9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9/entry#A0A286ZIN9-1", "sequence": { "sequence": "MSASETEASASSTQVTTEEPVQQPSVVDRVAGMPLISSTCHMVSAAYTSTKESHPHVKTVCDVAEKGVKTLTAAAVSGAQPILSKLEPQLTSASEYAHRGLDKLEENLPILQQPSEKVLADTKELVSSKVSEAREAVSNTVSSAKDTVASRVTEAVDVTRGAVQSGVDLTKSMVTSSVHSVMGSRVGQMVLSGVDTVLGKSEEWVDNHLPMTDAELAHLATSLEGFDMASVAQQRQDQSYFVRLGSLSERLRQRAYEHSLGKLQHTRQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQMWLSWNQKRLQGGEEDPAKPEVESQTFTMFRDVTQQLQTTCASLGASLQGLPAHVKEQALQARRQVEDLQATFSGMHSFQDLSSNVLMQSREQVARAREALDHVVDYVAQNTPVMWLVGPFAPGVVEKAPEEKK", "length": 438, "header": "tr|A0A286ZIN9-1|A0A286ZIN9_PIG Isoform 1 of Perilipin OS=Sus scrofa OX=9823 GN=PLIN3 PE=1 SV=1 CANONICAL=A0A286ZIN9-1" }, "locus": { "chromosome": "2", "start_pos": 73994818, "end_pos": 73973317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054772.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054772.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031421.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031421.2" } ] } }, { "isoform_ac": "A0A286ZR05-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9/entry#A0A286ZR05-1", "sequence": { "sequence": "MGKRTFELPRRVEAQGKDLLLRNVCQRDRSQCQQHPGDHGRTGTAAQRGGPRGRNATHQLHMPHGVCCLHVHQGEPPPRQDRLRRGREGREDPHGGCCQRGPAHPVQVGTPAGLDKLEENLPILQQPSEKVLADTKELVSSKVSEAREAVSNTVSSAKDTVASRVTEAVDVTRGAVQSGVDLTKSMVTSSVHSVMGSRVGQMVLSGVDTVLGKSEEWVDNHLPMTDAELAHLATSLEGFDMASVAQQRQDQSYFVRLGSLSERLRQRAYEHSLGKLQHTRQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQMWLSWNQKRLQGGEEDPAKPEQVESQTFTMFRDVTQQLQTTCASLGASLQGLPAHVKEQALQARRQVEDLQATFSGMHSFQDLSSNVLMQSREQVARAREALDHVVDYVAQNTPVMWLVGPFAPGVVEKAPEEKK", "length": 452, "header": "tr|A0A286ZR05-1|A0A286ZIN9_PIG Computationally mapped isoform of Perilipin OS=Sus scrofa OX=9823 GN=PLIN3 PE=1 SV=1 CANONICAL=A0A286ZIN9-1" }, "locus": { "chromosome": "2", "start_pos": 73994818, "end_pos": 73971145, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048848.2", "url": "https://www.ensembl.org/id/ENSSSCT00000048848.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034059.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034059.2" } ] } }, { "isoform_ac": "A0A287B8B0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9/entry#A0A287B8B0-1", "sequence": { "sequence": "MSASETEASASSTQVTTEEPVQQPSVVDRVAGMPLISSTCHMVSAAYTSTKESHPHVKTVCDVAEKGVKTLTAAAVSGAQPILSKLEPQLTSASEYAHRGLDKLEENLPILQQPSEKVLADTKELVSSKVSEAREAVSNTVSSAKDTVASRVTEAVDVTRGAVQSGVDLTKSMVTSSVHSVMGSRVGQMVLSGVDTVLGKSEEWVDNHLPMTDAELAHLATSLEGFDMASVAQQRQDQSYFVRLGSLSERLRQRAYEHSLGKLQHTRQRAQEALLQLSQALSLVESQTFTMFRDVTQQLQTTCASLGASLQGLPAHVKEQALQARRQVEDLQATFSGMHSFQDLSSNVLMQSREQVARAREALDHVVDYVAQNTPVMWLVGPFAPGVVEKAPEEKK", "length": 396, "header": "tr|A0A287B8B0-1|A0A287B8B0_PIG Computationally mapped isoform of Perilipin OS=Sus scrofa OX=9823 GN=PLIN3 PE=1 SV=2 CANONICAL=A0A286ZIN9-1" }, "locus": { "chromosome": "2", "start_pos": 73994818, "end_pos": 73973317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049617.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049617.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052543.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052543.2" } ] } }, { "isoform_ac": "A0A287BN49-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9/entry#A0A287BN49-1", "sequence": { "sequence": "MPLISSTCHMVSAAYTSTKESHPHVKTVCDVAEKGVKTLTAAAVSGAQPILSKLEPQLTSASEYAHRGLDKLEENLPILQQPSEKVLADTKELVSSKVSEAREAVSNTVSSAKDTVASRVTEAVDVTRGAVQSGVDLTKSMVTSSVHSVMGSRVGQMVLSGVDTVLGKSEEWVDNHLPMTDAELAHLATSLEGFDMASVAQQRQDQSYFVRLGSLSERLRQRAYEHSLGKLQHTRQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQMWLSWNQKRLQGGEEDPAKPEQVESQTFTMFRDVTQQLQTTCASLGASLQGLPAHVKEQALQARRQVEDLQATFSGMHSFQDLSSNVLMQSREQVARAREALDHVVDYVAQNTPVMWLVGPFAPGVVEKAPEEKK", "length": 407, "header": "tr|A0A287BN49-1|A0A287BN49_PIG Computationally mapped isoform of Perilipin OS=Sus scrofa OX=9823 GN=PLIN3 PE=1 SV=1 CANONICAL=A0A286ZIN9-1" }, "locus": { "chromosome": "2", "start_pos": 73994818, "end_pos": 73978241, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060388.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060388.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057506.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057506.1" } ] } }, { "isoform_ac": "A0A8W4F8K4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9/entry#A0A8W4F8K4-1", "sequence": { "sequence": "MHSSTWELVRNADFDLLLRNVCQRDRSQCQQHPGDHGRTGTAAQRGGPRGRNATHQLHMPHGVCCLHVHQGEPPPRQDRLRRGREGREDPHGGCCQRGPAHPVQVGTPAGLDKLEENLPILQQPSEKVLADTKELVSSKVSEAREAVSNTVSSAKDTVASRVTEAVDVTRGAVQSGVDLTKSMVTSSVHSVMGSRVGQMVLSGVDTVLGKSEEWVDNHLPMTDAELAHLATSLEGFDMASVAQQRQDQSYFVRLGSLSERLRQRAYEHSLGKLQHTRQRAQEALLQLSQALSLMETVKQGVDQKLVEGQEKLHQMWLSWNQKRLQGGEEDPAKPEQVESQTFTMFRDVTQQLQTTCASLGASLQGLPAHVKEQALQARRQVEDLQATFSGMHSFQDLSSNVLMQSREQVARAREALDHVVDYVAQNTPVMWLVGPFAPGVVEKAPEEKK", "length": 449, "header": "tr|A0A8W4F8K4-1|A0A286ZIN9_PIG Computationally mapped isoform of Perilipin OS=Sus scrofa OX=9823 GN=PLIN3 PE=1 SV=2 CANONICAL=A0A286ZIN9-1" }, "locus": { "chromosome": "2", "start_pos": 73994818, "end_pos": 73973071, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102615.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102615.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074655.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074655.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR05", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR05" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-163560", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-163560", "resource": "Reactome", "description": "Triglyceride catabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1ADC3-1", "protein_name": "Perilipin", "gene_name": "PLIN4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAASEDGAAQPKAEEQQQSIGTRVANLPLVSSACGIVSSAYNSTKGSHPYVRSVCDAAEKGVRTLTAAAVSGAQPILTKLEPQISTANEYACKGLDKLEEKLPILQQPTEKLISDTKQLVTSTVTGARDVLTSTVAGAKDAVSSRVTGVMDMTKGAVQGSVELTKSAVSSGVTTVMGSTVGQMVASGVGSMLEKSEELVDHYLPMTDEELAKLATAVEGFEPEQQKKQQSYFVRLGSLSAKLQHRALQHSLGKLQSARSSSHDVLGQLQRALDLVEHLKQGVDQKLQGGQEKLQQLWLEWSTKQPGGGKELVPPATVESGVLALLQGLAQQLHSTCQPLVCSLQGLPASIQDTAAQVRHNVEELRASLTSATSLQELTGSAVARARVHATKARELMDELVEHVAHNTPLSWLVGPFAPSVQQGQSVQGE", "length": 429 }, "evidence": [ { "id": "A0A286ZIN9", "url": "https://omabrowser.org/oma/group/A0A286ZIN9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1QGJ3-1", "protein_name": "Perilipin", "gene_name": "plin3", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADNVKTAEKDKEDSQEQQSVISRVGNLPLVSSACGAVYNAYSSTKDSVPLLKGVMEVAESGVRTLGAAASTGSKPILDRLEPQIAAVNEYAIKGLEKVEGNLPILQQPADKLVSDTVGMVYQSVTGAKDAVVGAVMEGVEKTRMAVTGGINTVMGSRVGQMVSNGVDKALTHSEDWVEQNLPISEKELATLAEPRPGEEEGFIVSTRSSYFVRLGKLSAKVRERALEQSLLRARKARDTTHASVTQMTSTMDLLESARVTLTSANQQLAGAPEQLLQRWKEWKEGQPKELQEKVTAETEADGAKDKEQEMESKALLMVRGLSDQLKTACSGVVSSVQGLPGTVQEQLLNARRTAGELQASLSGTKTLTPVLLLQTRQQIGQVRQSLDGVVEYLLNNTPLNWLVGPFAPQITEKGE", "length": 416 }, "evidence": [ { "id": "A0A286ZIN9", "url": "https://omabrowser.org/oma/group/A0A286ZIN9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3HCI0-1", "protein_name": "Perilipin", "gene_name": "Plin3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSNGTDAPAEAQAAVEEPVPQPSVVDRMASLPLISSTCEMVSAAYTSTKDRYPHVRTVCDVAEKGVKTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDRLQESLPILQQPTEKVLADTKELVSSTVSGAKEIVSSSVTSAKDTVATRVTGAVDVTRGAVQSTMDMTKSAVTSGVQSVLGSRVGQMVIGGVDSMLVKSEAWADNRLPLTDAELALIATSPEGSDLASLQQQRQERNYFVRLGSLSERLRNHAYEHSLGKLRSARQNAHEALQQLTHALSLMESVKQGMDQRLGEGQEKLHHMWLSWNQKKPQDAEKDAAKPEQVEARALSMLRDITQQLQSTCVALGASIQGLPGHIREQAQQARSQVEDLQATFSGIHSFQDLTAGVLAQTRERIARAREALDHTVEYVAQNTPVTWLVGPFAPGITEKPLEEEKQG", "length": 440 }, "evidence": [ { "id": "A0A286ZIN9", "url": "https://omabrowser.org/oma/group/A0A286ZIN9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "cellular response to glucose starvation", "id": "GO:0042149", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042149", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "pmid": "" }, { "name": "lipid storage", "id": "GO:0019915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019915", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "pmid": "" }, { "name": "lipid droplet disassembly", "id": "GO:1905691", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905691", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "pmid": "" }, { "name": "positive regulation of triglyceride storage", "id": "GO:0010890", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010890", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZR80-1", "uniprot_ac": "A0A286ZR80", "uniprot_id": "A0A286ZR80_PIG", "mass": { "chemical_mass": 75274.0, "monoisotopic_mass": 75274.0 }, "refseq": {}, "gene_names": [ { "name": "SPARCL1", "type": "recommended", "evidence": [ { "id": "A0A286ZR80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ] } ], "protein_names": [ { "name": "SPARC", "type": "recommended", "evidence": [ { "id": "A0A286ZR80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#names_and_taxonomy" } ] }, { "name": "Basement-membrane protein 40", "type": "synonym", "evidence": [ { "id": "A0A286ZR80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#names_and_taxonomy" } ] }, { "name": "Osteonectin", "type": "synonym", "evidence": [ { "id": "A0A286ZR80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#names_and_taxonomy" } ] }, { "name": "Secreted protein acidic and rich in cysteine", "type": "synonym", "evidence": [ { "id": "A0A286ZR80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Appears to regulate cell growth through interactions with the extracellular matrix and cytokines. Binds calcium and copper, several types of collagen, albumin, thrombospondin, PDGF and cell membranes. There are two calcium binding sites; an acidic domain that binds 5 to 8 Ca(2+) with a low affinity and an EF-hand loop that binds a Ca(2+) ion with a high affinity.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRX5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRX5#function" }, { "database": "UniProtKB", "id": "ARBA00025574", "url": "https://www.uniprot.org/uniprotkb/ARBA00025574#function" }, { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80#function" }, { "database": "UniProtKB", "id": "A0A287BRY6", "url": "https://www.uniprot.org/uniprotkb/A0A287BRY6#function" }, { "database": "UniProtKB", "id": "A0A287BEN0", "url": "https://www.uniprot.org/uniprotkb/A0A287BEN0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SPARCL1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80", "locus": { "chromosome": "8", "start_pos": 131431200, "end_pos": 131386973, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009222", "url": "https://www.ensembl.org/id/ENSSSCG00000009222" } ] } } ], "crossref": [ { "id": "A0A286ZR80", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZR80", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009222", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009222", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16231", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16231", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100037275", "url": "https://www.ncbi.nlm.nih.gov/gene/100037275", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001999", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001999", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002350", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002350", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003645", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003645", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015369", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015369", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016359", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016359", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019577", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019577", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100037275", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100037275", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BRY6", "url": "https://www.orthodb.org/?gene=A0A287BRY6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13866", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13866", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13866:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13866:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07648", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07648", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09289", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09289", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10591", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10591", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-381426", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8957275", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZR80-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRX5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRX5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRX5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRX5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BEN0", "url": "https://www.uniprot.org/uniprotkb/A0A287BEN0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BEN0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BEN0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRY6", "url": "https://www.uniprot.org/uniprotkb/A0A287BRY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRY6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BRY6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKTLLFLLYILGTAAAVPTQARFPSGHSNPTAASLSSFQQAETLVTAEQTATPTGRVEDAENEKEPAVSLEEHPHHKAEKSSVLKSKEEDHEESADQDQSYSQNLGSQEQEKSERDLIENSEYMPTEGTLDLKEDMTQPQKEKFPESIDSLGHDDSSIVDSNQQESITKAEENQDSHPQLNRSSKHSPDLSDRGNQEQDPDSPTGKDEGEKEPHEVDTLNDNQEEEREVLQEQSNSEQEEDSTRSDDILEESYQPTQASKMQKDEFEQGNQGREEENANAETEEETASKITKPNQEREWQSPEGKPGLEVISNHEEMDKKTLAKPLLVEPTDDDNVMPRNHGADDDSDDDDEHNASEDAFNPSEAYLERERAPSNYYHTKYKEQREKAHEGENVDTGEAAENQGAKKAEGSPNEDDNSTEGTTRGHSVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHLFATKCRLEGTKKEHQLQLDYFGACKSIPACTDFEVTQFPLRMRDWLKNILMQLYEPNPEHAGYLNEKQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHSELAPLRASLVPMEHCITRFFGECDPNKDKHITLKEWGRCFEIKEESKNLLPTH", "length": 662, "header": "tr|A0A286ZR80-1|A0A286ZR80_PIG Isoform 1 of SPARC OS=Sus scrofa OX=9823 GN=SPARCL1 PE=1 SV=2 CANONICAL=A0A286ZR80-1" }, "isoforms": [ { "isoform_ac": "A0A286ZR80-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#A0A286ZR80-1", "sequence": { "sequence": "MKTLLFLLYILGTAAAVPTQARFPSGHSNPTAASLSSFQQAETLVTAEQTATPTGRVEDAENEKEPAVSLEEHPHHKAEKSSVLKSKEEDHEESADQDQSYSQNLGSQEQEKSERDLIENSEYMPTEGTLDLKEDMTQPQKEKFPESIDSLGHDDSSIVDSNQQESITKAEENQDSHPQLNRSSKHSPDLSDRGNQEQDPDSPTGKDEGEKEPHEVDTLNDNQEEEREVLQEQSNSEQEEDSTRSDDILEESYQPTQASKMQKDEFEQGNQGREEENANAETEEETASKITKPNQEREWQSPEGKPGLEVISNHEEMDKKTLAKPLLVEPTDDDNVMPRNHGADDDSDDDDEHNASEDAFNPSEAYLERERAPSNYYHTKYKEQREKAHEGENVDTGEAAENQGAKKAEGSPNEDDNSTEGTTRGHSVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHLFATKCRLEGTKKEHQLQLDYFGACKSIPACTDFEVTQFPLRMRDWLKNILMQLYEPNPEHAGYLNEKQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHSELAPLRASLVPMEHCITRFFGECDPNKDKHITLKEWGRCFEIKEESKNLLPTH", "length": 662, "header": "tr|A0A286ZR80-1|A0A286ZR80_PIG Isoform 1 of SPARC OS=Sus scrofa OX=9823 GN=SPARCL1 PE=1 SV=2 CANONICAL=A0A286ZR80-1" }, "locus": { "chromosome": "8", "start_pos": 131426454, "end_pos": 131412104, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047296.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047296.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034088.3", "url": "https://www.ensembl.org/id/ENSSSCP00000034088.3" } ] } }, { "isoform_ac": "A0A286ZRX5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#A0A286ZRX5-1", "sequence": { "sequence": "HSHGDTTRARKMKTLLFLLYILGTAAAVPTQARFPSGHSNPTAASLSSFQQAETLVTAEQTATPTGRVEDAENEKEPAVSLEEHPHHKAEKSSVLKSKEEDHEESADQDQSYSQNLGSQEQEKSERDLIENSEYMPTEGTLDLKEDMTQPQKEKFPESIDSLGHDDSSIVDSNQQESITKAEENQDSHPQLNRSSKHSPDLSDRGNQEQDPDSPTGKDEGEKEPHEVDTLNDNQEEEREVLQEQSNSEQEEDSTRSDDILEESYQPTQASKMQKDEFEQGNQGREEENANAETEEETASKITKPNQEREWQSPEGKPGLEVISNHEEMDKKTLAKPLLVEPTDDDNVMPRNHGADDDSDDDDEHNASEDAFNPSEAYLERERAPSNYYHTKYKEQREKAHEGENVDTGEAAENQGAKKAEGSPNEDDNSTEGTTRGHSVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHLFATKCRLEGTKKEHQLQLDYFGACKSIPACTDFEVTQFPLRMRDWLKNILMQLYEPNPEHAGYLNEKQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHSELAPLRASLVPMEHCITRFFGECDPNKDKHITLKEWGRCFEIKEESKNLLPTH", "length": 673, "header": "tr|A0A286ZRX5-1|A0A286ZR80_PIG Computationally mapped isoform of SPARC OS=Sus scrofa OX=9823 GN=SPARCL1 PE=1 SV=2 CANONICAL=A0A286ZR80-1" }, "locus": { "chromosome": "8", "start_pos": 131426454, "end_pos": 131411610, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063769.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063769.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034214.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034214.2" } ] } }, { "isoform_ac": "A0A287BEN0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#A0A287BEN0-1", "sequence": { "sequence": "FLFFLFLAFLLFLGFSFFQTQARFPSGHSNPTAASLSSFQQAETLVTAEQTATPTGRVEDAENEKEPAVSLEEHPHHKVRVTQAEKSSVLKSKEEDHEESADQDQSYSQNLGSQEQEKSERDLIENSEYMPTEGTLDLKEDMTQPQKEKFPESIDSLGHDDSSIVDSNQQESITKAEENQDSHPQLNRSSKHSPDLSDRGNQEQDPDSPTGKDEGEKEPHEVDTLNDNQEEEREVLQEQSNSEQEEDSTRSDDILEESYQPTQASKMQKDEFEQGNQGREEENANAETEEETASKITKPNQEREWQSPEGKPGLEVISNHEEMDKKTLAKPLLVEPTDDDNVMPRNHGADDDSDDDDEHNASEDAFNPSEAYLERERAPSNYYHTKYKEQREKAHEGENVDTGEAAENQGAKKAEGSPNEDDNSTEGTTRGHSVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHLFATKCRLEGTKKEHQLQLDYFGACKSIPACTDFEVTQFPLRMRDWLKNILMQLYEPNPEHAGYLNEKQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHSELAPLRASLVPMEHCITRFFGECDPNKDKHITLKEWGRCFEIKEESKNLLPTH", "length": 668, "header": "tr|A0A287BEN0-1|A0A287BEN0_PIG Computationally mapped isoform of SPARC OS=Sus scrofa OX=9823 GN=SPARCL1 PE=1 SV=2 CANONICAL=A0A286ZR80-1" }, "locus": { "chromosome": "8", "start_pos": 131426454, "end_pos": 131415323, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062820.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062820.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054792.3", "url": "https://www.ensembl.org/id/ENSSSCP00000054792.3" } ] } }, { "isoform_ac": "A0A287BRY6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80/entry#A0A287BRY6-1", "sequence": { "sequence": "MKTLLFLLYILGTAAAVPTQARFPSGHSNPTAASLSSFQQAETLVTAEQTATPTGRVEDAENEKEPAVSLEEHPHHKAEKSSVLKSKEEDHEESADQDQSYSQNLGSQEQEKSERDLIENSEYMPTEGTLDLKEDMTQPQKEKFPESIDSLGHDDSSIVDSNQQESITKAEENQDSHPQLNRSSKHSPDLSDRGNQEQDPDSPTGKDEGEKEPHEVDTLNDNQEEEREVLQEQSNSEQEEDSTRSDDILEESYQPTQASKMQKDEFEQGNQGREEENANAETEEETASKITKPNQEREWQSPEGKPGLEVISNHEEMDKKTLAKPLLVEPTDDDNVMPRNHGADDDSDDDDEHNASEDAFNPSEAYLERERAPSNYYHTKYKEQREKAHEGENVDTGEAAENQGAKKAEGSPNEDDNSTEGTTRGHSVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHLFATKCRLEGTKKEHQLQLDYFGACKSIPACTDFEVTQFPLRMRDWLKNILMQLYEPNPEHAGYLNEKQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHSELAPLRASLVPMEHCITRFFGECDPNKDKHITLKEWGRCFEIKEEDIDENLLF", "length": 662, "header": "tr|A0A287BRY6-1|A0A287BRY6_PIG Computationally mapped isoform of SPARC-like protein 1 OS=Sus scrofa OX=9823 GN=SPARCL1 PE=1 SV=3 CANONICAL=A0A286ZR80-1" }, "locus": { "chromosome": "8", "start_pos": 131430999, "end_pos": 131412104, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043019.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043019.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058888.3", "url": "https://www.ensembl.org/id/ENSSSCP00000058888.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRX5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRX5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100037275", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100037275", "resource": "KEGG Pathway" }, { "id": "R-SSC-381426", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "resource": "Reactome", "description": "Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" }, { "id": "R-SSC-8957275", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "resource": "Reactome", "description": "Post-translational protein phosphorylation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" }, { "name": "basement membrane", "id": "GO:0005604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005604", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" }, { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "synaptic membrane adhesion", "id": "GO:0099560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099560", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" }, { "name": "regulation of synapse organization", "id": "GO:0050807", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050807", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZR80", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR80" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 181, "end_pos": 183, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" }, { "start_pos": 417, "end_pos": 419, "annotation": "n_glycosylation_sequon" }, { "start_pos": 474, "end_pos": 476, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZR80-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 662, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZR80-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZR80" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZR80", "database": "UniProtKB", "url": 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"database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013846852" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZI40", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI40" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ARMCX1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI40", "locus": { "chromosome": "X", "start_pos": 83136917, "end_pos": 83132792, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038569", "url": "https://www.ensembl.org/id/ENSSSCG00000038569" } ] } } ], "crossref": [ { "id": "ENSSSCG00000038569", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038569", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622470", "url": 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"categories": [ "Protein" ] }, { "id": "A0A287A232-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A232-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRTREAGCVAAGVVIGAGACYCVYKLTWGRDESEKIWEDDDDDEEEEPSDMAETGKGSKANSGAGAGARLQGDSKAKAEVAVELKSGSDIKAEAHSKAQSGGGLEAKAKALFSTLKEQASAKVGKGARLGTISGTRTLAPGLPCPGVRGGGCHPARNGARVGGRASGKSKGRTRGKSTRTPATSWPVRRGKFNFPYKIDDILGAPDLQKVLNILERSNDPFTQEVALVTLGNNAAYSFNQNAIRELGGLPIIAKLIKTKDPIIREKAYNALNNLSVNAENQGKIKTYISQVCDDTMICRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNYFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCIKKIKALANHSDLVVKVKVLKVLTKL", "length": 454, "header": "tr|A0A286ZI40-1|A0A286ZI40_PIG Isoform 1 of Armadillo repeat containing X-linked 1 OS=Sus scrofa OX=9823 GN=ARMCX1 PE=3 SV=1 CANONICAL=A0A286ZI40-1" }, "isoforms": [ { "isoform_ac": "A0A286ZI40-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI40/entry#A0A286ZI40-1", "sequence": { "sequence": "MGRTREAGCVAAGVVIGAGACYCVYKLTWGRDESEKIWEDDDDDEEEEPSDMAETGKGSKANSGAGAGARLQGDSKAKAEVAVELKSGSDIKAEAHSKAQSGGGLEAKAKALFSTLKEQASAKVGKGARLGTISGTRTLAPGLPCPGVRGGGCHPARNGARVGGRASGKSKGRTRGKSTRTPATSWPVRRGKFNFPYKIDDILGAPDLQKVLNILERSNDPFTQEVALVTLGNNAAYSFNQNAIRELGGLPIIAKLIKTKDPIIREKAYNALNNLSVNAENQGKIKTYISQVCDDTMICRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNYFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCIKKIKALANHSDLVVKVKVLKVLTKL", "length": 454, "header": "tr|A0A286ZI40-1|A0A286ZI40_PIG Isoform 1 of Armadillo repeat containing X-linked 1 OS=Sus scrofa OX=9823 GN=ARMCX1 PE=3 SV=1 CANONICAL=A0A286ZI40-1" }, "locus": { "chromosome": "X", "start_pos": 83136517, "end_pos": 83135156, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050927.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050927.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052896.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052896.2" } ] } }, { "isoform_ac": "A0A287A232-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI40/entry#A0A287A232-1", "sequence": { "sequence": "MGVLQYLQLQQRLPAVAEDSTPYVGALLWARESPSDTHPSMGRTREAGCVAAGVVIGAGACYCVYKLTWGRDESEKIWEDDDDDEEEEPSDMAETGKGSKANSGAGAGARLQGDSKAKAEVAVELKSGSDIKAEAHSKAQSGGGLEAKAKALFSTLKEQASAKVGKGARLGTISGTRTLAPGLPCPGVRGGGCHPARNGARVGGRASGKSKGRTRGKSTRTPATSWPVRRGKFNFPYKIDDILGAPDLQKVLNILERSNDPFTQEVALVTLGNNAAYSFNQNAIRELGGLPIIAKLIKTKDPIIREKAYNALNNLSVNAENQGKIKTYISQVCDDTMICRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNYFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCIKKIKALANHSDLVVKVKVLKVLTKL", "length": 494, "header": "tr|A0A287A232-1|A0A286ZI40_PIG Computationally mapped isoform of Armadillo repeat containing X-linked 1 OS=Sus scrofa OX=9823 GN=ARMCX1 PE=3 SV=1 CANONICAL=A0A286ZI40-1" }, "locus": { "chromosome": "X", "start_pos": 83136517, "end_pos": 83134736, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055538.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055538.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037979.1", "url": "https://www.ensembl.org/id/ENSSSCP00000037979.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A232", "url": "https://www.uniprot.org/uniprotkb/A0A287A232" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q5U310-1", "protein_name": "Armadillo repeat-containing X-linked protein 1", "gene_name": "Armcx1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRTREAGCVAAGMVIGAGACYCVYRLTWGKDENEKLWDDEDEEEEEEEESCSGKPEIGGKTVKERKTHVGVGAGAKPQDDSKSKAEANVGPENGPDVKKEVYPESHSEGGLEAKAKALFKSLKEQASAKAGRGIRFPNISRIRTLTSSLPCPGGRGGGCHPGRTGSRARNRTSGKVKRKNRSKSNKAPATAWPVRRGKFSFPYKIDDILSAPDLQKVLNILERTNDPFTQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTRDPIIREKTYNALNNLSVNSENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQTMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKSEGLASSRKEFSRSSLFFLFKESGVCVKKIKALASHKDLVVKVKVLKVLTKL", "length": 461 }, "evidence": [ { "id": "A0A286ZI40", "url": "https://omabrowser.org/oma/group/A0A286ZI40/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CX83-1", "protein_name": "Armadillo repeat-containing X-linked protein 1", "gene_name": "Armcx1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRTREAGCVAAGMVIGAGACYCVYRLTWGKDENEKLWDEEEEEEEEEEEKSCSDKTEKELKTNVGVGARGKPQDDSKSKVEVNVGPENGPGVKKEVHPESQSGGGLEAKAKALFKTLKEQARAKAGRGIRLPNISRNRTLTSSLPCPGGRGGGCHPGRTGSRARNRTSGKVKRKNRSKSNKAPATAWPVRKGKFSFPYKIDDILSAPDLQKVLNILERTNDPFTQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTRDPIIREKTYNALNNLSVNSENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQTMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKSEGLASSRKEFSRSSLFFLFKESGVCVKKIKALASHKDLVVKVKVLKVLTKL", "length": 456 }, "evidence": [ { "id": "A0A286ZI40", "url": "https://omabrowser.org/oma/group/A0A286ZI40/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P291-1", "protein_name": "Armadillo repeat-containing X-linked protein 1", "gene_name": "ARMCX1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEESTDTSEIGVETVKGAKTNAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGGGLEAKAKALFNTLKEQASAKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGGRASGKSKGKARSKSTRAPATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTNDPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSVNAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFALLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTLFENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLKVLTKL", "length": 453 }, "evidence": [ { "id": "A0A286ZI40", "url": "https://omabrowser.org/oma/group/A0A286ZI40/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZI40", "url": 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"Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 274, "end_pos": 276 }, { "start_pos": 315, "end_pos": 317 }, { "start_pos": 354, "end_pos": 356 }, { "start_pos": 437, "end_pos": 439 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZRC3-1", "uniprot_ac": "A0A286ZRC3", "uniprot_id": "A0A286ZRC3_PIG", "mass": { "chemical_mass": 70903.0, "monoisotopic_mass": 70903.0 }, "refseq": { "ac": "XP_005660542", "name": "carnitine O-acetyltransferase isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660542" }, "gene_names": [ { "name": "CRAT", "type": "recommended", "evidence": [ { "id": "A0A286ZRC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ] }, { "name": "CRAT", "type": "synonym", "evidence": [ { "id": "XP_005660542", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660542" } ] } ], "protein_names": [ { "name": "Carnitine O-acetyltransferase", "type": "recommended", "evidence": [ { "id": "A0A286ZRC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#names_and_taxonomy" } ] }, { "name": "2.3.1.137", "type": "synonym", "evidence": [ { "id": "A0A286ZRC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#names_and_taxonomy" } ] }, { "name": "2.3.1.7", "type": "synonym", "evidence": [ { "id": "A0A286ZRC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#names_and_taxonomy" } ] }, { "name": "Carnitine acetyltransferase", "type": "synonym", "evidence": [ { "id": "A0A286ZRC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#names_and_taxonomy" } ] }, { "name": "carnitine 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Also plays a crucial role in the transport of fatty acids for beta-oxidation. Responsible for the synthesis of short- and branched-chain acylcarnitines. Active towards some branched-chain amino acid oxidation pathway (BCAAO) intermediates. Trans-2-enoyl-CoAs and 2-methylacyl-CoAs are poor substrates.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3#function" }, { "database": "UniProtKB", "id": "ARBA00058613", "url": "https://www.uniprot.org/uniprotkb/ARBA00058613#function" }, { "database": "UniProtKB", "id": "A0A287AVT7", "url": "https://www.uniprot.org/uniprotkb/A0A287AVT7#function" }, { "database": "UniProtKB", "id": "A0A5G2R4L7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4L7#function" }, { "database": "UniProtKB", "id": "A0A287A2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287A2X3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa 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"Enzyme and Pathway" ] }, { "id": "21136", "url": "https://www.rhea-db.org/rhea/21136", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44828", "url": "https://www.rhea-db.org/rhea/44828", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44860", "url": "https://www.rhea-db.org/rhea/44860", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44972", "url": "https://www.rhea-db.org/rhea/44972", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44976", "url": "https://www.rhea-db.org/rhea/44976", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44980", "url": "https://www.rhea-db.org/rhea/44980", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44984", "url": "https://www.rhea-db.org/rhea/44984", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44988", "url": "https://www.rhea-db.org/rhea/44988", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44992", "url": "https://www.rhea-db.org/rhea/44992", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44996", "url": "https://www.rhea-db.org/rhea/44996", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "45000", "url": "https://www.rhea-db.org/rhea/45000", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "45004", "url": "https://www.rhea-db.org/rhea/45004", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2X3", "url": "https://www.uniprot.org/uniprotkb/A0A287A2X3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2X3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMX9", "url": "https://www.uniprot.org/uniprotkb/A0A287AMX9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMX9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMX9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVT7", "url": "https://www.uniprot.org/uniprotkb/A0A287AVT7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVT7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVT7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG61", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG61-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG61-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4L7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4L7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4L7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4L7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFA5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFA5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFA5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFA5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RR45", "url": "https://www.uniprot.org/uniprotkb/F1RR45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RR45-1", "url": "https://www.uniprot.org/uniprotkb/F1RR45-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDGQQKEKARPLGFLKPSSLTKVSSHFKTHQDSLPRLPVPPLQQTLDHYLKALQPIVSEEEWAQTKQLVEEFQSPGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPLVIYSSPGMALPKQDFVDLQGQLRFAAKLIEGVLDFKAMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTEHQKVELLRKAVQAHRAYTDLAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMESHINFSVSAYNSCAETNAVRLAHYLEQALLDMRALLQSHPRAKL", "length": 626, "header": "tr|A0A286ZRC3-1|A0A286ZRC3_PIG Isoform 1 of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=1 CANONICAL=A0A286ZRC3-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#A0A286ZRC3-1", "sequence": { "sequence": "MEDGQQKEKARPLGFLKPSSLTKVSSHFKTHQDSLPRLPVPPLQQTLDHYLKALQPIVSEEEWAQTKQLVEEFQSPGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPLVIYSSPGMALPKQDFVDLQGQLRFAAKLIEGVLDFKAMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTEHQKVELLRKAVQAHRAYTDLAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMESHINFSVSAYNSCAETNAVRLAHYLEQALLDMRALLQSHPRAKL", "length": 626, "header": "tr|A0A286ZRC3-1|A0A286ZRC3_PIG Isoform 1 of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=1 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269399332, "end_pos": 269388038, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052662.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052662.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034016.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034016.1" } ] } }, { "isoform_ac": "A0A287A2X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#A0A287A2X3-1", "sequence": { "sequence": "MEDGQQKEKASQLSLVTTLPLCHPCPHPTARKMPEASPSPKGEAPGLPQALLLDEGFQSLQDAPGLTAPAARAPAPADPGPLSQGTAAHRQRRGVGPNQAAGGRVSVSRGRRGAPAEGAGAQGQEDGELGEETEAQRDRSKARATQQLSRRRQATQEGLAGQGPCLQATDQQTAVTHWAHCPSSPLARGPRLVNYATGQQFPNWRPCGKEARPTACLSEWWLKTAYLQYRQPLVIYSSPGMALPKQDFVDLQGQLRFAAKLIEGVLDFKAMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTEHQKVELLRKAVQAHRAYTDLAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMESHINFSVSAYNSCAETNAVRLAHYLEQALLDMRALLQSHPRAKL", "length": 745, "header": "tr|A0A287A2X3-1|A0A286ZRC3_PIG Computationally mapped isoform of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=2 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269399332, "end_pos": 269388038, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061204.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061204.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038068.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038068.2" } ] } }, { "isoform_ac": "A0A287AMX9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#A0A287AMX9-1", "sequence": { "sequence": "MPRAVALGLPGPPRAGERMSRLLCCVQARPLGFLKPSSLTKVSSHFKTHQDSLPRLPVPPLQQTLDHYLKALQPIVSEEEWAQTKQLVEEFQSPGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPLVIYSSPVAHVGAGQGGGRASSPGTLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMESHINFSVSAYNSCAETNAVRLAHYLEQALLDMRALLQSHPRAKL", "length": 604, "header": "tr|A0A287AMX9-1|A0A287AMX9_PIG Computationally mapped isoform of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=3 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269398700, "end_pos": 269388038, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060032.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060032.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045403.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045403.3" } ] } }, { "isoform_ac": "A0A287AVT7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#A0A287AVT7-1", "sequence": { "sequence": "MPRAVALGLPGPPRAGERMSRLLCCVQARPLGFLKPSSLTKVSSHFKTHQDSLPRLPVPPLQQTLDHYLKALQPIVSEEEWAQTKQLVEEFQSPGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPLVIYSSPGMALPKQDFVDLQGQLRFAAKLIEGVLDFKAMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTEHQKVELLRKAVQAHRAYTDLAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMESHINFSVSAYNSCAETNAVRLAHYLEQALLDMRALLQSHPRAKL", "length": 644, "header": "tr|A0A287AVT7-1|A0A287AVT7_PIG Computationally mapped isoform of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=1 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269398700, "end_pos": 269388038, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039132.2", "url": "https://www.ensembl.org/id/ENSSSCT00000039132.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048024.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048024.2" } ] } }, { "isoform_ac": "A0A5G2QG61-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#A0A5G2QG61-1", "sequence": { "sequence": "MEDGQQKEKASQLSLVTTLPLCHPCPHPTARKMPEASPSPKGEAPGLPQALLLDEGFQSLQDAPGLTAPAARAPAPADPGPLSQGTAAHRQRRGVGPNQAAGGRVSVSRGRRGAPAEGAGAQGQEDGELGEETEAQRDRSKARATQQLSRRRQATQEGLAGQGPCLQATDQQTAVTHWAHCPSSPLARGPRLVNYATGQQFPNWRPCGKEARPTACLSEWWLKTAYLQYRQPLVIYSSPGMALPKQDFVDLQGQLRFAAKLIEGVLDFKAMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTEHQKVELLRKAVQAHRAYTDLAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQAHSRSSRALEEEPEAGLRCSAGRLRRRQPGTDRLSSFTGQA", "length": 715, "header": "tr|A0A5G2QG61-1|A0A286ZRC3_PIG Computationally mapped isoform of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=1 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269399332, "end_pos": 269388566, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076858.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076858.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063737.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063737.1" } ] } }, { "isoform_ac": "A0A5G2R4L7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#A0A5G2R4L7-1", "sequence": { "sequence": "MPRAVALGLPGPPRAGERMSRLLCCVQARPLGFLKPSSLTKVSSHFKTHQDSLPRLPVPPLQQTLDHYLKALQPIVSEEEWAQTKQLVEEFQSPGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPLVIYSSPVAHVGAGQGGGRASSPGTLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTEHQKVELLRKAVQAHRAYTDLAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMESHINFSVSAYNSCAETNAVRLAHYLEQALLDMRALLQSHPRAKL", "length": 625, "header": "tr|A0A5G2R4L7-1|A0A286ZRC3_PIG Computationally mapped isoform of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=2 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269398700, "end_pos": 269388038, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084114.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084114.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072153.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072153.2" } ] } }, { "isoform_ac": "A0A8W4FFA5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#A0A8W4FFA5-1", "sequence": { "sequence": "MLSFAARTVARPLGFLKPSSLTKVSSHFKTHQDSLPRLPVPPLQQTLDHYLKALQPIVSEEEWAQTKQLVEEFQSPGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPLVIYSSPGMALPKQDFVDLQGQLRFAAKLIEGVLDFKAMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTEHQKVELLRKAVQAHRAYTDLAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVSRRPRRPRGRGQRLH", "length": 571, "header": "tr|A0A8W4FFA5-1|A0A8W4FFA5_PIG Computationally mapped isoform of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=1 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269401122, "end_pos": 269388732, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101984.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101984.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076996.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076996.1" } ] } }, { "isoform_ac": "F1RR45-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3/entry#F1RR45-1", "sequence": { "sequence": "MLSFAARTVARPLGFLKPSSLTKVSSHFKTHQDSLPRLPVPPLQQTLDHYLKALQPIVSEEEWAQTKQLVEEFQSPGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPLVIYSSPGMALPKQDFVDLQGQLRFAAKLIEGVLDFKAMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDSVTNFSKIKKPPAHITVVHNYQFFELDVYHSDGTPLTSDQIFTQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYSTLIKDKVNRESVRSIQKSIFTVCLDAPMPRVSEDRYRHQVACQMLHGGGGKLNSGNRWFDKTLQFIVAEDGACGLIYEHAAAEGPPITTLVDHVIEFTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVFVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMGDPNVTAICGKAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMESHINFSVSAYNSCAETNAVRLAHYLEQALLDMRALLQSHPRAKL", "length": 605, "header": "tr|F1RR45-1|F1RR45_PIG Computationally mapped isoform of Carnitine O-acetyltransferase OS=Sus scrofa OX=9823 GN=CRAT PE=1 SV=3 CANONICAL=A0A286ZRC3-1" }, "locus": { "chromosome": "1", "start_pos": 269401122, "end_pos": 269388038, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006234.3", "url": "https://www.ensembl.org/id/ENSSSCT00000006234.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006075.3", "url": "https://www.ensembl.org/id/ENSSSCP00000006075.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG61", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG61" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-389887", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-389887", "resource": "Reactome", "description": "Beta-oxidation of pristanoyl-CoA" }, { "id": "R-SSC-70895", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70895", "resource": "Reactome", "description": "Branched-chain amino acid catabolism" }, { "id": "R-SSC-9033241", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9033241", "resource": "Reactome", "description": "Peroxisomal protein import" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AJL7-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLGCVARAAARPYGLLKPAALGKIPGRFLLHQEALPHLPVPPLQQTLDRYLLTLQPIISEEELNHTQELVAEFRKPGGVGERLQKGLERRARKTENWLSDWWLKTAYLEYRLPVVVHSSPGVVLPKQDFQDRQGQLRFAAKLIEGILDFKTMIDNETLPVEYMGGKPLCMNQYYQILSSCRIPGPKRDSIVNYAKGKKQSRHITVVHNFQFFELDVYNSDGSPLTTDQIFIQLEKIWNTSLQTNKEPIGILTTNHRNSWAKAYNNLLKDKTNKESVRTIEKSICTVCLDAPMPRVSEDIYKSRVAAQMLHGGGSRWNSGNRWFDKTLQFIIAEDGSCGLVYEHAPSEGPPIVALLDHIVEYTKKPELVRSPMIPLPMPKKLRFNITPEIKNDIEKAKQNLNIMVEDLDIKVMVFHQFGKAFPKSEKISPDAFIQLALQLAYYRMYGHACPTYESASLRMFRLGRTDTIRSASIESLKFVQSMDSPDKSDQVKTDLLRRATQAHREYTDMAIRGNAIDRHLLGLKLQAIEDLVSIPELFMDTAYAVAMHFNLSTSQVPAKTDCVMCFGPVVPDGYGICYNPMDEHINFAISAFNSCADTNAARMAHYLEKALLDMRSLLQSTPKSKL", "length": 626 }, "evidence": [ { "id": "A0A286ZRC3", "url": "https://omabrowser.org/oma/group/A0A286ZRC3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3IL47-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "Crat", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLAFAARTVVKPLGLLKPSSLMKVSGRFKAHQDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQTPGGVGERLQKGLERRAKKMENWLSDWWLKTAYLQYRQPVVIHSSPGVMLPKQNFVDQQGQLRFAAKLIEGVLDFKSMIDNESLPVEFLGGKPLCMNQYYQILSSCRVPGPKQDSVVNFLKTKKPPMHITVVHNYQFFELDVYHSDGTPFTSDQIFVQLEKIWNSSLQTNKEPIGILTSNHRNTWAKAYNTLIKDKVNRESVNSIQKSIFTVCLDKPVPRVSDDVYRNHVAGQMLHGGGSKLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMLPMPMPKKLRFNITPEIKNDIEKAKQNISIMIQDLDITMLVFHHFGKDFPKSEKLSPDAFIQIALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSSSMDSLAFVKGMDDSTVLEHQKVELLRKAVQAHRAYTDRAIRGESFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPKAKL", "length": 626 }, "evidence": [ { "id": "A0A286ZRC3", "url": "https://omabrowser.org/oma/group/A0A286ZRC3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLAFAARTVVKPLGFLKPFSLMKASSRFKAHQDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWLKTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDTVSNFSKTKKPPTHITVVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKDKVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGPPIVTLLDYVIEYTKKPELVRSPLVPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMDDSSVTEHQKVELLRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQSHPRAKL", "length": 626 }, "evidence": [ { "id": "A0A286ZRC3", "url": "https://omabrowser.org/oma/group/A0A286ZRC3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P47934-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "Crat", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLAFAARTVVKPLGLLKPSSLMKVSGRFKAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAKL", "length": 626 }, "evidence": [ { "id": "A0A286ZRC3", "url": "https://omabrowser.org/oma/group/A0A286ZRC3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q704S8-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "Crat", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLAFAARTVVKPLGLLKPSSLMKVSGRFKAHQDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVLLPKQDFMDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGLKQDSVVNFLKSKKPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNSWAKAYSSLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRSHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNISIMIQDLDIMMLVFHHFGKDFPKSQKLSPDAFIQIALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASTDSLAFVKGMDDPKVPEQQRVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMSFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAKL", "length": 626 }, "evidence": [ { "id": "A0A286ZRC3", "url": "https://omabrowser.org/oma/group/A0A286ZRC3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9VEM4-1", "protein_name": "Choline/carnitine acyltransferase domain-containing protein", "gene_name": "Dmel\\CG5265", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MKFRDNGKVLWNFARISALQQTRYTFGKKMPIASYSTAKDKPKSDQPNLLKYHVLPLEEILNRFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGEQEKNWLAHRWLKVAYLQFRSPVTCFSSPGMTFPKQKFESVHEFVDYTSRVIFGLGEFNDLVHAKKIPIVKMGKNELDNSQFGKVFGTCRIPRRFTDDIVYNPCSDYVVVIYRNHFYQLKIYDKEGKLIIAPCLAVQLEEIMAKEKEPGVPYGILTTDSRDNWAEAYEHLSNTPRNRVALKTIQNAMFTVSLDECTSPKEGRDAEELILTLIHGKGSKCNSANRWMDKTIQLVVNPNGHVGFTYEHSPAEGQPIAMMMDYVVKKMKDDPSYGECGSENFIPAKKIKFCDVSKCVEQWLIIAQKNVDKLVQDLQMKVLKFDCYGKDFIKKQRLGPDSFVQMALQLAFFKLHYEPAAQYESAHLRIFDGGRTETIRSCSNESLAFCHAMDDVSASAQERASKIREAVMCHQMYAKLALLGKGVDRHLFGLKLMAVENCLPVPEFFSSPGYVKSTHFRMSTSQVATKYDAFMGYGPSVEDGYACCYNPREHDIILAISAWRHCQATDHQKIAKALAQSFAEMKDVLETCPASKDKPPELKCKY", "length": 643 }, "evidence": [ { "id": "A0A286ZRC3", "url": "https://omabrowser.org/oma/group/A0A286ZRC3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "fatty acid beta-oxidation using acyl-CoA oxidase", "id": "GO:0033540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033540", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "short-chain fatty acid metabolic process", "id": "GO:0046459", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046459", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "medium-chain fatty acid metabolic process", "id": "GO:0051791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051791", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "carnitine metabolic process, CoA-linked", "id": "GO:0019254", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019254", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "fatty acid metabolic process", "id": "GO:0006631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006631", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "fatty acid beta-oxidation", "id": "GO:0006635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006635", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "acyl-CoA oxidase activity", "id": "GO:0003997", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003997", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "carnitine O-octanoyltransferase activity", "id": "GO:0008458", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008458", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "carnitine O-acetyltransferase activity", "id": "GO:0004092", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004092", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "O-acetyltransferase activity", "id": "GO:0016413", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016413", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" }, { "name": "carnitine O-acyltransferase activity", "id": "GO:0016406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016406", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRC3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRC3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 155, "end_pos": 157, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 238, "end_pos": 240, "annotation": "n_glycosylation_sequon" }, { "start_pos": 384, "end_pos": 386, "annotation": "n_glycosylation_sequon" }, { "start_pos": 399, "end_pos": 401, "annotation": "n_glycosylation_sequon" }, { "start_pos": 486, "end_pos": 488, "annotation": "n_glycosylation_sequon" }, { "start_pos": 550, "end_pos": 552, "annotation": "n_glycosylation_sequon" }, { "start_pos": 586, "end_pos": 588, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17177", "name": "", "equation": "octanoyl-CoA + (R)-carnitine = O-octanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17177", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17177" } ] }, { "id": "21136", "name": "", "equation": "(R)-carnitine + acetyl-CoA = O-acetyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21136", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21136" } ] }, { "id": "44828", "name": "", "equation": "decanoyl-CoA + (R)-carnitine = O-decanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44828", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44828" } ] }, { "id": "44860", "name": "", "equation": "4,8-dimethylnonanoyl-CoA + (R)-carnitine = O-4,8-dimethylnonanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44860", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44860" } ] }, { "id": "44972", "name": "", "equation": "hexanoyl-CoA + (R)-carnitine = O-hexanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44972", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44972" } ] }, { "id": "44976", "name": "", "equation": "propanoyl-CoA + (R)-carnitine = O-propanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44976", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44976" } ] }, { "id": "44980", "name": "", "equation": "butanoyl-CoA + (R)-carnitine = O-butanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44980", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44980" } ] }, { "id": "44984", "name": "", "equation": "3-methylbutanoyl-CoA + (R)-carnitine = O-3-methylbutanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44984", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44984" } ] }, { "id": "44988", "name": "", "equation": "2-methylpropanoyl-CoA + (R)-carnitine = O-isobutanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44988", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44988" } ] }, { "id": "44992", "name": "", "equation": "2-methylbutanoyl-CoA + (R)-carnitine = O-2-methylbutanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44992", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44992" } ] }, { "id": "44996", "name": "", "equation": "acetoacetyl-CoA + (R)-carnitine = O-3-oxobutanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44996", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44996" } ] }, { "id": "45000", "name": "", "equation": "3-hydroxybutanoyl-CoA + (R)-carnitine = O-3-hydroxybutanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45000", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45000" } ] }, { "id": "45004", "name": "", "equation": "2,6-dimethylheptanoyl-CoA + (R)-carnitine = O-2,6-dimethylheptanoyl-(R)-carnitine + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45004", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45004" } ] }, { "id": "R-SSC-390284", "name": "propionyl-CoA + carnitine => propionylcarnitine + CoASH", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "peroxisomal matrix", "input_participant_list": [ "R-ALL-192314" ], "output_participant_list": [ "R-ALL-390274" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-390284", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-390284" } ] }, { "id": "R-SSC-390291", "name": "acetyl-CoA + carnitine => acetylcarnitine + CoASH", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "peroxisomal matrix", "input_participant_list": [], "output_participant_list": [ "R-ALL-390287" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-390291", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-390291" } ] }, { "id": "R-SSC-9033235", "name": "Cargo of PEX5S,L translocates from the cytosol to the peroxisomal matrix", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "peroxisomal membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9033235", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9033235" } ] }, { "id": "R-SSC-9033236", "name": "PEX5S,L:Cargo binds PEX13:PEX14:PEX2:PEX10:PEX12 (Docking and Translocation Module)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "peroxisomal membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9033236", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9033236" } ] }, { "id": "R-SSC-9971123", "name": "CRAT transfers ISB to CAR", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial matrix", "input_participant_list": [], "output_participant_list": [ "R-ALL-9971124" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9971123", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9971123" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-192314", "participant_name": "propionyl CoA [peroxisomal matrix]", "crossref": [ { "id": "57392", "database": "ChEBI", "url": "" }, { "id": "ZINC000008551120", "database": "ZINC", "url": "" }, { "id": "C00100", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-390274", "participant_name": "Propionylcarnitine [peroxisomal matrix]", "crossref": [ { "id": "ZINC000001529576", "database": "ZINC", "url": "" }, { "id": "53210", "database": "ChEBI", "url": "" }, { "id": "HMDB0000824", "database": "HMDB Metabolite", "url": "" } ] }, { "participant_id": "R-ALL-390287", "participant_name": "ACAR [peroxisomal matrix]", "crossref": [ { "id": "4520", "database": "Guide to Pharmacology - Ligands", "url": "" }, { "id": "HMDB0000201", "database": "HMDB Metabolite", "url": "" }, { "id": "ZINC000003644165", "database": "ZINC", "url": "" }, { "id": "57589", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-9971124", "participant_name": "ISB-CAR [mitochondrial matrix]", "crossref": [ { "id": "HMDB0000736", "database": "HMDB Metabolite", "url": "" }, { "id": "84838", "database": "ChEBI", "url": "" }, { "id": "ZINC000005359087", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZRC3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 626, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZRC3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZRC3" } ], 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8X9AES6", "url": "https://www.uniprot.org/uniprotkb/A0A8X9AES6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8X9AES6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8X9AES6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8X9AEV4", "url": "https://www.uniprot.org/uniprotkb/A0A8X9AEV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8X9AEV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8X9AEV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1C4", "url": "https://www.uniprot.org/uniprotkb/F1S1C4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1C4-1", "url": "https://www.uniprot.org/uniprotkb/F1S1C4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGT0", "url": "https://www.uniprot.org/uniprotkb/I3LGT0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGT0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGT0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GM68", "url": "https://www.uniprot.org/uniprotkb/K7GM68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GM68-1", "url": "https://www.uniprot.org/uniprotkb/K7GM68-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGIPSFLALPAARSDWADCMPCHPLGHMLLWTALLFLAPVPGTRAVLPKAEVKLQPAWINVLQEDSVTLTCQGDHDPGNTTTQWFHNGNFTWTENQPSFSFKARRASSGYYRCQTAYSSLSDPVHLDVISDWLLLQTSSLVFQEGEPILLRCHSWRNKPLHKVAFFQNGKSKKFSYVDSNFSIPQANQSHSGEYHCTGFIGKMSYSSQSVNITVQGSSLNNLLVTIVVAVVAWIVAMAIAAAIAAWFRLRRKRISANHTDAEEAAKIEAEDTITYSLLLHPEAAEGEAEASDYQNHI", "length": 297, "header": "tr|A0A0B4J2K0-1|A0A0B4J2K0_PIG Isoform 1 of Fc fragment of IgG, low affinity IIb, receptor (CD32) OS=Sus scrofa OX=9823 GN=FCGR2B PE=1 SV=3 CANONICAL=A0A0B4J2K0-1" }, "isoforms": [ { "isoform_ac": "A0A0B4J2K0-1", "url": 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"https://www.uniprot.org/uniprotkb/A0A0B4J2K0/entry#A0A287B6F3-1", "sequence": { "sequence": "MGIPSFLALPAARSDWADCMPCHPLGHMLLWTALLFLAPVPGTRAVLPKAEVKLQPAWINVLQEDSVTLTCQGDHDPGNTTTQWFHNGNFTWTENQPSFSFKARRASSGYYRCQTAYSSLSDPVHLDVISDWLLLQTSSLVFQEGEPILLRCHSWRNKPLHKVAFFQNGKSKKFSYVDSNFSIPQANQSHSGEYHCTGFIGKMSYSSQSVNITVQGSSLNNLLVTIVVAVVAWIVAMAIAAAIAAWFRLRRKRISGLWLLLAEDTITYSLLLHPEAAEGEAEASDYQNHI", "length": 290, "header": "tr|A0A287B6F3-1|A0A287B6F3_PIG Computationally mapped isoform of Fc fragment of IgG, low affinity IIb, receptor (CD32) OS=Sus scrofa OX=9823 GN=FCGR2B PE=4 SV=1 CANONICAL=A0A0B4J2K0-1" }, "locus": { "chromosome": "4", "start_pos": 88892851, "end_pos": 88874258, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050242.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050242.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052096.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052096.2" } ] } }, { "isoform_ac": "A0A8X9AES6-1", "url": 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] } }, { "isoform_ac": "I3LGT0-1", "url": "https://www.uniprot.org/uniprotkb/A0A0B4J2K0/entry#I3LGT0-1", "sequence": { "sequence": "MGIPSFLALPAARSDWADCMPCHPLGHMLLWTALLFLAPVPGTRAVLPKAEVKLQPAWINVLQEDSVTLTCQGDHDPGNTTTQWFHNGNFTWTENQPSFSFKARRASSGYYRCQTAYSSLSDPVHLDVISDWLLLQTSSLVFQEGEPILLRCHSWRNKPLHKVAFFQNGKSKKFSYVDSNFSIPQANQSHSGEYHCTGFIGKMSYSSQSVNITVQANHTDAEEAAKIEAEDTITYSLLLHPEAAEGEAEASDYQNHI", "length": 257, "header": "tr|I3LGT0-1|A0A0B4J2K0_PIG Computationally mapped isoform of Fc fragment of IgG, low affinity IIb, receptor (CD32) OS=Sus scrofa OX=9823 GN=FCGR2B PE=1 SV=2 CANONICAL=A0A0B4J2K0-1" }, "locus": { "chromosome": "4", "start_pos": 88892851, "end_pos": 88874258, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031531.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031531.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023274.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023274.2" } ] } }, { "isoform_ac": "K7GM68-1", "url": 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDL5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDL5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDL5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDL5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI05", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI05", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI05-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI05-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIT6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIT6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LL91", "url": "https://www.uniprot.org/uniprotkb/I3LL91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LL91-1", "url": "https://www.uniprot.org/uniprotkb/I3LL91-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAGMLCRAQVVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDREP", "length": 246, "header": "tr|A0A286ZHZ7-1|A0A286ZHZ7_PIG Isoform 1 of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=3 CANONICAL=A0A286ZHZ7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZHZ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A286ZHZ7-1", "sequence": { "sequence": "MAAGMLCRAQVVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDREP", "length": 246, "header": "tr|A0A286ZHZ7-1|A0A286ZHZ7_PIG Isoform 1 of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=3 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147482244, "end_pos": 147467095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036801.3", "url": "https://www.ensembl.org/id/ENSSSCT00000036801.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031126.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031126.3" } ] } }, { "isoform_ac": "A0A287A9T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A287A9T6-1", "sequence": { "sequence": "RSFFCHLSTFQLIWFMAAGMLCRAQVVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDRAVKLHSEGRDDELEAASLYTTPNGIVTVTFHETTTM", "length": 295, "header": "tr|A0A287A9T6-1|A0A287A9T6_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=2 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147482289, "end_pos": 147469547, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043183.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043183.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040765.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040765.2" } ] } }, { "isoform_ac": "A0A5G2RBR8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A5G2RBR8-1", "sequence": { "sequence": "MAAGMLCRAQVVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGKRGWAKLAVVTFVDTHLEERKRERERERERKKEREEERK", "length": 248, "header": "tr|A0A5G2RBR8-1|A0A286ZHZ7_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=2 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147482244, "end_pos": 147475007, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067404.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067404.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073795.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073795.2" } ] } }, { "isoform_ac": "A0A8D0YPG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A8D0YPG3-1", "sequence": { "sequence": "KESFFCHLSTFQLIWFMAAGMLCRAQVVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDRAVKLHSEGRDDELEAASLYTTPNGIVTVTFHETTTM", "length": 296, "header": "tr|A0A8D0YPG3-1|A0A286ZHZ7_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=1 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147482368, "end_pos": 147469547, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057470.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057470.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047205.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047205.2" } ] } }, { "isoform_ac": "A0A8W4FBZ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A8W4FBZ3-1", "sequence": { "sequence": "VFRSFFCHLSTFQLIWFMAAGMLCRAQVVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDRGEFPQRYKEGQT", "length": 273, "header": "tr|A0A8W4FBZ3-1|A0A286ZHZ7_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=1 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147482295, "end_pos": 147472958, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095899.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095899.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076373.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076373.1" } ] } }, { "isoform_ac": "A0A8W4FDL5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A8W4FDL5-1", "sequence": { "sequence": "YAAPSLCSVLVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGKRGWAKLAVVTFVDTHLEGGERASQRPVSKGADKDENEVSRGRKTELRKPIKSVLLWQMYTAHIPHAFAEIHPLTYSSLLLTEHLLCQKFNSEDSVPTHGELLVYPGMQKGLGSGKTAC", "length": 327, "header": "tr|A0A8W4FDL5-1|A0A286ZHZ7_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=1 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147478995, "end_pos": 147475715, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106264.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106264.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077346.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077346.1" } ] } }, { "isoform_ac": "A0A8W4FI05-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A8W4FI05-1", "sequence": { "sequence": "VFRSFFCHLSTFQLIWFMAAGMLCRAQVVTQDVRERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDRAVKLHSEGRDDELEAASLYTTPNGIVTVTFHETTTM", "length": 297, "header": "tr|A0A8W4FI05-1|A0A286ZHZ7_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=1 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147482295, "end_pos": 147469547, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101712.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101712.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078853.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078853.1" } ] } }, { "isoform_ac": "A0A8W4FIT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#A0A8W4FIT6-1", "sequence": { "sequence": "MITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDRGEFPQRYKEGQT", "length": 205, "header": "tr|A0A8W4FIT6-1|A0A8W4FIT6_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=1 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147478398, "end_pos": 147472958, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093067.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093067.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079360.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079360.1" } ] } }, { "isoform_ac": "I3LL91-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7/entry#I3LL91-1", "sequence": { "sequence": "MYLNVFGGFFFCIFSILKSNFEGAFFNKKKAYLSYVLISKIERLNTPASLRCSLQNPQEVLIVTWQKIKAVSPENMITFSKNHGVVVQPAYKDKINITQLGLMNSTITFWNTTLEDEGCYKCLFNTFGAGKISGIACLTLSVQPTVSLHYKLSEDQLNITCSANARPAPMISWKISGSGIENSTEILVHPNGTTSVTSILQIKDPKSQVGKEVICQVLHLGTVTDYRETVNKGFWFSVPLLLSIVSLVILLVLISILLYWKRRRNQDRAVKLHSEGRDDELEAASLYTTPNGIVTVTFHETTTM", "length": 304, "header": "tr|I3LL91-1|A0A286ZHZ7_PIG Computationally mapped isoform of CD200 molecule OS=Sus scrofa OX=9823 GN=CD200 PE=1 SV=4 CANONICAL=A0A286ZHZ7-1" }, "locus": { "chromosome": "13", "start_pos": 147478674, "end_pos": 147469547, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024809.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024809.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024858.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024858.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 121, "start_aa": "Thr", "end_pos": 121, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr121", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LL91", "url": "https://www.uniprot.org/uniprotkb/I3LL91" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-198933", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-198933", "resource": "Reactome", "description": "Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell" } ], "orthologs": [ { "uniprot_canonical_ac": "P04218-1", "protein_name": "OX-2 membrane glycoprotein", "gene_name": "Cd200", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGSPVFRRPFCHLSTYSLLWAIAAVALSTAQVEVVTQDERKLLHTTASLRCSLKTTQEPLIVTWQKKKAVGPENMVTYSKAHGVVIQPTYKDRINITELGLLNTSITFWNTTLDDEGCYMCLFNMFGSGKVSGTACLTLYVQPIVHLHYNYFEDHLNITCSATARPAPAISWKGTGSGIENSTESHSHSNGTTSVTSILRVKDPKTQVGKEVICQVLYLGNVIDYKQSLDKGFWFSVPLLLSIVSLVILLVLISILLYWKRHRNQERGESSQGMQRMK", "length": 278 }, "evidence": [ { "id": "A0A286ZHZ7", "url": "https://omabrowser.org/oma/group/A0A286ZHZ7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P41217-1", "protein_name": "OX-2 membrane glycoprotein", "gene_name": "CD200", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MERLVIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYWFSVPLLLSIVSLVILLVLISILLYWKRHRNQDRGELSQGVQKMT", "length": 278 }, "evidence": [ { "id": "A0A286ZHZ7", "url": "https://omabrowser.org/oma/group/A0A286ZHZ7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "neuronal cell body", "id": "GO:0043025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043025", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "regulation of immune response", "id": "GO:0050776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050776", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "negative regulation of macrophage activation", "id": "GO:0043031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043031", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "positive regulation of macrophage activation", "id": "GO:0043032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043032", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "negative regulation of matrix metallopeptidase secretion", "id": "GO:1904465", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904465", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "cellular response to lipopolysaccharide", "id": "GO:0071222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071222", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "positive regulation of transforming growth factor beta production", "id": "GO:0071636", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071636", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "negative regulation of canonical NF-kappaB signal transduction", "id": "GO:0043124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043124", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "cellular response to type II interferon", "id": "GO:0071346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071346", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZHZ7" } ], "pmid": "" }, { "name": "heterotypic cell-cell adhesion", "id": "GO:0034113", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034113", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZHZ7", "url": 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"MAASGESGTSGGGGSTEEAFMTFYSEVKQIEKRDSVLTSKNQIERLTRPGSSYFNLNPFEVLQIDPEVTDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKERKKQLKKEGKPTIVEEDDPELFKQAVYKQTMKLFAELEIKRKEREAKEMHERKRQREEEIEAQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKMEQRE", "length": 253 }, "evidence": [ { "id": "A0A286ZJL8", "url": "https://omabrowser.org/oma/group/A0A286ZJL8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q642C0-1", "protein_name": "DnaJ homolog subfamily C member 8", "gene_name": "Dnajc8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAASGESGASGGGGSTEEAFMTFYSEVKQIEKRDSVLTSKNQIERLTRPGSSYFNLNPFEVLQIDPEVTDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKERKKQLKKEGKPTNVEEDDPELFKQAVYKQTMKLFAELEIKRKEREAKEMHERKRQREEEIEAQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKMEQRE", "length": 253 }, "evidence": [ { "id": "A0A286ZJL8", "url": "https://omabrowser.org/oma/group/A0A286ZJL8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6NZB0-1", "protein_name": "DnaJ homolog subfamily C member 8", "gene_name": "Dnajc8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAASGESGASGGGGSTEEAFMTFYSEVKQIEKRDSVLTSKNQIERLTRPGSSYFNLNPFEVLQIDPEVTDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKERKKQLKKEGKPTNVEEDDPELFKQAVYKQTMKLFAELEIKRKEREAKEMHERKRQREEEIEAQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKMEQRE", "length": 253 }, "evidence": [ { "id": "A0A286ZJL8", "url": "https://omabrowser.org/oma/group/A0A286ZJL8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C580-1", "protein_name": "Chaperone DnaJ-domain superfamily protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGEVKVDDDAILKSFLAEVGEVERDNEVGRILSCFKLNPFEHLNLSFDSSTDDVKRQYRKISLMVHPDKCKHPQAQEAFGALAKAQQLLLNDQERDYILTQVHAAKEELKMKRKKQLKKDTASKIKSLVDEGKHEHIYEQSEEFQKELKLKVREILTDQEWRRRKMAMRISEEEGRLKKDEAEQKEIWKKKREHEEQWEGTREKRVSSWRDFQKAGKKAKKGETRPPKLKTEDPNKSYVQRPVKKG", "length": 246 }, "evidence": [ { "id": "A0A286ZJL8", "url": "https://omabrowser.org/oma/group/A0A286ZJL8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VCH9-1", "protein_name": "J domain-containing protein", "gene_name": "Dmel\\CG10375", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSSSSARDQPGTSHDNFEEFYTEVKEIEKRDSVLTPSQQIDRLLRPGSTYFNLNPFEVLQIEPEVELADIKKRYRTLSILVHPDKNPDNQERAQMAFDIVSRSWKILENELTRKRCLEVYEEAKGRTDQMIAEKRKKLKKEGRPTEPIPEDDPTKYKHAIYVMVMKLFADMERRRQKLDQRDQEERKRKRETEIEEEERIKADREWQQNFEESRQSRVNSWHDFQSGAGKSKKAKKQKHMTGMMVPPKFKPESR", "length": 254 }, "evidence": [ { "id": "A0A286ZJL8", "url": "https://omabrowser.org/oma/group/A0A286ZJL8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJL8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJL8" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJL8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJL8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "Hsp70 protein binding", "id": "GO:0030544", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030544", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJL8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJL8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 238, "end_pos": 240, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZJL8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJL8" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 57, "end_pos": 124, "start_aa": "Asn", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 238, "end_pos": 240 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZRI2-1", "uniprot_ac": "A0A286ZRI2", "uniprot_id": "A0A286ZRI2_PIG", "mass": { "chemical_mass": 34454.0, "monoisotopic_mass": 34454.0 }, "refseq": { "ac": "XP_020929784", "name": "ubiquitin fusion degradation protein 1 homolog isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929784" }, "gene_names": [ { "name": "UFD1", "type": "recommended", "evidence": [ { "id": "A0A286ZRI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ] }, { "name": "UFD1", "type": "synonym", "evidence": [ { "id": "XP_020929784", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929784" } ] } ], "protein_names": [ { "name": "Ubiquitin recognition factor in ER-associated degradation protein 1", "type": "recommended", "evidence": [ { "id": "A0A286ZRI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin fusion degradation protein 1 homolog isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020929784", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929784" } ] } ], "function": [ { "annotation": "Essential component of the ubiquitin-dependent proteolytic pathway which degrades ubiquitin fusion proteins. The ternary complex containing UFD1, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. It may be involved in the development of some ectoderm-derived structures. Acts as a negative regulator of type I interferon production via the complex formed with VCP and NPLOC4, which binds to RIGI and recruits RNF125 to promote ubiquitination and degradation of RIGI.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RB53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB53#function" }, { "database": "UniProtKB", "id": "ARBA00058252", "url": "https://www.uniprot.org/uniprotkb/ARBA00058252#function" }, { "database": "UniProtKB", "id": "A0A286ZS40", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS40#function" }, { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2#function" }, { "database": "UniProtKB", "id": "A0A8D0T264", "url": "https://www.uniprot.org/uniprotkb/A0A8D0T264#function" }, { "database": "UniProtKB", "id": "F1RK61", "url": "https://www.uniprot.org/uniprotkb/F1RK61#function" }, { "database": "UniProtKB", "id": "A0A8W4FBP1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBP1#function" }, { "database": "UniProtKB", "id": "A0A8W4FF56", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF56#function" }, { "database": "UniProtKB", "id": "A0A5G2QD53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD53#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UFD1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2", "locus": { "chromosome": "14", "start_pos": 51113713, "end_pos": 51133072, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010121", "url": "https://www.ensembl.org/id/ENSSSCG00000010121" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010121", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010121", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153062", "url": "https://www.ncbi.nlm.nih.gov/gene/100153062", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004854", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004854", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042299", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042299", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055418", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055418", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WMMQQLC", "url": "https://omabrowser.org/oma/group/WMMQQLC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZRI2", "url": "https://www.orthodb.org/?gene=A0A286ZRI2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12555", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12555", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12555:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12555:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03152", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03152", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24842", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24842", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-110320", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-110320", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5689880", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8951664", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9755511", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9755511", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020929784", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929784", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZS40", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS40", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZS40-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS40-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD53-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RB53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RB53-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0T264", "url": "https://www.uniprot.org/uniprotkb/A0A8D0T264", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0T264-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0T264-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBP1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBP1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBP1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF56", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF56", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF56-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF56-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RK61", "url": "https://www.uniprot.org/uniprotkb/F1RK61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RK61-1", "url": "https://www.uniprot.org/uniprotkb/F1RK61-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQIQHEESAEGEADHGGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP", "length": 307, "header": "tr|A0A286ZRI2-1|A0A286ZRI2_PIG Isoform 1 of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=2 CANONICAL=A0A286ZRI2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRI2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#A0A286ZRI2-1", "sequence": { "sequence": "MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQIQHEESAEGEADHGGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP", "length": 307, "header": "tr|A0A286ZRI2-1|A0A286ZRI2_PIG Isoform 1 of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=2 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51132677, "end_pos": 51114591, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038807.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038807.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034237.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034237.2" } ] } }, { "isoform_ac": "A0A286ZS40-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#A0A286ZS40-1", "sequence": { "sequence": "FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQIQHEESAEGEADHGGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP", "length": 295, "header": "tr|A0A286ZS40-1|A0A286ZS40_PIG Computationally mapped isoform of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=2 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51129739, "end_pos": 51114591, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051728.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051728.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034444.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034444.2" } ] } }, { "isoform_ac": "A0A5G2QD53-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#A0A5G2QD53-1", "sequence": { "sequence": "MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQIQHEESAEGEADHGGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEMTEGVLCILNKGVSFVFLSVLGPSSPQWLACLFEAMQVCRPQFWCEFPLWRSG", "length": 336, "header": "tr|A0A5G2QD53-1|A0A286ZRI2_PIG Computationally mapped isoform of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=1 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51132677, "end_pos": 51117925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085656.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085656.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061521.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061521.1" } ] } }, { "isoform_ac": "A0A5G2RB53-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#A0A5G2RB53-1", "sequence": { "sequence": "FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP", "length": 268, "header": "tr|A0A5G2RB53-1|A0A286ZRI2_PIG Computationally mapped isoform of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=2 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51129739, "end_pos": 51114591, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080746.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080746.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067833.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067833.2" } ] } }, { "isoform_ac": "A0A8D0T264-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#A0A8D0T264-1", "sequence": { "sequence": "MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQIQHEESAEGEADHGGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDDLVGSCWDCPRFTEVSMRVSGGPGAQVPGAEFLTNAPPPQRHCTPEMATTPTWG", "length": 338, "header": "tr|A0A8D0T264-1|A0A286ZRI2_PIG Computationally mapped isoform of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=1 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51132677, "end_pos": 51114661, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064766.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064766.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037707.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037707.2" } ] } }, { "isoform_ac": "A0A8W4FBP1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#A0A8W4FBP1-1", "sequence": { "sequence": "FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQIQHEESAEGEADHGGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEVSVSCR", "length": 288, "header": "tr|A0A8W4FBP1-1|A0A286ZRI2_PIG Computationally mapped isoform of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=1 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51129739, "end_pos": 51118197, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094899.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094899.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076812.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076812.1" } ] } }, { "isoform_ac": "A0A8W4FF56-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#A0A8W4FF56-1", "sequence": { "sequence": "MFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKMEPHTLLFFLGRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVSGRQHSVQGWQGREEVADRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEVSVSCR", "length": 265, "header": "tr|A0A8W4FF56-1|A0A8W4FF56_PIG Computationally mapped isoform of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=1 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51129727, "end_pos": 51118197, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103967.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103967.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077875.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077875.1" } ] } }, { "isoform_ac": "F1RK61-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2/entry#F1RK61-1", "sequence": { "sequence": "FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQIQHEESAAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP", "length": 290, "header": "tr|F1RK61-1|F1RK61_PIG Computationally mapped isoform of Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Sus scrofa OX=9823 GN=UFD1 PE=1 SV=3 CANONICAL=A0A286ZRI2-1" }, "locus": { "chromosome": "14", "start_pos": 51129739, "end_pos": 51114591, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011082.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011082.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010794.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010794.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD53" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-110320", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-110320", "resource": "Reactome", "description": "Translesion Synthesis by POLH" }, { "id": "R-SSC-5689880", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "resource": "Reactome", "description": "Ub-specific processing proteases" }, { "id": "R-SSC-8951664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "resource": "Reactome", "description": "Neddylation" }, { "id": "R-SSC-9755511", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9755511", "resource": "Reactome", "description": "KEAP1-NFE2L2 pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P70362-1", "protein_name": "Ubiquitin recognition factor in ER-associated degradation protein 1", "gene_name": "Ufd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFIAFSGEGQSLRKKGRKP", "length": 307 }, "evidence": [ { "id": "A0A286ZRI2", "url": "https://omabrowser.org/oma/group/A0A286ZRI2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q92890-2", "protein_name": "Ubiquitin recognition factor in ER-associated degradation protein 1", "gene_name": "UFD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP", "length": 307 }, "evidence": [ { "id": "A0A286ZRI2", "url": "https://omabrowser.org/oma/group/A0A286ZRI2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9ES53-1", "protein_name": "Ubiquitin recognition factor in ER-associated degradation protein 1", "gene_name": "Ufd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPMVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP", "length": 307 }, "evidence": [ { "id": "A0A286ZRI2", "url": "https://omabrowser.org/oma/group/A0A286ZRI2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "VCP-NPL4-UFD1 AAA ATPase complex", "id": "GO:0034098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034098", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" }, { "name": "UFD1-NPL4 complex", "id": "GO:0036501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036501", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" }, { "name": "retrograde protein transport, ER to cytosol", "id": "GO:0030970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030970", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" }, { "name": "ERAD pathway", "id": "GO:0036503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036503", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" }, { "name": "cellular response to misfolded protein", "id": "GO:0071218", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071218", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" }, { "name": "negative regulation of RIG-I signaling pathway", "id": "GO:0039536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0039536", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" }, { "name": "negative regulation of type I interferon production", "id": "GO:0032480", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032480", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "K48-linked polyubiquitin modification-dependent protein binding", "id": "GO:0036435", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036435", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" }, { "name": "polyubiquitin modification-dependent protein binding", "id": "GO:0031593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031593", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRI2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 60, "end_pos": 62, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZRI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRI2" }, { "id": "PF03152", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03152" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin fusion degradation protein 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"MEQGKHLAGLILAITLLQGTMAQLKEGKHSVLLDDNREDGSVLLTCGLPDQNIRWFKDGKEICSLNNSRSTCNLGSSSKDPRGIYWCEGSKENSKRLQVYYRTSDKQTLLSNDQLYQPLKDREDDQYSHLQGNNSRKN", "length": 138, "header": "tr|A0A8W4FL37-1|A0A8W4FEY7_PIG Computationally mapped isoform of CD3 gamma subunit of T-cell receptor complex OS=Sus scrofa OX=9823 GN=CD3G PE=4 SV=1 CANONICAL=A0A8W4FEY7-1" }, "locus": { "chromosome": "9", "start_pos": 45654150, "end_pos": 45645364, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101595.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101595.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079623.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079623.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5S6HPQ5", "url": "https://www.uniprot.org/uniprotkb/A0A5S6HPQ5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transmembrane signaling receptor activity", "id": "GO:0004888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004888", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEY7", 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"A0A286ZJV8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8/entry#names_and_taxonomy" } ] }, { "name": "krev interaction trapped protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020958029", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958029" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KRIT1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8", "locus": { "chromosome": "9", "start_pos": 72142835, "end_pos": 72185661, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015313", "url": "https://www.ensembl.org/id/ENSSSCG00000015313" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015313", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015313", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13197", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13197", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14473", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14473", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100517669", "url": "https://www.ncbi.nlm.nih.gov/gene/100517669", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000299", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000299", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014352", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014352", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019748", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019748", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019749", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019749", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032022", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032022", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035963", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035963", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041791", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041791", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051594", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051594", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056485", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056485", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517669", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517669", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZJV8", "url": "https://www.orthodb.org/?gene=A0A286ZJV8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13283", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13283", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13283:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13283:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00373", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00373", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16705", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16705", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24521", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24521", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24522", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24522", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020958029", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958029", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1YNU3", "url": "https://www.uniprot.org/uniprotkb/A0A8D1YNU3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1YNU3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1YNU3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1YRH5", "url": "https://www.uniprot.org/uniprotkb/A0A8D1YRH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1YRH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1YRH5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFD0", "url": "https://www.uniprot.org/uniprotkb/F1SFD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFD0-1", "url": "https://www.uniprot.org/uniprotkb/F1SFD0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNPENIEDAYVAVIRPKNAASLNSREYRAKSYEILLHEVPIEGQKKKKKKVLLETKLQGNSEITQGILDYVVETTKPISPANQGIRGKRVILMKKFPLDGEKMGREAALFIVPSVVKDNTKYTYTPGCPVFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRPSPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADACIYNPLFGSDLQYTNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKERQWVDDFPLHRSACEGDTELLSRLLNERFSVNQLDSDHWAPIHYACWYGKVEATRILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPEVDRHITDQQGRSPLNICEENKQNNWEDAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEIEKKIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPITKLKSKAPHWTNRILHEYKNLSTSEGISKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKALLISLKYGCFMWQLGDADTCFQIHSMENKMSFIVHTKQASLVVKLLMKLNGQLMPTERNS", "length": 736, "header": "tr|A0A286ZJV8-1|A0A286ZJV8_PIG Isoform 1 of Krev interaction trapped protein 1 OS=Sus scrofa OX=9823 GN=KRIT1 PE=4 SV=2 CANONICAL=A0A286ZJV8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8/entry#A0A286ZJV8-1", "sequence": { "sequence": "MGNPENIEDAYVAVIRPKNAASLNSREYRAKSYEILLHEVPIEGQKKKKKKVLLETKLQGNSEITQGILDYVVETTKPISPANQGIRGKRVILMKKFPLDGEKMGREAALFIVPSVVKDNTKYTYTPGCPVFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRPSPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADACIYNPLFGSDLQYTNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKERQWVDDFPLHRSACEGDTELLSRLLNERFSVNQLDSDHWAPIHYACWYGKVEATRILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPEVDRHITDQQGRSPLNICEENKQNNWEDAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEIEKKIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPITKLKSKAPHWTNRILHEYKNLSTSEGISKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKALLISLKYGCFMWQLGDADTCFQIHSMENKMSFIVHTKQASLVVKLLMKLNGQLMPTERNS", "length": 736, "header": "tr|A0A286ZJV8-1|A0A286ZJV8_PIG Isoform 1 of Krev interaction trapped protein 1 OS=Sus scrofa OX=9823 GN=KRIT1 PE=4 SV=2 CANONICAL=A0A286ZJV8-1" }, "locus": { "chromosome": "9", "start_pos": 72179826, "end_pos": 72145258, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037162.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037162.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031754.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031754.2" } ] } }, { "isoform_ac": "A0A8D1YNU3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8/entry#A0A8D1YNU3-1", "sequence": { "sequence": "MGNPENIEDAYVAVIRPKNAASLNSREYRAKSYEILLHEVPIEGQKKKKKKVLLETKLQGNSEITQGILDYVVETTKPISPANQGIRGKRVILMKKFPLDGEKMGREAALFIVPSVVKDNTKYTYTPGCPVFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRPSPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADACIYNPLFGSDLQYTNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKYGKVEATRILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPEVDRHITDQQGRSPLNICEENKQNNWEDAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEIEKKIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPITKLKSKAPHWTNRILHEYKNLSTSEGISKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKALLISLKYGCFMWQLGDADTCFQIHSMENKMSFIVHTKQASLVVKLLMKLNGQLMPTERNS", "length": 688, "header": "tr|A0A8D1YNU3-1|A0A286ZJV8_PIG Computationally mapped isoform of Krev interaction trapped protein 1 OS=Sus scrofa OX=9823 GN=KRIT1 PE=4 SV=1 CANONICAL=A0A286ZJV8-1" }, "locus": { "chromosome": "9", "start_pos": 72179826, "end_pos": 72145258, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037393.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037393.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056284.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056284.2" } ] } }, { "isoform_ac": "A0A8D1YRH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8/entry#A0A8D1YRH5-1", "sequence": { "sequence": "MAKQRLTVTSWAEAMGNPENIEDAYVAVIRPKNAASLNSREYRAKSYEILLHEVPIEGQKKKKKKVLLETKLQGNSEITQGILDYVVETTKPISPANQGIRGKRVILMKKFPLDGEKMGREAALFIVPSVVKDNTKYTYTPGCPVFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRPSPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADACIYNPLFGSDLQYTNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKERQWVDDFPLHRSACEGDTELLSRLLNERFSVNQLDSDHWAPIHYACWYGKVEATRILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPEVDRHITDQQGRSPLNICEENKQNNWEDAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEIEKKIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPITKLKSKAPHWTNRILHEYKNLSTSEGISKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKALLISLKYGCFMWQLGDADTCFQIHSMENKMSFIVHTKQASLVVKLLMKLNGQLMPTERNS", "length": 750, "header": "tr|A0A8D1YRH5-1|A0A286ZJV8_PIG Computationally mapped isoform of Krev interaction trapped protein 1 OS=Sus scrofa OX=9823 GN=KRIT1 PE=4 SV=1 CANONICAL=A0A286ZJV8-1" }, "locus": { "chromosome": "9", "start_pos": 72185373, "end_pos": 72145258, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049748.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049748.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046954.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046954.2" } ] } }, { "isoform_ac": "F1SFD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8/entry#F1SFD0-1", "sequence": { "sequence": "MGNPENIEDAYVAVIRPKNAASLNSREYRAKSYEILLHEVPIEGQKKKKKKVLLETKLQGNSEITQGILDYVVETTKPISPANQGIRGKRVILMKKFPLDGEKMGREAALFIVPSVVKDNTKYTYTPGCPVFYCLQDIMRVCSESSTHFATLTARMLIALDKWLDERHAQSHFIPALFRPSPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKADACIYNPLFGSDLQYTNRVDKVVINPYFGLGAPDYSKIQIPKQEKWQRSMSSVTEDKERQWVDDFPLHRSACEGDTELLSRLLNERFSVNQLDSDHWAPIHYACWYGKVEATRILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPEVDRHITDQQGRSPLNICEENKQNNWEDAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEIEKKIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPITKLKSKAPHWTNRILHEYKNLSTSEGISKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKVEFQLFSCF", "length": 684, "header": "tr|F1SFD0-1|A0A286ZJV8_PIG Computationally mapped isoform of Krev interaction trapped protein 1 OS=Sus scrofa OX=9823 GN=KRIT1 PE=4 SV=3 CANONICAL=A0A286ZJV8-1" }, "locus": { "chromosome": "9", "start_pos": 72179826, "end_pos": 72152425, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016686.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016686.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016240.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016240.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFD0", "url": "https://www.uniprot.org/uniprotkb/F1SFD0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517669", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517669", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "angiogenesis", "id": "GO:0001525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001525", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "negative regulation of endothelial cell proliferation", "id": "GO:0001937", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001937", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "negative regulation of endothelial cell apoptotic process", "id": "GO:2000352", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000352", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "negative regulation of angiogenesis", "id": "GO:0016525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016525", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "negative regulation of endothelial cell migration", "id": "GO:0010596", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010596", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "cell redox homeostasis", "id": "GO:0045454", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045454", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "integrin activation", "id": "GO:0033622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033622", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "regulation of establishment of cell polarity", "id": "GO:2000114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000114", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "negative regulation of developmental process", "id": "GO:0051093", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051093", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "regulation of multicellular organismal development", "id": "GO:2000026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000026", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "phosphatidylinositol-4,5-bisphosphate binding", "id": "GO:0005546", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005546", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "GTPase regulator activity", "id": "GO:0030695", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030695", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "cell-cell junction", "id": "GO:0005911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005911", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJV8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJV8" } ], "pmid": "" }, { "name": "protein-containing complex", "id": 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"MEAKDVSKAEDRAEDPGSENKGQPDIAAPDLPQGGQTPGPTALWEMLERKFLEYQQLDPRSPAERQKSLLNLLPQFLKAWEHSVGIICFPSLQRLAEDVSEQLAQEIQKVLVGKPAEQARVAAGQLLRWKGDADQDGYLLLKSVYVLTGTDSETLGRVAESGLPALLLQCLYLFFVFPLEKDELFESDIQVQRMFVQMLINICSETQGLEGLLSGNELQSLMIATTCLREHSCSFWKEPTFCVLKAISKAQNLSVIQYLQAMDCIKISLQNLSRLADALPVPEVSEAMNLVLGFVKDSYSISPALFLEFENGEGYPLLLKVLLRYDELTQTEADPHLEELLGLVVWLTTCGRSELKVFDSVTYPQLEGFKFHHDASGVTVKNLQAFQVLQNAFHKASDSILCTKVLSSIRAMWAWNARNFFLLEWTLQPISQFVEIVPLKPTLVQMHFFQLLETLVFELHYVPHEILRKVQRLIKESPEPLFTLVALQSILRIAGGDPLFTDIFRDSGLLGLLLAQLRKQAKILRKSGNRESNPGVEDTERELTCVMLRTVVTLLKGSVRNAVVLKDHGMVPFIKIFLDDECYRGEYMSIIVGALCSSTQGELQLKLDLLKSLLRILETPKGRAAFRVSSGFNGLLSLLSDLEGSLQEPPLQTWGVVSPSQTLELVLHTLCALSAALHLDPVNGNFFRRNGLYEKLAEDLCLLGCFGAVEEEDAPLHSWEDTKVRPFADLLSAAFSSGSLLPPKIQSCLQILGFLDSMARGTLHLRRDLKDSPRARQEPVVDAQSGETSSHPQGNSKQWPDLEERTDEGDPVIMHPGVLCIMVRLLPRLYHEDHPQLSEEIQCSMASHIQSLVKSQRNRQVMCEAGMLRTLMTSCHQPLSTGNSPLHSRLIRIFEKLASQAIEPDVLRQFLGLGIPSPPSAATKVLNSSPVHGGDPGCSGSQAAAPMPAEGPAAAAQDASPHPAVIQASRPSGQTQGSTTALQTALSLISMTSPRNLQPQRAALAPSFVEFDMSVEGYGCLFIPTLSTVMGTSTEYSVSGGIGTGAARSFPPPGGLTFSCWFLISRHSAVTEGHPLRFLTLVRHLSRTEQPFVCFSVSLCPEDLSLVVSTEEKEFQPLDVMEPEDDLEPSAGRQLRVRCGQLLACGQWHHLAVVVSKEMKRNCTVSTYLDGQVIGTAKMLYIQVLPGPFLSMDPSSFVDVYGYIATPRVWKQKSSLIWRLGPAYLFEEAISVETLEVINKLGPRYCGNFQAVQYGILPLVAEERVSFGLHIASSSVTSAADIRNTYNEVDSRLIAKEMNISSRDNAMPVFLLRNCAGHLSGSLRTIGGVAVGQLGVRVFHSSPAASSLDFIGGPAILLGLISLATDDHTMYAAVKVLHSVLTSNVMCDRLMQHICGYQIMAFLLRKKTSFLNHRIFQLILSIAGTAELGFGSSAVINVGVFQHILCNFELWMNAADNLELSLFSHLMEILQSSREGPRNAEVAHQARLIPKLVFLFNEPGLTPSKMPTIIAILGCQLRGHFSLQDLLSVSFSLCLKIGLFVVYTLKPSSVNERQICVDGAADPSMPAGSQTSGKTIWLRNQLLEMLLSVISSSQLHLSSETKEEIFLNLGPDWFLLFVQGHLHPSTVVLGLKLLLHFLSSPSLLGRFKDGLSAGSWVERSSEGMDIMMDNLKSHPPMLDQSSCLLPGFRVLSDLLAHHVHIPEVYLIVSTFFLQTPLTELTDGPKDSLDAMLQWLLHMHRKEEVVRAGLCTEGALLLLEMLKATMSQPPAGPGESAWERTFPASVLQFLGLVHSTYPQDPAWRAPEFLQTLAAVTFPLGTHKGAMTESAQNISGPEAETEGDSTVEGLQVPAESHPTQKQLREFMQLLLRELLLGSSNPKQWLPLEVLLEVEADFQSEVLLSTMEIFHVTSGGRAPMLRGSREPQPNAEAAVAPSLANISHFTQKLVEKLYSGMFSADPRHILLFIMEHIMVVIENTSSQKDSTISALYSSLNKVILYCLSKPQQSLSECLSLLNVLGFLQEHWDIIFATYNSNASFLLCLMHCLLLLSTRSYPEGFGLESKPRVTPYHQVFLSPNEESREKREEDFPSLNDVQHNIQKVVRTLWQQLVAQRRQELEDTVKIDLSVKPGESEVKIEEVTPLWEETMLKAWQYYLASEKKLVASRSNVGHHSKVSSWSGSLSSAMRLMPGRQTKDPECKAEDFVSCIENYRRRGQELYASLYKDHVQRRRCGNIQAASAWARIQEQLFGELGLWGQTADATPCPQWELDWREGPARMRKRLRRLSPLEALSRERLKESQDRNGDISQINVENQDELTPKEAEGERDELADCTQLTFFPALHESLHSEDFLELCRERQVILQELLDHEKVTQKYSLVIVQGHLVCEGLLLFGQQHFYICENFTLSPMGDVYCTRHCLSNISDPFIFNMCSKDRSSDNYSCQRHSYGDLRELRQARFLLQDIALEIFFQNGYSKFLVFYNSDRSKVFKSFCSFQPSLKGKSFSEDPLNLRRYPGSDRTMLQKWQKRDISNFEYLMHLNTMAGRTYNDYMQYPVFPWVLADYSSQTLNLTNPKTFRDLSKPMGAQTKERRLKFIQRFKEVEKTEGDMTVQCHYCTHYSSAIIVASYLVRMPPFTQAFCSLQGGSFDVADRMFHSMKNAWESASRENMSDVRELTPEFFYLPEFLTNCNALEFGCMQDGTALGDVQLPPWADGDPRKFISLHRQALESDFVSANLHHWIDLIFGYKHSIRDPLIRSTILGFVSNFGQVPRQLFTKPHPARTAAGKPSPGKDVSTPASLHGHPQPFFYSLQSLRPSQVTVKDMYLFSLGSESPKGAIGHIVPTDKTILAVETNKMLLPPHWSRTFSWGFDDFSCCLGNYGSDKILMTFENLAPWGRCLCAVCPSPTVIITSGASAVVCVWELSIAKGRPTGLRLKQALYGHTQAVTCLAASVPFNLLVSGSQDRTCILWDLDRLTHVSRLPAHREGISAIAISDISGTIVSCAGAHLSLWNVNGQPLASITTAWGPEGAITCCCVMEGPAWDTNHVIVTGSQDGMVRIWKTEDVKMSVPRQAAPEEPWALPPSPRGHRWEKNLALCRELDVSVALTGKPNKTNSAVTALAVSRNQTKLLVGDEKGRIFCWSAEG", "length": 3138, "header": "tr|A0A8W4FEV8-1|A0A8W4FEV8_PIG Isoform 1 of WDFY family member 4 OS=Sus scrofa OX=9823 GN=WDFY4 PE=4 SV=1 CANONICAL=A0A8W4FEV8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RMF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEV8/entry#A0A5G2RMF1-1", "sequence": { "sequence": "MEAKDVSKAEDRAEDPGSENKGQPDIAAPDLPQGGQTPGPTALWEMLERKFLEYQQLDPRSPAERQKSLLNLLPQFLKAWEHSVGIICFPSLQRLAEDVSEQLAQEIQKVLVGKPAEQARVAAGQLLRWKGDADQDGYLLLKSVYVLTGTDSETLGRVAESGLPALLLQCLYLFFVFPLEKDELFESDIQVQRMFVQMLINICSETQGLEGLLSGNELQSLMIATTCLREHSCSFWKEPTFCVLKAISKAQNLSVIQYLQAMDCIKISLQNLSRLADALPVPEVSEAMNLVLGFVKDSYSISPALFLEFENGEGYPLLLKVLLRYDELTQTEADPHLEELLGLVVWLTTCGRSELKVFDSVTYPQLEGFKFHHDASGVTVKNLQAFQVLQNAFHKASDSILCTKVLSSIRAMWAWNARNFFLLEWTLQPISQFVEIVPLKPTLVQMHFFQLLETLVFELHYVPHEILRKVQRLIKESPEPLFTLVALQSILRIAGGDPLFTDIFRDSGLLGLLLAQLRKQAKILRKSGNRESNPGVEDTERELTCVMLRTVVTLLKGSVRNAVVLKDHGMVPFIKIFLDDECYRGEYMSIIVGALCSSTQGELQLKLDLLKSLLRILETPKGRAAFRVSSGFNGLLSLLSDLEGSLQEPPLQTWGVVSPSQTLELVLHTLCALSAALHLDPVNGNFFRRNGLYEKLAEDLCLLGCFGAVEEEDAPLHSWEDTKVRPFADLLSAAFSSGSLLPPKIQSCLQILGFLDSMARGTLHLRRDLKDSPRARQEPVVDAQSGETSSHPQGNSKQWPDLEERTDEGDPVIMHPGVLCIMVRLLPRLYHEDHPQLSEEIQCSMASHIQSLVKSQRNRQVMCEAGMLRTLMTSCHQPLSTGNSPLHSRLIRIFEKLASQAIEPDVLRQFLGLGIPSPPSAATKVLNSSPVHGGDPGCSAAPMPAEGPAAAAQDASPHPAVIQASRPSGQTQGSTTALQTALSLISMTSPRNLQPQRAALAPSFVEFDMSVEGYGCLFIPTLSTVMGTSTEYSVSGGIGTGAARSFPPPGGLTFSCWFLISRHSAVTEGHPLRFLTLVRHLSRTEQPFVCFSVSLCPEDLSLVVSTEEKEFQPLDVMEPEDDLEPSAGRQLRVRCGQLLACGQWHHLAVVVSKEMKRNCTVSTYLDGQVIGTAKMLYIQVLPGPFLSMDPSSFVDVYGYIATPRVWKQKSSLIWRLGPAYLFEEAISVETLEVINKLGPRYCGNFQAVQYGILPLVAEERVSFGLHIASSSVTSAADIRNTYNEVDSRLIAKEMNISSRDNAMPVFLLRNCAGHLSGSLRTIGGVAVGQLGVRVFHSSPAASSLDFIGGPAILLGLISLATDDHTMYAAVKVLHSVLTSNVMCDRLMQHICGYQIMAFLLRKKTSFLNHRIFQLILSIAGTAELGFGSSAVINVGVFQHILCNFEVNWRLVGFLQSQDRPRNAEVAHQARLIPKLVFLFNEPGLTPSKMPTIIAILGCQLRGHFSLQDFVSFSLCLKIGLFVVYTLKPSSVNERQICVDGAADPSMPAGSQTSGKTIWLRNQLLEMLLSVISSSQLHLSSETKEEIFLNLGPDWFLLFVQGHLHPSTVVLGLKLLLHFLSSPSLLGRFKDGLSAGSWVERSSEGMDIMMDNLKSHPPMLDQSSCLLPGFRVLSDLLAHHVHIPEVYLIVSTFFLQTPLTELTDGPKDSLDAMLQWLLHMHRKEEVVRAGLCTEGALLLLEMLKATMSQPPAGPGESAWERTFPASVLQFLGLVHSTYPQDPAWRAPEFLQTLAAVTFPLGTHKGAMTESAQNISGPEAETEGDSTVEGLQVPAESHPTQKQLREFMQLLLRELLLGSSNPKQWLPLEVLLEVGWKGSDFQSEVLLSTMEIFHVTSGGRAPMLRGSREPQPNAEAAVAPSLANISHFTQKLVEKLYSGMFSADPRHILLFIMEHIMVIENTSSQKDSTISALYSSLNKVILYCLSKPQQSLSECLSLLNVLGFLQEHWDIIFATYNSNASFLLCLMHCLLLLSTRSYPEGFGLESKPRVTPYHQVFLSPNEESREKREEDFPSLNDVQHNIQKVVRTLWQQLVAQRRQELEDTVKIDLSVKPGESEVKIEEVTPLWEETMLKAWQYYLASEKKLVASRSNVGHHSKVSSWSGSLSSAMRLMPGRQTKDPECKAEDFVSCIENYRRRGQELYASLYKDHVQRRRCGNIQAASAWARIQEQLFGELGLWGQTADATPCPQWELDWREGPARMRKRLRRLSPLEALSRERLKESQDRNGDISQINVENQDELTPKEAEGERDELADCTQLTFFPALHESLHSEDFLELCRERQVILQELLDHEKVTQKYSLVIVQGHLVCEGLLLFGQQHFYICENFTLSPMGDVYCTRHCLSNISDPFIFNMCSKDRSSDNYSCQRHSYGDLRELRQARFLLQDIALEIFFQNGYSKFLVFYNSDRSKVFKRDISNFEYLMHLNTMAGRTYNDYMQYPVFPWVLADYSSQTLNLTNPKTFRDLSKPMGAQTKERRLKFIQRFKEVEKTEGDMTVQCHYCTHYSSAIIVASYLVRMPPFTQAFCSLQGGSFDVADRMFHSMKNAWESASRENMSDVRELTPEFFYLPEFLTNCNALEFGCMQDGTALGDVQLPPWADGDPRKFISLHRQALESDFVSANLHHWIDLIFGYKHSIRDPLIRSTILGFVSNFGQVPRQLFTKPHPARTAAGKPSPGKDVSTPASLHGHPQPFFYSLQSLRPSQVTVKDMYLFSLGSESPKGAIGHIVPTDKTILAVETNKMLLPPHWSRTFSWGFDDFSCCLGNYGSDKILMTFENLAPWGRCLCAVCPSPTVIITSGASAVVCVWELSIAKGRPTGLRLKQALYGHTQAVTCLAASVPFNLLVSGSQDRTCILWDLDRLTHVSRLPAHREGISAIAISDISGTIVSCAGAHLSLWNVNGQPLASITTAWGPEGAITCCCVMEGPAWDTNHVIVTGSQDGMVRIWKTEDVKMSVPRQAAPEEPWALPPSPRGNCPGLAQPSLPSSLLGPGIAAPPRPAEPREAIEPLGINQTKLLVGDEKGRIFCWSAEG", "length": 3084, "header": "tr|A0A5G2RMF1-1|A0A8W4FEV8_PIG Computationally mapped isoform of WDFY family member 4 OS=Sus scrofa OX=9823 GN=WDFY4 PE=4 SV=2 CANONICAL=A0A8W4FEV8-1" }, "locus": { "chromosome": "14", "start_pos": 89632320, "end_pos": 89372475, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067792.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067792.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073754.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073754.2" } ] } }, { "isoform_ac": "A0A8W4FEV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEV8/entry#A0A8W4FEV8-1", "sequence": { "sequence": "MEAKDVSKAEDRAEDPGSENKGQPDIAAPDLPQGGQTPGPTALWEMLERKFLEYQQLDPRSPAERQKSLLNLLPQFLKAWEHSVGIICFPSLQRLAEDVSEQLAQEIQKVLVGKPAEQARVAAGQLLRWKGDADQDGYLLLKSVYVLTGTDSETLGRVAESGLPALLLQCLYLFFVFPLEKDELFESDIQVQRMFVQMLINICSETQGLEGLLSGNELQSLMIATTCLREHSCSFWKEPTFCVLKAISKAQNLSVIQYLQAMDCIKISLQNLSRLADALPVPEVSEAMNLVLGFVKDSYSISPALFLEFENGEGYPLLLKVLLRYDELTQTEADPHLEELLGLVVWLTTCGRSELKVFDSVTYPQLEGFKFHHDASGVTVKNLQAFQVLQNAFHKASDSILCTKVLSSIRAMWAWNARNFFLLEWTLQPISQFVEIVPLKPTLVQMHFFQLLETLVFELHYVPHEILRKVQRLIKESPEPLFTLVALQSILRIAGGDPLFTDIFRDSGLLGLLLAQLRKQAKILRKSGNRESNPGVEDTERELTCVMLRTVVTLLKGSVRNAVVLKDHGMVPFIKIFLDDECYRGEYMSIIVGALCSSTQGELQLKLDLLKSLLRILETPKGRAAFRVSSGFNGLLSLLSDLEGSLQEPPLQTWGVVSPSQTLELVLHTLCALSAALHLDPVNGNFFRRNGLYEKLAEDLCLLGCFGAVEEEDAPLHSWEDTKVRPFADLLSAAFSSGSLLPPKIQSCLQILGFLDSMARGTLHLRRDLKDSPRARQEPVVDAQSGETSSHPQGNSKQWPDLEERTDEGDPVIMHPGVLCIMVRLLPRLYHEDHPQLSEEIQCSMASHIQSLVKSQRNRQVMCEAGMLRTLMTSCHQPLSTGNSPLHSRLIRIFEKLASQAIEPDVLRQFLGLGIPSPPSAATKVLNSSPVHGGDPGCSGSQAAAPMPAEGPAAAAQDASPHPAVIQASRPSGQTQGSTTALQTALSLISMTSPRNLQPQRAALAPSFVEFDMSVEGYGCLFIPTLSTVMGTSTEYSVSGGIGTGAARSFPPPGGLTFSCWFLISRHSAVTEGHPLRFLTLVRHLSRTEQPFVCFSVSLCPEDLSLVVSTEEKEFQPLDVMEPEDDLEPSAGRQLRVRCGQLLACGQWHHLAVVVSKEMKRNCTVSTYLDGQVIGTAKMLYIQVLPGPFLSMDPSSFVDVYGYIATPRVWKQKSSLIWRLGPAYLFEEAISVETLEVINKLGPRYCGNFQAVQYGILPLVAEERVSFGLHIASSSVTSAADIRNTYNEVDSRLIAKEMNISSRDNAMPVFLLRNCAGHLSGSLRTIGGVAVGQLGVRVFHSSPAASSLDFIGGPAILLGLISLATDDHTMYAAVKVLHSVLTSNVMCDRLMQHICGYQIMAFLLRKKTSFLNHRIFQLILSIAGTAELGFGSSAVINVGVFQHILCNFELWMNAADNLELSLFSHLMEILQSSREGPRNAEVAHQARLIPKLVFLFNEPGLTPSKMPTIIAILGCQLRGHFSLQDLLSVSFSLCLKIGLFVVYTLKPSSVNERQICVDGAADPSMPAGSQTSGKTIWLRNQLLEMLLSVISSSQLHLSSETKEEIFLNLGPDWFLLFVQGHLHPSTVVLGLKLLLHFLSSPSLLGRFKDGLSAGSWVERSSEGMDIMMDNLKSHPPMLDQSSCLLPGFRVLSDLLAHHVHIPEVYLIVSTFFLQTPLTELTDGPKDSLDAMLQWLLHMHRKEEVVRAGLCTEGALLLLEMLKATMSQPPAGPGESAWERTFPASVLQFLGLVHSTYPQDPAWRAPEFLQTLAAVTFPLGTHKGAMTESAQNISGPEAETEGDSTVEGLQVPAESHPTQKQLREFMQLLLRELLLGSSNPKQWLPLEVLLEVEADFQSEVLLSTMEIFHVTSGGRAPMLRGSREPQPNAEAAVAPSLANISHFTQKLVEKLYSGMFSADPRHILLFIMEHIMVVIENTSSQKDSTISALYSSLNKVILYCLSKPQQSLSECLSLLNVLGFLQEHWDIIFATYNSNASFLLCLMHCLLLLSTRSYPEGFGLESKPRVTPYHQVFLSPNEESREKREEDFPSLNDVQHNIQKVVRTLWQQLVAQRRQELEDTVKIDLSVKPGESEVKIEEVTPLWEETMLKAWQYYLASEKKLVASRSNVGHHSKVSSWSGSLSSAMRLMPGRQTKDPECKAEDFVSCIENYRRRGQELYASLYKDHVQRRRCGNIQAASAWARIQEQLFGELGLWGQTADATPCPQWELDWREGPARMRKRLRRLSPLEALSRERLKESQDRNGDISQINVENQDELTPKEAEGERDELADCTQLTFFPALHESLHSEDFLELCRERQVILQELLDHEKVTQKYSLVIVQGHLVCEGLLLFGQQHFYICENFTLSPMGDVYCTRHCLSNISDPFIFNMCSKDRSSDNYSCQRHSYGDLRELRQARFLLQDIALEIFFQNGYSKFLVFYNSDRSKVFKSFCSFQPSLKGKSFSEDPLNLRRYPGSDRTMLQKWQKRDISNFEYLMHLNTMAGRTYNDYMQYPVFPWVLADYSSQTLNLTNPKTFRDLSKPMGAQTKERRLKFIQRFKEVEKTEGDMTVQCHYCTHYSSAIIVASYLVRMPPFTQAFCSLQGGSFDVADRMFHSMKNAWESASRENMSDVRELTPEFFYLPEFLTNCNALEFGCMQDGTALGDVQLPPWADGDPRKFISLHRQALESDFVSANLHHWIDLIFGYKHSIRDPLIRSTILGFVSNFGQVPRQLFTKPHPARTAAGKPSPGKDVSTPASLHGHPQPFFYSLQSLRPSQVTVKDMYLFSLGSESPKGAIGHIVPTDKTILAVETNKMLLPPHWSRTFSWGFDDFSCCLGNYGSDKILMTFENLAPWGRCLCAVCPSPTVIITSGASAVVCVWELSIAKGRPTGLRLKQALYGHTQAVTCLAASVPFNLLVSGSQDRTCILWDLDRLTHVSRLPAHREGISAIAISDISGTIVSCAGAHLSLWNVNGQPLASITTAWGPEGAITCCCVMEGPAWDTNHVIVTGSQDGMVRIWKTEDVKMSVPRQAAPEEPWALPPSPRGHRWEKNLALCRELDVSVALTGKPNKTNSAVTALAVSRNQTKLLVGDEKGRIFCWSAEG", "length": 3138, "header": "tr|A0A8W4FEV8-1|A0A8W4FEV8_PIG Isoform 1 of WDFY family member 4 OS=Sus scrofa OX=9823 GN=WDFY4 PE=4 SV=1 CANONICAL=A0A8W4FEV8-1" }, "locus": { "chromosome": "14", "start_pos": 89632320, "end_pos": 89372475, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098627.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098627.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077397.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077397.1" } ] } }, { "isoform_ac": "A0A8W4FHK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEV8/entry#A0A8W4FHK6-1", "sequence": { "sequence": "MEAKDVSKAEDRAEDPGSENKGQPDIAAPDLPQGGQTPGPTALWEMLERKFLEYQQLDPRSPAERQKSLLNLLPQFLKAWEHSVGIICFPSLQRLAEDVSEQLAQEIQKVLVGKPAEQARVAAGQLLRWKGDADQDGYLLLKSVYVLTGTDSETLGRVAESGLPALLLQCLYLFFVFPLEKDELFESDIQVQRMFVQMLINICSETQGLEGLLSGNELQSLMIATTCLREHSCSFWKEPTFCVLKAISKAQNLSVIQYLQAMDCIKISLQNLSRLADALPVPEVSEAMNLVLGFVKDSYSISPALFLEFENGEGYPLLLKVLLRYDELTQTEADPHLEELLGLVVWLTTCGRSELKVFDSVTYPQLEGFKFHHDASGVTVKNLQAFQVLQNAFHKASDSILCTKVLSSIRAMWAWNARNFFLLEWTLQPISQFVEIVPLKPTLVQMHFFQLLETLVFELHYVPHEILRKVQRLIKESPEPLFTLVALQSILRIAGGDPLFTDIFRDSGLLGLLLAQLRKQAKILRKSGNRESNPGVEDTERELTCVMLRTVVTLLKGSVRNAVVLKDHGMVPFIKIFLDDECYRGEYMSIIVGALCSSTQGELQLKLDLLKSLLRILETPKGRAAFRVSSGFNGLLSLLSDLEGSLQEPPLQTWGVVSPSQTLELVLHTLCALSAALHLDPVNGNFFRRNGLYEKLAEDLCLLGCFGAVEEEDAPLHSWEDTKVRPFADLLSAAFSSGSLLPPKIQSCLQILGFLDSMARGTLHLRRDLKDSPRARQEPVVDAQSGETSSHPQGNSKQWPDLEERTDEGDPVIMHPGVLCIMVRLLPRLYHEDHPQLSEEIQCSMASHIQSLVKSQRNRQVMCEAGMLRTLMTSCHQPLSTGNSPLHSRLIRIFEKLASQAIEPDVLSPHPAVIQASRPSGQTQGSTTALQTALSLISMTSPRNLQPQRAALAPSFVEFDMSVEGYGCLFIPTLSTVMGTSTEYSVSGGIGTGAARSFPPPGGLTFSCWFLISRHSAVTEGHPLRFLTLVRHLSRTEQPFVCFSVSLCPEDLSLVVSTEEKEFQPLDVMEPEDDLEPSAGRQLRVRCGQLLACGQWHHLAVVVSKEMKRNCTVSTYLDGQVIGTAKMLYIQVLPGPFLSMDPSSFVDVYGYIATPRVWKQKSSLIWRLGPAYLFEEAISVETLEVINKLGPRYCGNFQAVQYGILPLVAEERVSFGLHIASSSVTSAADIRNTYNEVDSRLIAKEMNISSRDNAMPVFLLRNCAGHLSGSLRTIGGVAVGQLGVRVFHSSPAASSLDFIGGPAILLGLISLATDDHTMYAAVKVLHSVLTSNVMCDRLMQHICGYQIMAFLLRKKTSFLNHRIFQLILSIAGTAELGFGSSAVINVGVFQHILCNFEVNWRLVGFLQSQDRPRNAEVAHQARLIPKLVFLFNEPGLTPSKMPTIIAILGCQLRGHFSLQDFVSFSLCLKIGLFVVYTLKPSSVNERQICVDGAADPSMPAGSQTSGKTIWLRNQLLEMLLSVISSSQLHLSSETKEEIFLNLGPDWFLLFVQGHLHPSTVVLGLKLLLHFLSSPSLLGRFKDGLSAGSWVERSSEGMDIMMDNLKSHPPMLDQSSCLLPGFRVLSDLLAHHVHIPEVYLIVSTFFLQTPLTELTDGPKDSLDAMLQWLLHMHRKEEVVRAGLCTEGALLLLEMLKATMSQPPAGPGESAWERTFPASVLQFLGLVHSTYPQDPAWRAPEFLQTLAAVTFPLGTHKPQPNAEAAVAPSLANISHFTQKLVEKLYSGMFSADPRHILLFIMEHIMVIENTSSQKDSTISALYSSLNKVILYCLSKPQQSLSECLSLLNVLGFLQEHWDIIFATYNSNASFLLCLMHCLLLLSTRSYPEGFGLESKPRVTPYHQVFLSPNEESREKREEDFPSLNDVQHNIQKVVRTLWQQLVAQRRQELEDTVKIDLSVKPGESEVKIEEVTPLWEETMLKAWQYYLASEKKLVASRSNVGHHSKVSSWSGSLSSAMRLMPGRQTKDPECKAEDFVSCIENYRRRGQELYASLYKDHVQRRRCGNIQAASAWARIQEQLFGELGLWGQTADATPCPQWELDWREGPARMRKRLRRLSPLEALSRERLKESQDRNGDISQINVENQDELTPKEAEGERDELADCTQLTFFPALHESLHSEDFLELCRERQVILQELLDHEKVTQKYSLVIVQGHLVCEGLLLFGQQHFYICENFTLSPMGDVYCTRHCLSNISDPFIFNMCSKDRSSDNYSCQRHSYGDLRELRQARFLLQDIALEIFFQNGYSKFLVFYNSDRSKVFKRDISNFEYLMHLNTMAGRTYNDYMQYPVFPWVLADYSSQTLNLTNPKTFRDLSKPMGAQTKERRLKFIQRFKEVEKTEGDMTVQCHYCTHYSSAIIVASYLVRMPPFTQAFCSLQGGSFDVADRMFHSMKNAWESASRENMSDVRELTPEFFYLPEFLTNCNALEFGCMQDGTALGDVQLPPWADGDPRKFISLHRQALESDFVSANLHHWIDLIFGYKHSIRDPLIRSTILGFVSNFGQVPRQLFTKPHPARTAAGKPSPGKDVSTPASLHGHPQPFFYSLQSLRPSQVTVKDMYLFSLGSESPKGAIGHIVPTDKTILAVETNKMLLPPHWSRTFSWGFDDFSCCLGNYGSDKILMTFENLAPWGRCLCAVCPSPTVIITSGASAVVCVWELSIAKGRPTGLRLKQALYGHTQAVTCLAASVPFNLLVSGSQDRTCILWDLDRLTHVSRLPAHREGISAIAISDISGTIVSCAGAHLSLWNVNGQPLASITTAWGPEGAITCCCVMEGPAWDTNHVIVTGSQDGMVRIWKTEDVKMSVPRQAAPEEPWALPPSPRGNCPGLAQPSLPSSLLGPGIAAPPRPAEPREAIEPLGINQTKLLVGDEKGRIFCWSAEG", "length": 2932, "header": "tr|A0A8W4FHK6-1|A0A8W4FHK6_PIG Computationally mapped isoform of WDFY family member 4 OS=Sus scrofa OX=9823 GN=WDFY4 PE=4 SV=1 CANONICAL=A0A8W4FEV8-1" }, "locus": { "chromosome": "14", "start_pos": 89632320, "end_pos": 89372475, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106377.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106377.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078356.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078356.1" } ] } }, { "isoform_ac": "A0A8W4FRG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEV8/entry#A0A8W4FRG3-1", "sequence": { "sequence": 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"length": 3078, "header": "tr|A0A8W4FRG3-1|A0A8W4FRG3_PIG Computationally mapped isoform of WDFY family member 4 OS=Sus scrofa OX=9823 GN=WDFY4 PE=4 SV=1 CANONICAL=A0A8W4FEV8-1" }, "locus": { "chromosome": "14", "start_pos": 89632320, "end_pos": 89372475, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099082.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099082.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081216.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081216.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 41, "start_aa": "Thr", "end_pos": 41, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr41", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RMF1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMF1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "antigen processing and presentation", "id": "GO:0019882", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019882", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEV8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEV8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1162, "end_pos": 1164, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1299, "end_pos": 1301, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1831, "end_pos": 1833, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1938, "end_pos": 1940, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1976, "end_pos": 1978, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2034, "end_pos": 2036, "annotation": "n_glycosylation_sequon" }, { 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"MENFSLLSISGPRISSSVLSTFPDIMSSRATSLPDCILGDPQNGEQLRRNCTIYRPWFSPYSYFVCTDKESHLETYSFPEVQRDEGRGDNCLLEDMAESICSSSSSPENVCLREATKKSRHGLNSMDYITSQDILIASRWHPVQQSGYKCAACCRMYPTLHSLKSHIKGGFKEGFSCKVYYRKLKTLWGKEQKARPGDRLSSGSCQAFK", "length": 209, "header": "tr|A0A286ZI03-1|A0A286ZI03_PIG Isoform 1 of Spermatosis associated 46 OS=Sus scrofa OX=9823 GN=SPATA46 PE=4 SV=1 CANONICAL=A0A286ZI03-1" }, "locus": { "chromosome": "4", "start_pos": 88153262, "end_pos": 88150461, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051875.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051875.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031131.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031131.1" } ] } }, { "isoform_ac": "A0A8D0UDA6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI03/entry#A0A8D0UDA6-1", "sequence": { "sequence": 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"url": "https://www.uniprot.org/uniprotkb/A0A8W4FF18-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSPDEVSVWGAGFGPEGGEPAGVRPAGPGAQRGPGPGPDAGPPQSGEGEGGGGFRDPKGFESETEELEAGGLVLWGREGRPGSPADDKGVALDLANESAAAILRQLADLDVLGVRRSPSPESCAPAAAAEVSAVWAGLEAGAGSGGASAQGCGEAQQALARCLHLGGPEAGWAWPNRKRGTKSRLPLAASRQRPPAEGPVGLPSDPESSDEFGEIQLMRVSIYPRGGGQAQPCSPEAPGFTLPHFQVRENFLHVPGAFLAPALRGFTSVVERQGVGEPDISSPKKMQSILWGKEGSRPTAAAAAAAGGLPRATPRKKGAQEKKPLGGASALALGRTFPPWGQRVSAAPLEPATFPPIAGVPLLGRSRKYSLVPSGTKQSKHAGAGKKPAARRARESELVVAGEDNDPDGDQVARGQLPTHRPGPSCPYLHHGYPSSGDLSTRAPHVAGDSEPSALNQVAVMARGPAPSGDLETLDHPPRRERQQQPPGAQGCPRCLLLQREIDDLKEQLGMRNQGQRAVS", "length": 521, "header": "tr|A0A8W4FF18-1|A0A8W4FF18_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FF18-1" }, "isoforms": [ { "isoform_ac": "A0A287BAS7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF18/entry#A0A287BAS7-1", "sequence": { "sequence": "MSSPDEVSVWGAGFGPEGGEPAGVRPAGPGAQRGPGPGPDAGPPQSGEGEGGGGFRDPKGFESETEELEAGGLVLWGREGRPGSPADDKGVALDLANESAAAILRQLADLDVLGVRRSPSPESCAPAAAAEVSAVWAGLEAGAGSGGASAQGCGEAQQALARCLHLGGPEAGWAWPNRKRGTKSRLPLAASRQRPPAEGPVGLPSDPESSDEFGEIQLMRVSIYPRGGGQAQPCSPEAPGFTLPHFQVRENFLHVPGAFLAPALRGFTSVVERQGVGEPDISSPKKMQSILWGKEGSRPTAAAAAAAGGLPRATPRKKGAQEKKPLGGASALALGRTFPPWGQRVSAAPLEPATFPPIAGVPLLGRSRKYSLVPSGTKQSKHAGAGKKPAARRARESELVVAGEDNDPDGDQVARGQLPTHRPGPSCPYLHHGYPSSGDLSTRAPHVAGDSEPSALNQVAVMARGPAPSGDLETLDHPPRRERQQQPPGAQGCPRRLLMPLPIAAAMRYLADMFQTL", "length": 517, "header": "tr|A0A287BAS7-1|A0A287BAS7_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=A0A8W4FF18-1" }, "locus": { "chromosome": "X", "start_pos": 57682353, "end_pos": 57678722, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037745.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037745.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053200.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053200.3" } ] } }, { "isoform_ac": "A0A8W4F745-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF18/entry#A0A8W4F745-1", "sequence": { "sequence": "MSSPDEVSVWGAGFGPEGGEPAGVRPAGPGAQRGPGPGPDAGPPQSGEGEGGGGFRDPKGFESETEELEAGGLVLWGREGRPGSPADDKGVALDLANESAAAILRQLADLDVLGVRRSPSPESCAPAGAGSGGASAQGCGEAQQALARCLHLGGPEAGWAWPNRKRGTKSRLPLAASRQRPPAEGPVGLPSDPESSDEFGEIQLMRVSIYPRGGGQAQPCSPEAPGFTLPHFQVRENFLHVPGAFLAPALRGFTSVVERQGVGEPDISSPKKMQSILWGKEGSRPTAAAAAAAGGLPRATPRKKGAQEKKPLGGASALALGRTFPPWGQRVSAAPLEPATFPPIAGVPLLGRSRKYSLVPSGTKQSKHAGAGKKPAARRARESELVVAGEDNDPDGDQVLPTHRPGPSCPYLHHGYPSSGDLSTRAPHVAGDSEPSALNQVAVMARGPAPSGEPGGCETLGRERRGGERPRLCLRWELSLAPSPLLPQETELRQGWP", "length": 497, "header": "tr|A0A8W4F745-1|A0A8W4FF18_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FF18-1" }, "locus": { "chromosome": "X", "start_pos": 57680915, "end_pos": 57678722, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092409.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092409.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079267.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079267.1" } ] } }, { "isoform_ac": "A0A8W4FBZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF18/entry#A0A8W4FBZ4-1", "sequence": { "sequence": "LPPSSGLGAERAEPSPETKRPSGCGEAQQALARCLHLGGPEAGWAWPNRKRGTKSRLPLAASRQRPPAEGPVGLPSDPESSDEFGEIQLMRVSIYPRGGGQAQPCSPEAPGFTLPHFQVRENFLHVPGAFLAPALRGFTSVVERQGVGEPDISSPKKMQSILWGKEGSRPTAAAAAAAGGLPRATPRKKGAQEKKPLGGASALALGRTFPPWGQRVSAAPLEPATFPPIAGVPLLGRSRKYSLVPSGTKQSKHAGAGKKPAARRARESELVVAGEDNDPDGDQVARGQLPTHRPGPSCPYLHHGYPSSGDLSTRAPHVAGDSEPSALNQVAVMARGPAPSGDLETLDHPPRRERQQQPPGAQGCPRCLLLQREIDDLKEQLGMRNQGQRAVS", "length": 392, "header": "tr|A0A8W4FBZ4-1|A0A8W4FF18_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FF18-1" }, "locus": { "chromosome": "X", "start_pos": 57698729, "end_pos": 57695101, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092061.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092061.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076840.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076840.1" } ] } }, { "isoform_ac": "A0A8W4FER9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF18/entry#A0A8W4FER9-1", "sequence": { "sequence": "LPPSSGSPSPESCAPAAAAEVSAVWAGLEAGAGSGGASAQGCGEAQQALARCLHLGGPEAGWAWPNRKRGTKSRLPLAASRQRPPAEGPVGLPSDPESSDEFGEIQLMRVSIYPRGGGQAQPCSPEAPGFTLPHFQVRENFLHVPGAFLAPALRGFTSVVERQGVGEPDISSPKKMQSILWGKEGSRPTAAAAAAAGGLPRATPRKKGAQEKKPLGGASALALGRTFPPWGQRVSAAPLEPATFPPIAGVPLLGRSRKYSLVPSGTKQSKHAGAGKKPAARRARESELVVAGEDNDPDGDQVARGQLPTHRPGPSCPYLHHGYPSSGDLSTRAPHVAGDSEPSALNQVAVMARGPAPSGDLETLDHPPRRERQQQPPGAQGCPRRLLMPLPIAAAMRYLADMFQTL", "length": 406, "header": "tr|A0A8W4FER9-1|A0A8W4FF18_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FF18-1" }, "locus": { "chromosome": "X", "start_pos": 57682353, "end_pos": 57678119, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098518.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098518.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077919.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077919.1" } ] } }, { "isoform_ac": "A0A8W4FF18-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF18/entry#A0A8W4FF18-1", "sequence": { "sequence": "MSSPDEVSVWGAGFGPEGGEPAGVRPAGPGAQRGPGPGPDAGPPQSGEGEGGGGFRDPKGFESETEELEAGGLVLWGREGRPGSPADDKGVALDLANESAAAILRQLADLDVLGVRRSPSPESCAPAAAAEVSAVWAGLEAGAGSGGASAQGCGEAQQALARCLHLGGPEAGWAWPNRKRGTKSRLPLAASRQRPPAEGPVGLPSDPESSDEFGEIQLMRVSIYPRGGGQAQPCSPEAPGFTLPHFQVRENFLHVPGAFLAPALRGFTSVVERQGVGEPDISSPKKMQSILWGKEGSRPTAAAAAAAGGLPRATPRKKGAQEKKPLGGASALALGRTFPPWGQRVSAAPLEPATFPPIAGVPLLGRSRKYSLVPSGTKQSKHAGAGKKPAARRARESELVVAGEDNDPDGDQVARGQLPTHRPGPSCPYLHHGYPSSGDLSTRAPHVAGDSEPSALNQVAVMARGPAPSGDLETLDHPPRRERQQQPPGAQGCPRCLLLQREIDDLKEQLGMRNQGQRAVS", "length": 521, "header": "tr|A0A8W4FF18-1|A0A8W4FF18_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A8W4FF18-1" }, "locus": { "chromosome": "X", "start_pos": 57698126, "end_pos": 57695101, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093879.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093879.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076906.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076906.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F745", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F745" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 97, "end_pos": 99, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 97, "end_pos": 99 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A8W4FEU4-1", "uniprot_ac": "A0A8W4FEU4", "uniprot_id": "A0A8W4FEU4_PIG", "mass": { "chemical_mass": 21590.0, "monoisotopic_mass": 21590.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "40S ribosomal protein SA", "type": "recommended", "evidence": [ { "id": "A0A8W4FEU4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEU4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEU4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEU4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEU4", "locus": {} } ], "crossref": [ { "id": "A0A8W4FEU4", "url": "https://alphafold.ebi.ac.uk/entry/A0A8W4FEU4", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd01425", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01425", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005707", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005707", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032281", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032281", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11489", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11489", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00318", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00318", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16122", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16122", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FEU4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEU4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "HTFAAATGATPIAGRFIPGTLTNQIQVAFWEPRLLVVTDPRAEHQPLTEASYVNLPTIALCNTDSPLHYVDIAIPCNNKRACSVGLIWWVLAREVPRMCGTISCEHPEEIEKEEQAAAEKDVTKEEFQGEWTAPAPEFTATQPEVADWSEGLQVPSVPIQQFPTEDWSAQPATEDWSEAPTSQATEWVGMTTEWS", "length": 195, "header": "tr|A0A8W4FEU4-1|A0A8W4FEU4_PIG Isoform 1 of 40S ribosomal protein SA OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A8W4FEU4-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FEU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEU4/entry#A0A8W4FEU4-1", "sequence": { "sequence": "HTFAAATGATPIAGRFIPGTLTNQIQVAFWEPRLLVVTDPRAEHQPLTEASYVNLPTIALCNTDSPLHYVDIAIPCNNKRACSVGLIWWVLAREVPRMCGTISCEHPEEIEKEEQAAAEKDVTKEEFQGEWTAPAPEFTATQPEVADWSEGLQVPSVPIQQFPTEDWSAQPATEDWSEAPTSQATEWVGMTTEWS", "length": 195, "header": "tr|A0A8W4FEU4-1|A0A8W4FEU4_PIG Isoform 1 of 40S ribosomal protein SA OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A8W4FEU4-1" }, "locus": { "chromosome": "17", "start_pos": 31488856, "end_pos": 31487923, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061516.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061516.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077779.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077779.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An 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} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEZ0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEZ0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": 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"MMAAAWMEAARVSVTFDDVAVTFTQEEWGQLDPAQRTLYQEVMLENRGLLVSLGCPVPRPELICQLEHGRELWMVQKDLSQSTCPGEQGKPTTTKPTTCERALSGGASFQEHLAQGASEDSRLGQTKNQEGSLEIQEGHLRPEIEPQKEKLPGNPGSDHSSLGTAVSVCSRGVQEASAGGAVRDHDSGGSGKDPVIQEEENIFKCNDCGKVFNKKRLLARHERIHSGVKPYECTECGKTFSKSTYLLQHHMVHTGEKPYKCMECGKAFNRKSHLTQHQRIHSGEKPYKCNECGKAFTHRSTFVLHNRSHTGEKPFVCKECGKAFRDRPGFIRHYIIHSGENPYECFECGKVFKHRSYLMWHQQTHTGEKPYECSECGKAFCESAALIHHYVIHTGEKPFECLECGKAFNHRSYLKRHQRIHTGEKPYVCSECGKAFTHCSTFILHKRAHTGEKPFECKECGKAFSNRADLIRHFSIHTGEKPYECTECGKAFNRRSGLTRHQRIHSGEKPYECLECGKTFCWSTNLIRHSIIHTGEKPYECSECGKAFSRSSSLTQHQRVHTGRNPVSVTDVGRPFPSGQTSVNLQELLLGKDFLNVTTAENLLPEETSYSESDHSYQRETPQISSL", "length": 627, "header": "tr|A0A8W4FF26-1|A0A8W4FF26_PIG Isoform 1 of Zinc finger protein 805 OS=Sus scrofa OX=9823 GN=LOC110261311 PE=3 SV=1 CANONICAL=A0A8W4FF26-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FF26-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF26/entry#A0A8W4FF26-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCT00000106437.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077467.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077467.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FF26", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF26" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110261311", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261311", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FF26", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF26" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FF26", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF26" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific 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"MGTLSCDPSPRLTTVPLGRRATECQIPETGLRRACGLATSESGSGPGLYVLPSTVGYINHDCTRVAGPAYSLFRRPSEASPQETSPGPIYFLDPKVTRFGRSCTPAYSMQGRGKSRGLEVTPGPGAYSPEKVAPVRQRTPPAFTLGSRLRPQPLDTSAPAPNTYTLPSLWGSQIFIKPSSPSYTVAGRTPATRRLLDPAEMPGPGQYESPDPNTYRQRRPAFTMLGRPRAPRPAEETPGPGTHSPEQVTVTKARAPAFTMGIRHSKRATTMAVDTTP", "length": 277, "header": "tr|A0A8W4FF28-1|A0A8W4FF28_PIG Isoform 1 of CIMAP1 family member D OS=Sus scrofa OX=9823 GN=CIMAP1D PE=4 SV=1 CANONICAL=A0A8W4FF28-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FF28-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF28/entry#A0A8W4FF28-1", "sequence": { "sequence": "MGTLSCDPSPRLTTVPLGRRATECQIPETGLRRACGLATSESGSGPGLYVLPSTVGYINHDCTRVAGPAYSLFRRPSEASPQETSPGPIYFLDPKVTRFGRSCTPAYSMQGRGKSRGLEVTPGPGAYSPEKVAPVRQRTPPAFTLGSRLRPQPLDTSAPAPNTYTLPSLWGSQIFIKPSSPSYTVAGRTPATRRLLDPAEMPGPGQYESPDPNTYRQRRPAFTMLGRPRAPRPAEETPGPGTHSPEQVTVTKARAPAFTMGIRHSKRATTMAVDTTP", "length": 277, "header": "tr|A0A8W4FF28-1|A0A8W4FF28_PIG Isoform 1 of CIMAP1 family member D OS=Sus scrofa OX=9823 GN=CIMAP1D PE=4 SV=1 CANONICAL=A0A8W4FF28-1" }, "locus": { "chromosome": "2", "start_pos": 77809693, "end_pos": 77804685, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102243.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102243.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076916.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076916.1" } ] } }, { "isoform_ac": "A0A8W4FK62-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF28/entry#A0A8W4FK62-1", "sequence": { "sequence": "MGTLSCDPSPRLTTVPLGRRATECQIPETGLRRACGLATSESASPQETSPGPIYFLDPKVTRFGRSCTPAYSMQGRGKSRGLEVTPGPGAYSPEKVAPVRQRTPPAFTLGSRLRPQPLDTSAPAPNTYTLPSLWGSQIFIKPSSPSYTVAGRTPATRRLLDPAEMPGPGQYESPDPNTYRQRRPAFTMLGRPRAPRPAEETPGPGTHSPEQVTVTKARAPAFTMGIRHSKRATTMAVDTTP", "length": 241, "header": "tr|A0A8W4FK62-1|A0A8W4FK62_PIG Computationally mapped isoform of CIMAP1 family member D OS=Sus scrofa OX=9823 GN=CIMAP1D PE=4 SV=1 CANONICAL=A0A8W4FF28-1" }, "locus": { "chromosome": "2", "start_pos": 77809693, "end_pos": 77804685, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092222.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092222.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079286.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079286.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 121, "start_aa": "Thr", "end_pos": 121, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr121", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FF28", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF28" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D3ZJC1-1", "protein_name": "CIMAP1 family member D", "gene_name": "Cimap1d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLSCDPVARPATVPLARRVADGHIPETGLRKSCGVATLENGSGPGLYVLPSTVGYVNHDCTKAASPAYSLARRPSEAPLQDSSPGPVYFLDPKVTRFGRSCPPAYSMQGRGKIRGLEVTPGPGAYSPEKTPPIRQRNAPAFTLGSRLRQKPPDTSAPAPNAYTMPPLWGSQIFIKPSSPSYTVVGRTPPARPPQDPSETPGPGQYESPDPNTYRQRRPAFSILGRPRTPRPPEDTPGPGTHNPEQVTVNRARAPAYTMGIRHSKRASTMVGDTKC", "length": 277 }, "evidence": [ { "id": "A0A8W4FF28", "url": "https://omabrowser.org/oma/group/A0A8W4FF28/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MQU9-1", "protein_name": "CIMAP1 family member D", "gene_name": "CIMAP1D", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGTLTCDPAPRLTPAPLGRRATDCQIPETSLRRTCGVATLEHGSGPGLYALPSTVGYINHDCTRVAGPAYSLFRRPIEASPQETSPGPVYFLDSKVTRFGRSCTPAYSMQGRGKSPGLEVTPGPGAYSPEKVAPMRQRTPPAFTLGSRLRPRPLNTSAPAPNTYTLPSLWGSQVFTKPSSPSYTVAGRTPPARPLQDPAEIPGPGQYDSPDPNAYRQRRPAFTMLGRPRAPRPPDETPGPGSHSPEQVTVTKARAPAFTMGIRHSKRATTMAADTAP", "length": 277 }, "evidence": [ { "id": "A0A8W4FF28", "url": "https://omabrowser.org/oma/group/A0A8W4FF28/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HF32-1", "protein_name": "Outer dense fiber protein 3-like protein 2", "gene_name": "Odf3l2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGTLSCDSTTRLATVPLARRVAEGHIPETGLRKSCGIATLENGSGPGLYVLPSTIGYVNHDCTKAASPAYSLALRTSEAPLQDSSPGPVYFLDPKVTRFGRCCPPAYSMQGRGRIRGLEVTPGPGAYSPEKAPPVRQRNPPAFTLGSRLRQKPPDTSVPAPNAYTMPPLWGSQIFIKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDPNTYRQRRPAFSILGRPRTPRPLEETPGPGTHSPEQVTVNRARAPAYSMGIRHSKRASTMAGDTKC", "length": 277 }, "evidence": [ { "id": "A0A8W4FF28", "url": "https://omabrowser.org/oma/group/A0A8W4FF28/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3SX64-1", "protein_name": "Protein CIMAP1D", "gene_name": "CIMAP1D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENGSGPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPAGHRLPGRCC", "length": 289 }, "evidence": [ { "id": "A0A8W4FF28", "url": "https://omabrowser.org/oma/group/A0A8W4FF28/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q3TZ65-1", "protein_name": "Protein CIMAP1D", "gene_name": "Cimap1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGTLSCDPEARLTTVPLARRVADGHIPETGLRKSCGIATLENGSGPGLYVLPSTVGYVNHDCTKAASPAYSLARRPSEAPLQDSSPGPVYFLDPKVTRFGRSCPPAYSMQGRAKVRGLEVTPGPGAYSPEKAPPVRQRNAPAFTLGSRLRQKPPDTSVPAPNAYTMPPLWGSQIFIKPSSPSYTVVGRTPPARPPQDPSEIPGPGQYESPDPNTYRQRRPAFSILGRPRTPRPLEDTPGPGTHNPEQVTVNRARAPAYTMGIRHSKRASTMVGDTKC", "length": 277 }, "evidence": [ { "id": "A0A8W4FF28", "url": 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"url": "https://www.uniprot.org/uniprotkb/A0A286ZI01", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZI01-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXE5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXE5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXE5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B833", "url": "https://www.uniprot.org/uniprotkb/A0A287B833", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B833-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B833-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJD3", "url": "https://www.uniprot.org/uniprotkb/A0A287BJD3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJD3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJD3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1X6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1X6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1X6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1X6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RMZ0", "url": "https://www.uniprot.org/uniprotkb/F1RMZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RMZ0-1", "url": "https://www.uniprot.org/uniprotkb/F1RMZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGU8", "url": "https://www.uniprot.org/uniprotkb/I3LGU8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGU8-1", "url": "https://www.uniprot.org/uniprotkb/I3LGU8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRSAAAAPRGPAAAIEPRRFAAARWPGRRSLPRPARRGGRGGSGGAPRPYPSAAPPPPGPGPPPSGQRSPPSASDCFGSNGNGGGAARPGSRRLLGFGGPPRPFVVLLLPLARPGAPPAAPTSASSLGARASPPRSGVSSARPAPGCPRPACGPVYGPLTMSLKPQQQQQQQQQPTAANARKPGGSGGLLTSPAAAPSPTSSSVSSSSAAASSSSTVAAASAGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTSPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGVIPTDAVPMPLPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKSNETSPSFPKAESKGISPVVSEHRKQIDDLKKFKNDFRLQPSSASESVDQLLNKSREGEKSRDVIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEETKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNIPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCRGRRAPQSILLAQVKWQAGPALQAPHLRTSKTRQCAQ", "length": 1335, "header": "tr|A0A286ZI01-1|A0A286ZI01_PIG Isoform 1 of Ataxin 2 OS=Sus scrofa OX=9823 GN=ATXN2 PE=1 SV=2 CANONICAL=A0A286ZI01-1" }, "isoforms": [ { "isoform_ac": "A0A286ZI01-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01/entry#A0A286ZI01-1", "sequence": { "sequence": "MRSAAAAPRGPAAAIEPRRFAAARWPGRRSLPRPARRGGRGGSGGAPRPYPSAAPPPPGPGPPPSGQRSPPSASDCFGSNGNGGGAARPGSRRLLGFGGPPRPFVVLLLPLARPGAPPAAPTSASSLGARASPPRSGVSSARPAPGCPRPACGPVYGPLTMSLKPQQQQQQQQQPTAANARKPGGSGGLLTSPAAAPSPTSSSVSSSSAAASSSSTVAAASAGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTSPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGVIPTDAVPMPLPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKSNETSPSFPKAESKGISPVVSEHRKQIDDLKKFKNDFRLQPSSASESVDQLLNKSREGEKSRDVIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEETKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNIPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCRGRRAPQSILLAQVKWQAGPALQAPHLRTSKTRQCAQ", "length": 1335, "header": "tr|A0A286ZI01-1|A0A286ZI01_PIG Isoform 1 of Ataxin 2 OS=Sus scrofa OX=9823 GN=ATXN2 PE=1 SV=2 CANONICAL=A0A286ZI01-1" }, "locus": { "chromosome": "14", "start_pos": 32771515, "end_pos": 32666456, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041394.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041394.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031182.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031182.2" } ] } }, { "isoform_ac": "A0A286ZXE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01/entry#A0A286ZXE5-1", "sequence": { "sequence": "MRSAAAAPRGPAAAIEPRRFAAARWPGRRSLPRPARRGGRGGSGGAPRPYPSAAPPPPGPGPPPSGQRSPPSASDCFGSNGNGGGAARPGSRRLLGFGGPPRPFVVLLLPLARPGAPPAAPTSASSLGARASPPRSGVSSARPAPGCPRPACGPVYGPLTMSLKPQQQQQQQQQPTAANARKPGGSGGLLTSPAAAPSPTSSSVSSSSAAASSSSTVAAASAGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTSPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGVIPTDAVPMPLPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKSNETSPSFPKAESKGISPVVSEHRKQIDDLKKFKNDFRLQPSSASESVDQLLNKSREGEKSRDVIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEETKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNIPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYVSTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCRGRRAPQSILLAQVKWQAGPALQAPHLRTSKTRQCAQ", "length": 1317, "header": "tr|A0A286ZXE5-1|A0A286ZXE5_PIG Computationally mapped isoform of Ataxin 2 OS=Sus scrofa OX=9823 GN=ATXN2 PE=1 SV=2 CANONICAL=A0A286ZI01-1" }, "locus": { "chromosome": "14", "start_pos": 32771515, "end_pos": 32666456, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063654.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063654.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036290.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036290.2" } ] } }, { "isoform_ac": "A0A287B833-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01/entry#A0A287B833-1", "sequence": { "sequence": "MQNTSEIRPALQGKTDTPSPKGRPASRRADPGRAGSRALARPPRKRPSAAPAPHVSLPAPGPPHVLLPSDPSDFRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTSPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGVIPTDAVPMPLPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKSNETSPSFPKAESKGISPVVSEHRKQIDDLKKFKNDFRLQPSSASESVDQLLNKSREGEKSRDVIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEETKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAVPNIPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCRGRRAPQSILLAQVKWQAGPALQAPHLRTSKTRQCAQ", "length": 1177, "header": "tr|A0A287B833-1|A0A287B833_PIG Computationally mapped isoform of Ataxin 2 OS=Sus scrofa OX=9823 GN=ATXN2 PE=1 SV=1 CANONICAL=A0A286ZI01-1" }, "locus": { "chromosome": "14", "start_pos": 32771813, "end_pos": 32666456, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041356.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041356.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052268.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052268.1" } ] } }, { "isoform_ac": "A0A287BJD3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01/entry#A0A287BJD3-1", "sequence": { "sequence": "MRSAAAAPRGPAAAIEPRRFAAARWPGRRSLPRPARRGGRGGSGGAPRPYPSAAPPPPGPGPPPSGQRSPPSASDCFGSNGNGGGAARPGSRRLLGFGGPPRPFVVLLLPLARPGAPPAAPTSASSLGARASPPRSGVSSARPAPGCPRPACGPVYGPLTMSLKPQQQQQQQQQPTAANARKPGGSGGLLTSPAAAPSPTSSSVSSSSAAASSSSTVAAASAGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTSPSEAAAPPAARTSPAGGTWSSVVSGAKDSRLQDQRQNSPAGNKENMKSNETSPSFPKAESKGISPVVSEHRKQIDDLKKFKNDFRLQPSSASESVDQLLNKSREGEKSRDVIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEETKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAVPNIPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL", "length": 1233, "header": "tr|A0A287BJD3-1|A0A287BJD3_PIG Computationally mapped isoform of Ataxin 2 OS=Sus scrofa OX=9823 GN=ATXN2 PE=1 SV=3 CANONICAL=A0A286ZI01-1" }, "locus": { "chromosome": "14", "start_pos": 32771515, "end_pos": 32665709, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052661.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052661.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056267.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056267.3" } ] } }, { "isoform_ac": "A0A5G2R1X6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01/entry#A0A5G2R1X6-1", "sequence": { "sequence": "MQNTSEIRPALQGKTDTPSPKGRPASRRADPGRAGSRALARPPRKRPSAAPAPHVSLPAPGPPHVLVPIPHLRISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTSPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGVIPTDAVPMPLPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKSNETSPSFPKAESKGISPVVSEHRKQIDDLKKFKNDFRLQPSSASESVDQLLNKSREGEKSRDVIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEETKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAVPNIPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCRGRRAPQSILLAQVKWQAGPALQAPHLRTSKTRQCAQ", "length": 1163, "header": "tr|A0A5G2R1X6-1|A0A286ZI01_PIG Computationally mapped isoform of Ataxin 2 OS=Sus scrofa OX=9823 GN=ATXN2 PE=1 SV=1 CANONICAL=A0A286ZI01-1" }, "locus": { "chromosome": "14", "start_pos": 32771813, "end_pos": 32666456, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087194.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087194.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064533.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064533.1" } ] } }, { "isoform_ac": "F1RMZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01/entry#F1RMZ0-1", "sequence": { "sequence": "MRSAAAAPRGPAAAIEPRRFAAARWPGRRSLPRPARRGGRGGSGGAPRPYPSAAPPPPGPGPPPSGQRSPPSASDCFGSNGNGGGAARPGSRRLLGFGGPPRPFVVLLLPLARPGAPPAAPTSASSLGARASPPRSGVSSARPAPGCPRPACGPVYGPLTMSLKPQQQQQQQQQPTAANARKPGGSGGLLTSPAAAPSPTSSSVSSSSAAASSSSTVAAASAGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTSPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGVIPTDAVPMPLPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKSNETSPSFPKAESKGISPVVSEHRKQIDDLKKFKNDFRLQPSSASESVDQLLNKSREGEKSRDVIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEETKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNIPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQTHKSGKEDGISQILNSEAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL", "length": 1318, "header": "tr|F1RMZ0-1|F1RMZ0_PIG Computationally mapped isoform of Ataxin 2 OS=Sus scrofa OX=9823 GN=ATXN2 PE=1 SV=4 CANONICAL=A0A286ZI01-1" }, "locus": { "chromosome": "14", "start_pos": 32771515, "end_pos": 32665709, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010778.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010778.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010498.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010498.4" } ] } }, { "isoform_ac": "I3LGU8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI01/entry#I3LGU8-1", "sequence": { "sequence": 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"database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 122, "start_aa": "Thr", "end_pos": 122, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr122", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 200, "start_aa": "Thr", "end_pos": 200, "end_aa": "Thr", "residue": "Thr", "site_lbl": 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"MGMRIKLQSTNHPNNLLKELNKCRLSETMCDVTIVVGSRSFPAHKAVLACAKILSFVYTSELFTDLINVGVIYEVAERLGMEDLLRACHSTFPDLESTAVAKPLTSTSESHSGTLSCNSAEPVPPLGELRGGGEHFGPDRNCVLPGDAGGSYKEDERNVTSDTNHSLPLPQQPLPPKTEDHDAPAPFTSVPSMVTQPVLGTVSMGIQTSTSSCQPYKVQSNGDFSKNSFFSPDNAIDITTGTNSCLSNSDHSKDPSFGQMDELQLEDLGDDDLQFEDPTEEIGTAEEVIELSDDSEDELTFGENDNRENKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVLSHIGIFLFSCDMCETKFFTQWQLTLHRRDGIFENNIIVHPNDPLPGKLGLFSGAASAELKCAACGKALAKDFHVVRGHILDHLNLKGQACSVCDQRHLNLCSLMWHTLSHLGISVFSCSVCANSFVDWHLLEKHMAVHQSLEDTLFRCHLCSQSFKSEAAYRYHVSQHKCNSGLDARPGFGLQHPALQKRKLPAEEFLSEELALQGQPGNSKYSCKVCGKRFAHTSEFNYHRRIHTGEKPYQCKVCHKFFRGRSTIKCHLKTHSGALMYRCTVCGHYSSTLNLMSKHVGVHKGSLPPDFTIEQTFMYIIHSKEAEKNPES", "length": 681, "header": "tr|A0A286ZI78-1|A0A286ZI78_PIG Isoform 1 of Zinc finger and BTB domain containing 39 OS=Sus scrofa OX=9823 GN=ZBTB39 PE=3 SV=2 CANONICAL=A0A286ZI78-1" }, "isoforms": [ { "isoform_ac": "A0A286ZI78-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI78/entry#A0A286ZI78-1", "sequence": { "sequence": "MGMRIKLQSTNHPNNLLKELNKCRLSETMCDVTIVVGSRSFPAHKAVLACAKILSFVYTSELFTDLINVGVIYEVAERLGMEDLLRACHSTFPDLESTAVAKPLTSTSESHSGTLSCNSAEPVPPLGELRGGGEHFGPDRNCVLPGDAGGSYKEDERNVTSDTNHSLPLPQQPLPPKTEDHDAPAPFTSVPSMVTQPVLGTVSMGIQTSTSSCQPYKVQSNGDFSKNSFFSPDNAIDITTGTNSCLSNSDHSKDPSFGQMDELQLEDLGDDDLQFEDPTEEIGTAEEVIELSDDSEDELTFGENDNRENKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVLSHIGIFLFSCDMCETKFFTQWQLTLHRRDGIFENNIIVHPNDPLPGKLGLFSGAASAELKCAACGKALAKDFHVVRGHILDHLNLKGQACSVCDQRHLNLCSLMWHTLSHLGISVFSCSVCANSFVDWHLLEKHMAVHQSLEDTLFRCHLCSQSFKSEAAYRYHVSQHKCNSGLDARPGFGLQHPALQKRKLPAEEFLSEELALQGQPGNSKYSCKVCGKRFAHTSEFNYHRRIHTGEKPYQCKVCHKFFRGRSTIKCHLKTHSGALMYRCTVCGHYSSTLNLMSKHVGVHKGSLPPDFTIEQTFMYIIHSKEAEKNPES", "length": 681, "header": "tr|A0A286ZI78-1|A0A286ZI78_PIG Isoform 1 of Zinc finger and BTB domain containing 39 OS=Sus scrofa OX=9823 GN=ZBTB39 PE=3 SV=2 CANONICAL=A0A286ZI78-1" }, "locus": { "chromosome": "5", "start_pos": 22314655, "end_pos": 22312524, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065820.2", "url": "https://www.ensembl.org/id/ENSSSCT00000065820.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031268.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031268.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZI78", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI78" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZI78", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI78" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZI78", "url": "https://www.uniprot.org/uniprotkb/A0A286ZI78" } ], "pmid": "" }, { "name": "regulation of immune system process", "id": "GO:0002682", "url": 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"A0A287BBI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBI9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR86", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR86-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR86-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RFD0", "url": "https://www.uniprot.org/uniprotkb/F1RFD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RFD0-1", "url": "https://www.uniprot.org/uniprotkb/F1RFD0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA28", "url": "https://www.uniprot.org/uniprotkb/I3LA28", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA28-1", "url": "https://www.uniprot.org/uniprotkb/I3LA28-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGRVGDLSPKQKEALAKFRENVQDVLPTLPNPDDHFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNILNWQPPEVIQQYLSGGLCGYDLDGCPVWYDVIGPLDAKGLLLSATKQDLLRTKMRDCELIQRECACQTEKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKASEEKMKQLGEATPK", "length": 403, "header": "tr|A0A286ZRQ5-1|A0A286ZRQ5_PIG Isoform 1 of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=1 CANONICAL=A0A286ZRQ5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIF2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5/entry#A0A286ZIF2-1", "sequence": { "sequence": "MSGRVGDLSPKQKEALAKFRENVQDVLPTLPNPDDHFLLRWLRARSFDLQKSEAMLRKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKASEEKMKQLGEATPK", "length": 320, "header": "tr|A0A286ZIF2-1|A0A286ZRQ5_PIG Computationally mapped isoform of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=2 CANONICAL=A0A286ZRQ5-1" }, "locus": { "chromosome": "14", "start_pos": 47389884, "end_pos": 47370161, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048943.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048943.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031261.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031261.2" } ] } }, { "isoform_ac": "A0A286ZRQ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5/entry#A0A286ZRQ5-1", "sequence": { "sequence": "MSGRVGDLSPKQKEALAKFRENVQDVLPTLPNPDDHFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNILNWQPPEVIQQYLSGGLCGYDLDGCPVWYDVIGPLDAKGLLLSATKQDLLRTKMRDCELIQRECACQTEKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKASEEKMKQLGEATPK", "length": 403, "header": "tr|A0A286ZRQ5-1|A0A286ZRQ5_PIG Isoform 1 of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=1 CANONICAL=A0A286ZRQ5-1" }, "locus": { "chromosome": "14", "start_pos": 47389884, "end_pos": 47370161, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054363.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054363.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034144.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034144.1" } ] } }, { "isoform_ac": "A0A287AT58-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5/entry#A0A287AT58-1", "sequence": { "sequence": "MSGRVGDLSPKQKEALAKFRENVQDVLPTLPNPDDHFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNILNWQPPEVIQQYLSGGLCGYDLDGCPVWYDVIGPLDAKGLLLSATKQDLLRTKMRDCELIQRECACQTEKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGIYVLRFDNTYSFIHAKKVSFTVEAWLPQCLLVSFYPLQQSFSQHSHAQRETGLEKRPQGWIWEAFISELGRGRVAGVALFASQITKESPRAGHM", "length": 453, "header": "tr|A0A287AT58-1|A0A287AT58_PIG Computationally mapped isoform of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=2 CANONICAL=A0A286ZRQ5-1" }, "locus": { "chromosome": "14", "start_pos": 47390118, "end_pos": 47370161, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052757.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052757.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047139.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047139.2" } ] } }, { "isoform_ac": "A0A287BBI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5/entry#A0A287BBI9-1", "sequence": { "sequence": "VLAQVIQQYLSGGLCGYDLDGCPVWYDVIGPLDAKGLLLSATKQDLLRTKMRDCELIQRECACQTEKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGICK", "length": 288, "header": "tr|A0A287BBI9-1|A0A287BBI9_PIG Computationally mapped isoform of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=2 CANONICAL=A0A286ZRQ5-1" }, "locus": { "chromosome": "14", "start_pos": 47384175, "end_pos": 47377986, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040925.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040925.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053481.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053481.2" } ] } }, { "isoform_ac": "A0A5G2QR86-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5/entry#A0A5G2QR86-1", "sequence": { "sequence": "MSGRVGDLSPKQKEALAKFRENVQDVLPTLPNPDDHFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNILNWQPPEVIQQYLSGGLCGYDLDGCPVWYDVIGPLDAKGLLLSATKQDLLRTKMRDCELIQRECACQTEKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGIWPHLRHMGVPRLEVESELQLLAYATATATWDPRHIGDLHHSSRQHRILNPLSEARDRTYILMDPSRAR", "length": 428, "header": "tr|A0A5G2QR86-1|A0A286ZRQ5_PIG Computationally mapped isoform of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=1 CANONICAL=A0A286ZRQ5-1" }, "locus": { "chromosome": "14", "start_pos": 47386050, "end_pos": 47370161, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090321.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090321.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067432.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067432.1" } ] } }, { "isoform_ac": "F1RFD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5/entry#F1RFD0-1", "sequence": { "sequence": "DHFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNILNWQPPEVIQQYLSGGLCGYDLDGCPVWYDVIGPLDAKGLLLSATKQDLLRTKMRDCELIQRECACQTEKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKASEEKMKQLGEATPK", "length": 369, "header": "tr|F1RFD0-1|F1RFD0_PIG Computationally mapped isoform of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=3 CANONICAL=A0A286ZRQ5-1" }, "locus": { "chromosome": "14", "start_pos": 47389884, "end_pos": 47372636, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010963.5", "url": "https://www.ensembl.org/id/ENSSSCT00000010963.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010677.3", "url": "https://www.ensembl.org/id/ENSSSCP00000010677.3" } ] } }, { "isoform_ac": "I3LA28-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5/entry#I3LA28-1", "sequence": { "sequence": "MSGRVGDLSPKQKEALAKFRENVQDVLPTLPNPDDHFLLRWLRARSFDLQKSEAMLRKVIQQYLSGGLCGYDLDGCPVWYDVIGPLDAKGLLLSATKQDLLRTKMRDCELIQRECACQTEKTGKKIETVTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKINVLGANWKEVLLKYISPDQVPVEYGGTMTDPDGDPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKMGERQRAGEMTEVLASQRYNAHLVPEDGTLTCSNPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKASEEKMKQLGEATPK", "length": 383, "header": "tr|I3LA28-1|A0A286ZRQ5_PIG Computationally mapped isoform of SEC14 like lipid binding 2 OS=Sus scrofa OX=9823 GN=SEC14L2 PE=1 SV=3 CANONICAL=A0A286ZRQ5-1" }, "locus": { "chromosome": "14", "start_pos": 47389884, "end_pos": 47370161, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026986.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026986.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020894.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020894.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QR86", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR86" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7EZC8-1", "protein_name": "Coiled-coil domain-containing protein 157 isoform X1", "gene_name": "Ccdc157", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGRWRRPREKPRKLVNTLPVTPPGRGALPTPPRGQGGALLRCHGSSLGAPLRVSRDHRSHWRSGGSSVSRPDTELRLRRRRQGWEGRLRPALYLNQESKSQKARHLHEPQISVLSPIGGHSRSLHLHGQTSVRAPGVVGMAHLLGSQACMDSLRKDLTDLQGTIVDVFSRAGPVRFPSWKFPDRVACDLDMVALLEHYDHVPGDPEFTQLSHAVLLELVIDRLLLLLQSCASYLENLSLEQMMPPTRAPGPCMSVGLTVRRFWSNLLRLGMLYQQAAPQKRANQGEIPIAKPTAKGEPSRSPECMTAKFIKPPSPVPGLPLICPGLQSIPVRVSIRGPPGTSEKTKSVYSQTIETALVPCDACTSVQGSLWEVGKVVISLCQSQNLPSSLGQFQKLVQDSMGLKPLPAATMSHWAAEQSKDLTRLNKHVGALTQLVGPLRAQLEDAEGQKDELRKQVDKLEQALRQEKGERQRQAEEAERSLAKCEHDRQQLLTETCDLKTKVATLEGDLKQQQKSMQATVAKAQQLEEEGERRAAAERQVQQLEEQVQLLAGRLDGAGQQIRWASTELDKEKARVDSMVRHQESLQAKQRTLLQQLDSLDQEREELRGSLDEAEARRAELEEQLQSLQNDREQGQCQIQAQQELLHSLHQEKQDLEQVTTDLQLTISELHLELEDLKERERLLVTFPDLHQHMEAQIQSSGNVTHDMEKQVQANDIRIQVLQEDNRRLQSMLTKIREVAQQGGLKMIPQGQLWSLPYKDTQGEVPPAQAQNTSPGPMGRRQSPVSRTSSTGRTPSGGPRASPPRQPWPSKSSLEDRTYSATCTQNPMRALARLRRKLSPNRGQAGSPYQPQERPT", "length": 856 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9SFN1-1", "protein_name": "SEC14 like lipid binding 2", "gene_name": "SEC14L2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSGRVGDLSPKQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARNFNLQKSEAMLRKHVEFRKQKDIDNIMSWQPPEVVQQYLSGGMCGYDLEGSPIWYDIIGPLDAKGLLLSASKQDLFKTKMRDCELLLQECVRQTEKMGKKIEATTLIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFIVKAPKLFPVAYNLVKPFLSEDTRKKIQVLGANWKEVLLKYISPDQLPVEYGGTMTDPDGNPKCKSKINYGGDIPKKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGSDIGFGIFLKTKVGERQRAGEMREVLPSQRYNAHLVPEDGSLTCSDPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKASEEKMQQLGAVTPK", "length": 403 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A2BIR0-1", "protein_name": "SEC14-like lipid binding 8", "gene_name": "sec14l8", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSGRVGDLSVKQAEALAQFREKVQDVLPQCPSQSDHFLLRWLRARNFNLQKSEAMLRKHIEFRKHMKVDTITTEWQVPEVIDKYLSGGMCGHDREGSPVWYDVIGPLDPKGLMHSASKQDLIKSKVRDCEILQKDCDRQSERLGRNIESITMVYDCEGLGMKHLYKPAIETYGEVLTMFEDNYPEGLKRLFVIKAPKLFPVAYNLVKHFLSEDTRRKVIVLGSNWQEVLQKYIDPEELPAYYGGKLTDPDGDPKCRTRITFGSEIPKSYYVRDSIKVDYEQSVSIGRGSSHQMEYELIAPNCALRWQFSCDGADIGFGVYLKKKMGERMKAGEMREIVPNQRYNAHLVPEDGSLTCPEPGVYVLRFDNTYSVFQSKTVKFTVEVLLPSQVNQSDN", "length": 395 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O76054-1", "protein_name": "SEC14-like protein 2", "gene_name": "SEC14L2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSGRVGDLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKMKQLGAGTPK", "length": 403 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q55CK3-1", "protein_name": "Cellular retinaldehyde-binding/triple function domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSGFIKDLSQPQSEALNQFKEYLNKKETIVQIKSDIKNKLPTTTTTTTTTNTETEESSSSSSPSSKEEEKHLKIWNINLENDSKERDIILLKFLRAREFKIENSKQMLIDCLIWRKQNQVDDYEKIVNEAFPDYYKNIGTIFKTDKEGRPVMINHYHAINPDVIFKDGVDQFVRWKVQQMEIAIRDTLIPSQWEIEDLIVIHDYKDCSFFRMDPRIKQASNQTIQTLQNNYPEFLARKFFINIPWLMEKLFSIFTVFTSERTKSKFIICSGNYREKLLKYIEADSIAPKLSGFEDNQSPILNIKIKPQKSHSIQLGKLDADKTIEWEFCTNEIDSEIGAKILIEPNNQPTTSNDILYFNNNSNNNNNNNNSPTPSNSNYPFNCFLSIEPREFNSGSIQIEDDSYYTLVFNNHLNKQCDLFYRITIKSKTTHSSTTTSTIETLGN", "length": 444 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q99J08-1", "protein_name": "SEC14-like protein 2", "gene_name": "Sec14l2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGRVGDLSPKQEEALAKFRENVQDVLPTLPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDKIISWQPPEVIQQYLSGGRCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRDCELLLQECIQQTTKLGKKIETITMIYDCEGLGLKHLWKPAVEAYGEFLTMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRRKIMVLGANWKEVLLKHISPDQLPVEYGGTMTDPDGNPKCKSKINYGGDIPKQYYVRDQVKQQYEHTVQVSRGSSHQVEYEILFPGCVLRWQFMSEGSDVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHMVPEDGTLTCSEPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKAAEEKMNQQGADTPK", "length": 403 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q99MS0-1", "protein_name": "SEC14-like protein 2", "gene_name": "Sec14l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGRVGDLSPKQEEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDKIISWQPPEVIQQYLSGGRCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRDCELLLQECTQQTAKLGKKIETITMIYDCEGLGLKHLWKPAVEAYGEFLTMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQLPVEYGGTMTDPDGNPKCKSKINYGGDIPKQYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSEGSDVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHMVPEDGTLTCSEPGIYVLRFDNTYSFIHAKKVSFTVEVLLPDKAAEEKLNQQGAVTPK", "length": 403 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9SCU1-1", "protein_name": "Patellin-6", "gene_name": "PATL6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDASLSPFDHQKTQNTEPKKSFITSLITLRSNNIKEDTYFVSELKPTEQKSLQELKEKLSASSSKASSMWGVSLLGGDDKADVILLKFLRARDFKVADSLRMLEKCLEWREEFKAEKLTEEDLGFKDLEGKVAYMRGYDKEGHPVCYNAYGVFKEKEMYERVFGDEEKLNKFLRWRVQVLERGVKMLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPELVATKIFINVPWYFSVIYSMFSPFLTQRTKSKFVMSKEGNAAETLYKFIRPEDIPVQYGGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDEAVCNSFTTVEAGKLILSVDNTLSRKKKVAAYRYTVRKSTTTV", "length": 409 }, "evidence": [ { "id": "A0A286ZRQ5", "url": "https://omabrowser.org/oma/group/A0A286ZRQ5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRQ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRQ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRQ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRQ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZRQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5" }, { "id": "PS50191", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50191" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CRAL-TRIO", "eco_id": "ECO_0000259", "start_pos": 76, "end_pos": 249, "start_aa": "Pro", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZRQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRQ5" }, { "id": "PS50866", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50866" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GOLD", "eco_id": "ECO_0000259", "start_pos": 275, "end_pos": 383, "start_aa": "Lys", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZIG7-1", "uniprot_ac": "A0A286ZIG7", "uniprot_id": "A0A286ZIG7_PIG", "mass": { "chemical_mass": 63924.0, "monoisotopic_mass": 63924.0 }, "refseq": { "ac": "XP_020932159", "name": "kelch-like protein 23", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932159" }, "gene_names": [ { "name": "KLHL23", "type": "recommended", "evidence": [ { "id": "A0A286ZIG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" } ] }, { "name": "KLHL23", "type": "synonym", "evidence": [ { "id": "XP_020932159", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932159" } ] } ], "protein_names": [ { "name": "Kelch like family member 23", "type": "synonym", "evidence": [ { "id": "A0A286ZIG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7/entry#names_and_taxonomy" } ] }, { "name": "kelch-like protein 23", "type": "synonym", "evidence": [ { "id": "XP_020932159", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932159" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLHL23", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7", "locus": { "chromosome": "15", "start_pos": 76051673, "end_pos": 76029563, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015937", "url": "https://www.ensembl.org/id/ENSSSCG00000015937" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015937", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015937", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18252", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18252", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18462", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18462", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520221", "url": "https://www.ncbi.nlm.nih.gov/gene/100520221", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047068", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047068", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520221", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520221", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HIWDPIS", "url": "https://omabrowser.org/oma/group/HIWDPIS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZIG7", "url": "https://www.orthodb.org/?gene=A0A286ZIG7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412:SF304", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412:SF304", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24681", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24681", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020932159", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932159", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZIG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALKGQEDYIYLFKDSAHPVDFLDAFRTFYLDGLFTDITLQCPSGIIFHCHRAVLAACSNYFKAMFTADMKEKFKNKIKISGIHHDILEGLVNYAYTSQIEITKRNVQSLLEAADLLQFLSVKKACEQFLVRHLDIDNCIGMHSFAEFHMCTELEKESRRILCSRFKEVWQQEEFLEISLEKFLFILSRKNLSVWKDEAIIEPVIKWTAHDVENRIECLYNLLSYVNIDIDPVYLKTALGLHRSCLLTENKIRSLIYNALNPMHKEISQRSTATMYIIGGYYWHPLSEVHIWDPLTNVWIQGAEIPDYTRESYGVTCLGPNIYVTGGYRTDNIEALDTVWIYNSESDEWTEGLPMLNARYYHCAVTLGGCVYALGGYRKGAPAEEAEFYDPLKEKWIPIANMIKGVGNATACVLHEVIYVIGGHCGYRGSCTYDKVQSYNSDINEWSLITSSPHPEYGLCSVPFENKLYLVGGQTTITECYDPEQNEWREIAPMMERRMECGAVIMNGCIYVTGGYSYSKGTYLQSIEKYDPDLNKWEIVGNLPSAMRSHGCVCVYNV", "length": 558, "header": "tr|A0A286ZIG7-1|A0A286ZIG7_PIG Isoform 1 of Kelch like family member 23 OS=Sus scrofa OX=9823 GN=KLHL23 PE=4 SV=1 CANONICAL=A0A286ZIG7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7/entry#A0A286ZIG7-1", "sequence": { "sequence": "MALKGQEDYIYLFKDSAHPVDFLDAFRTFYLDGLFTDITLQCPSGIIFHCHRAVLAACSNYFKAMFTADMKEKFKNKIKISGIHHDILEGLVNYAYTSQIEITKRNVQSLLEAADLLQFLSVKKACEQFLVRHLDIDNCIGMHSFAEFHMCTELEKESRRILCSRFKEVWQQEEFLEISLEKFLFILSRKNLSVWKDEAIIEPVIKWTAHDVENRIECLYNLLSYVNIDIDPVYLKTALGLHRSCLLTENKIRSLIYNALNPMHKEISQRSTATMYIIGGYYWHPLSEVHIWDPLTNVWIQGAEIPDYTRESYGVTCLGPNIYVTGGYRTDNIEALDTVWIYNSESDEWTEGLPMLNARYYHCAVTLGGCVYALGGYRKGAPAEEAEFYDPLKEKWIPIANMIKGVGNATACVLHEVIYVIGGHCGYRGSCTYDKVQSYNSDINEWSLITSSPHPEYGLCSVPFENKLYLVGGQTTITECYDPEQNEWREIAPMMERRMECGAVIMNGCIYVTGGYSYSKGTYLQSIEKYDPDLNKWEIVGNLPSAMRSHGCVCVYNV", "length": 558, "header": "tr|A0A286ZIG7-1|A0A286ZIG7_PIG Isoform 1 of Kelch like family member 23 OS=Sus scrofa OX=9823 GN=KLHL23 PE=4 SV=1 CANONICAL=A0A286ZIG7-1" }, "locus": { "chromosome": "15", "start_pos": 76049851, "end_pos": 76030759, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062516.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062516.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031236.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031236.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520221", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520221", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JW57-1", "protein_name": "Kelch-like family member 23", "gene_name": "Klhl23", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVRCGPAMALKGQEDYIYLFKDSSHPVDFLDAFRTFYMDGLFTDITLQCPSGIIFHCHRAVLAACSNYFKAMFTADMKEKFKSKIKLSGIHHDILEGLVNYAYTSQIEITKRNVQSLLEAADLLQFLSVKKACEQFLVRHLDIDNCIGMHSFAEFHVCSELEKESRRILCSRFKEVWQQEEFLEISLEKFLFILSRKNLSVWKEEAILEPVIKWTAHDVENRVECLYNLLSYVNIDIDPVYLKTALGLQRSCLLTENKIRSLIYNALNPMHKEISQRSTATMYIIGGYYWHPLSEVHIWDPLTNVWIQGAEIPDYTRESYGVTCLGPNIYVTGGYRTDNIDALDTVWIYNSEGDEWTEGLPMLNARYYHCAVTLGGCVYALGGYRKGAPAEEAEFYDPLKEKWLPIANMIKGVGNATACVLHEVIYVIGGHCGYRGSCTYDKVQSYNSDINEWSLITASPHPEYGLCSVPFENKLYLVGGQTTITECYDPEQNEWRETAPMMERRMECGAVIMNGCIYVTGGYSYSKGTYLQSIEKYDPDLNKWEIVGNLPSAMRSHGCVCVYNV", "length": 566 }, "evidence": [ { "id": "A0A286ZIG7", "url": "https://omabrowser.org/oma/group/A0A286ZIG7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZNI2-1", "protein_name": "Kelch like family member 23", "gene_name": "KLHL23", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALPGQEDYEFAYRDSSHPVCLLDAFRAFYLDGLFTDIALQAASGVLLHCHRAVLAACSSYFRAMFTADMKEKSKNQIRLPELSHAVLEALVNYAYTSQIQITKRNVQSLLQAADLLQFVSVKRACEQFLIRHLDADNCLGMHAFAEHHNCLELEKESRRMLLWQFEEVWKQEEFLDVSKEKLAFILSRENLNVWKEEAAVGAVVRWVAHNVEERIEDIYELLSCIKLDLDNVYLRSALSLQKKCRLNDNKIRSLVYSALNPSPKGLSKRPTATMCVVGGYYWHPLSEVHVWDPLTNAWLQGAEMPDHTRESYGVTSLGPDIYVTGGYRTESIEALDTVWIYNSERDEWAEGCPMLDARYYHCAVSLSGCVYALGGYRKGAPVQEAEFYDPLKKKWVPIANMIKGVGNATACVLHEVIFVTGGHYGYRGSCTYDKIQRYHSGSNEWSIVTTSPHPEYGLCSITLQNKIYFVGGQTTITDCYDPEQDEWKQMAHMLERRMECGAVVMNGCIYVTGGYSYSKGTYLQSIEKYNPELNTWEAVGNLPSAMRSHGCVCVYNV", "length": 558 }, "evidence": [ { "id": "A0A286ZIG7", "url": "https://omabrowser.org/oma/group/A0A286ZIG7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7FED5-1", "protein_name": "Kelch-like protein 23 isoform X2", "gene_name": "klhl23", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSGNAQSGYSYDFYDASHPSEVLEALHEFHNSGLFTDIALQSSSGQLFHCHKAVLSARSSYFKVMFTLDMRERANDTINLPCVDGEILGALVTYVYTAKIGITQNNVQRLLEAADLLQFNSLKKACENFLIRLLDVDNCLGMHSFAELHVCSALERAALRIILSRFEDVTLQDEFPETGFQKLMAILSTENLNVWKDTTLLDAVVKWVVYDVASRIDHIQELLNCIHINVDDVYLKMALDLRKCCSESKLRSLILTSLKPSKGFSDCCKKPTCSLYVIGGYYWHPLCEVHMWDPVSNTWVQGKDMPDFARESYSVVLLGADIYVTGGYRTETVDALDNVWIYNTDSDEWTEGCPMITARYYHCSVALRGCVYVIGGYTAGAPTQETEFYDPLKKTWFPVAEMIQGVGNATACVVNDRVYVTGGHYGYRGTCTYEKIQTYRPDINEWSITTICPHPEYGLCSVSLYNKLYLVGGQTTITDCYDPERDEWRQMCAMKERRMECGSAVINGCIYVAGGYSYSKGTYLQSIERYDPEIDCWEIVGNLPSAARSHGCVCVFGV", "length": 558 }, "evidence": [ { "id": "A0A286ZIG7", "url": "https://omabrowser.org/oma/group/A0A286ZIG7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3GU91-1", "protein_name": "Kelch-like protein 23", "gene_name": "Klhl23", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALKGQEDYIYLFKDSSHPVDFLDAFRTFYLDGLFTDITLQCPSGIIFHCHRVVLAACSNYFKAMFTADMKEKFKSKIKLFGIHHDILEGLVNYAYTSQIEITKRNVQSLLEAADLLQFLSVKKACEQFLVRHLDIDNCIGMHSFAEFHVCSELEKESRRILCSRFKEVWQQEEFLEISLEKFLFILSRKNLNVWKEDAVIEPVIKWTAHDVENRIECLCNLLSYINIDIDPVYLKTALGLQRSCLLTENKIRSLIYNALNPMHKEISQRSTATMYIIGGYYWHPLSEVHIWDPLTNVWIQGAEIPDYTRESYGVTCLGPNIYVTGGYRTDNIDALDTVWIYNSEGDEWSEGLPMLNARYYHCAVTLGGCVYALGGYRKGAPAEEAEFYDPLKEKWLPIANMIKGVGNATACVLHEVIYVIGGHCGYRGSCTYDKVQSYNSDINEWSLITASPHPEYGLCSVPFENKLYLVGGQTTITECYDPEQNEWRETAPTMERRMECGAVIMNGCIYVTGGYSYSKGTYLQSIERYDPDLNKWEIVGNLPSAMRSHGCVCVYNV", "length": 558 }, "evidence": [ { "id": "A0A286ZIG7", "url": "https://omabrowser.org/oma/group/A0A286ZIG7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q6GQU2-1", "protein_name": "Kelch-like protein 23", "gene_name": "Klhl23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALKGQEDYIFHFKDSSHPVDFLDAFRTFYMDGLFTDITLQCPSGIIFHCHRAVLAACSNYFKAMFTADMKEKFKSKIKLSGIHHDILEGLVNYAYTSQIEITKRNVQSLLEAADLLQFLSVKKACEQFLVRHLDIDNCIGMHSFAEFHVCSELEKESRRILCSRFKEVWQQEEFLEISLEKFLFILSRKNLSVWKEEAILEPVIKWTAHDVENRIECIYNLLSYINIDIDPVYLKTALGLQRSCLLTENKIRSLIYNALNPMHKEISQRSTATMYIIGGYYWHPLSEVHIWDPLTNVWIQGAEIPDYTRESYGVTCLGPNIYVTGGYRTDNIDALDTVWIYNSEGDEWTEGLPMLNARYYHCAVTLGGCVYALGGYRKGAPAEEAEFYDPLKEKWLPIANMIKGVGNATACVLHEVIYVIGGHCGYRGSCTYDKVQSYNSDINEWSLITASPHPEYGLCSVPFENKLYLVGGQTTITECYDPEQNEWRETAPMMERRMECGAVIMNGCIYVTGGYSYSKGTYLQSIEKYDPDLNKWEIVGNLPSAMRSHGCVCVYNV", "length": 558 }, "evidence": [ { "id": "A0A286ZIG7", "url": "https://omabrowser.org/oma/group/A0A286ZIG7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NBE8-1", "protein_name": "Kelch-like protein 23", "gene_name": "KLHL23", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALKGQEDYIYLFKDSTHPVDFLDAFRTFYLDGLFTDITLQCPSGIIFHCHRAVLAACSNYFKAMFTADMKEKFKNKIKLSGIHHDILEGLVNYAYTSQIEITKRNVQSLLEAADLLQFLSVKKACERFLVRHLDIDNCIGMHSFAEFHVCPELEKESRRILCSKFKEVWQQEEFLEISLEKFLFILSRKNLSVWKEEAIIEPVIKWTAHDVENRIECLYNLLSYINIDIDPVYLKTALGLQRSCLLTENKIRSLIYNALNPMHKEISQRSTATMYIIGGYYWHPLSEVHIWDPLTNVWIQGAEIPDYTRESYGVTCLGPNIYVTGGYRTDNIEALDTVWIYNSESDEWTEGLPMLNARYYHCAVTLGGCVYALGGYRKGAPAEEAEFYDPLKEKWIPIANMIKGVGNATACVLHDVIYVIGGHCGYRGSCTYDKVQSYNSDINEWSLITSSPHPEYGLCSVPFENKLYLVGGQTTITECYDPEQNEWREIAPMMERRMECGAVIMNGCIYVTGGYSYSKGTYLQSIEKYDPDLNKWEIVGNLPSAMRSHGCVCVYNV", "length": 558 }, "evidence": [ { "id": "A0A286ZIG7", "url": "https://omabrowser.org/oma/group/A0A286ZIG7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 191, "end_pos": 193, "annotation": "n_glycosylation_sequon" }, { "start_pos": 408, "end_pos": 410, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZIG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIG7" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 36, "end_pos": 104, "start_aa": "Thr", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 191, "end_pos": 193 }, { "start_pos": 408, "end_pos": 410 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZIH7-1", "uniprot_ac": "A0A286ZIH7", "uniprot_id": "A0A286ZIH7_PIG", "mass": { "chemical_mass": 47808.0, "monoisotopic_mass": 47808.0 }, "refseq": {}, "gene_names": [ { "name": "ACTR3", "type": "recommended", "evidence": [ { "id": "A0A286ZIH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7" } ] } ], "protein_names": [ { "name": "Actin related protein 3", "type": "synonym", "evidence": [ { "id": "A0A286ZIH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIH7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ACTR3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7", "locus": { "chromosome": "15", "start_pos": 20167421, "end_pos": 20104812, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015710", "url": "https://www.ensembl.org/id/ENSSSCG00000015710" } ] } } ], "crossref": [ { "id": "A0A286ZIH7", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZIH7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015710", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015710", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd10221", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10221", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "F2Z5D2", "url": "https://www.ebi.ac.uk/intact/interactors/id:F2Z5D2*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR004000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020902", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020902", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043129", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043129", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11937", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11937", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00022", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00022", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2029482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3928662", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928662", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5663213", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663213", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8856828", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856828", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZIH7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQ99", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQ99-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BS06", "url": "https://www.uniprot.org/uniprotkb/A0A287BS06", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BS06-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BS06-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9Y0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9Y0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9Y0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9Y0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFL3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFL3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPX4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPX4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5D2", "url": "https://www.uniprot.org/uniprotkb/F2Z5D2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5D2-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5D2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "LNVSEILIKFFLFFRYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS", "length": 418, "header": "tr|A0A286ZIH7-1|A0A286ZIH7_PIG Isoform 1 of Actin related protein 3 OS=Sus scrofa OX=9823 GN=ACTR3 PE=1 SV=2 CANONICAL=A0A286ZIH7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIH7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7/entry#A0A286ZIH7-1", "sequence": { "sequence": "LNVSEILIKFFLFFRYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS", "length": 418, "header": "tr|A0A286ZIH7-1|A0A286ZIH7_PIG Isoform 1 of Actin related protein 3 OS=Sus scrofa OX=9823 GN=ACTR3 PE=1 SV=2 CANONICAL=A0A286ZIH7-1" }, "locus": { "chromosome": "15", "start_pos": 20166302, "end_pos": 20125888, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038794.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038794.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031356.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031356.2" } ] } }, { "isoform_ac": "A0A286ZQ99-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7/entry#A0A286ZQ99-1", "sequence": { "sequence": "LNVSEILIKFFLFFRYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGPDLK", "length": 419, "header": "tr|A0A286ZQ99-1|A0A286ZQ99_PIG Computationally mapped isoform of Actin related protein 3 OS=Sus scrofa OX=9823 GN=ACTR3 PE=1 SV=2 CANONICAL=A0A286ZIH7-1" }, "locus": { "chromosome": "15", "start_pos": 20166412, "end_pos": 20125888, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043395.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043395.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033638.3", "url": 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"database": "Ensembl Transcript", "id": "ENSSSCT00000100546.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100546.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075643.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075643.1" } ] } }, { "isoform_ac": "A0A8W4FFL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7/entry#A0A8W4FFL3-1", "sequence": { "sequence": "HELNLGPPPQLTAESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDASAIFGYSISIK", "length": 331, "header": "tr|A0A8W4FFL3-1|A0A8W4FFL3_PIG Computationally mapped isoform of Actin related protein 3 OS=Sus scrofa OX=9823 GN=ACTR3 PE=1 SV=1 CANONICAL=A0A286ZIH7-1" }, "locus": { "chromosome": "15", "start_pos": 20162254, "end_pos": 20129449, "strand": "-", 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CANONICAL=A0A286ZIH7-1" }, "locus": { "chromosome": "15", "start_pos": 20166302, "end_pos": 20105161, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017110.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017110.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016650.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016650.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIH7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2029482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029482", "resource": "Reactome", "description": "Regulation of actin dynamics for phagocytic cup formation" }, { "id": "R-SSC-3928662", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928662", "resource": "Reactome", "description": "EPHB-mediated forward signaling" }, { "id": "R-SSC-5663213", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663213", "resource": "Reactome", "description": "RHO GTPases Activate WASPs and WAVEs" }, { "id": "R-SSC-8856828", "name": "", "url": 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"pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIH7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIH7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7" } ], "pmid": "" }, { "name": "brush border", "id": "GO:0005903", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005903", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIH7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7" } ], "pmid": "" }, { "name": "cell-cell junction", "id": "GO:0005911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005911", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIH7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIH7" } ], "pmid": "" }, { "name": "lamellipodium", "id": 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"NP_001230613", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230613" } ] } ], "protein_names": [ { "name": "WD repeat-containing protein 58", "type": "recommended", "evidence": [ { "id": "A0A286ZII9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9/entry#names_and_taxonomy" } ] }, { "name": "THO complex 6 homolog", "type": "synonym", "evidence": [ { "id": "NP_001230613", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230613" } ] }, { "name": "THO complex subunit 6", "type": "synonym", "evidence": [ { "id": "NP_001230613", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230613" } ] } ], "function": [ { "annotation": "Component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and which specifically associates with spliced mRNA and not with unspliced pre-mRNA. Plays a key structural role in the oligomerization of the THO-DDX39B complex. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NXF1 pathway. Plays a role in apoptosis negative control involved in brain development.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9#function" }, { "database": "UniProtKB", "id": "ARBA00058782", "url": "https://www.uniprot.org/uniprotkb/ARBA00058782#function" }, { "database": "UniProtKB", "id": "A0A287B720", "url": "https://www.uniprot.org/uniprotkb/A0A287B720#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "THOC6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9", "locus": { "chromosome": "3", "start_pos": 39161434, "end_pos": 39164707, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023315", "url": "https://www.ensembl.org/id/ENSSSCG00000023315" } ] } } ], "crossref": [ { "id": "ENSSSCG00000023315", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023315", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100626533", "url": "https://www.ncbi.nlm.nih.gov/gene/100626533", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "A0A8D1C278", "url": "https://www.ebi.ac.uk/intact/interactors/id:A0A8D1C278*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056551", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056551", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100626533", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626533", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZII9", "url": "https://www.orthodb.org/?gene=A0A286ZII9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44411", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44411", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44411:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44411:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23098", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23098", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-159236", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159236", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-72187", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72187", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001230613", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230613", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZII9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B720", "url": "https://www.uniprot.org/uniprotkb/A0A287B720", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B720-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B720-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VU18", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VU18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VU18-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VU18-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1C278", "url": "https://www.uniprot.org/uniprotkb/A0A8D1C278", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1C278-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1C278-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRAVPPAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPIVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAREVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF", "length": 341, "header": "tr|A0A286ZII9-1|A0A286ZII9_PIG Isoform 1 of WD repeat-containing protein 58 OS=Sus scrofa OX=9823 GN=THOC6 PE=1 SV=2 CANONICAL=A0A286ZII9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZII9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9/entry#A0A286ZII9-1", "sequence": { "sequence": "MDRAVPPAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPIVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAREVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF", "length": 341, "header": "tr|A0A286ZII9-1|A0A286ZII9_PIG Isoform 1 of WD repeat-containing protein 58 OS=Sus scrofa OX=9823 GN=THOC6 PE=1 SV=2 CANONICAL=A0A286ZII9-1" }, "locus": { "chromosome": "3", "start_pos": 39164336, "end_pos": 39161537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050374.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050374.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031297.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031297.2" } ] } }, { "isoform_ac": "A0A287B720-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9/entry#A0A287B720-1", "sequence": { "sequence": "MLAKSSTKHQAAPLSFLASFSEPFLGLYGQVPPGGLFHRRTERSRGCEAGLAAGKAGRSLWIRGLGSPRQPSSSLSPQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPIVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAREVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF", "length": 406, "header": "tr|A0A287B720-1|A0A287B720_PIG Computationally mapped isoform of WD repeat-containing protein 58 OS=Sus scrofa OX=9823 GN=THOC6 PE=1 SV=1 CANONICAL=A0A286ZII9-1" }, "locus": { "chromosome": "3", "start_pos": 39163767, "end_pos": 39161537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037747.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037747.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052094.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052094.1" } ] } }, { "isoform_ac": "A0A4X1VU18-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9/entry#A0A4X1VU18-1", "sequence": { "sequence": "MDRAVPPAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPIVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAREVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTIFPMRAPQKHVTFYQDLVLTAAGNSCRVDVFTNLGYRAFSLSF", "length": 296, "header": "tr|A0A4X1VU18-1|A0A286ZII9_PIG Computationally mapped isoform of WD repeat-containing protein 58 OS=Sus scrofa OX=9823 GN=THOC6 PE=1 SV=1 CANONICAL=A0A286ZII9-1" }, "locus": { "chromosome": "3", "start_pos": 39164336, "end_pos": 39161537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042790.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042790.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043339.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043339.2" } ] } }, { "isoform_ac": "A0A8D1C278-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9/entry#A0A8D1C278-1", "sequence": { "sequence": "MDRAVPPAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPIVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAREVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF", "length": 312, "header": "tr|A0A8D1C278-1|A0A286ZII9_PIG Computationally mapped isoform of WD repeat-containing protein 58 OS=Sus scrofa OX=9823 GN=THOC6 PE=1 SV=1 CANONICAL=A0A286ZII9-1" }, "locus": { "chromosome": "3", "start_pos": 39164336, "end_pos": 39161537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026356.2", "url": "https://www.ensembl.org/id/ENSSSCT00000026356.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020539.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020539.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VU18", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VU18" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626533", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626533", "resource": "KEGG Pathway" }, { "id": "R-SSC-159236", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159236", "resource": "Reactome", "description": "Transport of Mature mRNA derived from an Intron-Containing Transcript" }, { "id": "R-SSC-72187", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72187", "resource": "Reactome", "description": "mRNA 3'-end processing" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "THO complex", "id": "GO:0000347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000347", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "transcription export complex", "id": "GO:0000346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000346", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "THO complex part of transcription export complex", "id": "GO:0000445", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000445", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "chromosome, telomeric region", "id": "GO:0000781", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000781", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "mRNA export from nucleus", "id": "GO:0006406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006406", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" }, { "name": "central nervous system development", "id": "GO:0007417", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007417", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZII9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZII9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZII9" }, { "id": "PF23098", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23098" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Nucleolar protein 10-like N-terminal", "eco_id": "ECO_0000259", "start_pos": 131, "end_pos": 285, "start_aa": "Ala", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"length": 2992, "header": "tr|A0A286ZIL6-1|A0A286ZIL6_PIG Isoform 1 of Biorientation of chromosomes in cell division 1 like 1 OS=Sus scrofa OX=9823 GN=BOD1L1 PE=3 SV=2 CANONICAL=A0A286ZIL6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIL6/entry#A0A286ZIL6-1", "sequence": { "sequence": "MATNPQPQPPPPAPPPPPPQPQPPPPPPGPGTGPGAGGAGGAGAGAGDPQLVAMIVNHLKSQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNSIRQQVLKSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFLATLNHKEETGGSTAPDDEKPDSSVITQGVPAPGPSANVASDAMSILETITSLNQEASAARASTETSNAKACERTSKKLPSQPSTDTGAEKERTSEDATEKEKPTPDSAGEGQETALKSEELNDLPGPVEESKNHTKESNSSVLLNKDVQQESSDPKNKSTDKGEKKADSSEKGERKKEKKEKTEKKLDHSKRSEDVQKVKDERQTKDKDAECSKLPSEKNNSKAKTGEGTREDFSLIDSDVDGLTDITVSSVHTSDLSSFEEDTEEEVVVSDSMEEGEITSDDEEKNKQNKTKTQTGDPSEGRAKSVRHAYVHKPYLYSKYYSDSDDELTVEQRRQCIAKEKEERLLRRQINREKLEEKRKQKEKTKSSKAKSQGKGSMDLEESSTKSLEPKVPRIKEVLKERKVLEKKVALSKKRKKDSRNIDENSKKKQQSEDDSKETLKTSEHCEKEKTSSSKDLKHIHAKSESSKPARRLSESLHSTDDNKSESKTEREHKRRTSTPVVVEGAQEETDTRDGKRPVERSETGTEEPQKQKSILKNEKHLKKEDFETPHLKSLPKKEAKSTKDKPEKEKTLSEDKPSIKHKYKGDSAHKAGDEAELHSSEKGLTVDESTQKSSQPAKLSSDDKAERKSRHRNERKLSILGKDGKPVSEYIIKTDENVRKENNKKERHMSADKTKGEHKSRRSSDSKIQKDSLSSKQHGITLQRRSESYSEDKGDTDSTNTDSNPKPDEVVHKEKRRTKSLLEEKLVLKSKSKGQGKQSKALETELQENVTKQAPTPKADKEKNTEESDPDRPRKSKIEDRSPEESGVEPASESAAPSAHGAQKESSHRARLLPAKEKYKGEKDASSARLERKLSEGHRSRGLKHSGKDVRKREENKSEDKDGKEADGSNEKARGNSSVVEKKLSRRLCENRRGSLSQEMTKGEEKPAASPSGPPSSSSLQRPRKSNDPTSGPEEEPMEIDPEPAVENAPEVSKTQDGSSSSSQQDLDSDCLLKQKTTTAVLKEELRTCIEDSKKAAPACRSGRGTGAVGGTSEKHADHKSTLPKKVHLQSAVSKPSPGEREPTQPGTHSMNVDSDPGHRLLPRVASESDRAQKNLRNTSRPSEEDVAPGDAALEHSTDVDPSPSLSSGTVVPQKQSHDSGVVPVVDKRTVSEGGPASTSFVDHSETPNQSLTVAESEVPRISDSKEGAMLSTVDTPAMASVSSRGHIPEGYQATVLHTKQGNVNVPLSSELMGTTVENEPVNKESGLVDMAGRERDLKSSQTVRASVENGRKDGMAVGPAVGMCLENDAETAGLKPPRGLCEVENVSADANRRNENSEVDTSAGITAVSSVEQQRHGKAETVPTGFGRAEKTSVATSTEGKDRGVPSNPVKAGDATTTCSETGEGEVAVPCTSIEADEGFIAGMHPSSHPLHAGAEAHEGTVFAAAEEGGDVVTEGFAESETFLTSTKEGDSGECAVAEPEERAADPVMAHSGTAEGEVNSVATEEKDDAVTSAGSEGKCDGSSSRDAELAEATVAFISEVESDGAVTSAGTEIRAGSLSREETDGFQRNVTRMGPKKEIEGTVTCTGAEQRSDSFVMCLVTGAGPQEERRVMGAPGAPVDNDAPGGASATQEAGGSASDSPEGESAVTSTGITEEDGEGPASCTGSEESGEGFALISESEENGESAMDSTVAKDIANAPSVAAGPCDDEGIVTSTGAKEEDDEGEGVVTSTGRGNEVGHASTCTGPEEESEGLSICESAEEADGQVGTVARHVEAEVPSAHESSVDSMSGAEKDVKDTEICSSAKGVVESSVTSAAEGKGEAAPVPEGGEAPMTSAASDQSDGGLTQEETVDETAISAGLVGGSHEALVSGVVPGCGACPPSPSEKEDEGIITSVENEDCEGPVAAPARDKVTTQACSAGGKGQGKGLMISTSTTDGFTTQLSATVDVEEGGSSALRTEGSVEGTQVNVEEFEAPMPSAASGDESQLVAAGNEEKDECAMISTSLGEEFEVPVSSATTIQRAESQQAVAAVDAKRLMSVSTEDFEGPTPSAPAGVKSPRASTSKEEKDECALISTSIAEECEASVCGVAAERERERSVLIMEEKDGNAIISTSSVEDCEGPVSSAVPREEVRPSARPAEETGDTAMISTSTSEGREAVMAGAVPQDEDRPALAGAEDFGDTAVISTSTAECVLTASGLDRHEDNQLTAGNTGGKGDPSAAKASKPELPVPGVRAGSNRQCPGPCAGGRSGPMVALGSGEGQDRVAVSMLPPGAVCAPEEGRPGKDCGQAQRADKSPEAATSRDSAPASCSATRSSEMTSDSPVNPRKPEQTAQDSSGSLCCLTAVNTGAKKTDALSSLPPEGNLQTTPAECINGQESEIAPSHTAVLPTTCSGAFSAHKGEQDLTVKSDHSGRRTVAVSTEKAEDGDIVIKSSQEERGLEVIVSSEKYLHDSGSEESASNDLGGLRPKANLKTEVFVPSEEEKNHEIVAPPESPSGRKLSGRAELHGEPLLVTESLNVENSGSKANEIHSRSHNKDGTANGGKDNAVKGHGVEASPTEVEEEERHMPKRKRKKQYLSSEDELDDNPDVPDSKIETAQRQCSETEAEPQDTKEENPGDLEELSKTSSETDNTASRAMEEKDEYSSSEAAGDKTEQNDDDNIRSQEEDQPIIIKRKRGRPRKYPVETALKTKDDCRTDAGIITVEQSPPGSKLKVMQSDESSREPPSLHERTGSNDDGEEKSIASVRRRGRKPKRSLTLSEDAESSEPERKRQKSVSEATEDKRDQESDEEEDEEEEDEPSGATTRSSTRSEAQRSKAQLSPSAKRKREVSPPGARTRGQQRVEEAPAKKAKR", "length": 2992, "header": "tr|A0A286ZIL6-1|A0A286ZIL6_PIG Isoform 1 of Biorientation of chromosomes in cell division 1 like 1 OS=Sus scrofa OX=9823 GN=BOD1L1 PE=3 SV=2 CANONICAL=A0A286ZIL6-1" }, "locus": { "chromosome": "8", "start_pos": 9254286, "end_pos": 9198313, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058998.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058998.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031288.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031288.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 2189, "start_aa": "Thr", "end_pos": 2189, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr2189", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIL6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIL6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9772755", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9772755", "resource": "Reactome", "description": "Formation of WDR5-containing histone-modifying complexes" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIL6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIL6" } ], "pmid": "" }, { "name": "replication fork processing", "id": "GO:0031297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031297", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIL6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIL6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIL6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIL6" } ], "pmid": "" }, { "name": "Set1C/COMPASS complex", "id": "GO:0048188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048188", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIL6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIL6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1035, "end_pos": 1037, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1055, "end_pos": 1057, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1257, "end_pos": 1259, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1328, "end_pos": 1330, "annotation": "n_glycosylation_sequon" }, { "start_pos": 142, "end_pos": 144, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1465, "end_pos": 1467, "annotation": "n_glycosylation_sequon" }, { "start_pos": 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"https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020953023", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953023", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZIM9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTARLLPARDPEQVTFEDVVVDFTQEEWGQLEPAQRTLYRDVMLETFGLLVSVDLEARPQTKLSTAKQDITEEIPSNALVKSFLWESLWHSKGEDAEGPWEQSCKRPDSHAVHMAFMPVKTPTQEQQQGNGFGDTLSLSPDLPIQPMTPERQGPPMWGTHGKRGTLHSNAQQKISAKEKFYKCQECGKAFSHSSALIEHHRTHTGERPYECHECGKGFRNSSALSKHQRIHTGEKPYKCTQCGRTFNQTAPLTQHQRTHTGEKPYKCSECGKSFSFRSSFSQHERTHTGEKPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECQACGKAFTQITPLIQHQRTHTGERPYECSECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQHQRIHTGEKPYECGDCGKAFSHSSSLTKHQRIHTGEKPYECNECGRAFSQLAPLFQHQRIHTGEKPYECNECGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYECQDCGKSFRQSTHLTQHRRIHTGEKPYECRDCGKAFTHSSSLTKHQRTHTG", "length": 625, "header": "tr|A0A286ZIM9-1|A0A286ZIM9_PIG Isoform 1 of Zinc finger protein 135 OS=Sus scrofa OX=9823 GN=ZNF135 PE=3 SV=1 CANONICAL=A0A286ZIM9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9/entry#A0A286ZIM9-1", "sequence": { "sequence": "MTARLLPARDPEQVTFEDVVVDFTQEEWGQLEPAQRTLYRDVMLETFGLLVSVDLEARPQTKLSTAKQDITEEIPSNALVKSFLWESLWHSKGEDAEGPWEQSCKRPDSHAVHMAFMPVKTPTQEQQQGNGFGDTLSLSPDLPIQPMTPERQGPPMWGTHGKRGTLHSNAQQKISAKEKFYKCQECGKAFSHSSALIEHHRTHTGERPYECHECGKGFRNSSALSKHQRIHTGEKPYKCTQCGRTFNQTAPLTQHQRTHTGEKPYKCSECGKSFSFRSSFSQHERTHTGEKPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECQACGKAFTQITPLIQHQRTHTGERPYECSECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQHQRIHTGEKPYECGDCGKAFSHSSSLTKHQRIHTGEKPYECNECGRAFSQLAPLFQHQRIHTGEKPYECNECGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYECQDCGKSFRQSTHLTQHRRIHTGEKPYECRDCGKAFTHSSSLTKHQRTHTG", "length": 625, "header": "tr|A0A286ZIM9-1|A0A286ZIM9_PIG Isoform 1 of Zinc finger protein 135 OS=Sus scrofa OX=9823 GN=ZNF135 PE=3 SV=1 CANONICAL=A0A286ZIM9-1" }, "locus": { "chromosome": "6", "start_pos": 62767003, "end_pos": 62756243, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039252.2", "url": 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"https://www.uniprot.org/uniprotkb/A0A286ZIM9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIM9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIM9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIM9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIM9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIM9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIM9" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": 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Promotes clustering of HT2RC at the cell surface.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2#function" }, { "database": "UniProtKB", "id": "ARBA00057502", "url": "https://www.uniprot.org/uniprotkb/ARBA00057502#function" }, { "database": "UniProtKB", "id": "A0A287AG82", "url": "https://www.uniprot.org/uniprotkb/A0A287AG82#function" } ] }, { "annotation": "Scaffolding protein that facilitates the localization of proteins to the cell membrane. Required for the correct formation of tight junctions and epithelial apico-basal polarity. Acts (via its L27 domain) as an apical connector and elongation factor for multistranded TJP1/ZO1 condensates that form a tight junction belt, thereby required for the formation of the tight junction-mediated cell barrier. Positively regulates epithelial cell microtubule elongation and cell migration, possibly via facilitating localization of PRKCI/aPKC and PAR3D/PAR3 at the leading edge of migrating cells. Plays a role in the correct reorientation of the microtubule-organizing center during epithelial migration. May regulate the surface expression and/or function of ASIC3 in sensory neurons. 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"Protein Classification" ] }, { "id": "IPR001478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015132", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015132", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051342", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051342", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR19964", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19964", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19964:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19964:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00595", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00595", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09045", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09045", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZIN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIN2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AG82", "url": "https://www.uniprot.org/uniprotkb/A0A287AG82", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AG82-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AG82-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASE2", "url": "https://www.uniprot.org/uniprotkb/A0A287ASE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ASE2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHQ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPENPATDKLQVLQVLDRLKMKLQEKGDTSQNEKLSLFYETLKSPLFNQILTLQQSIKQLKGQLSHIPSDCTANFDFSRKGLLVFTDGASTSGNAHRSTNNQSVSGLFPWTTKLGNEDFSSIMQQMAQGRHIESIDIERPSTGGLGFSVVALRGQNLGEVNIFVKEVQPGSIAGRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLHLVVAREPVHTKSSASTSLTDVTLPETVRWGHIEDVELVNDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPIGEVSVTPPTPAALPVALPAVANRSPGSDSSTPCETYDVELIKKDGQSLGIRIVGYVGTTHTGEASGIYVKSIIPGSAAYHNGQIQVNDQIIAVDGVNIQGFANQDVVEVLRNAGQVVHLTLIRKRTSSSASPLEGNSDRGTVVEPLKTPALFLTGAVETETNLDEDEETEERIDNLKNDNIQALEKLEKVPDSLENELKSRWENLLGPDYEVMVATLDTQIADDAELQKYSKLLPIHTLRLGMEVDSFDGHHYISSIAPGGPVDTLNLLQPEDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDEASVDEPRTTEASLPAMEANRNIDVHTEEDDDGELALWSPEVKTVELVKDHKGLGFSILDYQDPLDPTRSVIVIRSLVPDGVAERGGELLPGDRLVSVNEYCLDNTTLAEAVEVLKAVPPGTVRLGICKPLVEEKEEESNILYSNNNEDKTETSGTIHGLNSSLILEAPKGFRDEPYFKEELVDEPFLDLGKAFQSQQKEIDTSKEAWEMHEFMAPRMQEMGEEREMLVDEEYELYQDHLQSMESYPSPHIQEAAPVPSMKELHFGAQWFCDHELPEPQEARSVMSVYSQEMQQCGYSAENTMKENVGIDSLPSMSSTEGNSPRGRFDDLENLNSLTKSSLDLGMMIPTDVQGPGLLVELPAVAQRREQEDLPLYQLPRTQAVSKASAYTGILSSRYATDPCELPEREEGEGEETPNFSHWGPPRIVEIFREPDVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGIDLQNASHKEAVEAIKNAGNPVVFVVQSLSSTPRVIPSAHNKTNKIANNQDKNTQEKKEKRRGTAPPPMKLPPPYKAPSDDSDETEEEYAFTNKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAKDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPLPSSSPSSIEDQSGTELVGSEEDGSVEVGIRQLPESASSKLAGSQSKQQKYSTKVSFSSQEIPLAPASYHSTDADFTGYGGFQAPLSVDPATCPIIPGQEMIIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGIDLRSASHEEAITALRQTPQKVRLVVYRDEAHYRDEENLEVFPVDLQKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRSASQETVATILKCAQGLVQLEIGRLRAGSWTSSRKTSQNSQGSQNSTHSSFPPSLAPVITSLQNLVSSKRPSDPSPKGSGTDVGPRTVEIIRELSDALGISIAGGKGSPLGDIPIFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVADTNISAIATQLENMSTGYHLGSPTTEHHPEDTETPPPKIITLEKGSEGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQILAVNGETLEGVTHEQAVAILKHQRGTVVLTVLS", "length": 1881, "header": "tr|A0A286ZIN2-1|A0A286ZIN2_PIG Isoform 1 of InaD-like protein OS=Sus scrofa OX=9823 GN=PATJ PE=4 SV=2 CANONICAL=A0A286ZIN2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIN2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2/entry#A0A286ZIN2-1", "sequence": { "sequence": "MPENPATDKLQVLQVLDRLKMKLQEKGDTSQNEKLSLFYETLKSPLFNQILTLQQSIKQLKGQLSHIPSDCTANFDFSRKGLLVFTDGASTSGNAHRSTNNQSVSGLFPWTTKLGNEDFSSIMQQMAQGRHIESIDIERPSTGGLGFSVVALRGQNLGEVNIFVKEVQPGSIAGRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLHLVVAREPVHTKSSASTSLTDVTLPETVRWGHIEDVELVNDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPIGEVSVTPPTPAALPVALPAVANRSPGSDSSTPCETYDVELIKKDGQSLGIRIVGYVGTTHTGEASGIYVKSIIPGSAAYHNGQIQVNDQIIAVDGVNIQGFANQDVVEVLRNAGQVVHLTLIRKRTSSSASPLEGNSDRGTVVEPLKTPALFLTGAVETETNLDEDEETEERIDNLKNDNIQALEKLEKVPDSLENELKSRWENLLGPDYEVMVATLDTQIADDAELQKYSKLLPIHTLRLGMEVDSFDGHHYISSIAPGGPVDTLNLLQPEDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDEASVDEPRTTEASLPAMEANRNIDVHTEEDDDGELALWSPEVKTVELVKDHKGLGFSILDYQDPLDPTRSVIVIRSLVPDGVAERGGELLPGDRLVSVNEYCLDNTTLAEAVEVLKAVPPGTVRLGICKPLVEEKEEESNILYSNNNEDKTETSGTIHGLNSSLILEAPKGFRDEPYFKEELVDEPFLDLGKAFQSQQKEIDTSKEAWEMHEFMAPRMQEMGEEREMLVDEEYELYQDHLQSMESYPSPHIQEAAPVPSMKELHFGAQWFCDHELPEPQEARSVMSVYSQEMQQCGYSAENTMKENVGIDSLPSMSSTEGNSPRGRFDDLENLNSLTKSSLDLGMMIPTDVQGPGLLVELPAVAQRREQEDLPLYQLPRTQAVSKASAYTGILSSRYATDPCELPEREEGEGEETPNFSHWGPPRIVEIFREPDVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGIDLQNASHKEAVEAIKNAGNPVVFVVQSLSSTPRVIPSAHNKTNKIANNQDKNTQEKKEKRRGTAPPPMKLPPPYKAPSDDSDETEEEYAFTNKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAKDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPLPSSSPSSIEDQSGTELVGSEEDGSVEVGIRQLPESASSKLAGSQSKQQKYSTKVSFSSQEIPLAPASYHSTDADFTGYGGFQAPLSVDPATCPIIPGQEMIIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGIDLRSASHEEAITALRQTPQKVRLVVYRDEAHYRDEENLEVFPVDLQKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRSASQETVATILKCAQGLVQLEIGRLRAGSWTSSRKTSQNSQGSQNSTHSSFPPSLAPVITSLQNLVSSKRPSDPSPKGSGTDVGPRTVEIIRELSDALGISIAGGKGSPLGDIPIFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVADTNISAIATQLENMSTGYHLGSPTTEHHPEDTETPPPKIITLEKGSEGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQILAVNGETLEGVTHEQAVAILKHQRGTVVLTVLS", "length": 1881, "header": "tr|A0A286ZIN2-1|A0A286ZIN2_PIG Isoform 1 of InaD-like protein OS=Sus scrofa OX=9823 GN=PATJ PE=4 SV=2 CANONICAL=A0A286ZIN2-1" }, "locus": { "chromosome": "6", "start_pos": 150591911, "end_pos": 150251342, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051916.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051916.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031375.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031375.2" } ] } }, { "isoform_ac": "A0A287AG82-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2/entry#A0A287AG82-1", "sequence": { "sequence": "MPENPATDKLQVLQVLDRLKMKLQEKGDTSQNEKLSLFYETLKSPLFNQILTLQQSIKQLKGQLSHIPSDCTANFDFSRKGLLVFTDGASTSGNAHRSTNNQSVSGLFPWTTKLGNEDFSSIMQQMAQGRHIESIDIERPSTGGLGFSVVALRGQNLGEVNIFVKEVQPGSIAGRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLHLVVAREPVHTKSSASTSLTDVTLPETVRWGHIEDVELVNDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPIGEVSVTPPTPAALPVALPAVANRSPGSDSSTPCETYDVELIKKDGQSLGIRIVGYVGTTHTGEASGIYVKSIIPGSAAYHNGQIQVNDQIIAVDGVNIQGFANQDVVEVLRNAGQVVHLTLIRKRTSSSASPLEGNSDRGTVVEPLKTPALFLTGAVETETNLDEDEETEERIDNLKNDNIQALEKLEKVPDSLENELKSRWENLLGPDYEVMVATLDTQIADDAELQKYSKLLPIHTLRLGMEVDSFDGHHYISSIAPGGPVDTLNLLQPEDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDEASVDEPRTTEASLPAMEANRNIDVHTEEDDDGELALWSPEVKTVELVKDHKGLGFSILDYQDPLDPTRSVIVIRSLVPDGVAERGGELLPGDRLVSVNEYCLDNTTLAEAVEVLKAVPPGTVRLGICKPLVEEKEEESNILYSNNNEDKTETSGTIHGLNSSLILEAPKGFRDEPYFKEELVDEPFLDLGKAFQSQQKEIDTSKEAWEMHEFMAPRMQEMGEEREMLVDEEYELYQDHLQSMESYPSPHIQEAAPVPSMKELHFGAQWFCDHELPEPQEARSVMSVYSQEMQQCGYSAENTMKENVGIDSLPSMSSTEGNSPRGRFDDLENLNSLTKSSLDLGMMIPTDVQGPGLLVELPAVAQRREQEDLPLYQLPRTQAVSKASAYTGILSSRYATDPCELPEREEGEGEETPNFSHWGPPRIVEIFREPDVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGIDLQNASHKEAVEAIKNAGNPVVFVVQSLSSTPRVIPSAHNKTNKIANNQDKNTQEKKEKRRGTAPPPMKLPPPYKAPSDDSDETEEEYAFTNKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAKDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPLPSSSPSSIEDQSGTELVGSEEDGSVEVGIRQLPESASSKLAGSQSKQQKYSTKVSFSSQEIPLAPASYHSTDADFTGYGGFQAPLSVDPATCPIIPGQEMIIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGIDLRSASHEEAITALRQTPQKVRLVVYRDEAHYRDEENLEVFPVDLQKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRSASQETVATILKCAQGLVQLEIGRLRAGSWTSSRKTSQNSQGSQNSTHSSFPPSLAPVITSLQNLVSSKRPSDPSPKGSGTDVGPRTVEIIRELSDALGISIAGGKGSPLGDIPIFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVADTNISAIATQLENMSTGYHLGSPTTEHHPEDTEEQLQMTAD", "length": 1800, "header": "tr|A0A287AG82-1|A0A287AG82_PIG Computationally mapped isoform of InaD-like protein OS=Sus scrofa OX=9823 GN=PATJ PE=4 SV=2 CANONICAL=A0A286ZIN2-1" }, "locus": { "chromosome": "6", "start_pos": 150591911, "end_pos": 150251461, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047394.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047394.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042987.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042987.2" } ] } }, { "isoform_ac": "A0A287ASE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2/entry#A0A287ASE2-1", "sequence": { "sequence": "MPENPATDKLQVLQVLDRLKMKLQEKGDTSQNEKLSLFYETLKSPLFNQILTLQQSIKQLKGQLSHIPSDCTANFDFSRKGLLVFTDGASTSGNAHRSTNNQSVSGLFPWTTKLGNEDFSSIMQQMAQGRHIESIDIERPSTGGLGFSVVALRGQNLGEVNIFVKEVQPGSIAGRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLHLVVAREPVHTKSSASTSLTDVTLPETVRWGHIEDVELVNDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPIGEVSVTPPTPAALPVALPAVANRSPGSDSSTPCETYDVELIKKDGQSLGIRIVGYVGTTHTGEASGIYVKSIIPGSAAYHNGQIQVNDQIIAVDGVNIQGFANQDVVEVLRNAGQVVHLTLIRKRTSSSASPLEGNSDRGTVVEPLKTPALFLTGAVETETNLDEDEETEERIDNLKNDNIQALEKLEKVPDSLENELKSRWENLLGPDYEVMVATLDTQIADDAELQKYSKLLPIHTLRLGMEVDSFDGHHYISSIAPGGPVDTLNLLQPEDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDEASVDEPRTTEASLPAMEANRNIDVHTEEDDDGELALWSPEVKTVELVKDHKGLGFSILDYQDPLDPTRSVIVIRSLVPDGVAERGGELLPGDRLVSVNEYCLDNTTLAEAVEVLKAVPPGTVRLGICKPLVEEKEEESNILYSNNNEDKTETSGTIHGLNSSLILEAPKGFRDEPYFKEELVDEPFLDLGKAFQSQQKEIDTSKEAWEMHEFMAPRMQEMGEEREMLVDEEYELYQDHLQSMESYPSPHIQEAAPVPSMKELHFGAQWFCDHELPEPQEARSVMSVYSQEMQQCGYSAENTMKENVGIDSLPSMSSTEGNSPRGRFDDLENLNSLTKSSLDLGMMIPTDVQGPGLLVELPAVAQRREQEDLPLYQLPRTQAVSKASAYTGILSSRYATDPCELPEREEGEGEETPNFSHWGPPRIVEIFREPDVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGIDLQNASHKEAVEAIKNAGNPVVFVVQSLSSTPRVIPSAHNKTNKIANNQDKNTQEKKEKRRGTAPPPMKLPPPYKAPSDDSDETEEEYAFTNKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAKDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPLPSSSPSSIEDQSGTELVGSEEDGSVEVGIRQLPESASSKLEDISQAAGQGVVTGQQKAPECPTDNGQSGASLPLPESSSWGWVPWLTTDPEGRLAAKVNSRNIQQRSPSVHKRSL", "length": 1450, "header": "tr|A0A287ASE2-1|A0A287ASE2_PIG Computationally mapped isoform of PATJ crumbs cell polarity complex component OS=Sus scrofa OX=9823 GN=PATJ PE=4 SV=3 CANONICAL=A0A286ZIN2-1" }, "locus": { "chromosome": "6", "start_pos": 150591911, "end_pos": 150321809, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049847.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049847.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046830.3", "url": "https://www.ensembl.org/id/ENSSSCP00000046830.3" } ] } }, { "isoform_ac": "A0A5G2QHQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2/entry#A0A5G2QHQ1-1", "sequence": { "sequence": "MVQGGFPEKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAKDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPLPSSSPSSIEDQSGTELVGSEEDGSVEVGIRQLPESASSKLAGSQSKQQKYSTKVSFSSQEIPLAPASYHSTDADFTGYGGFQAPLSVDPATCPIIPGQEMIIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGIDLRSASHEEAITALRQTPQKVRLVVYRDEAHYRDEENLEVFPVDLQKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRSASQETVATILKCAQGLVQLEIGRLRAGSWTSSRKTSQNSQGSQNSTHSSFPPSLAPVITSLQNLVSSKRPSDPSPKGSGTDVGPRTVEIIRELSDALGISIAGGKGSPLGDIPIFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVADTNISAIATQLENMSTGYHLGSPTTEHHPEDTETPPPKIITLEKGSEGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQILAVNGETLEGVTHEQAVAILKHQRGTVVLTVLS", "length": 665, "header": "tr|A0A5G2QHQ1-1|A0A286ZIN2_PIG Computationally mapped isoform of InaD-like protein OS=Sus scrofa OX=9823 GN=PATJ PE=4 SV=1 CANONICAL=A0A286ZIN2-1" }, "locus": { "chromosome": "6", "start_pos": 150430235, "end_pos": 150251342, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086884.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086884.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061518.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061518.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 338, "start_aa": "Thr", "end_pos": 338, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr338", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHQ1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHQ1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "tight junction assembly", "id": "GO:0120192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120192", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 9, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2" } ], "pmid": "" }, { "name": "bicellular tight junction", "id": "GO:0005923", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005923", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIN2" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22776", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22776:SF29", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22776:SF29", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01284", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01284", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020949664", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949664", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZIP7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRSALGCLKVAQVILALIAFICIETIMECSPCEGLYFFEFVSCSAFVVTGVLLILFSLNLHMRIPQINWNLTDLVNTGLSTFFFFIASIVLAALNHKTGAEIAAVIFGFLATAVYAVNTFLAAQKWRVSLRQQSANDYIRARTESRDVDGRPEIQRLDT", "length": 208, "header": "tr|A0A286ZIP7-1|A0A286ZIP7_PIG Isoform 1 of CKLF like MARVEL transmembrane domain containing 4 OS=Sus scrofa OX=9823 GN=CMTM4 PE=4 SV=1 CANONICAL=A0A286ZIP7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP7/entry#A0A286ZIP7-1", "sequence": { "sequence": "MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRSALGCLKVAQVILALIAFICIETIMECSPCEGLYFFEFVSCSAFVVTGVLLILFSLNLHMRIPQINWNLTDLVNTGLSTFFFFIASIVLAALNHKTGAEIAAVIFGFLATAVYAVNTFLAAQKWRVSLRQQSANDYIRARTESRDVDGRPEIQRLDT", "length": 208, "header": "tr|A0A286ZIP7-1|A0A286ZIP7_PIG Isoform 1 of CKLF like MARVEL transmembrane domain containing 4 OS=Sus scrofa OX=9823 GN=CMTM4 PE=4 SV=1 CANONICAL=A0A286ZIP7-1" }, "locus": { "chromosome": "6", "start_pos": 27391318, "end_pos": 27325787, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064846.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064846.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031390.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031390.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIP7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110260935", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260935", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0L8K2-1", "protein_name": "CKLF-like MARVEL transmembrane domain containing 4", "gene_name": "Cmtm4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRGGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMECSPCEGLYFFEFVSCSAFVVTGVLLILFSLNLHMRIPQINWSLTDLVNTGLSTFFFFIASIVLAALNHKTGAEIAAVIFGFLATAAYAVSTFLAVQKWRVSIRQQSANDYIRARTESRDVDGRPEIQRLDT", "length": 208 }, "evidence": [ { "id": "A0A286ZIP7", "url": "https://omabrowser.org/oma/group/A0A286ZIP7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1P203-1", "protein_name": "CKLF like MARVEL transmembrane domain containing 4", "gene_name": "CMTM4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRNGEDLEGFDGEASSTSMISGASSPYQPTTEPVSQRRGLGGLRCDLDYLRGTFGRIKLAEVVLALIAFICIETIMECSPCEGLYFFEFVSCSTLVVTGVLLLMFSLNLHTRIPQINWNLTDLVNTGLSTFFFFIASVVLAALNHKTGAEIAAVIFGFLAMAVYAVNTYLAIKKWWMNSRQQNSRQTSDYIRARTESREVDHRPEIQRLDA", "length": 211 }, "evidence": [ { "id": "A0A286ZIP7", "url": "https://omabrowser.org/oma/group/A0A286ZIP7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8CJ61-1", "protein_name": "CKLF-like MARVEL transmembrane domain-containing protein 4", "gene_name": "Cmtm4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRGGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMECSPCEGLYFFEFVSCSAFVVTGVLLILFSLNLHMRIPQINWNLTDLVNTGLSTFFFFIASIVLAALNHKTGAEIAAVIFGFLATAAYAVSTFLAMQKWRVSVRQQSTNDYIRARTESRDVDSRPEIQRLDT", "length": 208 }, "evidence": [ { "id": "A0A286ZIP7", "url": "https://omabrowser.org/oma/group/A0A286ZIP7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZR5-1", "protein_name": "CKLF-like MARVEL transmembrane domain-containing protein 4", "gene_name": "CMTM4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRARTESRDVDSRPEIQRLDTFSYSTNVTVRKKSPTNLLSLNHWQLA", "length": 234 }, "evidence": [ { "id": "A0A286ZIP7", "url": "https://omabrowser.org/oma/group/A0A286ZIP7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIP7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZIP7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP7" }, { "id": "PS51225", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51225" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MARVEL", "eco_id": "ECO_0000259", "start_pos": 49, "end_pos": 176, "start_aa": "Tyr", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 119, "end_pos": 121 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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"evidence": [ { "id": "A0A286ZIR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIR5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIR5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIR5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UBAP2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIR5", "locus": { "chromosome": "10", "start_pos": 32892867, "end_pos": 32756040, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010987", "url": "https://www.ensembl.org/id/ENSSSCG00000010987" } ] } } ], "crossref": [ { "id": "A0A286ZIR5", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZIR5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010987", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010987", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd14277", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14277", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015940", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015940", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022166", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022166", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051833", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051833", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR060532", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060532", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR16308", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16308", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16308:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16308:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF28540", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28540", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZIR5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIR5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIR5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIR5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMTSVSNDRSRGAREKPQISVTQTTQLQKQVVQATAEQMRLAQVIFDKNDSEFEAKVKQLMEVTGKNQDECIVALHDCNGDVNKAINILLEGNSDTTSWETVGGKKKNFGKDSSENKENREKRSEREVSRGRGNNNRKGRGGNRGREFRGEENGIDSNQGDKPSDRGKRARGRGFGRGRGRGAGRFSTQGMGTFNPADYSDSPSIDGCGTKPVVWEAVQNGADEGTGAWKNSVEEWTTEDWTEDLSETKVFTSSSVPAENHVTPGQSVDLVALLQKPVPQASEVNSFESSQQQGFGQALVFTNSQHNNQIAPGNGSSTTVNSYSPQSLSSVLGSGFGELAPSKMANITSSHILDQLKAPGLGQFTTTPSSQQNSTSPPTTTSSWDLKPSASQSSVLSHFDFKSQPEPSPVLSQLSQRQQHQTQAVSVPPPGLEPFPSQVKLRESAPRDSSASTVHKLLQLPSMTVENMTVSAHPPQPKHVKLPKRRMPPASKIPASAVEMPGSADVTGLNVQFGALEFGSEPSLSEFGSVASSETSSQIPISLYSKSLSDSLNTSLPMTSAVQNSTYTTSVITSSSLTSSSLSSTSPVTTSSSYDQSSVHNRIAYQSSVSPSESAPGTIANGHGGSRSQQTIDTTSSVPAPKTTDPPSALPSAGSLPSTTSCAPLLSSASQHTATLPSLSQPGDLSSSPLSQLSSSLSGHQSSLSSSTSHTHASVESAPPLQPSATFSTAATSASSATSSGLSLPSSMNTVSSLCLGATAASAPSSSTRATPLVTSGKAPPNLPQGVPPLLHNQYLVGPGGLLPAYPDYYGIPFATPPALASRDGSLTNNPYSGDVTKFGRGDSASPAPATTLAQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYAGVPSAFQYGPTMFVPPASAKQPGVSLSTPTPPFQQAGGYGQHSYSTGYDDLTQGTAAGDYTKGGYGGSSQAQNKSAGSGPGKGVSASSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPPFSLPSALGSTGPLAPGAAPGYVPPPFLHILPAHQQPPSQLLHHHLLQDAQVSPVVEAAILPWAGGSTPALTAFSPPQSGSGQRSQPSSLQPKSQASKPAYGNSPYWTN", "length": 1117, "header": "tr|A0A286ZIR5-1|A0A286ZIR5_PIG Isoform 1 of Ubiquitin associated protein 2 OS=Sus scrofa OX=9823 GN=UBAP2 PE=4 SV=2 CANONICAL=A0A286ZIR5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIR5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIR5/entry#A0A286ZIR5-1", "sequence": { "sequence": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZIU1-1", "uniprot_ac": "A0A286ZIU1", "uniprot_id": "A0A286ZIU1_PIG", "mass": { "chemical_mass": 82379.0, "monoisotopic_mass": 82379.0 }, "refseq": {}, "gene_names": [ { "name": "HEMGN", "type": "recommended", "evidence": [ { "id": "A0A286ZIU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1" } ] }, { "name": "TRMO", "type": "synonym", "evidence": [ { "id": "A0A286ZIU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1" } ] } ], "protein_names": [ { "name": "tRNA methyltransferase O", "type": "synonym", "evidence": [ { "id": "A0A286ZIU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIU1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HEMGN", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1", "locus": {} } ], "crossref": [ { "id": "A0A286ZIU1", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZIU1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005371", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005371", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09281", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09281", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR023368", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023368", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023370", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023370", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033272", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033272", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036413", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036413", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036414", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036414", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040372", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040372", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IDMIQGT", "url": "https://omabrowser.org/oma/group/IDMIQGT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12818", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12818", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12818:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12818:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15993", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15993", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15993:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15993:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01980", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01980", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "70027", "url": "https://www.rhea-db.org/rhea/70027", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZIU1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIU1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARZ2", "url": "https://www.uniprot.org/uniprotkb/A0A287ARZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARZ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSG8", "url": "https://www.uniprot.org/uniprotkb/F1SSG8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSG8-1", "url": "https://www.uniprot.org/uniprotkb/F1SSG8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLGKNQSHLMHHQTPDSHQEENHAPEVIGTWSLRNREQLRKRKAEAQEKQTLQWQFGEKKYKRQKTGKRSKRGRKKQENTEMKVEPLSQLENEMMEKVQAPTEKETELPRSVTEAFFLAASPQRVVPEKHSSEIGQESIIHQKDSSEYQEIAVQNHPSEICQEMAESEDLSPKVCKEIAVFQDHPSIMCCDVAEPEDISPKMCQETAAAKALSPKTCEDIAVLEGCSLEVYPQPEVPKGYVLETHQKRAEPDKHNSAPGQGIAETESFVPKTQERAVPKELATKTFHETVEPEQVFHKTCQEIAVYKAPAHKTIQETPAPEEYPPEIYQETAKSKEYPPEIYQEKPASKEHPPEICQETPGPEEYSPVIYQETPGPEDCASEIHQETPGPEDLSIKTYKDKEVPKECFPESYQGTDGPQDQDPKAHQEDAKDVYTFPREMKEKPKAEEPEIPAIPNVPQEMTENDIYRNLLTEPIGYLESCFLAKNGTPRQPTICSHSRACLRIRKSIFNNPEHSLMGLEQFSHVWILFVFHKNGHLSCKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAIYLSGIDMIHGTPVLDIKPYIADYDSPQDLIEPLGDFHLQENQCKPKPMSQSDGTIDSCDWQQLSGYEEPQAYICTKEKPHAPKTELQEKMIQNTMTTQQKSSETHLSPGREQQIWVKNQEVARVQVWQKGREVHGTWRRAF", "length": 724, "header": "tr|A0A286ZIU1-1|A0A286ZIU1_PIG Isoform 1 of tRNA methyltransferase O OS=Sus scrofa OX=9823 GN=HEMGN PE=1 SV=1 CANONICAL=A0A286ZIU1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIU1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1/entry#A0A286ZIU1-1", "sequence": { "sequence": "MDLGKNQSHLMHHQTPDSHQEENHAPEVIGTWSLRNREQLRKRKAEAQEKQTLQWQFGEKKYKRQKTGKRSKRGRKKQENTEMKVEPLSQLENEMMEKVQAPTEKETELPRSVTEAFFLAASPQRVVPEKHSSEIGQESIIHQKDSSEYQEIAVQNHPSEICQEMAESEDLSPKVCKEIAVFQDHPSIMCCDVAEPEDISPKMCQETAAAKALSPKTCEDIAVLEGCSLEVYPQPEVPKGYVLETHQKRAEPDKHNSAPGQGIAETESFVPKTQERAVPKELATKTFHETVEPEQVFHKTCQEIAVYKAPAHKTIQETPAPEEYPPEIYQETAKSKEYPPEIYQEKPASKEHPPEICQETPGPEEYSPVIYQETPGPEDCASEIHQETPGPEDLSIKTYKDKEVPKECFPESYQGTDGPQDQDPKAHQEDAKDVYTFPREMKEKPKAEEPEIPAIPNVPQEMTENDIYRNLLTEPIGYLESCFLAKNGTPRQPTICSHSRACLRIRKSIFNNPEHSLMGLEQFSHVWILFVFHKNGHLSCKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAIYLSGIDMIHGTPVLDIKPYIADYDSPQDLIEPLGDFHLQENQCKPKPMSQSDGTIDSCDWQQLSGYEEPQAYICTKEKPHAPKTELQEKMIQNTMTTQQKSSETHLSPGREQQIWVKNQEVARVQVWQKGREVHGTWRRAF", "length": 724, "header": "tr|A0A286ZIU1-1|A0A286ZIU1_PIG Isoform 1 of tRNA methyltransferase O OS=Sus scrofa OX=9823 GN=HEMGN PE=1 SV=1 CANONICAL=A0A286ZIU1-1" }, "locus": { "chromosome": "1", "start_pos": 239805096, "end_pos": 239772544, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057353.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057353.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031363.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031363.2" } ] } }, { "isoform_ac": "A0A287ARZ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1/entry#A0A287ARZ2-1", "sequence": { "sequence": "MRGLEDPGPRPKATPCGCVKPTLETGNLLTEPIGYLESCFLAKNGTPRQPTICSHSRACLRIRKSIFNNPEHSLMGLEQFSHVWILFVFHKNGHLSCKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAIYLSGIDMIHGTPVLDIKPYIADYDSPQDLIEPLGDFHLQENQCKPKPMSQSDGTIDSCDWQQLSGYEEPQAYICTKEKPCPEDRTSGENDTKHDDDTAEIQRNSPKPRERAADLGEESGSGSSPSVAEGQRGPWHLEKSFLEEQADSRLRRGKEAVVPPGHSAKLPPEALPCPSRVADAAHRSVVPAWVREAPVATLEVRFTPHAEMDLEHLSSGDSGVGRASFKYFQSAEEVKRAIEAVLSADPRSVYRRKLCQDRLFYFTVDIAHVTCWFGDGFAEVLKIKPASEPVQMSDAAESLVSLGS", "length": 443, "header": "tr|A0A287ARZ2-1|A0A287ARZ2_PIG Computationally mapped isoform of tRNA (adenine(37)-N6)-methyltransferase OS=Sus scrofa OX=9823 GN=HEMGN PE=3 SV=1 CANONICAL=A0A286ZIU1-1" }, "locus": { "chromosome": "1", "start_pos": 239786900, "end_pos": 239768847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062895.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062895.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046832.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046832.1" } ] } }, { "isoform_ac": "F1SSG8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIU1/entry#F1SSG8-1", "sequence": { "sequence": "MRGLEDPGPRPKATPCGCVKPTLETGNLLTEPIGYLESCFLAKNGTPRQPTICSHSRACLRIRKSIFNNPEHSLMGLEQFSHVWILFVFHKNGHLSCKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEVTGVIQVILKKRGLYTRSEHHGATLHSVCHSGNHH", "length": 171, "header": "tr|F1SSG8-1|A0A286ZIU1_PIG Computationally mapped isoform of tRNA methyltransferase O OS=Sus scrofa OX=9823 GN=HEMGN PE=1 SV=4 CANONICAL=A0A286ZIU1-1" }, "locus": { "chromosome": "1", "start_pos": 239786900, "end_pos": 239773441, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005910.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005910.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005763.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005763.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSG8", "url": "https://www.uniprot.org/uniprotkb/F1SSG8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "G3H7F5-1", "protein_name": "tRNA (adenine(37)-N6)-methyltransferase", "gene_name": "Trmo", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MRGLAERGPCAPAAPCGCAQPALETGNLLTEPIGYLESCFSAKNGTPRQPSICSHSRACLKIRKNIFNNPEHSLMGLEQFSHVWILFVFHKNGHLNYKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAVYLSGIDMIHGTPVLDIKPYIADYDSPRSEEPLEDLNVQSNHRLLRPASQSDGTADSCDQRLPLGCGKAQHGRSTEEKQTCLEDRTPEENFTKSRDSTEIQHTSPEDRETVVDLVLESSRSDSVGMAEEQRGPQDLKSFLDEGTDRSRNMEHALGLQGSSAETRWPSCHARTTDRVPCSVVPTWVKEAPAPSLQVRFTPHAELDLKKLSPGGAGQVSFRYFESTDEAKRAIEAVLSADPRSVYRRKLCQDRLFFFTVDIAHVTCWFGDGFAEVLRIKLASEPVEMTDPEESLVALGS", "length": 436 }, "evidence": [ { "id": "A0A286ZIU1", "url": "https://omabrowser.org/oma/group/A0A286ZIU1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q4V7E0-1", "protein_name": "tRNA (adenine(37)-N6)-methyltransferase", "gene_name": "Trmo", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRGLEKQGPSATAAPCGCAQPALETGNLLTEPIGYLESCFSAKIGTPRQPSICSQSRACLKIRKSIFNNPEHSLMGLEQFSHVWILFVFHKNGHLNYKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAVYLSGIDMIHGTPVLDIKPYIADYDSPQNLEPQTKHHKLRAAGPSDATANSCDQQLLSGCEKAQPCHSTKEKPKCREHRTSDENSQKFRDTSEIQHTLPEDRERAVDLALESSREETMDEPEDQLGPQELKSFLEEGTDRPRKVEGALVLRGSSAETRWDASCHARTADRVPCSVVPSWVKEAPVATLQVRFTPHAEMDLRKLSSGGASQTSFKYFHSAEEAKCAIEAMLSADPRSVYRRKLCEDRLFFFTVDIAHVTCWFGDGFAEVLRIKLASEPVEVADPEESLVALGS", "length": 431 }, "evidence": [ { "id": "A0A286ZIU1", "url": "https://omabrowser.org/oma/group/A0A286ZIU1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q562D6-1", "protein_name": "tRNA (adenine(37)-N6)-methyltransferase", "gene_name": "Trmo", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRGLEKQGSCATAAPCGCVQPALEAGNLLTEPIGYLESCFPAKIGTPRQPSICSHSRACLKIRKNIFNNPEHSLMGLEEFSHVWILFVFHKNGHLNYKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAVYLSGVDMIDGTPVLDIKPYIADYDSPQNLSVHNDHHKLRAEAQVDGTANSCDQLLLSGRGKVQPRQSTKERPKCLEDRTSGENSQKSRDMSEIQHTLPEDRERALDLALEPSRGESMDMPENQLGPPELKSFLEEGTDRPRKVEGALVLPGSSAETQWDASYRARTADRVPYSVVPSWVTEAPVAPLQVRFTPHAEMDLRKLNSGDASQPSFKYFHSAEEAKRAIEAVLSADPRSVYRRKLCEDRLFFFTVDTAHVTCWFGDGFAEVVRIKLASESVQVADPEESLAALGS", "length": 431 }, "evidence": [ { "id": "A0A286ZIU1", "url": "https://omabrowser.org/oma/group/A0A286ZIU1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BU70-1", "protein_name": "tRNA (adenine(37)-N6)-methyltransferase", "gene_name": "TRMO", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRGLEESGPRPTATPCGCVKPALETGNLLTEPVGYLESCFSAKNGTPRQPSICSYSRACLRIRKRIFNNPEHSLMGLEQFSHVWILFVFHKNGHLSCKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAIYLSGIDMIHGTPVLDIKPYIAEYDSPQNVMEPLADFNLQNNQHTPNTVSQSDSKTDSCDQRQLSGCDEPQPHHSTKRKPKCPEDRTSEENYLTHSDTARIQQAFPMHREIAVDFGLESRRDQSSSVAEEQIGPYCPEKSFSEKGTDKKLERVEGAAVLQGSRAETQPMAPHCPAGRADGAPRSVVPAWVTEAPVATLEVRFTPHAEMDLGQLSSQDVGQASFKYFQSAEEAKRAIEAVLSADPRSVYRRKLCQDRLFYFTVDIAHVTCWFGDGFAEVLRIKPASEPVHMTGPVGSLVSLGS", "length": 441 }, "evidence": [ { "id": "A0A286ZIU1", "url": "https://omabrowser.org/oma/group/A0A286ZIU1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "R4GEK9-1", "protein_name": "tRNA (adenine(37)-N6)-methyltransferase", "gene_name": "trmo", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"https://alphafold.ebi.ac.uk/entry/A0A286ZIV2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000032894", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032894", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050302", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050302", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR47219", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47219", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47219:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47219:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00566", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00566", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8854214", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854214", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZIV2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "NVRKNLDFEPLSTTALILEDRPANLPAKPAEEAQKHRQQYEEMVVQAKKRELKEAQRRKKQLEERCKLEESIGNAVLTWNNEILPNWETMWCSRKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWRSFSTGNPTVSHEDADVGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDTLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDW", "length": 290, "header": "tr|A0A286ZIV2-1|A0A286ZIV2_PIG Isoform 1 of Rab-GAP TBC domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110258247 PE=4 SV=3 CANONICAL=A0A286ZIV2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV2/entry#A0A286ZIV2-1", "sequence": { "sequence": "NVRKNLDFEPLSTTALILEDRPANLPAKPAEEAQKHRQQYEEMVVQAKKRELKEAQRRKKQLEERCKLEESIGNAVLTWNNEILPNWETMWCSRKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWRSFSTGNPTVSHEDADVGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDTLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDW", "length": 290, "header": "tr|A0A286ZIV2-1|A0A286ZIV2_PIG Isoform 1 of Rab-GAP TBC domain-containing protein OS=Sus scrofa OX=9823 GN=LOC110258247 PE=4 SV=3 CANONICAL=A0A286ZIV2-1" }, "locus": { "chromosome": "AEMK02000641.1", "start_pos": 63649, "end_pos": 44653, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038327.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038327.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031482.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031482.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIV2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8854214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854214", "resource": "Reactome", "description": "TBC/RABGAPs" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIV2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "recycling endosome", "id": "GO:0055037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055037", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIV2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV2" } ], "pmid": 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"MQFLHKLVLSHNPLTTVEDSYLYKLPALRYLDLGTTQVSLTTVESILMMTLELEKLILPSHMACCLCQFKNSIEVVCKTVKLHCDRCLQNSARCDKETSLGHAEGSFMKVLQARKKNTSTELIIEPERPSSGRSRVSLSSFMDEQPDFSDESDVISALNYILPYFSEGNLEDAESTLLPFIQLLFSNVAEADIPPGHLKTPTGDPSVKPESSISTYKTKLRQLRFLENLLDAEIQEKIDDVLRKEKAAMLIQSNVLSPQLRRHILREKLETARQQEKSLEEVESAEKRPPKVNRVLEGPRGIKKRHFREMRRQSPRGKENAQPLVENAARGSKLRGPSARELAQLHVAQRPGKLVANSLEKEALLLKERKAEVSSFLKQYSRGRPAASIHPEAPGKVKKKSKDLSNTLLVLEDANARVKNMKTSKTVSHPRKIYSFRNSHSPLLHRTAVPKKGQGFPGKISSYRSLFALRPPSSAVRSLINSPSLEASSPSGEPSSQEKPSPQSFSPSEPSTENVISENNTPQVVFEELTTASGTTTLSGTLPASTAQSTLPSGYSAVPADNVMPTDQHTHKIQWEYHGVGTDVASKPTSFIAPGVPSPGTQFEAQLNQQLQSLIPNNDVRGLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKVSKAEWDTDQWKTENYINENTEAQGEQKESSELPKEVPGYGYNNKLILAISVTVVVMLLIVIFCLIEVCSRKRALREGNVGRKRGFFGFLLRKRRSGESESEREGFFWRRRPLWLQDMYRPLNATRKKNMAQKLHDKESSDEEEVLHAGAGEVSEAPADAVLTIESDVEDLGEESDAAPEVPPSEPRPGSGRLHVCV", "length": 862, "header": "tr|A0A286ZIV7-1|A0A286ZIV7_PIG Isoform 1 of LRRC37A/B like protein 1 C-terminal domain-containing protein OS=Sus scrofa OX=9823 GN=LOC102158372 PE=4 SV=3 CANONICAL=A0A286ZIV7-1" }, "locus": { "chromosome": "AEMK02000439.1", "start_pos": 52947, "end_pos": 33710, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058811.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058811.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031487.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031487.3" } ] } }, { "isoform_ac": "F1RRQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV7/entry#F1RRQ6-1", "sequence": { "sequence": "MQFLHKLVLSHNPLTTVEDSYLYKLPALRYLDLGTTQVSLTTVESILMMTLELEKLILPSHMACCLCQFKNSIEVVCKTVKLHCDRCLQNSARCDKETSLGHAEGSFMKVLQARKKNTSTELIIEPERPSSGRSRVSLSSFMDEQPDFSDESDVISALNYILPYFSEGNLEDAESTLLPFIQLLFSNVAEADIPPGHLKTPTGDPSVKPESSISTYKTKLRQLRFLENLLDAEIQEKIDDVLRKEKAAMLIQSNVLSPQLRRHILREKLETARQQEKSLEEVESAEKRPPKVNRVLEGPRGIKKRHFREMRRQSPRGKENAQPLVENAARGSKLRGPSARELAQLHVAQRPGKLVANSLEKEALLLKERKAEVSSFLKQYSRGRPAASIHPEAPGKVKKKSKDLSNTLLVLEDANARVKNMKTSKTVSHPRKIYSFRNSHSPLLHRTAVPKKGQGFPGKISSYRSLFALRPPSSAVRSLINSPSLEASSPSGEPSSQEKPSPQSFSPSEPSTENVISENNTPQVVFEELTTASGTTTLSGTLPASTAQSTLPSGYSAVPADNVMPTDQHTHKIQWEYHGVGTDVASKPTSFIAPGVPSPGTQFEAQLNQQLQSLIPNNDVRGLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKVSKAEWDTDQWKTENYINENTEAQGEQKESSELPKEVPGYGYNNKLILAISVTVVVMLLIVIFCLIEVCSRKRALREGNVGRKRGFFGFLLRKRRSGESESEGFFWRRRPLWLQDMYRPLNATRKKNMAQKLHDKESSDEEEVLHAGAGEVSEAPADAVLTIESDVEDLGEESDAAPEVPPSEPRPGSGRLHVCV", "length": 860, "header": "tr|F1RRQ6-1|F1RRQ6_PIG Computationally mapped isoform of LRRC37A/B like protein 1 C-terminal domain-containing protein OS=Sus scrofa OX=9823 GN=LOC102158372 PE=4 SV=5 CANONICAL=A0A286ZIV7-1" }, "locus": { "chromosome": "AEMK02000439.1", "start_pos": 52947, "end_pos": 33710, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018860.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018860.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018357.5", "url": "https://www.ensembl.org/id/ENSSSCP00000018357.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZIV7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102158372", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102158372", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" }, { "start_pos": 519, "end_pos": 521, "annotation": "n_glycosylation_sequon" }, { "start_pos": 788, "end_pos": 790, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZIV7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 862, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZIV7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZIV7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZIV7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIV7" }, { "id": "PF14914", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14914" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LRRC37A/B like protein 1 C-terminal", "eco_id": "ECO_0000259", "start_pos": 598, "end_pos": 740, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 117, "end_pos": 119 }, { "start_pos": 519, "end_pos": 521 }, { "start_pos": 788, "end_pos": 790 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZJ19-1", "uniprot_ac": "A0A286ZJ19", "uniprot_id": "A0A286ZJ19_PIG", "mass": { "chemical_mass": 85909.0, "monoisotopic_mass": 85909.0 }, "refseq": { "ac": "NP_001193848", "name": "microprocessor complex subunit DGCR8 isoform 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001193848" }, "gene_names": [ { "name": "DGCR8", "type": "recommended", "evidence": [ { "id": "A0A286ZJ19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ] }, { "name": "DGCR8", "type": "synonym", "evidence": [ { "id": "NP_001193848", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001193848" } ] } ], "protein_names": [ { "name": "Microprocessor complex subunit DGCR8", "type": "recommended", "evidence": [ { "id": "A0A286ZJ19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19/entry#names_and_taxonomy" } ] }, { "name": "DiGeorge syndrome critical region gene 8", "type": "synonym", "evidence": [ { "id": "NP_001193848", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001193848" } ] }, { "name": "microprocessor complex subunit DGCR8 isoform 2", "type": "synonym", "evidence": [ { "id": "NP_001193848", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001193848" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DGCR8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19", "locus": { "chromosome": "14", "start_pos": 51489529, "end_pos": 51469178, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010135", "url": "https://www.ensembl.org/id/ENSSSCG00000010135" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010135", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010135", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00201", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00201", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd19867", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19867", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd19868", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19868", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100616094", "url": "https://www.ncbi.nlm.nih.gov/gene/100616094", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001202", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001202", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014720", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014720", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040375", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040375", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100616094", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100616094", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PKKEWIM", "url": "https://omabrowser.org/oma/group/PKKEWIM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZJ19", "url": "https://www.orthodb.org/?gene=A0A286ZJ19", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13482", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13482", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13482:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13482:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00035", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00035", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001193848", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001193848", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJ19-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1MPF0", "url": "https://www.uniprot.org/uniprotkb/A0A8D1MPF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1MPF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1MPF0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RHN0", "url": "https://www.uniprot.org/uniprotkb/F1RHN0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RHN0-1", "url": "https://www.uniprot.org/uniprotkb/F1RHN0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METCESPCPLPREPAGGAVMENPACPLPALPHGQSPPPPLQTSSDAEVMDVGSGGDGQAEPPAEDPLDFYGASLLSKGSFSKARLLVDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLFTGAERDARAECTLALSPVSGDVHACPFGGSIGNGVGIGSESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGTGGFTAKAIVQRDRVDEEALNFSYEDDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDSEEREQNRELAPGGEVSPAKPPGRSAELELPMEEPDSLGADSGPPDEKDTLGAEAAPGALGQVKAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQFARKNKPNLHILSKLQEEMRRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV", "length": 773, "header": "tr|A0A286ZJ19-1|A0A286ZJ19_PIG Isoform 1 of Microprocessor complex subunit DGCR8 OS=Sus scrofa OX=9823 GN=DGCR8 PE=4 SV=1 CANONICAL=A0A286ZJ19-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJ19-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19/entry#A0A286ZJ19-1", "sequence": { "sequence": "METCESPCPLPREPAGGAVMENPACPLPALPHGQSPPPPLQTSSDAEVMDVGSGGDGQAEPPAEDPLDFYGASLLSKGSFSKARLLVDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLFTGAERDARAECTLALSPVSGDVHACPFGGSIGNGVGIGSESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGTGGFTAKAIVQRDRVDEEALNFSYEDDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDSEEREQNRELAPGGEVSPAKPPGRSAELELPMEEPDSLGADSGPPDEKDTLGAEAAPGALGQVKAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQFARKNKPNLHILSKLQEEMRRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV", "length": 773, "header": "tr|A0A286ZJ19-1|A0A286ZJ19_PIG Isoform 1 of Microprocessor complex subunit DGCR8 OS=Sus scrofa OX=9823 GN=DGCR8 PE=4 SV=1 CANONICAL=A0A286ZJ19-1" }, "locus": { "chromosome": "14", "start_pos": 51487981, "end_pos": 51473817, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058372.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058372.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031547.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031547.1" } ] } }, { "isoform_ac": "A0A8D1MPF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19/entry#A0A8D1MPF0-1", "sequence": { "sequence": "METCESPCPLPREPAGGAVMENPACPLPALPHGQSPPPPLQTSSDAEVMDVGSGGDGQAEPPAEDPLDFYGASLLSKGSFSKARLLVDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLFTGAERDARAECTLALSPVSGDVHACPFGGSIGNGVGIGSESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGTGGFTAKAIVQRDRVDEEALNFSYEDDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDSEEREQNRELAPGGEVSPAKPPGRSAELELPMEEPDSLGADSGPPDEKDTLGAEAAPGALGQVKAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQFARKNKPNLHILSKLQEEMRRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV", "length": 740, "header": "tr|A0A8D1MPF0-1|A0A286ZJ19_PIG Computationally mapped isoform of Microprocessor complex subunit DGCR8 OS=Sus scrofa OX=9823 GN=DGCR8 PE=4 SV=1 CANONICAL=A0A286ZJ19-1" }, "locus": { "chromosome": "14", "start_pos": 51487981, "end_pos": 51473817, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052126.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052126.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056357.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056357.2" } ] } }, { "isoform_ac": "F1RHN0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19/entry#F1RHN0-1", "sequence": { "sequence": "METCESPCPLPREPAGGAVMENPACPLPALPHGQSPPPPLQTSSDAEVMDVGSGGDGQAEPPAEDPLDFYGASLLSKGSFSKARLLVDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLFTGAERDARAECTLALSPVSGDVHACPFGGSIGNGVGIGSESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGTGGFTAKAIVQRDRVDEEALNFSYEDDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDSEEREQNRELAPGGEVSPAKPPGRSAELELPMEEPDSLGADSGPPDEKDTLGAEAAPGALGQVKAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWYPPWTCLPPSRNLHSPGHLLDTPCPHPCPAGCPLCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQFARKNKPNLHILSKLQEEMRRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV", "length": 807, "header": "tr|F1RHN0-1|F1RHN0_PIG Computationally mapped isoform of Microprocessor complex subunit DGCR8 OS=Sus scrofa OX=9823 GN=DGCR8 PE=4 SV=2 CANONICAL=A0A286ZJ19-1" }, "locus": { "chromosome": "14", "start_pos": 51487981, "end_pos": 51473817, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011096.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011096.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010808.3", "url": "https://www.ensembl.org/id/ENSSSCP00000010808.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1MPF0", "url": "https://www.uniprot.org/uniprotkb/A0A8D1MPF0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100616094", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100616094", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5PPX8-1", "protein_name": "Microprocessor complex subunit DGCR8", "gene_name": "DGCR8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEKYENVPPLPKEPAREMNVENHTCPPPLPPNEQPPPPPLQTSSDAEVMDVGSGGDGQSDTPAGDTHSICRTQLLTKGSACYKSRLIIDPNNSDQSPRTARHAPSVRKFTPDLKLLKDVKISVSFTESCKSKDRKVLYTGIEQDYKADTDFGINNVNGDLHVCPFGGSNGKAVGIGGENDDKKDDENDVDQEKRVEYAVLDELEDFTDNLMEIDEEGGGFTSKAIVQRDKVDEETMNYSYEDDFDNDVDALLEEGLRAPKTRRVENEKYGGESDHQSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGIPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLTSIPCLHYKKMKENEEREQNNDITPNGEVSPIKHIDKSSELDCQTEEPDSTAADSGPLDEKDTSGGDAAQGALGQVKAKVEVCKDESVDLEDFRRYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVIIDGVTYGAGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVIPGKNQKSEYVMTCGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQYAKKNKPNLHILNKLQEEMKKLAQEREETRKKPKMTIVESAQPGSEPLCTVDV", "length": 775 }, "evidence": [ { "id": "A0A286ZJ19", "url": "https://omabrowser.org/oma/group/A0A286ZJ19/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A2G4-1", "protein_name": "Microprocessor complex subunit DGCR8", "gene_name": "Dgcr8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METYESPSPLPHEPTGEAMMENRACPFQVLPHEQSPPPPLQTSSDAEVMDVGSGGDGQSEPPADDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLYTGVERSTRPECSQLLSPVCGDVHACPFGGSVGNGVGLGGESTDKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGTGGFTANAIVQRDRVDEEALNFSYEDDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSCDLAPSGEVSPVKPLGRSAELDFPLEEPDSLGGDSGSLDEKDPLGAEAAAGALGQVRAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQYAKKNRPNLHILSKLQEEMKRLAAEREETRKKPKMSIVASAQPGGEPLCTVDV", "length": 773 }, "evidence": [ { "id": "A0A286ZJ19", "url": "https://omabrowser.org/oma/group/A0A286ZJ19/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8WYQ5-1", "protein_name": "Microprocessor complex subunit DGCR8", "gene_name": "DGCR8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METDESPSPLPCGPAGEAVMESRARPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSELPAEDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLYTGAERDVRAECGLLLSPVSGDVHACPFGGSVGDGVGIGGESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGAGGFTAKAIVQRDRVDEEALNFPYEDDFDNDVDALLEEGLCAPKKRRTEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQSSDLTPSGDVSPVKPLSRSAELEFPLDEPDSMGADPGPPDEKDPLGAEAAPGALGQVKAKVEVCKDESVDLEEFRSYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQYAKKNKPNLHILSKLQEEMKRLAEEREETRKKPKMSIVASAQPGGEPLCTVDV", "length": 773 }, "evidence": [ { "id": "A0A286ZJ19", "url": "https://omabrowser.org/oma/group/A0A286ZJ19/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9EQM6-1", "protein_name": "Microprocessor complex subunit DGCR8", "gene_name": "Dgcr8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METYESPSPLPREPAGEAMMENRACPFQVLPHEQSPPPPLQTSSDAEVMDVGSGGDGQSEPPADDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKISVSFTESCRSKDRKVLYTGVERSTRPECGQLLSPVSGDVHACPFGGSVGNGVGLGGESADKKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGTGGFTAKAIVQRDRVDEEALNFSYEDDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKDNEEREQNCDLAPSGEVSPVKPLGRSAELDFPLEEPDSMGGDSGSMDEKDPLGAEAAAGALGQVKAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQYAKKNRPNLHILSKLQEEMKRLAAEREETRKKPKMSIVASAQPGGEPLCTVDV", "length": 773 }, "evidence": [ { "id": "A0A286ZJ19", "url": "https://omabrowser.org/oma/group/A0A286ZJ19/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9V9V7-1", "protein_name": "Partner of drosha, isoform A", "gene_name": "pasha", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAEKPLADCPDSGQVRKRPRLEDEEQELKVAGFSLSAIEEMRRTRDNELQNEPMDQQLRQFQVLDEVGSGSDEDDESDNASEQQGGRYGEGGDEEEEAADGDGEEYDSSEFDDDEIENLLDEKLPEELRESKQPKYEQRFKTVLEEKRLNHFEVLPEGWVQVTHNSGMPLFLHRKTRVCCASRPYFLGTGSARKHAVPLGAIPCLNYRRALEEESEVEQQKTDGAPPVAVCPMAGASALPAEAMDVEGKENNEGSTDSKTQPDGITALMPAAKIVTVNENTQKESITPEQLNTYCQKLFKFKVIRVLRFRSWNARRKFTKNRKHIKNIQRPTLPDGTKLIKFPILANAGEGSTNPRGRKEWIMNPNGKSFVCILHEYVQHALKTQPTYEFKELQNAATPYSATVSVNNLKYGTGYGTSKKQAKSEAARETLEILIPDVKDKITGNNKDQKSGTAKKAQSDLSVFDDIRIEDPRVTEFCNKTTEPSPNAILLTCLQRNYGSDVQISQEINRTANNKNEFTMTVGKHTAKVVCKNKREGKQLASQAILQILHPHIQTWGSLLRLYGNNSIKTFKEKKLEEQEITVLQSKAAVNQPNYAILDKLKSEMLKLCAKQESVLTMGTFVPPSDVDLPTSSGSNLNNVEL", "length": 642 }, "evidence": [ { "id": "A0A286ZJ19", "url": "https://omabrowser.org/oma/group/A0A286ZJ19/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "microprocessor complex", "id": "GO:0070877", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070877", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 8, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "double-stranded RNA binding", "id": "GO:0003725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003725", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "heme binding", "id": "GO:0020037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0020037", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "primary miRNA binding", "id": "GO:0070878", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070878", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "protein-RNA adaptor activity", "id": "GO:0140517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140517", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "primary miRNA processing", "id": "GO:0031053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031053", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" }, { "name": "positive regulation of pre-miRNA processing", "id": "GO:2000633", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000633", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 236, "end_pos": 238, "annotation": "n_glycosylation_sequon" }, { "start_pos": 90, "end_pos": 92, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZJ19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" }, { "id": "PS50137", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50137" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DRBM", "eco_id": "ECO_0000259", "start_pos": 511, "end_pos": 578, "start_aa": "Ser", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZJ19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ19" }, { "id": "PS50020", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50020" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "WW", "eco_id": "ECO_0000259", "start_pos": 301, "end_pos": 334, "start_aa": "Glu", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], 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"https://www.ebi.ac.uk/interpro/entry/IPR020837", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036056", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036056", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037579", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037579", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CQHAKDA", "url": "https://omabrowser.org/oma/group/CQHAKDA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZJ76", "url": "https://www.orthodb.org/?gene=A0A286ZJ76", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47221", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47221", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47221:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47221:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00147", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00147", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005667844", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667844", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZJ76", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJ76-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ76-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQKDVIHAHCKMKALIWTLSVLFFLLMGIGQCRGGQFKIKKITQRRYPRATDGKEEVKKCAYTFLVPEQKITGPICVNTKGQDAGTIKDMITRMDLENLKDVLSRQKREIDVLQLVVDVDGNIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNSLELSQLENKILNVTTEMLKMATRYRELEVKYASLTDLVNNQSVMITLLEEQCLRIFSRQDPHLSPPLVQVVPQHIPNSHQYTPGLLGGNEIQRDPGYPRDLMPPPDLATPPTKSPFKIPPVTFINEGPFKDCQHAKEAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWENYKKGFGNTDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLRLGTYQGNAGDSMMWHNGKQFTTLDRDKDMYAGNCAHFHKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGIFWAEYRGGSYSLRAVQMMIKPID", "length": 502, "header": "tr|A0A286ZJ76-1|A0A286ZJ76_PIG Isoform 1 of Angiopoietin like 1 OS=Sus scrofa OX=9823 GN=ANGPTL1 PE=4 SV=1 CANONICAL=A0A286ZJ76-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJ76-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ76/entry#A0A286ZJ76-1", "sequence": { "sequence": "MQKDVIHAHCKMKALIWTLSVLFFLLMGIGQCRGGQFKIKKITQRRYPRATDGKEEVKKCAYTFLVPEQKITGPICVNTKGQDAGTIKDMITRMDLENLKDVLSRQKREIDVLQLVVDVDGNIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNSLELSQLENKILNVTTEMLKMATRYRELEVKYASLTDLVNNQSVMITLLEEQCLRIFSRQDPHLSPPLVQVVPQHIPNSHQYTPGLLGGNEIQRDPGYPRDLMPPPDLATPPTKSPFKIPPVTFINEGPFKDCQHAKEAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWENYKKGFGNTDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLRLGTYQGNAGDSMMWHNGKQFTTLDRDKDMYAGNCAHFHKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGIFWAEYRGGSYSLRAVQMMIKPID", "length": 502, "header": "tr|A0A286ZJ76-1|A0A286ZJ76_PIG Isoform 1 of Angiopoietin like 1 OS=Sus scrofa OX=9823 GN=ANGPTL1 PE=4 SV=1 CANONICAL=A0A286ZJ76-1" }, "locus": { "chromosome": "9", "start_pos": 120680094, "end_pos": 120657765, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048003.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048003.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031577.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031577.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 268, "start_aa": "Thr", "end_pos": 268, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr268", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ76", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ76" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K603-1", "protein_name": "Angiopoietin-like 1", "gene_name": "Angptl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTFVWILSVVLFLLGIGHCKGGQFKIKKTTQRRYPRATDGKEETKKCSYTFLVPEQKITGPICVNTKGQDAGTIKDMITRMDLENLKDVLSRQKREIDVLQLVVDVDGNIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNSLELSQLENKILNVTTEMLKMATRYRELEVKYASLTDLVNNQSVMITVLEEQCLRLFSRQDPHVSPPLVQVVPRHIPNSHQDTPGLLAGNEIQRDPGYPRDLMPPPDLATAPTKSPFKIPAVTFINEGPFKDCQQAKEAGHSASGIYMIKPENSHGPVQLWCENSLDPGGWTVIQKRTDGSVNFFRNWENYKKGFGNIDGEYWLGLDNIYKLSNQDNYKLMIELEDWSEKKVYAEYSSFRLEPESDYYRLRLGTYQGNAGDSMMWHNGKQFTTLDRDKDMYTGNCAHFHKGGWWYNACAHSNLNGVWYRGGHYRSKHQDGIFWAEYRGGSYSLRAVQMMVKPID", "length": 490 }, "evidence": [ { "id": "A0A286ZJ76", "url": "https://omabrowser.org/oma/group/A0A286ZJ76/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O95841-1", "protein_name": "Angiopoietin-related protein 1", "gene_name": "ANGPTL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKTFTWTLGVLFFLLVDTGHCRGGQFKIKKINQRRYPRATDGKEEAKKCAYTFLVPEQRITGPICVNTKGQDASTIKDMITRMDLENLKDVLSRQKREIDVLQLVVDVDGNIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNSLELSQLENKILNVTTEMLKMATRYRELEVKYASLTDLVNNQSVMITLLEEQCLRIFSRQDTHVSPPLVQVVPQHIPNSQQYTPGLLGGNEIQRDPGYPRDLMPPPDLATSPTKSPFKIPPVTFINEGPFKDCQQAKEAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWENYKKGFGNIDGEYWLGLENIYMLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLRLGTYQGNAGDSMMWHNGKQFTTLDRDKDMYAGNCAHFHKGGWWYNACAHSNLNGVWYRGGHYRSKHQDGIFWAEYRGGSYSLRAVQMMIKPID", "length": 491 }, "evidence": [ { "id": "A0A286ZJ76", "url": "https://omabrowser.org/oma/group/A0A286ZJ76/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1RMR1-1", "protein_name": "Angiopoietin-related protein 1", "gene_name": "ANGPTL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKAFIWTLSVLFFLLMGIGHGRGRQFKIKKITQRRYPRATDGKEDAKKCSYTFLVPEQKITGPICVNTKGQDAGTIKDMITRMDLENLKDVLSKQKREIDVLQLVVDVDGNIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNSLELSQLENKILNVTTEMLKMATRYRELEVKYASLTDLVNNQSVMITLLEEQCLRIFSRQDPHVSPPLVQVVPQHIPNSHQYTPGLLGGNEIQRDPGYPRDLMPPPDLVTSPTKSPLKIPPVTFINEGPYKDCQHAKDAGHSVSGIYMIKPENSNGPMQLWCENSLDPGGWTVIQKRTDGSVNFFRNWENYKKGFGNIDGEYWLGLENIYLLSNQDNYKLLIELEDWSDKKVYAEYSSFRLEPESEFYRLRLGTYQGNAGDSMMWHNGKQFTTLDRDKDMYAGNCAHFHKGGWWYNACAHSNLNGVWYRGGHYRSKYQDGIFWAEYRGGSYSLRAVQMLIKPID", "length": 491 }, "evidence": [ { "id": "A0A286ZJ76", "url": "https://omabrowser.org/oma/group/A0A286ZJ76/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q640P2-1", "protein_name": "Angiopoietin-related protein 1", "gene_name": "Angptl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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repressor 3 OS=Sus scrofa OX=9823 GN=SNAI3 PE=3 SV=1 CANONICAL=A0A286ZJ94-1" }, "locus": { "chromosome": "6", "start_pos": 994112, "end_pos": 989033, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041372.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041372.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031548.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031548.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 51, "start_aa": "Thr", "end_pos": 51, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr51", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], 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"ssc:110260883", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260883", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LCD7-1", "protein_name": "Snail family transcriptional repressor 3", "gene_name": "Snai3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTPATVPCNREHERQGQVDGQAPAGSVRDHDAGQPSPVGQTPPTTRRVPGPRTCPGRGFAAPPRRAPRWLAEVVRYANEPDPSRTCRLRCPRAPPDATLGVPPQALDSACSREGTMPRSFLVKTHSSHRVPNYGKLETLREANGSCSACEELVGSCHLPDKEASSNPSDPLQPWDSTSAIACVSLPLLPHHGETLGTSGPEPQETSLVGPRAGQAPSVTLKDSFNLPPVLVLPTRWPPILGSDGALDEHLRAEGTSRVPGSFECIHCHRPYQTLAGLARHQQLHCHLPTGCAFTCRYCDKEYASLGALKMHIRTHTLPCVCKVCGKAFSRPWLLQGHIRTHTGEKPYTCSHCSRAFADRSNLRAHLQTHAGTKKYSSACLLDLFQKGASIGK", "length": 392 }, "evidence": [ { "id": "A0A286ZJ94", "url": "https://omabrowser.org/oma/group/A0A286ZJ94/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BH01-1", "protein_name": "Snail family transcriptional 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"table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZJB6-1", "uniprot_ac": "A0A286ZJB6", "uniprot_id": "A0A286ZJB6_PIG", "mass": { "chemical_mass": 92839.0, "monoisotopic_mass": 92839.0 }, "refseq": {}, "gene_names": [ { "name": "KLHL29", "type": "recommended", "evidence": [ { "id": "A0A286ZJB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" } ] } ], "protein_names": [ { "name": "Kelch like family member 29", "type": "synonym", "evidence": [ { "id": "A0A286ZJB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJB6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLHL29", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6", "locus": { "chromosome": "3", "start_pos": 114871164, "end_pos": 115177466, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008593", "url": "https://www.ensembl.org/id/ENSSSCG00000008593" } ] } } ], "crossref": [ { "id": "A0A286ZJB6", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZJB6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008593", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008593", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18468", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18468", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056737", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056737", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "SHSYGMN", "url": "https://omabrowser.org/oma/group/SHSYGMN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45632", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45632", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45632:SF30", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45632:SF30", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24981", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24981", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZJB6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJB6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSRHHSRFERDYRVGWDRREWSANGTHGTTSICSATAGAGGSTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGSGEAITSLVASSASAVTTKAPGISKADNQSQGLTTSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWGTTVAAGSQPALIAHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSATLPSGAPATNGPPTSDSAHGLQMLRTIGVGKYEFTDPGHPKEMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQCGREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYISNDSLNTKAEELVYETVIKWIKKDPGSRAQYAAELLAVVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPDKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPATNTWTLLPTCPAPCSDTAAW", "length": 866, "header": "tr|A0A286ZJB6-1|A0A286ZJB6_PIG Isoform 1 of Kelch like family member 29 OS=Sus scrofa OX=9823 GN=KLHL29 PE=4 SV=1 CANONICAL=A0A286ZJB6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJB6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6/entry#A0A286ZJB6-1", "sequence": { "sequence": "MSRHHSRFERDYRVGWDRREWSANGTHGTTSICSATAGAGGSTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGSGEAITSLVASSASAVTTKAPGISKADNQSQGLTTSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWGTTVAAGSQPALIAHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSATLPSGAPATNGPPTSDSAHGLQMLRTIGVGKYEFTDPGHPKEMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQCGREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYISNDSLNTKAEELVYETVIKWIKKDPGSRAQYAAELLAVVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPDKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPATNTWTLLPTCPAPCSDTAAW", "length": 866, "header": "tr|A0A286ZJB6-1|A0A286ZJB6_PIG Isoform 1 of Kelch like family member 29 OS=Sus scrofa OX=9823 GN=KLHL29 PE=4 SV=1 CANONICAL=A0A286ZJB6-1" }, "locus": { "chromosome": "3", "start_pos": 115008393, "end_pos": 114873267, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044456.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044456.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031544.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031544.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 186, "start_aa": "Thr", "end_pos": 186, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr186", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 250, "start_aa": "Thr", "end_pos": 250, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr250", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 65, "start_aa": "Thr", "end_pos": 65, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr65", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJB6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y2Y7-1", "protein_name": "Kelch like family member 29", "gene_name": "KLHL29", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSWLRTLSQCVASCNLASQKPPAKCKDLLSCLLTITPEADFDTHSGYHRARSRVPCEQKLPCIEMSRHHSRFERDYRAGWDRRDWSSNGNHVSSTNCSSAASTNSNNRPGLLPLPIVPSRLPTPATATCTTVSSDVITSLVANSSPASTTKTPCISKTENQPQGLATSVRWGQTPINQSTPWDTDEPPSKQMRENENPGAAPWVTTVAAGSQPALITHSYGMTQPPTFSPAANVQAPVIGVTPSLPPHVTPQLPLMPAHYQLQPQPSQPLSNMVVNLQSQPLYTNSQPLSMSSMSGVGPVAHPSPGVVGNGHLACPMLPPPPPALPSAALPSNAPTTNGQVAAPLPPNAAVGPDNTNGVQMLRTIGVGKYEFTDPWHPKEMLKELNQQRRAKEFTDLKIIVEGKEFEVHQNVLASCSLYFKDLIKRSPRDSSRSGEKLELAMSNLTADVLELLLEFVYTGSLIIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGILAMAEAMQCTELYNMAKAYALQIFPEVANQEEILNISKDDFISYMSNDSLNTKAEELVYETVIKWIKKDAAIRAQYAAELLAVVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMIGMNQRALTAVTCLNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTIGGVGVAGNVDHVERYDTITNQWETIAPLPKAVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYIPQTNSWSFIESPMIDNKYAPAVTLNGFIFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYDPKTNTWTLLPNMPCPVFRHGCVVIKKYIQSG", "length": 940 }, "evidence": [ { "id": "A0A286ZJB6", "url": "https://omabrowser.org/oma/group/A0A286ZJB6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7H495-1", "protein_name": "Kelch-like protein 29", "gene_name": "Klhl29", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSRHHSRFERDYRVGWDRREWSVNGTHGATSVCSVTSGAGGGTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGSNDAITSLVASSASAVTTKAPGISKADNQSQGLTTSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPSLIAHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLMPPPPPAQPSAALPSSAPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKEMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQGSREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPAARAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKVYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG", "length": 875 }, "evidence": [ { "id": "A0A286ZJB6", "url": "https://omabrowser.org/oma/group/A0A286ZJB6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4AEF4-1", "protein_name": "Kelch-like family member 29", "gene_name": "Klhl29", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRHHSRFERDYRVGWDRREWSVNGTHGATSVCSVTSGAGGGTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGNSEAITSLVASSASAVTTKAPGISKADNQSQGLTTSIRWGQTPVNQSTPWDTDEPPSKQMREGDNPGTGPWVTTVAAGNQPSLIAHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSAALPSSVPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKEMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQGSREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPATRAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG", "length": 875 }, "evidence": [ { "id": "A0A286ZJB6", "url": "https://omabrowser.org/oma/group/A0A286ZJB6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MN31-1", "protein_name": "Kelch like family member 29", "gene_name": "KLHL29", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRHHSRFERDYRVGWDRREWSANGTHGTTSICSATAGAGGSSASSLSARPGLLPLPVVPSRLPTPATAPTPCTTGSGEAITSLVASSAPATTTKAPGISKADNQSQGLTTSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGSQPALISHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPLPAQPSATLPSVAPATNGPPTSESAHGLQMLRTIGVGKYEFTDPGHPKEMLKELNQQRRVKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQCGREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYISNDSLNTKAEELVYETVIKWIKKDPVSRAQYAAELLAVVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPDKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPATNTWTLLPHMPCPVFRHGCVVIKKYIQSG", "length": 875 }, "evidence": [ { "id": "A0A286ZJB6", "url": "https://omabrowser.org/oma/group/A0A286ZJB6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q80T74-1", "protein_name": "Kelch-like protein 29", "gene_name": "Klhl29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSRHHSRFERDYRIGWDRREWSVNGTHGATSVCSVTSGAGGSTASSLSARPGLLPLPVVPSRLPTPATAPAPCTTGSSEAITSLVVSSASAATTKAPGISKADNQSQGLTTSIRWGQTPVNQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPSLITHSYGVTQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLIPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVSRPGPTPVGNGHMAGPLLPPPPPAQPSAALPSSVPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPKEMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDSSQSSREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPATRAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG", "length": 875 }, "evidence": [ { "id": "A0A286ZJB6", "url": "https://omabrowser.org/oma/group/A0A286ZJB6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96CT2-1", "protein_name": "Kelch-like protein 29", "gene_name": "KLHL29", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSRHHSRFERDYRVGWDRREWSVNGTHGTTSICSVTSGAGGGTASSLSVRPGLLPLPVVPSRLPTPATAPAPCTTGSSEAITSLVASSASAVTTKAPGISKGDSQSQGLATSIRWGQTPINQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPTLIAHSYGVAQPPTFSPAVNVQAPVIGVTPSLPPHVGPQLPLMPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPGVGQVARPGPTAVGNGHMAGPLLPPPPPAQPSATLPSGAPATNGPPTTDSAHGLQMLRTIGVGKYEFTDPGHPREMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDSGQGGREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVIKWIKKDPATRTQYAAELLAVVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFVFILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG", "length": 875 }, "evidence": [ { "id": "A0A286ZJB6", "url": "https://omabrowser.org/oma/group/A0A286ZJB6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJB6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJB6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJB6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJB6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 121, "end_pos": 123, "annotation": "n_glycosylation_sequon" }, { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" }, { "start_pos": 486, "end_pos": 488, "annotation": "n_glycosylation_sequon" }, { "start_pos": 808, "end_pos": 810, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZJB6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 866, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZJB6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZJB6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZJB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJB6" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 329, "end_pos": 401, "start_aa": "Thr", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 65, 186, 250 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 104, "end_pos": 106 }, { "start_pos": 121, "end_pos": 123 }, { "start_pos": 24, "end_pos": 26 }, { "start_pos": 486, "end_pos": 488 }, { "start_pos": 808, "end_pos": 810 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": 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"total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZJC9-1", "uniprot_ac": "A0A286ZJC9", "uniprot_id": "A0A286ZJC9_PIG", "mass": { "chemical_mass": 189221.0, "monoisotopic_mass": 189221.0 }, "refseq": {}, "gene_names": [ { "name": "SORBS1", "type": "recommended", "evidence": [ { "id": "A0A286ZJC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9" } ] } ], "protein_names": [ { "name": "Sorbin and SH3 domain containing 1", "type": "synonym", "evidence": [ { "id": "A0A286ZJC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJC9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SORBS1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9", "locus": { "chromosome": "14", "start_pos": 106895765, "end_pos": 107137561, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010494", "url": "https://www.ensembl.org/id/ENSSSCG00000010494" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010494", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010494", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11916", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11916", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11919", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11919", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11922", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11922", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003127", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003127", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035606", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035606", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035610", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035610", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050384", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050384", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR14167", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14167", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14167:SF64", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14167:SF64", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00018", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00018", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02208", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02208", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07653", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07653", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14604", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14604", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-445355", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-445355", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZJC9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJC9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJT5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJT5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJT5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AGR3", "url": "https://www.uniprot.org/uniprotkb/A0A287AGR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AGR3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGR3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B1M9", "url": "https://www.uniprot.org/uniprotkb/A0A287B1M9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B1M9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B1M9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6S0", "url": "https://www.uniprot.org/uniprotkb/A0A287B6S0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6S0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6S0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BFA3", "url": "https://www.uniprot.org/uniprotkb/A0A287BFA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BFA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BFA3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BG44", "url": "https://www.uniprot.org/uniprotkb/A0A287BG44", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BG44-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BG44-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPJ8", "url": "https://www.uniprot.org/uniprotkb/A0A287BPJ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPJ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPW9", "url": "https://www.uniprot.org/uniprotkb/A0A287BPW9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPW9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSRGWAVRRFLTSHWRTRPFLSRPGLAPPPTTARRPGAAGVDSSRRMLMRGRPPQPIGRSRSVGEVSLESQKNRAGPTAACSASGAGRAQPARPPGDPQGVAFVGRVCETFSARSSRTNASFHHLEPLSSAEPQFQKTCPAATMSSECDVGASKAVVNGLALGSNGRDKATADPFRARSISAVKIIPVKTVKNSSGLVLPPDTDPTKICTGKGAVTLRASSSYREIPSGSPVSPREAPQQERKADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNREQQKRLSSLSDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQNSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMTNLEKDLNLCPTELEADLGKTEPLTKAPSANLSQVLPSFSPALSLIPFAFLPVPCIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKVDRKGGNAHIISSSSVHSRAGHTSSVLGPGCKHKKPLSAAKACISEILPSKFKPRLSAPSALLQDQKSILLPSEKAQSYENLCVSVSLGDSKRGLPLQVGGSVENLLMRSRRDYDGKLGSTMSLQEYSTGSRRPCPLSRRAGSQFTVLYRDMHHINRAGLSLGSVSSSSVRDLASHFERSGLALSRGELGPSQEGSENIPKHTVSSRITAFEQLIQRSRSMPSLDLSGRLSKSPTPALARGGLTSARSAESLLESTKLRPREVVEGLSPEGLYASPICSRMADPTLGFRGLMPSEPLSTCSDELDRCSNISSDSREGSSSSVHGDFPKHRLNKCKGTCPASYTRFTTIRRHEQQQTCRRPDWRPDPRGDKATLLRNIYLMSPLPFRLKKPLQHPPRQPCSGDFSGQKAEPPSQPHLDEPPSGEKPSVPKRLSSRHTMARLSRTSEAPQERPSAPEVCPRAFSNGNSMSYPDHGLDRNNNPQSELGTSLGDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQFPGHSKLLVPAPTSLPHPHRALSPEMHAVTAEWISLTVGVPSRRSLALTPPLPPLPETSVYSTDPLASLARPSPSLSLSLPTSSWSDWSTPHAVGSPLALPPPHKACSLVPGAQASLHINGDSSTHMAPPGLRQDSFSQLQLGRSDKVISELSDAFSSQGKRQPWREESGARDREAGERCLGGPAISKKSCLRPSDVVRCLSSEQRFPELHAPEESWPRRPLGGPLPGREAEHPELHRGGEPAKRKAARTGASQQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1722, "header": "tr|A0A286ZJC9-1|A0A286ZJC9_PIG Isoform 1 of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=3 CANONICAL=A0A286ZJC9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJC9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A286ZJC9-1", "sequence": { "sequence": "MSRGWAVRRFLTSHWRTRPFLSRPGLAPPPTTARRPGAAGVDSSRRMLMRGRPPQPIGRSRSVGEVSLESQKNRAGPTAACSASGAGRAQPARPPGDPQGVAFVGRVCETFSARSSRTNASFHHLEPLSSAEPQFQKTCPAATMSSECDVGASKAVVNGLALGSNGRDKATADPFRARSISAVKIIPVKTVKNSSGLVLPPDTDPTKICTGKGAVTLRASSSYREIPSGSPVSPREAPQQERKADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNREQQKRLSSLSDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQNSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMTNLEKDLNLCPTELEADLGKTEPLTKAPSANLSQVLPSFSPALSLIPFAFLPVPCIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKVDRKGGNAHIISSSSVHSRAGHTSSVLGPGCKHKKPLSAAKACISEILPSKFKPRLSAPSALLQDQKSILLPSEKAQSYENLCVSVSLGDSKRGLPLQVGGSVENLLMRSRRDYDGKLGSTMSLQEYSTGSRRPCPLSRRAGSQFTVLYRDMHHINRAGLSLGSVSSSSVRDLASHFERSGLALSRGELGPSQEGSENIPKHTVSSRITAFEQLIQRSRSMPSLDLSGRLSKSPTPALARGGLTSARSAESLLESTKLRPREVVEGLSPEGLYASPICSRMADPTLGFRGLMPSEPLSTCSDELDRCSNISSDSREGSSSSVHGDFPKHRLNKCKGTCPASYTRFTTIRRHEQQQTCRRPDWRPDPRGDKATLLRNIYLMSPLPFRLKKPLQHPPRQPCSGDFSGQKAEPPSQPHLDEPPSGEKPSVPKRLSSRHTMARLSRTSEAPQERPSAPEVCPRAFSNGNSMSYPDHGLDRNNNPQSELGTSLGDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQFPGHSKLLVPAPTSLPHPHRALSPEMHAVTAEWISLTVGVPSRRSLALTPPLPPLPETSVYSTDPLASLARPSPSLSLSLPTSSWSDWSTPHAVGSPLALPPPHKACSLVPGAQASLHINGDSSTHMAPPGLRQDSFSQLQLGRSDKVISELSDAFSSQGKRQPWREESGARDREAGERCLGGPAISKKSCLRPSDVVRCLSSEQRFPELHAPEESWPRRPLGGPLPGREAEHPELHRGGEPAKRKAARTGASQQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1722, "header": "tr|A0A286ZJC9-1|A0A286ZJC9_PIG Isoform 1 of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=3 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107137454, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048338.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048338.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031685.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031685.3" } ] } }, { "isoform_ac": "A0A286ZJT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A286ZJT5-1", "sequence": { "sequence": "MSSECDVGASKAVVNGLALGSNGRDKATADPFRARSISAVKIIPVKTVKNSSGLVLPPDTDPTKICTGKGAVTLRASSSYREIPSGSPVSPREAPQQERKADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDAISSPAQPEVIVVPLYLVNTDRGHEGTDRPPASRGPRGPPAPATAPAGSPLTFPTLDDFIPPHLQRRPQHSQPASAPGSFPPVSQTPPSLSPPPPLVPPVPEGLRRVSEPDRTGAVSSTDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNREQQKRLSSLSDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQNSEEDNPYTPTYQFPASTPSPKSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMSRDISPEEIDLKNEPWYKFFSELEFGKPPPKKIWDYTPGDCSILPREDRKVIPLCLLPIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQFPGHSKLLVPAPTSLPHPHRALSPEMHAVTAEWISLTVGVPSRRSLALTPPLPPLPETSVYSTDPLASLARPSPSLSLSLPTSSWSDWSTPHAVGSPLALPPPHKACSLVPGAQASLHINGDSSTHMAPPGLRQDSFSQLQLGRSDKVISELSDAFSSQGKRQPWREESGARDREAGERCLGGPAISKKSCLRPSDVVRCLSSEQRFPELHAPEESWPRRPLGGPLPGREAEHPELHRGGEPAKRKAARTGASQPSHHSLRAGPDLTESEKSYVQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1254, "header": "tr|A0A286ZJT5-1|A0A286ZJT5_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=2 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107019528, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053467.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053467.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031729.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031729.2" } ] } }, { "isoform_ac": "A0A287AGR3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A287AGR3-1", "sequence": { "sequence": "MQASESGRTGEFCGLFVCKIRMSRTIAIVAEGILCQAAGLLDFRLSGQYILASRKRNRFHFPPLLLVFILSAPHVVLESENSTADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNRDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMVMCCSRSFVSPCPPPPQSDTNLEKDLNLCPTELEADLGKTEPLTKAPSANLSQVLPSFSPALSLIPFAFLPVPCIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKVDRKGGNAHIISSSSVHSRAGHTSSVLGPGCKHKKPLSAAKACISEILPSKFKPRLSAPSALLQDQKSILLPSEKAQSYENLCVSVSLGDSKRGLPLQVGGSVENLLMRSRRDYDGKLGSTMSLQEYSTGSRRPCPLSRRAGSQFTVLYRDMHHINRAGLSLGSVSSSSVRDLASHFERSGLALSRGELGPSQEGSENIPKHTVSSRITAFEQLIQRSRSMPSLDLSGRLSKSPTPALARGGLTSARSAESLLESTKLRPREVVEGLSPEGLYASPICSRMADPTLGFRGLMPSEPLSTCSDELDRCSNISSDSREGSSSSVHGDFPKHRLNKCKGTCPASYTRFTTIRRHEQQQTCRRPDWRPDPRGDKATLLRNIYLMSPLPFRLKKPLQHPPRQPCSGDFSGQKAEPPSQPHLDEPPSGEKPSVPKRLSSRHTMARLSRTSEAPQERPSAPEVCPRAFSNGNSMSYPDHGLDRNNNPQSELGTSLGDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1292, "header": "tr|A0A287AGR3-1|A0A287AGR3_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=3 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107000774, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042407.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042407.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043042.3", "url": "https://www.ensembl.org/id/ENSSSCP00000043042.3" } ] } }, { "isoform_ac": "A0A287B1M9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A287B1M9-1", "sequence": { "sequence": "MSRGWAVRRFLTSHWRTRPFLSRPGLAPPPTTARRPGAAGVDSSRRMLMRGRPPQPIGRSRSVGEVSLESQKNRAGPTAACSASGAGRAQPARPPGDPQGVAFVGRVCETFSARSSRTNASFHHLEPLSSAEPQFQKTCPAATMSSECDVGASKAVVNGLALGSNGRDKDTDPTKICTGKGAVTLRASSSYREIPSGSPVSPREAPQQERKAVLESENSTADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNREQQKRLSSLSDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQNSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMTNLEKDLNLCPTELEADLGKTEPLTKAPSANLSQSSAVSPTPETSSEPPGYIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKVDRKGGNAHIISSSSVHSRAGHTSSVLGPGCKHKKPLSAAKACISEILPSKFKPRLSAPSALLQDQKSILLPSEKAQSYENLCVSVSLGDSKRGLPLQVGGSVENLLMRSRRDYDGKLGSTMSLQEYSTGSRRPCPLSRRAGSQFTVLYRDMHHINRAGLSLGSVSSSSVRDLASHFERSGLALSRGELGPSQEGSENIPKHTVSSRITAFEQLIQRSRSMPSLDLSGRLSKSPTPALARGGLTSARSAESLLESTKLRPREVVEGLSPEGLYASPICSRMADPTLGFRGLMPSEPLSTCSDELDRCSNISSDSREGSSSSVHGDFPKHRLNKCKGTCPASYTRFTTIRRHEQQQTCRRPDWRPDPRGDKATLLRNIYLMSPLPFRLKKPLQHPPRQPCSGDFSGQKAEPPSQPHLDEPPSGEKPSVPKRLSSRHTMARLSRTSEAPQERPSAPEVCPRAFSNGNSMSYPDHGLDRNNNPQSELGTSLGDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1441, "header": "tr|A0A287B1M9-1|A0A287B1M9_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=2 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107137454, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057451.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057451.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049991.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049991.2" } ] } }, { "isoform_ac": "A0A287B6S0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A287B6S0-1", "sequence": { "sequence": "MSRGWAVRRFLTSHWRTRPFLSRPGLAPPPTTARRPGAAGVDSSRRMLMRGRPPQPIGRSRSVGEVSLESQKNRAGPTAACSASGAGRAQPARPPGDPQGVAFVGRVCETFSARSSRTNASFHHLEPLSSAEPQFQKTCPAATMSSECDVGASKAVVNGLALGSNGRDKGKALEGKPGISRRSRAWATLLESENSTADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNREQQKRLSSLSDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQNSEEDNPYTPTYQFPASTPSPKSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMTNLEKDLNLCPTELEADLGKTEPLTKAPSANLSQVLPSFSPALSLIPFAFLPVPCIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKVDRKGGNAHIISSSSVHSRAGHTSSVLGPGCKHKKPLSAAKACISEILPSKFKPRLSAPSALLQDQKSILLPSEKAQSYENLCVSVSLGDSKRGLPLQVGGSVENLLMRSRRDYDGKLGSTMSLQEYSTGSRRPCPLSRRAGSQFTVLYRDMHHINRAGLSLGSVSSSSVRDLASHFERSGLALSRGELGPSQEGSENIPKHTVSSRITAFEQLIQRSRSMPSLDLSGRLSKSPTPALARGGLTSARSAESLLESTKLRPREVVEGLSPEGLYASPICSRMADPTLGFRGLMPSEPLSTCSDELDRCSNISSDSREGSSSSVHGDFPKHRLNKCKGTCPASYTRFTTIRRHEQQQTCRRPDWRPDPRGDKATLLRNIYLMSPLPFRLKKPLQHPPRQPCSGDFSGQKAEPPSQPHLDEPPSGEKPSVPKRLSSRHTMARLSRTSEAPQERPSAPEVCPRAFSNGNSMSYPDHGLDRNNNPQSELGTSLGDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQFPGHSKLLVPAPTSLPHPHRALSPEMHAVTAEWISLTVGVPSRRSLALTPPLPPLPETSVYSTDPLASLARPSPSLSLSLPTSSWSDWSTPHAVGSPLALPPPHKACSLVPGAQASLHINGDSSTHMAPPGLRQDSFSQLQLGRSDKVISELSDAFSSQGKRQPWREESGARDREAGERCLGGPAISKKSCLRPSDVVRCLSSEQRFPELHAPEESWPRRPLGGPLPGREAEHPELHRGGEPAKRKAARTGASQQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1696, "header": "tr|A0A287B6S0-1|A0A287B6S0_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=3 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107137454, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046581.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046581.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052222.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052222.3" } ] } }, { "isoform_ac": "A0A287BFA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A287BFA3-1", "sequence": { "sequence": "FLSECDVGASKAVVNGLALGSNGRDKATADPFRARSISAVKIIPVKTVKNSSGLVLPPDTDPTKICTGKGAVTLRASSSYREIPSGSPVSPREAPQQERKADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDAISSPAQPEVIVVPLYLVNTDRGHEGTDRPPASRGPRGPPAPATAPAGSPLTFPTLDDFIPPHLQRRPQHSQPASAPGSFPPVSQTPPSLSPPPPLVPPVPEGLRRVSEPDRTGAVSSTDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNREQQKRLSSLSDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQNSEEDNPYTPTYQFPASTPSPKSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMSRDISPEEIDLKNEPWYKFFSELEFGKPPPKKIWDYTPGDCSILPREDRKSSAVSPTPETSSEPPGYIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQFPGHSKLLVPAPTSLPHPHRALSPEMHAVTAEWISLTVGVPSRRSLALTPPLPPLPETSVYSTDPLASLARPSPSLSLSLPTSSWSDWSTPHAVGSPLALPPPHKACSLVPGAQASLHINGDSSTHMAPPGLRQDSFSQLQLGRSDKVISELSDAFSSQGKRQPWREESGARDREAGERCLGGPAISKKSCLRPSDVVRCLSSEQRFPELHAPEESWPRRPLGGPLPGREAEHPELHRGGEPAKRKAARTGASQPSHHSLRAGPDLTESEKSYVQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1263, "header": "tr|A0A287BFA3-1|A0A287BFA3_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=2 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107014526, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065245.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065245.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055244.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055244.2" } ] } }, { "isoform_ac": "A0A287BG44-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A287BG44-1", "sequence": { "sequence": 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"length": 1716, "header": "tr|A0A287BG44-1|A0A287BG44_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=2 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107137454, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050686.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050686.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055104.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055104.2" } ] } }, { "isoform_ac": "A0A287BPJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A287BPJ8-1", "sequence": { "sequence": 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"length": 1422, "header": "tr|A0A287BPJ8-1|A0A287BPJ8_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=3 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107137454, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057776.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057776.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058030.3", "url": "https://www.ensembl.org/id/ENSSSCP00000058030.3" } ] } }, { "isoform_ac": "A0A287BPW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9/entry#A0A287BPW9-1", "sequence": { "sequence": "MSSECDVGASKAVVNGLALGSNGRDKATADPFRARSISAVKIIPVKTVKNSSGLVLPPDTDPTKICTGKGAVTLRASSSYREIPSGSPVSPREAPQQERKADEWRLPSHADANGNAQPSSLAAKGYRSVHPSFPSDKPQDAISSPAQPEVIVVPLYLVNTDRGHEGTDRPPASRGPRGPPAPATAPAGSPLTFPTLDDFIPPHLQRRPQHSQPASAPGSFPPVSQTPPSLSPPPPLVPPVPEGLRRVSEPDRTGAVSSTDTSPLLNEVSSPRVGTDPQTTAPVSKPSSAYPSTTIVNPTIVLLQHNREQQKRLSSLSDPASERRVGEQDSAPPQEKSTSPGRAAEKKAKDDSRRVAKSVQDLSDVSADEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQNSEEDNPYTPTYQFPASTPSPKSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMNYIDGEKVVKRSATLPLPTRSSSLKSSPERNDWEPPDKKVDTRKYRAEPKSIYDYQPGKSSVLTNEKMSRDISPEEIDLKNEPWYKFFSELEFGKPPPKKIWDYTPGDCSILPREDRKTNLEKDLNLCPTELEADLGKTEPLTKAPSANLSQVLPSFSPALSLIPFAFLPVPCIYSSNFHAVKRESDGAPGDFASLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKDSESPRHFIPADYLESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKRPLVKNPVDYIDLPFSSSPSRSATASPQFPGHSKLLVPAPTSLPHPHRALSPEMHAVTAEWISLTVGVPSRRSLALTPPLPPLPETSVYSTDPLASLARPSPSLSLSLPTSSWSDWSTPHAVGSPLALPPPHKACSLVPGAQASLHINGDSSTHMAPPGLRQDSFSQLQLGRSDKVISELSDAFSSQGKRQPWREESGARDREAGERCLGGPAISKKSCLRPSDVVRCLSSEQRFPELHAPEESWPRRPLGGPLPGREAEHPELHRGGEPAKRKAARTGASQPSHHSLRAGPDLTESEKSYVQPQAQQRRVTPDRSQTSQDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVRPLYL", "length": 1301, "header": "tr|A0A287BPW9-1|A0A287BPW9_PIG Computationally mapped isoform of Sorbin and SH3 domain containing 1 OS=Sus scrofa OX=9823 GN=SORBS1 PE=1 SV=2 CANONICAL=A0A286ZJC9-1" }, "locus": { "chromosome": "14", "start_pos": 107019528, "end_pos": 106899019, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059126.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059126.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058223.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058223.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 31, "start_aa": "Thr", "end_pos": 31, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr31", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 78, "start_aa": "Thr", "end_pos": 78, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr78", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 889, "start_aa": "Thr", "end_pos": 889, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr889", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJC9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-445355", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-445355", "resource": "Reactome", "description": "Smooth Muscle Contraction" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJC9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJC9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": 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"cell-substrate adhesion", "id": "GO:0031589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031589", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJC9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "signaling receptor complex adaptor activity", "id": "GO:0030159", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030159", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJC9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJC9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 193, "end_pos": 195, "annotation": "n_glycosylation_sequon" }, { "start_pos": 573, "end_pos": 575, "annotation": "n_glycosylation_sequon" }, { "start_pos": 963, "end_pos": 965, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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"PTHR22435", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22435", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22435:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22435:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15661", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15661", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZJG3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RY96", "url": "https://www.uniprot.org/uniprotkb/F1RY96", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RY96-1", "url": "https://www.uniprot.org/uniprotkb/F1RY96-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPPQGPRKPLSGRRARSLDRSQDPRRDSEPGDCQCLSMPATRSRRMLRRTASDGTRCAKSLAQSSEAQGPTATALSPEETREFLPSEPRPPQDTKKDKAQWRTQQGWLRTMMNFFFGTGHEESKEKASKRAKGKEGPPEPAETPETLGEPAPRKKAHHKKASRKKHSHKKHSAEEVKGAEGQEAKAAAASCCGEADLGPGAGEGDISDLHCFLLFEGRSAGVQGISSQATGHQREEELRKPDKDTIIQKIVELLQKVGDQWEEEQRQASQPEVAPHPPAPVAGRKSQERKSSVTRAFSHKKHSREEPKRTVAAEVSSPESRPPKRPSFLPLCVGSHRASNSSSLGMEAPEVPVAPSTADGDPSPLELSTPAGSRGPEEDLQLDRASEFKEFIQKIIALLQDAEEQVADKQVQEPEVAVENLAPVCRKKCQEKKSSFRKAFSHKKHSFKETKRTGAAGAASPESRPPKRPSFLPLCVGGHRASTCSNPDLEDLEFQEFSPAEGSPGGCSEAPFQARSHKPEVGLQPEGANESKELNIQKLVALLQEADGQLGEQIRRYPSFKRFFYRLSDSSLRKLVATLHCQEAHSAEPDRNLAEGSYPFVFDLANKPAGNNYQAVLSLVGLRYRQSSYGQFPYREAQPNITSPQSQSPD", "length": 651, "header": "tr|A0A286ZJG3-1|A0A286ZJG3_PIG Isoform 1 of BCL2 interacting protein 5 OS=Sus scrofa OX=9823 GN=BNIP5 PE=4 SV=1 CANONICAL=A0A286ZJG3-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG3/entry#A0A286ZJG3-1", "sequence": { "sequence": "MEPPQGPRKPLSGRRARSLDRSQDPRRDSEPGDCQCLSMPATRSRRMLRRTASDGTRCAKSLAQSSEAQGPTATALSPEETREFLPSEPRPPQDTKKDKAQWRTQQGWLRTMMNFFFGTGHEESKEKASKRAKGKEGPPEPAETPETLGEPAPRKKAHHKKASRKKHSHKKHSAEEVKGAEGQEAKAAAASCCGEADLGPGAGEGDISDLHCFLLFEGRSAGVQGISSQATGHQREEELRKPDKDTIIQKIVELLQKVGDQWEEEQRQASQPEVAPHPPAPVAGRKSQERKSSVTRAFSHKKHSREEPKRTVAAEVSSPESRPPKRPSFLPLCVGSHRASNSSSLGMEAPEVPVAPSTADGDPSPLELSTPAGSRGPEEDLQLDRASEFKEFIQKIIALLQDAEEQVADKQVQEPEVAVENLAPVCRKKCQEKKSSFRKAFSHKKHSFKETKRTGAAGAASPESRPPKRPSFLPLCVGGHRASTCSNPDLEDLEFQEFSPAEGSPGGCSEAPFQARSHKPEVGLQPEGANESKELNIQKLVALLQEADGQLGEQIRRYPSFKRFFYRLSDSSLRKLVATLHCQEAHSAEPDRNLAEGSYPFVFDLANKPAGNNYQAVLSLVGLRYRQSSYGQFPYREAQPNITSPQSQSPD", "length": 651, "header": "tr|A0A286ZJG3-1|A0A286ZJG3_PIG Isoform 1 of BCL2 interacting protein 5 OS=Sus scrofa OX=9823 GN=BNIP5 PE=4 SV=1 CANONICAL=A0A286ZJG3-1" }, "locus": { "chromosome": "7", "start_pos": 32048905, "end_pos": 32037367, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058810.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058810.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031698.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031698.1" } ] } }, { "isoform_ac": "F1RY96-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG3/entry#F1RY96-1", "sequence": { "sequence": "MEPPQGPRKPLSGRRARSLDRSQDPRRDSEPGDCQCLSMPATRSRRMLRRTASDGTRCAKSLAQSSEAQGPTATALSPEETREFLPSEPRPPQDTKKDKAQWRTQQGWLRTMMNFFFGTGHEESKEKASKRAKGKEGPPEPAETPETLGEPAPRKKAHHKKASRKKHSHKKHSAEEVKGAEGQEAKAAAASCCGEADLGPGAGEDTIIQKIVELLQKVGDQWEEEQRQASQPEVAPHPPAPVAGRKSQERKSSVTRAFSHKKHSREEPKRTVAAEVSSPESRPPKRPSFLPLCVGSHRASNSSSLGMEAPEVPVAPSTADGDPSPLELSTPAGSRGPEEDLQLDRASEFKEFIQKIIALLQDAEEQVADKQVQEPEVAVENLAPVCRKKCQEKKSSFRKAFSHKKHSFKETKRTGAAGAASPESRPPKRPSFLPLCVGGHRASTCSNPDLEDLEFQEFSPAEGSPGGCSEAPFQARSHKPEVGLQPEGANESKELNIQKLVALLQEADGQLGEQIRRYPSFKRFFYRLSDSSLRKLVATLHCQEAHSAEPDRNLAEGSYPFVFDLANKPAGNNYQAVLSLVGLRYRQSSYGQFPYREAQPNITSPQSQSPD", "length": 611, "header": "tr|F1RY96-1|F1RY96_PIG Computationally mapped isoform of BCL2 interacting protein 5 OS=Sus scrofa OX=9823 GN=BNIP5 PE=4 SV=2 CANONICAL=A0A286ZJG3-1" }, "locus": { "chromosome": "7", "start_pos": 32048905, "end_pos": 32037367, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001739.3", "url": "https://www.ensembl.org/id/ENSSSCT00000001739.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001695.3", "url": "https://www.ensembl.org/id/ENSSSCP00000001695.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 72, "start_aa": "Thr", "end_pos": 72, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr72", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1MZZ1-1", "protein_name": "BCL2 interacting protein 5", "gene_name": "BNIP5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MILSLDDWSSSAMEPPWSPRKPLSWRRAKSLDRLQNAKKDSESWDCQGPSLPTGPFRGGLCRTASDGARCLKSPVQSVEAQDTTAAAPSPEETKDLLSEQRPLQDAKKDKAQWQAPQGWLRFVVNLFFRTGPEEPKEKTNKKAKGKEGPSEPTETPESLGEPAPRKKAHSKKASRKKHSQRKRCAEEARGARDQEAEGQEAKAAEASLSEGADLGPAAREDIIIQKIVELLQKVGDQWEDEQHQALQSVVTPRNPAPVVKKKSQEKMSSLKRAFSFKKYVSEEPKRAGAAHVSSAESRQPKRPNFLPLCVGGHRPSSSSLPGVEEPEVQEAVTTDGGDPSPFELCTPAESGGPDKDLQQDRATEFKEFIQKIIALLQDAEEQCRDKQLQVQEPEVAVENLAPAYRKKCQERKSNFRKAFYKKHSSKDPKRAGAAGAASPDSRPPKKPSFLPLCVGGHWPSVSSDSDPEDLEFQGSPPTEGEPVGAPEALSQARSHKPEAGRQPDGANESKELIIQELVALLQEVDGQLGKQIKRHPSFKKFLYEPSVSSLRKLVATLRSRGAHTTEPKRTYPFVFGLGNQGAGNNYHPVLSLTGLHYRRPSYGQFPYEEAQQNITSSQIQSPD", "length": 623 }, "evidence": [ { "id": "A0A286ZJG3", "url": "https://omabrowser.org/oma/group/A0A286ZJG3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C671-1", "protein_name": "Protein BNIP5", "gene_name": "BNIP5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MENPRCPRRPLAEKKARSLDRPQAPGKGSESWDCHWLSLPTAPSRKALHWTTSDWARHSDSPAPSAEAHCTTAAAPTPEETGDFLPSEQRPSQDTKKGWLKTMLNFFVRTGPEEPREKASRRPRGKEGISQHPEPLEAAGEPALRKKAHHDKKPSRKKQGHKKHAAEVTKAAQDQEARGREEGLSKAAAALRSGEADLGPARRGGEDSDHQSFLIKVDGTGALDVSPHATGHQQEEELKKPDQDAIIQMIVELLKRVGDQWEEEQSLASQLGVALPNPAPAVRKKSQEKKTSLKRTSKTNPKKHGSEEAKRGAADVSSPEAWPPKKSSFLPLCVSGHRPSISSSYGLEEPKVQEAPSTEAGAPGPSVLPTPSESQEPGEELPLDRASEYKEFIQKIISMLQDAEEQQGEEQPQVQQEEVGVENPAPHCRRKSQEKRSSFRRAFYHKKHTSKEPRRAGAAGAASPEARRPKRPSFLPLCVGGHRPSTSSSLDPEDLECREPLPAEGEPVVISEAPSQARGHTPEGAPQLSGACESKEIIIQKLVALLQEVDGQLGQQIRRHPSFKRFFYEFSDSSLSKLVATLRSQVAHSSKLDRNRARRLYQFDVSLANKFAGSNSHAMCILMGLRDHYNCTQFPYREDQPNITSPKVESPD", "length": 652 }, "evidence": [ { "id": "A0A286ZJG3", "url": "https://omabrowser.org/oma/group/A0A286ZJG3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CC96-1", "protein_name": "Protein BNIP5", "gene_name": "Bnip5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRSRNPSQGMPRDSSDSCGLSPVETPKGKKRARSLDRQVPRKKDPESSNTRCPSSATCRRTASDGARSSESPSHFAEAQGATAAALPPGEGRGFLPSEQGPPEDTKKERLPREAQQSWLRLVLNILLMRIEEPREKASRASKGKGDLPEAAEEPALRKKSHEKRTSRKKHSHRKPIAEEPPGPQTAEAQGREDVPPSLAASSAPHEIALGLICRGGPDSDLPQALPTEGDHAETPDSFGQASGPPLEEDPRKPDQDDVIWQIVELLKKAGDQLEEEQVQIPQPEAVPPRKPTPLPRKKSQEKKSSLKRVLSLKKPASEEPKRVGTATTLGPETRPKRPSFLPLCVSSQRASTSSSLDLEAPEFQEVPSVDGGGSHPSELHTPAAIFQGPEEKPLLDRASESREFRRKILVLLQSAEDERGEQEAQAQEAEKAGENPTPAGKVKSQVKKSNLRRAFSLRKHSSKDSKKTEASGTPGSGSLEARPPKKHGFLPMCVSGHRASISSSPESLEFQKTEAAGGAPAGSPGAPFQARSHTPDEGPSPERAWESKEFMIQKLVASLQEVDRDLGRQIRKYPSFKRFFNEFSDASLRKLVATLERQKASLSEEGRSLANRPPPCAFGTLNKFAATRSCTICTLMQSRGEYKGHSYAHFLSRKAEQDITNLDSQSPD", "length": 669 }, "evidence": [ { "id": "A0A286ZJG3", "url": "https://omabrowser.org/oma/group/A0A286ZJG3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 341, "end_pos": 343, "annotation": "n_glycosylation_sequon" }, { "start_pos": 530, "end_pos": 532, "annotation": "n_glycosylation_sequon" }, { "start_pos": 641, "end_pos": 643, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZJG3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 651, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZJG3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZJG3" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 72 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 341, "end_pos": 343 }, { "start_pos": 530, "end_pos": 532 }, { "start_pos": 641, "end_pos": 643 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZJG8-1", "uniprot_ac": "A0A286ZJG8", "uniprot_id": "A0A286ZJG8_PIG", "mass": { "chemical_mass": 52292.0, "monoisotopic_mass": 52292.0 }, "refseq": { "ac": "XP_020939221", "name": "tRNA modification GTPase GTPBP3, mitochondrial isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939221" }, "gene_names": [ { "name": "GTPBP3", "type": "recommended", "evidence": [ { "id": "A0A286ZJG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ] }, { "name": "GTPBP3", "type": "synonym", "evidence": [ { "id": "XP_020939221", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939221" } ] } ], "protein_names": [ { "name": "5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial", "type": "recommended", "evidence": [ { "id": "A0A286ZJG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8/entry#names_and_taxonomy" } ] }, { "name": "GTP-binding protein 3", "type": "synonym", "evidence": [ { "id": "A0A286ZJG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8/entry#names_and_taxonomy" } ] }, { "name": "tRNA modification GTPase GTPBP3, mitochondrial isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020939221", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939221" } ] }, { "name": "tRNA modification GTPase GTPBP3, mitochondrial", "type": "synonym", "evidence": [ { "id": "A0A286ZJG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "GTPase component of the GTPBP3-MTO1 complex that catalyzes the 5-taurinomethyluridine (taum(5)U) modification at the 34th wobble position (U34) of mitochondrial tRNAs (mt-tRNAs), which plays a role in mt-tRNA decoding and mitochondrial translation. Taum(5)U formation on mammalian mt-tRNA requires the presence of both GTPBP3-mediated GTPase activity and MTO1 catalytic activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A8J8", "url": "https://www.uniprot.org/uniprotkb/A0A287A8J8#function" }, { "database": "UniProtKB", "id": "ARBA00059757", "url": "https://www.uniprot.org/uniprotkb/ARBA00059757#function" }, { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GTPBP3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8", "locus": { "chromosome": "2", "start_pos": 60352026, "end_pos": 60357176, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038440", "url": "https://www.ensembl.org/id/ENSSSCG00000038440" } ] } } ], "crossref": [ { "id": "ENSSSCG00000038440", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038440", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04164", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04164", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14858", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14858", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "110259323", "url": "https://www.ncbi.nlm.nih.gov/gene/110259323", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004520", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004520", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006073", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018948", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018948", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025867", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025867", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027266", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027266", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027368", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027368", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031168", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031168", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EFHCHGG", "url": "https://omabrowser.org/oma/group/EFHCHGG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR42714", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42714", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR42714:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42714:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10396", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10396", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12631", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12631", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939221", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939221", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "19669", "url": "https://www.rhea-db.org/rhea/19669", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJG8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A8J8", "url": "https://www.uniprot.org/uniprotkb/A0A287A8J8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A8J8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A8J8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWRVLWTLVARAARGPLSSRPCPRQSSGAPALGPGSTIFALSSGQGRCGIAVIRTSGPASGHALRSLTAPRDLPPARKACLRLLSDPCSGEPLDRALVLWFPGPQSFTGEDCAEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELGHLCQGWAETLTRALAHVEAYIDFGEDDNLEEGVLDQADSEVRELEVALGTHLRDARRGQRLRSGAHVVVAGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLREGVGPVEKEGVRRAQKRLEQADLILAVLDASDLTSSSSCNFLDTVVIPTVAGSPHGSSQRLLLVLNKSDLLPSGGPDLHPDLPPYLLLSCLTGEGLDGLLEALRKELATLCGDPSTGPPLLTRARHQHHLQGCLDALGHYKQAKDLALAAEALRVARGHLARLTGRGGTEEILDIIFRDFCVGK", "length": 494, "header": "tr|A0A286ZJG8-1|A0A286ZJG8_PIG Isoform 1 of 5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial OS=Sus scrofa OX=9823 GN=GTPBP3 PE=3 SV=2 CANONICAL=A0A286ZJG8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJG8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8/entry#A0A286ZJG8-1", "sequence": { "sequence": "MWRVLWTLVARAARGPLSSRPCPRQSSGAPALGPGSTIFALSSGQGRCGIAVIRTSGPASGHALRSLTAPRDLPPARKACLRLLSDPCSGEPLDRALVLWFPGPQSFTGEDCAEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELGHLCQGWAETLTRALAHVEAYIDFGEDDNLEEGVLDQADSEVRELEVALGTHLRDARRGQRLRSGAHVVVAGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLREGVGPVEKEGVRRAQKRLEQADLILAVLDASDLTSSSSCNFLDTVVIPTVAGSPHGSSQRLLLVLNKSDLLPSGGPDLHPDLPPYLLLSCLTGEGLDGLLEALRKELATLCGDPSTGPPLLTRARHQHHLQGCLDALGHYKQAKDLALAAEALRVARGHLARLTGRGGTEEILDIIFRDFCVGK", "length": 494, "header": "tr|A0A286ZJG8-1|A0A286ZJG8_PIG Isoform 1 of 5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial OS=Sus scrofa OX=9823 GN=GTPBP3 PE=3 SV=2 CANONICAL=A0A286ZJG8-1" }, "locus": { "chromosome": "2", "start_pos": 60355304, "end_pos": 60352487, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039959.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039959.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031675.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031675.2" } ] } }, { "isoform_ac": "A0A287A8J8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8/entry#A0A287A8J8-1", "sequence": { "sequence": "NANSPPGPRPHGILGLVPAPWTWILRLLALVSTSVWNPRWTPCPRQSSGAPALGPGSTIFALSSGQGRCGIAVIRTSGPASGHALRSLTAPRDLPPARKACLRLLSDPCSGEPLDRALVLWFPGPQSFTGEDCAEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELGHLCQGWAETLTRALAHVEAYIDFGEDDNLEEGVLDQADSEVRELEVALGTHLRDARRGQRLRSGAHVVVAGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLREGVGPVEKEGVRRAQKRLEQADLILAVLDASDLTSSSSCNFLDTVVIPTVAGSPHGSSQRLLLVLNKSDLLPSGGPDLHPDLPPYLLLSCLTGEGLDGLLEALRKELATLCGDPSTGPPLLTRARHQHHLQGCLDALGHYKQAKDLALAAEALRVARGHLARLTGRGGTEEILDIIFRDFCVGK", "length": 515, "header": "tr|A0A287A8J8-1|A0A287A8J8_PIG Computationally mapped isoform of 5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial OS=Sus scrofa OX=9823 GN=GTPBP3 PE=3 SV=2 CANONICAL=A0A286ZJG8-1" }, "locus": { "chromosome": "2", "start_pos": 60357176, "end_pos": 60352487, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045317.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045317.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040261.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040261.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E1BH64-1", "protein_name": "5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial", "gene_name": "GTPBP3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLLEEHHFTAPQRASPRLLSLSLASRSEDLQWMGGTFSTGPNDNRELLSTLPVTPRSGRNLLRGLADPRGRVGRRGADCESMWRGLWTLVSRAARGPHSPRLCTRQGSGYRAPGSGATIFALSSGQGRCGIAVIRTSGPASGHALQSLTAPRDLPLARKACLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCAEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELGDLCRGWAETLTKALAHVEAYIDFSEDDNLEEGVLDQADSEVRKLEVALGVHLRDARRGQRLRSGAHVVVAGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLREGVGPVEQEGVRRAQKRLEQADLILAVLDASDLASPASCNFLDTVVIPAGARNPNGSRQRLLLVLNKSDLLPAGRSDLHPDLPSHLLLSCLTGEGLDGLLEALKKELAALCGDPSTGPLLTRSRHQHHLRGCLDALGQYKQAKDLALAAEALRVARGHLSHLTGGGGTEEILDIIFRDFCVGK", "length": 574 }, "evidence": [ { "id": "A0A286ZJG8", "url": "https://omabrowser.org/oma/group/A0A286ZJG8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P32559-1", "protein_name": "tRNA modification GTPase MSS1, mitochondrial", "gene_name": "MSS1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MNSASFLQSRLISRSFLVRRSLKRYSGLAKPYTFQQPTIYALSTPANQTSAIAIIRISGTHAKYIYNRLVDSSTVPPIRKAILRNIYSPSSCSVKPHDQKESKILLDTSLLLYFQAPYSFTGEDVLELHVHGGKAVVNSILKAIGSLHDRSSGKDIRFALPGDFSRRAFQNGKFDLTQLEGIKDLIDSETESQRRSALSSFNGDNKILFENWRETIIENMAQLTAIIDFADDNSQEIQNTDEIFHNVEKNIICLRDQIVTFMQKVEKSTILQNGIKLVLLGAPNVGKSSLVNSLTNDDISIVSDIPGTTRDSIDAMINVNGYKVIICDTAGIREKSSDKIEMLGIDRAKKKSVQSDLCLFIVDPTDLSKLLPEDILAHLSSKTFGNKRIIIVVNKSDLVSDDEMTKVLNKLQTRLGSKYPILSVSCKTKEGIESLISTLTSNFESLSQSSADASPVIVSKRVSEILKNDVLYGLEEFFKSKDFHNDIVLATENLRYASDGIAKITGQAIGIEEILDSVFSKFCIGK", "length": 526 }, "evidence": [ { "id": "A0A286ZJG8", "url": "https://omabrowser.org/oma/group/A0A286ZJG8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q55C52-1", "protein_name": "tRNA modification GTPase gtpbp3, mitochondrial", "gene_name": "gtpbp3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKRLFCSINKNKIINEPPKLSIIKDTIYNLSSGVGKSGVAIIRVSGPQAETVIRKLIKKSDVDKNEEIKSRYATLSTFYNPKTNEQLDKGMFIWFPSPNSFTGEDVVEFHIHGGRAVIYETMEAIGLIEGTRPSEQGEFTKRAFENGKMDLTQVEGLSDLLDASTSFQKKIALKQMQGSISEFYLSLRKDLIRASAYMEAFIDFGDDAELDPEIVDQSRNRIISIRDKIQQHLNDGKRGERLRDGANIAIVGPPNAGKSSLINLLTNRKASIVSPIAGTTRDIVEVILDIDGYPVIIGDTAGLRNSTNDQIEIEGIEMAKDRFNNSDIKLFLFDSFNLFSQLNQNQNLNSSFNFNEEIKNLFNFIDNETIIIFNKSDLLKQFDNLKEWENLKLNLLDNIKKSNNLNSIQSIEISCNNNENIKDLLNLLKLNLKNLFEIQDKESPLLTRLRYKQHLSDCVESLDRYLYYCEHDVVLASEELRSAILSISEITHSVNIDDLLDIIFKDFCIGK", "length": 512 }, "evidence": [ { "id": "A0A286ZJG8", "url": "https://omabrowser.org/oma/group/A0A286ZJG8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5PQQ1-1", "protein_name": "5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial", "gene_name": "Gtpbp3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWRGLSALVTRPASAPLRLCARCSTGAESLVPGSTIFALSSGQGRCAIAVIRTSGPASGLALRSLTALREPPPARSACLRLLRHPCSGEPLDRSLVLWFPGPQSFTGEDCMELHVHGGPAVVSGVLQALGSVPGLRPAKAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELSQLCQGWAKTLTKALAHVEAYIDFGEDDNLEEGVLEQVDRDVRALEVALSSHLRDARRGQRLRSGANVVVAGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDILETPVDLAGFPVLLSDTAGLREGAGAVEQEGVRRARQRLEQADIILGMLDASDLASSSSCSFLDTVVAPLVAQSHDSGRQRLLLLLNKSDLLSANAPASSTALPPHLLLSCHTGAGMDALLQALKTELAAVCGDPSTGPPLLTRARHQYHLQGCLDALGRFQLTTDLALAAEALRQARRQLSHLTGGGGTEEILDLIFQDFCVGK", "length": 492 }, "evidence": [ { "id": "A0A286ZJG8", "url": "https://omabrowser.org/oma/group/A0A286ZJG8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q923K4-1", "protein_name": "5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial", "gene_name": "Gtpbp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRGLSALVTQAAWAPLRLCARCSTSAESLVPSSTIFALSSGQGRCAIAVIRTSGPASGLALRSLTALQEPPPARRACLRLLRHPCSGEPLDRSLVLWFPGPQSFTGEDCVEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIRAETEAQRRQALRQLDGELSQLCQGWAKTLTKALAYVEAYIDFGEDDNLEEGVLEQADREVRALEVALGSHLRDARRGQRLLSGANVVVTGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGAVEQEGVRRARHRLEQADIILGVLDASDLASSSSCSFLDTVVTPLLAQSQDSGGQRLLLLLNKSDLLSANAPACDIALPPHLLLSCHTGAGMDSLLQALKTELAAVCGDPSTGPPLLTRVRHQYHLQGCLDALGHYQLATDLALAAEALRQARRQLNHLTGGGGTEEILDLIFQDFCVGK", "length": 492 }, "evidence": [ { "id": "A0A286ZJG8", "url": "https://omabrowser.org/oma/group/A0A286ZJG8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q969Y2-1", "protein_name": "5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial", "gene_name": "GTPBP3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGHALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPAVVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQLDGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK", "length": 492 }, "evidence": [ { "id": "A0A286ZJG8", "url": "https://omabrowser.org/oma/group/A0A286ZJG8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VC87-1", "protein_name": "tRNA modification GTPase GTPBP3, mitochondrial", "gene_name": "Dmel\\CG18528", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MALLRNASQSFLGSFRRFASSGCTIYSLSSGHVKCGVSVIRVSGPQTKKALRAIVANKEYEPKARQAYLKSFYHPASKEMIDRGLLLWFPGPASFTGEDSCEFQVHGSLAVIAAMLDALGKVDGLRPAEPGEFTKRAFFGGKLDLTEVEGLADLIHAETEAQRKQALLQSTGALARLYDNWRRRLIRCAAHLEAYIDFAEEEQIEGGIILQLGKELKAVKREIREHLSDQRQGELLRDGVRTVIIGAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDIIETMHNFGGYPVVFSDTAGLRRYTTDSIEQEGMQRAKNCLVQSDLILLLAEAKNIAQLTHDDAVAPFVDSYLGELDIPLDMCSGKRLQLVANKTDTLTDEEHQQLDKLSNVLAISCHKPDKMPVFLGSLEKQLQELCGEPRAENPRITNTRYRQQLERCIENIDIFLRDYRPDVYPDMAIAASKLRNSVRCIERITGHISCEDILDVVFKDFCIGK", "length": 493 }, "evidence": [ { "id": "A0A286ZJG8", "url": "https://omabrowser.org/oma/group/A0A286ZJG8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" }, { "name": "tRNA 5-taurinomethyluridine synthase activity", "id": "GO:0160236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160236", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" }, { "name": "GTPBP3-MTO1 complex", "id": "GO:7770010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:7770010", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "tRNA wobble uridine modification", "id": "GO:0002098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002098", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" }, { "name": "tRNA methylation", "id": "GO:0030488", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030488", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" }, { "name": "mitochondrial tRNA modification", "id": "GO:0070900", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070900", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" }, { "name": "mitochondrial tRNA wobble uridine modification", "id": "GO:0070899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070899", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJG8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJG8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 376, "end_pos": 378, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19669", "name": "", "equation": "GTP + H2O = GDP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19669", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19669" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], 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"uniprot_ac": "A0A286ZJH4", "uniprot_id": "A0A286ZJH4_PIG", "mass": { "chemical_mass": 156624.0, "monoisotopic_mass": 156624.0 }, "refseq": { "ac": "XP_005664215", "name": "protein SCAF11 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005664215" }, "gene_names": [ { "name": "SCAF11", "type": "recommended", "evidence": [ { "id": "A0A286ZJH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH4" } ] }, { "name": "SCAF11", "type": "synonym", "evidence": [ { "id": "XP_005664215", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005664215" } ] } ], "protein_names": [ { "name": "SR-related CTD associated factor 11", "type": "synonym", "evidence": [ { "id": "A0A286ZJH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH4/entry#names_and_taxonomy" } ] }, { "name": "protein SCAF11 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_005664215", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005664215" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJH4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SCAF11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH4", "locus": { "chromosome": "5", "start_pos": 76809514, "end_pos": 76848660, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000806", "url": "https://www.ensembl.org/id/ENSSSCG00000000806" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000806", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000806", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525109", "url": "https://www.ncbi.nlm.nih.gov/gene/100525109", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR057031", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057031", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525109", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525109", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZJH4", "url": "https://www.orthodb.org/?gene=A0A286ZJH4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47048", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47048", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47048:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47048:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23030", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23030", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005664215", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005664215", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZJH4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJH4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGX9", "url": "https://www.uniprot.org/uniprotkb/F1SGX9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGX9-1", "url": "https://www.uniprot.org/uniprotkb/F1SGX9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWVCQSWEFTTLQNTRTLASCPIDRKPFQAVFKFSALEGCVKVQVKRQLRETKDKKNESSFKKQLSYQENSKSCVRKNVIREDLLSTKLYDLKMIYRNSKYSEMGGKKNAIIKTNKPRRSNQCTNHCFRNFFSNIFSSSSHTGESSFTCTAYCAEFIEGSEISALIRQKRQELELSWFPDTLPGAGRIGFIPWNIETEVLPLISSVLPRTIFPSSTISLENFGTSCKGYALAHTQEGEEKKQTSGTSNTRGSRRKPAATTPTRRSTRNTRAEPVSQSQRSPISNNSGCDAPDNNNPSVSVSSSAESEKQTRQAPKRKSLRRGRKPPLLKKKLRSSVPPHEKSSSSDSVDEEMAESDIPPVLEKENQSEVESSDTVQVNRENEPANGLRSCSGLIEENEERTETSDTEERVESSYSGSGAQDPPVLVGEEEEIKKVKNTGIEANVLCLESEISENISEKGGDPLENQDQIAGPTDSEVRADTFTDHPPDGFLPCSGSEIEVHQSVSSLGDLPVNAESVANEEKVMESPVVEMIDHKDSTIKTEQFGDSPKLESSEGGITQTLDRKSIKSSEVGHVENENVEIIATCNTSGNENFNSIQDSENNSLKNNLNTQLDKSLEEKTESLVEHSKTTELPKTHIEQIEKHFSEDNNEMIPMECESFCSDQNESEIEPSVNADAKQLNENSVEHSFQKNMSSSDPVKEKVESVSQPSESPIDTIEKAKKPRTRRSRFHSPSTTWSPNKDTAREKKRSQSPSPRRETGKESRKSQSPSPKKESARGRKSSRSQSPKKDSGRERRPSQSRSPKRDGAKEGKRSESLSPKRDTSRENRRSQPRVKGSSPREKSRSQSGERESDRDGPRRDRDRERRTRRWSRSRSRSRSPSRSRTKSKSSSFGRNDRDSYSPRWKERWANDGWRCPRGNERYRKNDPEKQSENTRKEKNDICPDASDSNSADKHRNDCPNWVTEKINSGPDPRTRNPEKLKDSHWEEKRNENSGNSWNKNFGSGWRSNRGRGNRGRGTYRGGFAYTDQNENRWQNRKPLSGNSNSSGNETLKFVEQQPYKRKSEQEFSFDTPADRSGWTSASSWAVRKTLPADVQNYYSRRGRNSSGPQSGWTRQEEETTEQDSNLKDQTNQQGDGSQLPINMMQPQMNVMPQQMNAQHQPMNIFPYPVGVHAPLMNIQRNPFNIHPQLPLHLHTGVPLMQVAAPTSVTQGLPPPPPPPPPSQQVGYIASQPDGKQLQGIPSASHVSNNMSTPVLPALTAAPGNTGTVQGPSSGNTSSSSHSKASNAAVKLAESKVSVTVEASADSSKTDKKLQIQERAAQEVKLAIKPFYQNKDITKEEYKEIVRKAVDKVCHSKSGEVNSTKVANLVKAYVDKYKYSRKGSQKKTLEETVSTDKNIG", 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"length": 1398, "header": "tr|A0A286ZJH4-1|A0A286ZJH4_PIG Isoform 1 of SR-related CTD associated factor 11 OS=Sus scrofa OX=9823 GN=SCAF11 PE=1 SV=2 CANONICAL=A0A286ZJH4-1" }, "locus": { "chromosome": "5", "start_pos": 76848540, "end_pos": 76811582, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045668.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045668.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031726.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031726.2" } ] } }, { "isoform_ac": "F1SGX9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJH4/entry#F1SGX9-1", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/F1S4P4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S4P4-1", "url": "https://www.uniprot.org/uniprotkb/F1S4P4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAEATDPQLMLGVGLIEKDTNGEVLWVWCYPSTTATLRNLLLRKCCLTDENRLLHPFVYGQYRRTWFYITTVEVPDASVLKKVTHFSIVLTAKDFNPEKYAAFTRILCRMYLKHGSPVKMMESYIAVLTKGICQSEENGSFLSKDFDARKAYLAGSIKDIVSQFGMETVILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDWTILHSYVHLDADELEALQMCPGYVAGFVDLEVSNRSDLYDVFVNLADSEITIAPLAKEAMTMGKLHKEIGQLIVQSAEDPEKSDSQVIQDISLKTKEIFTNLAPFSEVSDDGEKRVLNYEALKQRRFPPATENFLYHLAAAEQMLKI", "length": 357, "header": "tr|A0A286ZJN7-1|A0A286ZJN7_PIG Isoform 1 of DENN domain containing 10 OS=Sus scrofa OX=9823 GN=DENND10 PE=3 SV=1 CANONICAL=A0A286ZJN7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJN7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7/entry#A0A286ZJN7-1", "sequence": { "sequence": "MAAAEATDPQLMLGVGLIEKDTNGEVLWVWCYPSTTATLRNLLLRKCCLTDENRLLHPFVYGQYRRTWFYITTVEVPDASVLKKVTHFSIVLTAKDFNPEKYAAFTRILCRMYLKHGSPVKMMESYIAVLTKGICQSEENGSFLSKDFDARKAYLAGSIKDIVSQFGMETVILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDWTILHSYVHLDADELEALQMCPGYVAGFVDLEVSNRSDLYDVFVNLADSEITIAPLAKEAMTMGKLHKEIGQLIVQSAEDPEKSDSQVIQDISLKTKEIFTNLAPFSEVSDDGEKRVLNYEALKQRRFPPATENFLYHLAAAEQMLKI", "length": 357, "header": "tr|A0A286ZJN7-1|A0A286ZJN7_PIG Isoform 1 of DENN domain containing 10 OS=Sus scrofa OX=9823 GN=DENND10 PE=3 SV=1 CANONICAL=A0A286ZJN7-1" }, "locus": { "chromosome": "14", "start_pos": 129046507, "end_pos": 129023418, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060975.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060975.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031742.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031742.1" } ] } }, { "isoform_ac": "F1S4P4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7/entry#F1S4P4-1", "sequence": { "sequence": "MAGVLEFRRLFGTPLGNVREPVVRPFAPGAKIGVGKGWNPCHSSNLSNGSDHTGSLTHCATGELLIHNFLSDHLSTVEKDTNGEVLWVWCYPSTTATLRNLLLRKCCLTDENRLLHPFVYGQYRRTWFYITTVEVPDASVLKKVTHFSIVLTAKDFNPEKYAAFTRILCRMYLKHGSPVKMMESYIAVLTKGICQSEENGSFLSKDFDARKAYLAGSIKDIVSQFGMETVILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDWTILHSYVHLDADELEALQMCPGYVAGFVDLEVSNRSDLYDVFVNLADSEITIAPLAKEAMTMGKLHKEIGQLIVQSAEDPEKSDSQVIQDISLKTKEIFTNLAPFSEVSDDGEKRVLNYEALKQRRFPPATENFLYHLAAAEQMLKI", "length": 416, "header": "tr|F1S4P4-1|F1S4P4_PIG Computationally mapped isoform of DENN domain containing 10 OS=Sus scrofa OX=9823 GN=DENND10 PE=3 SV=3 CANONICAL=A0A286ZJN7-1" }, "locus": { "chromosome": "14", "start_pos": 129046507, "end_pos": 129007248, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011681.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011681.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011379.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011379.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155371", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155371", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0X4Q7-1", "protein_name": "Family with sequence similarity 45 member A", "gene_name": "FAM45A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAEPETQLLLGVGLIEKDTNGDALWVWCYPSVTAELRTLLLRKCCLTDESKLLHTFVFGQYKRTWFYITTVEVQDSPALKKVTHFSIVLTAKDFNPEKYGAFTRILCRIYLKYGSPVKMMESYIAVLTKGICQSEENGSFLSKDFDARKAYLAGSIKDIVSQFGMETVILYTALMLKKRIVVYHPRIEAIQEFTRTLPALVWHRQDWSILHSYVHLNEEEVEALKACAGYVAGFTDSEVNSRPDLYDVYVNLADSEITISPVVKEAMTMGKLHKEIGQLIVQSAEDPDKSDSQVIKDISLKTKEILSTLASLTEVSDGNEKPTLNSEALKQKQFPPATENFLFHLAAAEQMLKI", "length": 354 }, "evidence": [ { "id": "A0A286ZJN7", "url": "https://omabrowser.org/oma/group/A0A286ZJN7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABI0NIS7-1", "protein_name": "DENN domain containing 10", "gene_name": "DENND10", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPTSRSRWRPRVSFVQEGTLEKDTNGEVLWVWCYPSTTATLRNLLLRKCCLTDENKLLHPFVFGQYRRTWFYITTVEVPDSSILKKVTHFSIVLTAKDFNPEKYAAFTRILCRMYLKHGSPVKMMESYIAVLTKGICQSEENGSFLSKDFDARKAYLAGSIKDIVSQFGMETVILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDWTILHSYVHLDADELEALQMCPGYIAGFVDLDVSNRSDLYDVFVNLADSEITIAPLAKEAMTMGKLHKEIGQLIVQSAEDPEKSDSQVIQDISLKTKEIFTNLAPFSEVSDDGEKRVLNYEALKQRRFPPATENFLYHLAAAEQMLKI", "length": 359 }, "evidence": [ { "id": "A0A286ZJN7", "url": "https://omabrowser.org/oma/group/A0A286ZJN7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0LUV8-1", "protein_name": "DENN domain containing 10", "gene_name": "Dennd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGVAKSWGGTCSAEPGKRRKMAAVVAMDTQLMLGVGLIEKDTNGEVLWVWCYPSTTASLRNLLLRKCCLTDENKLLHPFVFGQYRRTWFYVTTVEVPDSSVLKKVTHFSIVLTAKDFNPEKYAAFTRILCRIYLKYGSPVKMMESYIAVLTKGICQSEENGSFLSRDFDGRKAYLAGSIKDIVSQFGMETIILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDWSILHSYMHLHAEELEGLQMCTGYIAGFVDLEVSNRPDLYDVFVNLADSEIIIAPLAKEAMTMGKLHKEIGQLIVQSAEDPEKSDSQVIQDIALKTKEIFTHLAPFSEASDAGKVFLNVEALKQKRFPPATENFLYHLAAAEQMLKADSYFIHGSLSSPLGAALLSVRLRAPGTVGTEASLLHKCCWEP", "length": 418 }, "evidence": [ { "id": "A0A286ZJN7", "url": "https://omabrowser.org/oma/group/A0A286ZJN7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A8E7G4-1", "protein_name": "DENN domain-containing protein 10", "gene_name": "dennd10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MATPELMLSLGLIEKDVNADTLWVWCYPSIDADLREVMLRKCCLTLDNQVLHTFVFGQFCRTWYYITTVEVQEPTVLKKVTHFSIVVTAKDFNPEKYAAFSRVLCRTYMKHGSPVKMMEGYIAVLTKGICQSDENGSFLIKDYDVRKALLAGSLKDVVSQFGMETIILYTALMLKKRVVVYHPRIEALLEFTRALPCLVWHRKDWSILHPFVHLENDELENLKVCTGYVAGFVDPEVKDRSDLFDVFVNLPDSEITVSQNAKEAMSMGKLHKEIGNFIVQAAEDADRSDAQVIKDISVKTKEILSNLMSLADHADNSKLTLECLKQGHYPPATENFLFHLAAAEQLLKI", "length": 349 }, "evidence": [ { "id": "A0A286ZJN7", "url": "https://omabrowser.org/oma/group/A0A286ZJN7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q55FE3-1", "protein_name": "DENN domain-containing protein 10", "gene_name": "dennd10", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATSISLEDSITIFEKDQNSDVLMSWCFPTITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFNPEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIVVYSEKLSSLLKVIRALPLFVFHRQNWNILRPFVTISDLELKDLVSTGVYCAGFTDSSIKSREDLYDILVDLSSKEVSVSSQSKDQFILGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETRKLPNGMSTFLFNIANAEGLNG", "length": 366 }, "evidence": [ { "id": "A0A286ZJN7", "url": "https://omabrowser.org/oma/group/A0A286ZJN7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8TCE6-1", "protein_name": "DENN domain-containing protein 10", "gene_name": "DENND10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAEVADTQLMLGVGLIEKDTNGEVLWVWCYPSTTATLRNLLLRKCCLTDENKLLHPFVFGQYRRTWFYITTIEVPDSSILKKVTHFSIVLTAKDFNPEKYAAFTRILCRMYLKHGSPVKMMESYIAVLTKGICQSEENGSFLSKDFDARKAYLAGSIKDIVSQFGMETVILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDWTILHSYVHLNADELEALQMCTGYVAGFVDLEVSNRPDLYDVFVNLAESEITIAPLAKEAMAMGKLHKEMGQLIVQSAEDPEKSESHVIQDIALKTREIFTNLAPFSEVSADGEKRVLNLEALKQKRFPPATENFLYHLAAAEQMLKI", "length": 357 }, "evidence": [ { "id": "A0A286ZJN7", "url": "https://omabrowser.org/oma/group/A0A286ZJN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D8N2-1", "protein_name": "DENN domain-containing protein 10", "gene_name": "Dennd10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAVVAMDTQLMLGVGLIEKDSNGEALWVWCYPSTTASLRNLLLRKCCLTDENKLLHPFVFGQYRRTWFYVTTVEVPDSSVLKKVTHFSIVLTAKDFNPEKYAAFTRILCRIYLKYGSPVKMMESYIAVLTKGICQSEENGSFLSRDFDGRKAYLAGSIKDIVSQFGMETVILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDWTILHSYMHLHAEELEGLQMCTGYIAGFVELEVSNRPDLYDVFVNLADSEITIAPLAKEAMTMGKLHKEIGQLIVQSAEDPEKSDSQVIQDIALKTKEIFTHLAPFSEVSDDGGKVILNVEALKQQRFPPATENFLYHLAAAEQMLKV", "length": 357 }, "evidence": [ { "id": "A0A286ZJN7", "url": "https://omabrowser.org/oma/group/A0A286ZJN7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of early endosome to late endosome transport", "id": "GO:2000641", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000641", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" } ], "pmid": "" }, { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" } ], "pmid": "" }, { "name": "endosome transport via multivesicular body sorting pathway", "id": "GO:0032509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032509", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 244, "end_pos": 246, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZJN7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJN7" }, { "id": "PS50211", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50211" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UDENN", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 357, "start_aa": "Met", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 140, "end_pos": 142 }, { "start_pos": 244, "end_pos": 246 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZK18-1", "uniprot_ac": "A0A286ZK18", "uniprot_id": "A0A286ZK18_PIG", "mass": { "chemical_mass": 88965.0, "monoisotopic_mass": 88965.0 }, "refseq": { "ac": "XP_020926224", "name": "adhesion G-protein coupled receptor G7 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926224" }, "gene_names": [ { "name": "ADGRG7", "type": "recommended", "evidence": [ { "id": "A0A286ZK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18" } ] }, { "name": "ADGRG7", "type": "synonym", "evidence": [ { "id": "XP_020926224", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926224" } ] } ], "protein_names": [ { "name": "Adhesion G-protein coupled receptor G7", "type": "recommended", "evidence": [ { "id": "A0A286ZK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18/entry#names_and_taxonomy" } ] }, { "name": "G-protein coupled receptor 128", "type": "synonym", "evidence": [ { "id": "A0A286ZK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18/entry#names_and_taxonomy" } ] }, { "name": "adhesion G-protein coupled receptor G7 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020926224", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926224" } ] } ], "function": [ { "annotation": "Orphan receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZK18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18#function" }, { "database": "UniProtKB", "id": "ARBA00035627", "url": "https://www.uniprot.org/uniprotkb/ARBA00035627#function" }, { "database": "UniProtKB", "id": "F1SKZ9", "url": "https://www.uniprot.org/uniprotkb/F1SKZ9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZK18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADGRG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18", "locus": { "chromosome": "13", "start_pos": 158338849, "end_pos": 158408525, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011962", "url": "https://www.ensembl.org/id/ENSSSCG00000011962" } ] } } ], "crossref": [ { "id": "A0A286ZK18", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZK18", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011962", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011962", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "102160124", "url": "https://www.ncbi.nlm.nih.gov/gene/102160124", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000203", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000203", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000832", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000832", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017981", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017981", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046338", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046338", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047938", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047938", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053066", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053066", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053984", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053984", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053985", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053985", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053986", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053986", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102160124", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102160124", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QWELKYR", "url": "https://omabrowser.org/oma/group/QWELKYR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZK18", "url": "https://www.orthodb.org/?gene=A0A286ZK18", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47767", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47767", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47767:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47767:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00002", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00002", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01825", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01825", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22257", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22257", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22259", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22259", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22261", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22261", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020926224", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926224", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZK18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZK18-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BC71", "url": "https://www.uniprot.org/uniprotkb/A0A287BC71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BC71-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BC71-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RHF6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RHF6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RHF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RHF6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKZ9", "url": "https://www.uniprot.org/uniprotkb/F1SKZ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKZ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SKZ9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASCRACDLKVLVATVCGLLTAVVLGLGIWRLVIRIQRETLTPPSSIPVEFCRNGGTWENGRCICPEEWKGLRCTITNFCENSTYGSFTFNRIPVGRYGSSLQTCDKNTLNAGNPVATRLCSLNIYGEIELQNVTIGNCNENLETLEKQIVNISTQSQNISDETRILTSDASKLTPENITSATRVVGQIFNKSRNALPEAKIVAVTTVSQLLDASEDAFQRAAATTNDDTFATLIEQMETYSLSLGNTSVVEPNIAIQSVNFSSEDSGGSTGVLFTVLKGASGSLVSGSTLLNTNVDKLNLNEQAELQILLNTSKTNAKACGFVVYQNNKLFQSKTFITKSEFSQKIVSSKTDQNMENQNASVEMAFSPRYNQKEFQLHSYACVYWNFSMKDWDTYGCHKEGFVDGFLRCRCNHTTNFAVLMSFKKDYKYPKSLDILSNFGCALSITGLALTIIFQVVTRKVRKTSVTWVLVSLCGSMLIFNLLFVFGIENSNKNQQTSKSDTDNIDLSSNEMLREDIIFVSNPKCTVIAALLHYFLLATFTWMGLSAGQLYFLLMRTMKPLPQHFILFLSLIGWGVPAIVVALTVGIIYSQSGNNLQWELNYRQEEICWLAVQEGNDFIKSPLLWSFIVPVTIILISNIVIFIVIAVKVLWRNNQNLTSTKKVSSLKKILSTLSIAVVFGITWILAYLMLMNNDDIRIIFSYIFCLFNTTQGLQIFILYTVRTKIFQNKASTVLKSLSSSAGKVKVLPSMSPLRLRVRMYNMLRSFPALYGRFRLLDPSVLTEEMTDPESDQADGQ", "length": 797, "header": "tr|A0A286ZK18-1|A0A286ZK18_PIG Isoform 1 of Adhesion G-protein coupled receptor G7 OS=Sus scrofa OX=9823 GN=ADGRG7 PE=1 SV=1 CANONICAL=A0A286ZK18-1" }, "isoforms": [ { "isoform_ac": "A0A286ZK18-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18/entry#A0A286ZK18-1", "sequence": { "sequence": "MASCRACDLKVLVATVCGLLTAVVLGLGIWRLVIRIQRETLTPPSSIPVEFCRNGGTWENGRCICPEEWKGLRCTITNFCENSTYGSFTFNRIPVGRYGSSLQTCDKNTLNAGNPVATRLCSLNIYGEIELQNVTIGNCNENLETLEKQIVNISTQSQNISDETRILTSDASKLTPENITSATRVVGQIFNKSRNALPEAKIVAVTTVSQLLDASEDAFQRAAATTNDDTFATLIEQMETYSLSLGNTSVVEPNIAIQSVNFSSEDSGGSTGVLFTVLKGASGSLVSGSTLLNTNVDKLNLNEQAELQILLNTSKTNAKACGFVVYQNNKLFQSKTFITKSEFSQKIVSSKTDQNMENQNASVEMAFSPRYNQKEFQLHSYACVYWNFSMKDWDTYGCHKEGFVDGFLRCRCNHTTNFAVLMSFKKDYKYPKSLDILSNFGCALSITGLALTIIFQVVTRKVRKTSVTWVLVSLCGSMLIFNLLFVFGIENSNKNQQTSKSDTDNIDLSSNEMLREDIIFVSNPKCTVIAALLHYFLLATFTWMGLSAGQLYFLLMRTMKPLPQHFILFLSLIGWGVPAIVVALTVGIIYSQSGNNLQWELNYRQEEICWLAVQEGNDFIKSPLLWSFIVPVTIILISNIVIFIVIAVKVLWRNNQNLTSTKKVSSLKKILSTLSIAVVFGITWILAYLMLMNNDDIRIIFSYIFCLFNTTQGLQIFILYTVRTKIFQNKASTVLKSLSSSAGKVKVLPSMSPLRLRVRMYNMLRSFPALYGRFRLLDPSVLTEEMTDPESDQADGQ", "length": 797, "header": "tr|A0A286ZK18-1|A0A286ZK18_PIG Isoform 1 of Adhesion G-protein coupled receptor G7 OS=Sus scrofa OX=9823 GN=ADGRG7 PE=1 SV=1 CANONICAL=A0A286ZK18-1" }, "locus": { "chromosome": "13", "start_pos": 158402491, "end_pos": 158340067, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061723.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061723.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031811.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031811.1" } ] } }, { "isoform_ac": "A0A287BC71-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18/entry#A0A287BC71-1", "sequence": { "sequence": "MASCRACDLKVLVATVCGLLTAVVLGLGIWRLVIRIQRETLTPPSSIPVEFCRNGGTWENGRCICPEEWKGLRCTITNFCENSTYGSFTFNRIPVGRYGSSLQTCDKNTLNAGNPVATRLCSLNIYGEIELQNVTIGNCNENLETLEKQIVNISTQSQNISDETRILTSDASKLTPENITSATRVVGQIFNKSRNALPEAKIVAVTTVSQLLDASEDAFQRAAATTNDDTFATLIEQMETYSLSLGNTSVVEPNIAIQSVNFSSEDSGGSTGVLFTVLKGASGSLVSGSTLLNTNVDKLNLNEQAELQILLNTSKTNAKACGFVVYQNNKLFQSKTFITKSEFSQKIVSSKTDQNMENQNASVEMAFSPRYNQKEFQLHSYACVYWNFSMKDWDTYGCHKEGFVDGFLRCRCNHTTNFAVLMSFKKDYKYPKSLDILSNFGCALSITGLALTIIFQVVTRKVRKTSVTWVLVSLCGSMLIFNLLFVFGIENSNKNQQTTTFTWMGLSAGQLYFLLMRTMKPLPQHFILFLSLIGWGVPAIVVALTVGIIYSQSGNNLQWELNYRQEEICWLAVQEGNDFIKSPLLWSFIVPVTIILISNIVIFIVIAVKVLWRNNQNLTSTKKVSSLKKILSTLSIAVVFGITWILAYLMLMNNDDIRIIFSYIFCLFNTTQGLQIFILYTVRTKIFQNKASTVLKSLSSSAGKVKVLPSMSPLRLRVRMYNMLRSFPALYGRFRLLDPSVLTEEMTDPESDQADGQ", "length": 757, "header": "tr|A0A287BC71-1|A0A287BC71_PIG Computationally mapped isoform of Adhesion G protein-coupled receptor G7 OS=Sus scrofa OX=9823 GN=ADGRG7 PE=1 SV=1 CANONICAL=A0A286ZK18-1" }, "locus": { "chromosome": "13", "start_pos": 158402491, "end_pos": 158340067, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066299.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066299.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053948.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053948.1" } ] } }, { "isoform_ac": "A0A5G2RHF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18/entry#A0A5G2RHF6-1", "sequence": { "sequence": "MASCRACDLKVLVATVCGLLTAVVLGLGIWRLVIRIQRETLTPPSSIPVEFCRNGGTWENGRCICPEEWKGLRCTITNFCENSTYGSFTFNRIPVGRYGSSLQTCDKNTLNAGNPVATRLCSLNIYGEIELQNVTIGNCNENLETLEKQIVNISTQSQNISDETRILTSDASKLTPENITSATRVVGQIFNKSRNALPEAKIVAVTTVSQLLDASEDAFQRAAATTNDDTFATLIEQMETYSLSLGNTSVVEPNIAIQSVNFSSEDSGGSTGVLFTVLKGASGSLVSGSTLLNTNVDKLNLNEQAELQILLNTSKTNAKACGFVVYQNNKLFQSKTFITKSEFSQKIVSSKTDQNMENQNASVEMAFSPRYNQKEFQLHSYACVYWNFSMKDWDTYGCHKEGFVDGFLRCRCNHTTNFAVLMSFKKDYKYPKSLDILSNFGCALSITGLALTIIFQVVTRKVRKTSVTWVLVSLCGSMLIFNLLFVFGIENSNKNQQTSKSDTDNIDLSSNEMLREDIIFVSNPKCTVIAALLHYFLLATFTWMGLSAGQLYFLLMRTMKPLPQHFILFLSLIGWCWLAVQEGNDFIKSPLLWSFIVPVTIILISNIVIFIVIAVKVLWRNNQNLTSTKKVSSLKKILSTLSIAVVFGITWILAYLMLMNNDDIRIIFSYIFCLFNTTQGLQIFILYTVRTKIFQNKASTVLKSLSSSAGKVKVLPSMSPLRLRVRMYNMLRSFPALYGRFRLLDPSVLTEEMTDPESDQAW", "length": 762, "header": "tr|A0A5G2RHF6-1|A0A286ZK18_PIG Computationally mapped isoform of Adhesion G-protein coupled receptor G7 OS=Sus scrofa OX=9823 GN=ADGRG7 PE=1 SV=2 CANONICAL=A0A286ZK18-1" }, "locus": { "chromosome": "13", "start_pos": 158402491, "end_pos": 158340076, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071073.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071073.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070776.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070776.2" } ] } }, { "isoform_ac": "F1SKZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK18/entry#F1SKZ9-1", "sequence": { "sequence": "MLQVRNPHPPNPKSIQSRGNQEKRGGIKKETLTPPSSIPVEFCRNGGTWENGRCICPEEWKGLRCTITNFCENSTYGSFTFNRIPVGRYGSSLQTCDKNTLNAGNPVATRLCSLNIYGEIELQNVTIGNCNENLETLEKQIVNISTQSQNISDETRILTSDASKLTPENITSATRVVGQIFNKSRNALPEAKIVAVTTVSQLLDASEDAFQRAAATTNDDTFATLIEQMETYSLSLGNTSVVEPNIAIQSVNFSSEDSGGSTGVLFTVLKGASGSLVSGSTLLNTNVDKLNLNEQAELQILLNTSKTNAKACGFVVYQNNKLFQSKTFITKSEFSQKIVSSKTDQNMENQNASVEMAFSPRYNQKEFQLHSYACVYWNFSMKDWDTYGCHKEGFVDGFLRCRCNHTTNFAVLMSFKKDYKYPKSLDILSNFGCALSITGLALTIIFQVVTRKVRKTSVTWVLVSLCGSMLIFNLLFVFGIENSNKNQQTSKSDTDNIDLSSNEMLREDIIFVSNPKCTVIAALLHYFLLATFTWMGLSAGQLYFLLMRTMKPLPQHFILFLSLIGWGVPAIVVALTVGIIYSQSGNNLQWELNYRQEEICWLAVQEGNDFIKSPLLWSFIVPVTIILISNIVIFIVIAVKVLWRNNQNLTSTKKVSSLKKILSTLSIAVVFGITWILAYLMLMNNDDIRIIFSYIFCLFNTTQGLQIFILYTVRTKIFQNKASTVLKSLSSSAGKVKVLPSMSPLRLRVRMYNMLRSFPALYGRFRLLDPSVLTEEMTDPESDQADGQ", "length": 788, "header": "tr|F1SKZ9-1|A0A286ZK18_PIG Computationally mapped isoform of Adhesion G-protein coupled receptor G7 OS=Sus scrofa OX=9823 GN=ADGRG7 PE=1 SV=3 CANONICAL=A0A286ZK18-1" }, "locus": { 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"https://www.uniprot.org/uniprotkb/A0A287AJX2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2S8", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2S8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2S8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3W5", "url": "https://www.uniprot.org/uniprotkb/A0A287B3W5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3W5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3W5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDP5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDP5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDP5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYQVPLPLDRDGTLVRLRFTLVAVVMVCCPLIAFFFCILWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNYYLSCAFPGPCYRQLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTVSPEDRKSYNWKQRLFIINFVSFFTALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIASQPEEKRF", "length": 254, "header": "tr|A0A286ZK90-1|A0A286ZK90_PIG Isoform 1 of Acyltransferase PGAP2 OS=Sus scrofa OX=9823 GN=PGAP2 PE=4 SV=1 CANONICAL=A0A286ZK90-1" }, "isoforms": [ { "isoform_ac": "A0A286ZK90-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90/entry#A0A286ZK90-1", "sequence": { "sequence": "MYQVPLPLDRDGTLVRLRFTLVAVVMVCCPLIAFFFCILWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNYYLSCAFPGPCYRQLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTVSPEDRKSYNWKQRLFIINFVSFFTALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIASQPEEKRF", "length": 254, "header": "tr|A0A286ZK90-1|A0A286ZK90_PIG Isoform 1 of Acyltransferase PGAP2 OS=Sus scrofa OX=9823 GN=PGAP2 PE=4 SV=1 CANONICAL=A0A286ZK90-1" }, "locus": { "chromosome": "9", "start_pos": 6308420, "end_pos": 6296889, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052390.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052390.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031988.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031988.1" } ] } }, { "isoform_ac": "A0A287ACZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90/entry#A0A287ACZ9-1", "sequence": { "sequence": "MYQVPLPLDRDGTLVRLRFTLVAVVMVCCPLIAFFFCILWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNYYLSCAFPGPCYRQLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTDRKSYNWKQRLFIINFVSFFTALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIASQPEEKRF", "length": 250, "header": "tr|A0A287ACZ9-1|A0A287ACZ9_PIG Computationally mapped isoform of Acyltransferase PGAP2 OS=Sus scrofa OX=9823 GN=PGAP2 PE=4 SV=1 CANONICAL=A0A286ZK90-1" }, "locus": { "chromosome": "9", "start_pos": 6308420, "end_pos": 6296889, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053251.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053251.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041879.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041879.2" } ] } }, { "isoform_ac": "A0A287AJX2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90/entry#A0A287AJX2-1", "sequence": { "sequence": "VATSGGVGRRVMTLYQGSAPSFGAERLRRLRLGPIRVKTPGWHGWNAAERSDKMYQVPLPLDRDGTLVRLRFTLVAVVMVCCPLIAFFFCILWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNYYLSCAFPGPCYRQLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTVSPEDRKSYNWKQRLFIINFVSFFTALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIASQPEEKRF", "length": 307, "header": "tr|A0A287AJX2-1|A0A287AJX2_PIG Computationally mapped isoform of Acyltransferase PGAP2 OS=Sus scrofa OX=9823 GN=PGAP2 PE=4 SV=2 CANONICAL=A0A286ZK90-1" }, "locus": { "chromosome": "9", "start_pos": 6319327, "end_pos": 6296889, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062799.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062799.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044308.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044308.2" } ] } }, { "isoform_ac": "A0A287B2S8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90/entry#A0A287B2S8-1", "sequence": { "sequence": "MGPWSGFASPWWPWSWSAVHLSPSSSASSGPCSSTSRRLRPHTAGMFSAASQPLDPDGTVFRLRFTAMIWWVITFPVFGFFFCIIWSLVFHFEYTVATDCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNYYLSCAFPGPCYRQLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTDRKSYNWKQRLFIINFVSFFTALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIASQPEEKRF", "length": 296, "header": "tr|A0A287B2S8-1|A0A287B2S8_PIG Computationally mapped isoform of Acyltransferase PGAP2 OS=Sus scrofa OX=9823 GN=PGAP2 PE=4 SV=1 CANONICAL=A0A286ZK90-1" }, "locus": { "chromosome": "9", "start_pos": 6308389, "end_pos": 6296889, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043647.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043647.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050407.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050407.2" } ] } }, { "isoform_ac": "A0A287B3W5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90/entry#A0A287B3W5-1", "sequence": { "sequence": "MMYQVPLPLDRDGTLVRLRFTLVAVVMVCCPLIAFFFCILWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNYYLSCAFPGPCYRQLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTVSPEDRKSYNWKQRLFIINFVSFFTALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIASQPEEKRF", "length": 255, "header": "tr|A0A287B3W5-1|A0A287B3W5_PIG Computationally mapped isoform of Acyltransferase PGAP2 OS=Sus scrofa OX=9823 GN=PGAP2 PE=4 SV=1 CANONICAL=A0A286ZK90-1" }, "locus": { "chromosome": "9", "start_pos": 6319200, "end_pos": 6296889, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040252.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040252.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051171.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051171.2" } ] } }, { "isoform_ac": "A0A5G2QDP5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90/entry#A0A5G2QDP5-1", "sequence": { "sequence": "MYQVPLPLDRDGTLVRLRFTLVAVVMVCCPLIAFFFCILWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNYYLSCAFPGPCYRQLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTVSPEVRSTPGGGGARAAPRKLRDAGPRDAGPGEAGAGFY", "length": 210, "header": "tr|A0A5G2QDP5-1|A0A286ZK90_PIG Computationally mapped isoform of Acyltransferase PGAP2 OS=Sus scrofa OX=9823 GN=PGAP2 PE=4 SV=1 CANONICAL=A0A286ZK90-1" }, "locus": { "chromosome": "9", "start_pos": 6308420, "end_pos": 6297815, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087605.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087605.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062263.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062263.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QDP5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDP5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A6H7B8-1", "protein_name": "Acyltransferase PGAP2", "gene_name": "PGAP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MYQVPLPLDRDGTLVRLRFTLVALVTVCCPLVAFLFCVLWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCAGYRPLCRLNFGLNVVENVALLVLTYVSSSEDFTIHENAFIVFIASSLSHMLLTCILWRLTKKHTVSQEDRKSYNWKQRLFIINFVSFFTALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITSQPEEKRF", "length": 254 }, "evidence": [ { "id": "A0A286ZK90", "url": "https://omabrowser.org/oma/group/A0A286ZK90/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q2ABP3-1", "protein_name": "Acyltransferase PGAP2", "gene_name": "Pgap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYQVPLTLDRDGTLVRLRFTMVALITVCCPLVAFFFCILWSLLFHFKETTSTHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLTAFAYWNHYLSCASPCPGYRLLCRLNFSLNVVENLALLVLTYVSSSEDFTIHENAFIVFIAASLSYMLLTCILWRLTKKHTVSQEDRKSYSWKQRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITSQPEEKRF", "length": 254 }, "evidence": [ { "id": "A0A286ZK90", "url": "https://omabrowser.org/oma/group/A0A286ZK90/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3TQR0-1", "protein_name": "Acyltransferase PGAP2", "gene_name": "Pgap2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MYQVPLTLDRDGTLVRLRFTMVALITVCCPLVAFFFCILWSLLFHFKETTSTHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLTAFAYWNHYLSCASPCPGYRLLCRINFSLNVVENLALLVLTYVSSSEDFTIHENAFIVFIAASLGYMLLTCILWRLTKKHTVSQEDRKSYSWKQRLFVINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITSQPEEKRF", "length": 254 }, "evidence": [ { "id": "A0A286ZK90", "url": "https://omabrowser.org/oma/group/A0A286ZK90/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54J51-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFKLSASLLPLSYGIIAMGSFITTLFLACYLHFERVTKNHCKMYEFLPSISSTIGDFSPEMNVYRYGMALTSGLRLGTIYLNHHVSTEEKNNLLAQSNSGRKSFTSSSVLESVRRLGYLIPMSTVFDTIRVFSAGGWIYISSSEHLFSHQVGFVSYVIFSFLYMYTHCAVLYHTKIKFRAGFENQSISSIIFKGNYSPKTQKDLFSFKWKAILGIAHFLLFVGSLKYFVDHTFYCVYLSYSKYSIFEWLLATTNILYDTLTYLDFDGLYFTLHREKKSSI", "length": 281 }, "evidence": [ { "id": "A0A286ZK90", "url": "https://omabrowser.org/oma/group/A0A286ZK90/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5BL33-1", "protein_name": "Acyltransferase PGAP2", "gene_name": "pgap2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MQQVPYGSVDRDKPLIRVPFTRLAVITVCLPLLGLVACIVLAMLYHYNDATYTHCQVPNYLPSISAAISLTPERYIWRFSIGLHSAPRFLVAAAYLSFYRGRFSRRLTEQLLSGFTFLLALSENVGLLLLTYVSSTETYSVHKSGFILFIGSSLFHMLCTCKLWSLIVKYSISSEEMMSYWFKLRLFLFNGGCCVLAVYFYRRHNTYCEEGITHASRCVSIWWCCPTWPST", "length": 231 }, "evidence": [ { "id": "A0A286ZK90", "url": "https://omabrowser.org/oma/group/A0A286ZK90/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9UHJ9-1", "protein_name": "Acyltransferase PGAP2", "gene_name": "PGAP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTVSQEDRKSYSWKQRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITSQPEEKRF", "length": 254 }, "evidence": [ { "id": "A0A286ZK90", "url": "https://omabrowser.org/oma/group/A0A286ZK90/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VPT7-1", "protein_name": "Post-GPI attachment to proteins factor 2", "gene_name": "PGAP2", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLPTYERFSDPKSVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRSTYTHCDVTNYLPSVSAAIGNYEPQKTVWRLAIFLHLPLRLAVAKIYLEHYREHIRRSRRLLGILACFLNVVEDLALFCLSFWTSADHYETHRNAFVVFIACSECYMLVSYLLNRNIQKTVLLPHEEKSLRYKRNLFLVNVIAFGLAGYCFVRHNSHCEAGVYTFFALFEYIVVLTNMGFHMTSYWDFYALNVVCDAKHGLYLSQS", "length": 255 }, "evidence": [ { "id": "A0A286ZK90", "url": "https://omabrowser.org/oma/group/A0A286ZK90/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZK90", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZK90", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "GPI anchor biosynthetic process", "id": "GO:0006506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006506", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZK90", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "83851", "name": "", "equation": "[protein]-C-terminal carboxyl phosphoethanolamide-lysoGPI(deacylinositol-H7) + octadecanoyl-CoA = [protein]-C-terminal carboxyl phosphoethanolamide-(1-radyl,2-octadecanoyl)-GPI(deacylinositol-H7) + CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "83851", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/83851" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZK90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK90" }, { "id": "PF10277", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10277" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CWH43-like N-terminal", "eco_id": "ECO_0000259", "start_pos": 19, "end_pos": 240, "start_aa": "Phe", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], 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"publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKB1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKB1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", 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"A0A286ZKB1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKB1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKB1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKB1" } ], "pmid": "" }, { "name": "intestinal cholesterol absorption", "id": "GO:0030299", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030299", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKB1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKB1" } ], "pmid": "" }, { "name": "pancreatic juice secretion", "id": "GO:0030157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030157", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKB1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKB1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 281, "end_pos": 283, "annotation": "n_glycosylation_sequon" }, { "start_pos": 455, "end_pos": 457, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "10100", "name": "", "equation": "a sterol ester + H2O = a sterol + a fatty acid + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "10100", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/10100" } ] }, { "id": "12044", "name": "", "equation": "a triacylglycerol + H2O = a diacylglycerol + a fatty acid + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "12044", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/12044" } ] }, { "id": "12957", "name": "", "equation": "an acetyl ester + H2O = an aliphatic alcohol + acetate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "12957", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/12957" } ] }, { "id": "33875", "name": "", "equation": "cholesteryl (9Z-octadecenoate) + H2O = cholesterol + (9Z)-octadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "33875", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/33875" } ] }, { "id": "38575", "name": "", "equation": "1,2,3-tri-(9Z-octadecenoyl)-glycerol + H2O = di-(9Z)-octadecenoylglycerol + (9Z)-octadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "38575", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/38575" } ] }, { "id": "40435", "name": "", "equation": "1-hexadecanoyl-sn-glycero-3-phosphocholine + H2O = sn-glycerol 3-phosphocholine + hexadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40435", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40435" } ] }, { "id": "47348", "name": "", "equation": "a butanoate ester + H2O = an aliphatic alcohol + butanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "47348", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/47348" } ] }, { "id": "47864", "name": "", "equation": "1,2,3-trioctanoylglycerol + H2O = dioctanoylglycerol + octanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "47864", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/47864" } ] }, { "id": "52048", "name": "", "equation": "9-(9Z-octadecenoyloxy)-octadecanoate + H2O = 9-hydroxy-octadecanoate + (9Z)-octadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52048", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52048" } ] }, { "id": "52052", "name": "", "equation": "9-hexadecanoyloxy-octadecanoate + H2O = 9-hydroxy-octadecanoate + hexadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52052", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52052" } ] }, { "id": "52056", "name": "", "equation": "12-hexadecanoyloxy-octadecanoate + H2O = 12-hydroxyoctadecanoate + hexadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52056", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52056" } ] }, { "id": "52060", "name": "", "equation": "12-(9Z-octadecenoyloxy)-octadecanoate + H2O = 12-hydroxyoctadecanoate + (9Z)-octadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52060", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52060" } ] }, { "id": "52064", "name": "", "equation": "13-(9Z-octadecenoyloxy)-octadecanoate + H2O = 13-hydroxy-octadecanoate + (9Z)-octadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52064", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52064" } ] }, { "id": "52068", "name": "", "equation": "9-(9Z-hexadecenoyloxy)-octadecanoate + H2O = (9Z)-hexadecenoate + 9-hydroxy-octadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52068", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52068" } ] }, { "id": "52072", "name": "", "equation": "12-(9Z-hexadecenoyloxy)-octadecanoate + H2O = 12-hydroxyoctadecanoate + (9Z)-hexadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52072", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52072" } ] }, { "id": "52076", "name": "", "equation": "13-(9Z-hexadecenoyloxy)-octadecanoate + H2O = 13-hydroxy-octadecanoate + (9Z)-hexadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52076", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52076" } ] }, { "id": "52080", "name": "", "equation": "12-octadecanoyloxy-octadecanoate + H2O = 12-hydroxyoctadecanoate + octadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52080", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52080" } ] }, { "id": "52084", "name": "", "equation": "13-octadecanoyloxy-octadecanoate + H2O = 13-hydroxy-octadecanoate + octadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52084", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52084" } ] }, { "id": "52092", "name": "", "equation": "5-(9Z-hexadecenoyloxy)-octadecanoate + H2O = 5-hydroxy-octadecanoate + (9Z)-hexadecenoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "52092", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/52092" } ] }, { "id": "52096", "name": "", 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improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKC7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6783310", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6783310", "resource": "Reactome", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45964", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45964:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45964:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01822", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01822", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020928070", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928070", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKC8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYS0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYS0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYS0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKLWFKFQRYFRRKPVRFFTFLVLYLTAGSLVFLHSGFVGQPAVSQNQANPAVGAPAEGAELPFLGDFNLGRGFRDTGEASSIARRYGPWFKGKDGNERTKLVDYGGAWSRALKGRVIREKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTIFRCQDNCAERGYLYAGLEFGAECYCGHKIQATNVSEAECDMDCKGERGSVCGGANRLSVYRLQLAQESARRYGSAVFRGCFRRPDNLSLALPVTAAMPNMSVDKCVDLCTEKEYPLAALAGTACHCGFPTTRFPLHEREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKKLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKKVLVVHFEDLKQDLFVQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYNPYTADMQKTISAYIKMVDAALKGRNLTGVPDDYYPR", "length": 564, "header": "tr|A0A286ZKC8-1|A0A286ZKC8_PIG Isoform 1 of WSC domain containing 2 OS=Sus scrofa OX=9823 GN=WSCD2 PE=3 SV=1 CANONICAL=A0A286ZKC8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC8/entry#A0A286ZKC8-1", "sequence": { "sequence": "MAKLWFKFQRYFRRKPVRFFTFLVLYLTAGSLVFLHSGFVGQPAVSQNQANPAVGAPAEGAELPFLGDFNLGRGFRDTGEASSIARRYGPWFKGKDGNERTKLVDYGGAWSRALKGRVIREKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTIFRCQDNCAERGYLYAGLEFGAECYCGHKIQATNVSEAECDMDCKGERGSVCGGANRLSVYRLQLAQESARRYGSAVFRGCFRRPDNLSLALPVTAAMPNMSVDKCVDLCTEKEYPLAALAGTACHCGFPTTRFPLHEREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKKLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKKVLVVHFEDLKQDLFVQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYNPYTADMQKTISAYIKMVDAALKGRNLTGVPDDYYPR", "length": 564, "header": "tr|A0A286ZKC8-1|A0A286ZKC8_PIG Isoform 1 of WSC domain containing 2 OS=Sus scrofa OX=9823 GN=WSCD2 PE=3 SV=1 CANONICAL=A0A286ZKC8-1" }, "locus": { "chromosome": "14", "start_pos": 42533543, "end_pos": 42490859, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063440.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063440.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031913.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031913.1" } ] } }, { "isoform_ac": "A0A5G2QYS0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC8/entry#A0A5G2QYS0-1", "sequence": { "sequence": "MAKLWFKFQRYFRRKPVRFFTFLVLYLTAGSLVFLHSGFVGQPAVSQNQANPAVGAPAEGAELPFLGDFNLGRGFRDTGEASSIARRYGPWFKGKDGNERTKLVDYGGAWSRALKGRVIREKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTIFRCQDNCAERGYLYAGLEFGAECYCGHKIQATNVSEAECDMDCKGERGSVCGGANRLSVYRLQLAQESARRYGSAVFRGCFRRPDNLSLALPVTAAMPNMSVDKCVDLCTEKEYPLAALAGTACHCGFPTTRFPLHEREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKKLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKKVLVVHFEDLKQDLFVQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYNPYTADMQKTISAYIKMVDAALKGRNLTGVPDDYYPRCKGTQLSDAETSNQRIPKDSSHRSSVLESTDPGSHLSPHIGYQRFCIQRTPAHLHHPPPCRCKSHRSQVSAVLSGAAPSLQEDPSAALACG", "length": 655, "header": "tr|A0A5G2QYS0-1|A0A286ZKC8_PIG Computationally mapped isoform of WSC domain containing 2 OS=Sus scrofa OX=9823 GN=WSCD2 PE=3 SV=1 CANONICAL=A0A286ZKC8-1" }, "locus": { "chromosome": "14", "start_pos": 42533543, "end_pos": 42489438, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074194.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074194.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070023.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070023.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QYS0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYS0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154616", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154616", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K1I1-1", "protein_name": "WSC domain containing 2", "gene_name": "Wscd2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKLWFKFQRCFRYFRRKPVRFFTLLAIYLTAGSLVFLHSGFVGQPSVPQSQASPAAGSPAEGGAELPFLGDLHLGRGFRDTVEASSIARRFGPTFKGKDTSERAKLGDYGGAWSRALKGRVVREKEKEKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTVFRCQDNCAERGYLYAGLEFGAECYCGHKIQAANVSEADCDMDCKGERGSVCGGINRLSVYRLQLAQESARRYGSAVFRGCFRRPNNLSLALPVTVAMPNMSVDKCVDLCTEKEFPLAALAGTACHCGFPTTRFPLHDREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKKLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDSAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKTVLVVHFEDLKQDLFTQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYDPYTAEMRRTIAAYIRMVDTALRSRNLTGVPEAYGPR", "length": 572 }, "evidence": [ { "id": "A0A286ZKC8", "url": "https://omabrowser.org/oma/group/A0A286ZKC8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZHH4-1", "protein_name": "WSC domain containing 2", "gene_name": "WSCD2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQNPPQRRASPWPSRRDEDAMAKLWVKFQRSFRRRPVRFFTLLALYLAAGSLVFLHAGFTGEPRVAGSQRSPGAGEGLGLPYLGATRLSRGFSEVTVGRRRGHWFKGMAKEPAERSRAGDYGAARSRAPKGRGGRDKEEDRARYIGCYVDNTRSRTLRGVSFFDYKKMTVFRCQDNCAERGYLYAGLEFGAECYCGHKVQAPNASESECNMECKGERSSTCGGANRLSIYRLELAQESARRYGSAIFRGCFRQPDNVSIALPASQPMPNMSVDKCVDFCTEKEFPLSALAGTVCRCGFPTTLFPLHEREDEQLCAQRCAGEEFESCGTTEFLLVYQTQVQDNRCMDRRFLPMRSKQLVALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWRGKEWPEFVANYAPWWATHTLDWLRFGRKVLVVHFEDLKQDLFTQLKRMVGLLGIAACEDRLLCVEGQKDGNFKRSGLRKLEYDPYTPEMRKMISGYIRTVDAALKLRNLSGVPDDYYPRRDGDNSTKEEHNMRSSTLGCTEVRWS", "length": 605 }, "evidence": [ { "id": "A0A286ZKC8", "url": "https://omabrowser.org/oma/group/A0A286ZKC8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A2BGL3-1", "protein_name": "Sialate:O-sulfotransferase 2", "gene_name": "wscd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARSLLKIHRYFRRKPVRFFSFILLYLTAGSLVFLHSGFSSDSSTAGIAGSGSDPLLSEGRGGTGGGSATSEGLGLLGRVFKETRRTPRRFGPPWMKESRGQDAPEWAGRGFDHTSSWSHGAKGRTTKEMDDGRAKYIGCYVDDTQKRALRGVSFLDYKKMTVFRCQDNCAERGYLYAGLEFGAECYCGHKIQAPNVSESECNMECKGEKSNLCGGPNRLSIYRLELSQESARRYGSAIFKGCFRRPDNVTLALPASAVMQNMSVDKCVDMCTEKEFSLAALAGDKCHCGFPTPLFNLHEHEDEELCLHRCTGEDFESCGNRDFFVVYQTQVQDNRCMDRRFLPTRSKHLMALASFPGAGNTWARHLIELATGYYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGKKEIETFDASILMIRNPYKALMAEFNRKYGGHIGFASQAHWRGKEWPEFVKNYAPWWASHTLDWLKYGKKVQVVHFEDLKRDLFSQLKGMVIFLGLEVSEDRLLCVEGQKDGNFKRSGLRKLEYDPYTVEMRATIDRLIKTVDMELRKRNLSGVPDEYRPR", "length": 572 }, "evidence": [ { "id": "A0A286ZKC8", "url": "https://omabrowser.org/oma/group/A0A286ZKC8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D4PHA7-1", "protein_name": "Sialate:O-sulfotransferase 2", "gene_name": "Wscd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKLWFKFQRCFRYFRRKPVRFFTLLAIYLTAGSLVFLHSGFVGQPAVPQSQASPAAGSPVEGAELPFLGDLHLGRGFRDTVEASSIARRYGPTFKGKDTSERAKLGDYGGAWSRALKGRVVREKEKEKEEEKAKYIGCYLDDTQSRALRGVSFFDYKKMTVFRCQDNCAERGYLYAGLEFGAECYCGHKIQAANVSESDCDMECKGERGSVCGGINRLSVYRLQLAQESARRYGSAVFRGCFRRPNNLSLALPVSAAMPNMSVDKCVDLCTEKEFPLAALAGTACHCGFPTTRFPLHDREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKKLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKTVLVVHFEDLKQDLFTQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYDPYTAEMRRTIAAYIRMVDTALRSRNLTGVPDAYGPR", "length": 571 }, "evidence": [ { "id": "A0A286ZKC8", "url": "https://omabrowser.org/oma/group/A0A286ZKC8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1MIR3-1", "protein_name": "WSC domain containing 2", "gene_name": "WSCD2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAKLWFKFQRYFRRKPVRFFTFLVLYLTAGSLVFLHSGFVGQPAVSQNQANPAVGAPVEGAELTFLGDLNLGRGFRDTGEVSSIARRYGPWFKGKDGNERAKLGDYGGAWSRALKGRVVREKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTVFRCQDNCAERGYLYAGLEFGAECYCGHKIQAANVSEAECDMDCKGERGSVCGGANRLSVYRLQLAQESARRYGSAVFRGCFRRPDNLSLALPVTAAMPNMSVDKCVDLCTEKEYPLAALAGTACHCGFPTTRFPLHEREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKQLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKKVLVVHFEDLKRDLFVQLGRMVGLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYDPYTADMQRTISAYIKTVDAALRGRNLTGVPDDYYPR", "length": 564 }, "evidence": [ { "id": "A0A286ZKC8", "url": "https://omabrowser.org/oma/group/A0A286ZKC8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HVJ1-1", "protein_name": "WSC domain-containing protein 2", "gene_name": "Wscd2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKLWFKFQRCFRYFRRKPVRFFTLLALYLTAGSLVFLHSGFVGQPAVPQSQASPPAGSPAEGAELPFLGDLHLGRSFRDTGEASSIARRYGPSFKGKETSERAKLGDYGGAWSRALKGRVVREKEKEKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTVFRCQDNCAERGYLYAGLEFGAECYCGHKIQAANVSEAECDMDCKGERGSVCGGVNRLSVYRLQLAQESARRYGSAVFRGCFRRPNNLSLALPVTAAMPNMSVDKCVDLCTEKEYPLAALAGTACHCGFPTTRFPLHDREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPAKSKKLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKTVLVVHFEDLKQDLFAQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYDPYTAEMRRTIAAYIRMVDTALRSRNLTGVPDAYGPR", "length": 571 }, "evidence": [ { "id": "A0A286ZKC8", "url": "https://omabrowser.org/oma/group/A0A286ZKC8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q2TBF2-1", "protein_name": "Sialate:O-sulfotransferase 2", "gene_name": "WSCD2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKLWFKFQRYFRRKPVRFFTFLALYLTAGSLVFLHSGFVGQPAVSGNQANPAAAGGPAEGAELSFLGDMHLGRGFRDTGEASSIARRYGPWFKGKDGNERAKLGDYGGAWSRALKGRVVREKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTIFRCQDNCAERGYLYGGLEFGAECYCGHKIQATNVSEAECDMECKGERGSVCGGANRLSVYRLQLAQESARRYGSAVFRGCFRRPDNLSLALPVTAAMLNMSVDKCVDFCTEKEYPLAALAGTACHCGFPTTRFPLHDREDEQLCAQKCSAEEFESCGTPSYFIVYQTQVQDNRCMDRRFLPGKSKQLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEIEAFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWLKFGKKVLVVHFEDLKQDLFVQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYDPYTADMQKTISAYIKMVDAALKGRNLTGVPDDYYPR", "length": 565 }, "evidence": [ { "id": "A0A286ZKC8", "url": "https://omabrowser.org/oma/group/A0A286ZKC8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "sulfotransferase activity", "id": "GO:0008146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008146", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKC8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKC8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 188, "end_pos": 190, "annotation": "n_glycosylation_sequon" }, { "start_pos": 241, "end_pos": 243, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 553, "end_pos": 555, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZKC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKC8" }, { "id": "PS51212", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51212" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "WSC", "eco_id": "ECO_0000259", "start_pos": 126, "end_pos": 218, "start_aa": "Arg", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 188, "end_pos": 190 }, { "start_pos": 241, "end_pos": 243 }, { "start_pos": 254, "end_pos": 256 }, { "start_pos": 553, "end_pos": 555 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"MEELQRAYSRLCKESGAEPQSLTLDTCRALGKLLQKEALLTELVLSDCMLSDEGATMLLQGLCVNTVVRFLDLKGNNLRAAGAEALGKLLRQNKSIQSLTLEWNSLGPWEDAFATFCGALAANSTLRQLDLRNNQISHKGAEELALALRSNASLQQLDLRWNHIGLLGGRALANCLPSNRTLWRLELAGNSIPSDVLRAVEQAMDRNQDRQATVRESQARAHILSKEVQHLREEKSKQFLDLMETIDRQRQEMAKSSTASAARVGRLQEALSERHSVISALKAKLQMAEAALALSEQKARDLGERLATAEQEQRSLAQRQAKEHRLELQEAADRESKLLRDLSAAQEKNLRLRNQVDELERKVKSQQEQLFLSRQELTTTSAELKMRAAQAEERLELEKTRSRQNLEDAEHLRFKEVEHMTRHLEESEKAMQDRVQRLEAVRLSLEEELSQVKAAALSERGRAEEELLKAKSQVRLEEQQRLAHLEEKLRLLAQARDEAQSACLQQKQMVADAQARASQLGLQVEGLRRRLEELQQELSNKDQEKAAEVTRVRLELQEQNGRLQAELTAQEALKEKAAALERQLKVIASDHREALLDRESENASLREKLRLKEAEIARIREEEAQRASFLQNAVLAYVQGSPLRTLSPPK", "length": 650, "header": "tr|A0A286ZKH0-1|A0A286ZKH0_PIG Isoform 1 of Leucine rich repeat containing 45 OS=Sus scrofa OX=9823 GN=LRRC45 PE=4 SV=3 CANONICAL=A0A286ZKH0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKH0/entry#A0A286ZKH0-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCT00000048297.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032068.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032068.3" } ] } }, { "isoform_ac": "A0A287A9P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKH0/entry#A0A287A9P1-1", "sequence": { "sequence": "MEELQRAYSRLCKESGAEPQEAVLQRLHGLLRGRLDLATQSLTLDTCRALGKLLQKEALLTELVLSDCMLSDEGATMLLQGLCVNTVVRFLDLKGNNLRAAGAEALGKLLRQNKSIQSLTLEWNSLGPWEDAFATFCGALAANSTLRQLDLRNNQISHKGAEELALALRSNASLQQLEQAMDRNQDRQATVRESQARAHILSKEVQHLREEKSKQFLDLMETIDRQRQEMAKSSTASAARVGRLQEALSERHSVISALKAKLQMAEAALALSEQKARDLGERLATAEQEQRSLAQRQAKEHRLELQEAADRESKLLRDLSAAQEKNLRLRNQVDELERKVKSQQEQLFLSRQELTTTSAELKMRAAQAEERLELEKTRSRQNLEDAEHLRFKEVEHMTRHLEESEKAMQDRVQRLEAVRLSLEEELSQVKAAALSERGRAEEELLKAKSQVRLEEQQRLAHLEEKLRLLAQARDEAQSACLQQKQMVADAQARASQLGLQVEGLRRRLEELQQELSNKDQEKAAEVTRVRLELQEQNGRLQAELTAQEALKEKAAALERQLKVIASDHREALLDRESENASLREKLRLKEAEIARIREEEAQRASFLQNAVLAYVQGSPLRTLSPPK", "length": 627, "header": "tr|A0A287A9P1-1|A0A287A9P1_PIG Computationally mapped isoform of Leucine rich repeat containing 45 OS=Sus scrofa OX=9823 GN=LRRC45 PE=4 SV=1 CANONICAL=A0A286ZKH0-1" }, "locus": { "chromosome": "12", "start_pos": 991079, "end_pos": 985072, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044454.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044454.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040599.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040599.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKH0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K878-1", "protein_name": "Leucine rich repeat containing 45", "gene_name": "Lrrc45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPSAMLPGSCSSYPLSGASHSSWILRREEPRSATPATRGYVARAGWGPQGRSRGHACEVLSAFGDMEEFRRSYNRLCKESGAEPQEAVLQQLHQLSRGGLDLTTQSLTVDTCRALGKLLHKETLLKELVLSDCMLSEEGSTLLLQGLCANTSVQLLDLKGNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEEAFATFCGGLAANGTLRQLDLRNNQISHKGAEELALALKGNATLQQLDLRWNNIGLLGGRALVNCLPSNRTLWKLDLAGNNIPGDILRAVEQAMDHNQDRITAFRENQTRTKILSKEVQHLQEEKSKQFLDLMETIDKQREEMARDSRASAVRVGQLQEALNERQSIINALKAKLQMTEAALALSEQKAQDLGELLAAAEQERQSLSQRQEKERKLEQQEAADRESKLLRDLSAANEKNLLLRSQVDELERKVKSQQEQLFLTRQELTNTSAELKIRAIQAEEHLDMEKRRAKQNMEDLEKLHCKEVDHMTRHLEESERAMQERVQRLEALRLSLEEELSRMKAAVLSERSQAEEELIKAKNQARLEEQHRLAHLEEKIRLLAQARDEAQGTCMQQKQMVAQSQARASQLNLQMEGQQRRLEELQQELSNKDQEKVAEVARVRVELQEQMGRMQADLVAQEVLREKVAALERQLKVVGSEHREALLDRESENASLREKLRLKEAEISRIRDEEAQRASFLQNAVLAYVQGSPLRALSPPK", "length": 735 }, "evidence": [ { "id": "A0A286ZKH0", "url": "https://omabrowser.org/oma/group/A0A286ZKH0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1B8B1-1", "protein_name": "Leucine rich repeat containing 45", "gene_name": "LRRC45", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEEFRRAYSRLCKESGTEPQETVLQQLHQLPQGRLDLATQSLTVDTCRALGKLLQKESLLTELILSDCMLSEEGATLLLQGLCVNTAVRFLDLKGNNLRAAGAEALAKLLRQNKSIQSLTLEWNNLGTWDEAFATFCGALAANGALRQLDLRNNQINHKGAEELALALKSNASLQQLDLRWNHIGLLGGRALVNCLPSNRTLWKLELAGNNIPGDILRAVEQAMDHNQDRQTVFRESQARAQVLSKEVRHLREEKSKQFLDLMETIDRQREEMARSSKASAARVGQLQEALNERHSIINSLKAKLQMTEAALALSEQKAQDLGELLATTEQEQRSLVQRQAKEHRLEQQEAAERESKLLRDLSAANEKNLLLRNQVDELERKVKSQQEQLFLTKTELTNTTAELKMRAIQAEERLELEKNRSRQSLEDAEHLRFKEVEHMTRHLEDSERAMQERVQRLEAARLSLEEELSRVKAAALTERSQAEEELIKAKNQVRLEEQQHQAHLEEKLRLLAQARDEAQSTCLQQKQTVADAQARASQLGMQVESLRRRLEELQQELSNKDQEKVAEVTRVRLELQEQNGRLQAELTAQEALKEKAAALERQLKVIASDHREALLDRESENASLREKLRLKEAEIARIRDEEAQRASFLQNAVLAYVQGSPLRTLSPQK", "length": 670 }, "evidence": [ { "id": "A0A286ZKH0", "url": "https://omabrowser.org/oma/group/A0A286ZKH0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3GXC7-1", "protein_name": "Leucine-rich repeat-containing protein 45 isoform X1", "gene_name": "Lrrc45", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEELRRSYSLLCEESGAEPQEAVLQQLQQLPRGRLDLATQSLTLDTCRALGKLLHDEKLLKELVLSDCMLSEEGSTLLFQGLCANTTVQRLDLKGNNLRATGAEALGKLLRQSKSIQSLTLEWNNLGMWEDAFASFCGGLAANSTLRQLDLRNNQISHKGAEELALALKGNTTLRHLDLRWNNIGLLGGRALVNCLPSNRTLRRLDLAGNNIPGDILRAVEQAMDHNQDRLTAFWENQARTNILSKEVQHLQEEKSKQFLDLMETIDKQREEIARNGRASAARVGQLQEALNERQSIINALKAKLQMTEAALALSEQKAQDLGELLTTAEQERQSLSQRQEKERKLEQQEAADRESKLLRDLSAANEKNLLLRSQVEELERKVKSQQEQLFLTRQELTNTSAELKIRAIQAEERLDVEKRRAKQNMEDLEKLHSKEVDHMTRHLEESERAMQERIQRLEALRLSLEEELSRMKAALLSERGQAEEELIKARNQARLEEQHRLAHLEEKIRLLAQARDEAQGTCLQQKQMVAESQARASQLNLQMEGQQRRLEELQQELSNKDQEKVAEVTRVRVELQEQMGRMQADLVAQEVLKEKVAALERQLKVIGNEHREALLDRESENASLREKLRLKEAEISRIRDEEAQRASFLQNAVLAYVQGSPLRALSPPK", "length": 670 }, "evidence": [ { "id": "A0A286ZKH0", "url": "https://omabrowser.org/oma/group/A0A286ZKH0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8CIM1-1", "protein_name": "Leucine-rich repeat-containing protein 45", "gene_name": "Lrrc45", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEEFRRSYNRLCEESGAEPQEAVLQQLHQLPKGGLDLTTQSLTVETCRALGKLLHKETLLKELVLSDCMLSEEGSTLLFQGLCANTSVQHLDLKGNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAFATFCGGLAANSALRQLDLRNNQISHKGAEELALALKGNTTLQQLDLRWNNIGLLGGRALVNCLPSNRTLWKLDLAGNNIPGDILRAVEQAMDHNQDRLTAFRENQARTKILSKEVQHLQEEKSKQFLDLMETIDKQREEMARDSRASAVRVGQLQEALNERQSIINALKAKLQMTEAALALSEQKVRDLGELLVAGDQERQSLSQRHEKERKLERQEAADRESKLLRDLSAASEKNLLLRSQVDELERKARSQQEQLFLTKQELTNTSAELKIRAIQAEERLDVEKRRAKQNMEDLEKLHSKEVDHMTRHLEESERAMQERVQRLEALRLSLEEELSRMKAAVLSERGQAEEELIKARNQARLEEQHRLAHLEEKIRLLAQARDEAQGTCVQQKQMVAESQARVSQLNLQMEGQQRRLEELQQELINKDQEKVAEVARVRVELQEQMGRMQADLVAQEALREKVAALERQMKVIGSEHREALLDRESENASLREKLRLKEAEISRIRDEEAQRASFLQNAVLAYVQGSPLRALSPPK", "length": 670 }, "evidence": [ { "id": "A0A286ZKH0", "url": "https://omabrowser.org/oma/group/A0A286ZKH0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96CN5-1", "protein_name": "Leucine-rich repeat-containing protein 45", "gene_name": "LRRC45", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEFRRSYSRLCRESGAEPQEAVLQQLHQLPRGRLDLATQSLTVETCRALGKLLPRETLCTELVLSDCMLSEEGATLLLRGLCANTVLRFLDLKGNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTWDDAFATFCGGLAANGALQRLDLRNNQISHKGAEELALALKGNTTLQQLDLRWNNVGLLGGRALMNCLPSNRTLWRLDLAGNNIPGDVLRAVEQAMGHSQDRLTTFQENQARTHVLSKEVQHLREEKSKQFLDLMETIDKQREEMAKSSRASAARVGQLQEALNERHSIINALKAKLQMTEAALALSEQKAQDLGELLATAEQEQLSLSQRQAKELKLEQQEAAERESKLLRDLSAANEKNLLLQNQVDELERKFRCQQEQLFQTRQEMTSMSAELKMRAIQAEERLDMEKRRCRQSLEDSESLRIKEVEHMTRHLEESEKAMQERVQRLEAARLSLEEELSRVKAAALSERGQAEEELIKAKSQARLEEQQRLAHLEDKLRLLAQARDEAQGACLQQKQVVAEAQTRVSQLGLQVEGLRRRLEELQQELSLKDQERVAEVSRVRVELQEQNGRLQAELAAQEALREKAAALERQLKVMASDHREALLDRESENASLREKLRLREAEIARIRDEEAQRASFLQNAVLAYVQASPVRTLSPPK", "length": 670 }, "evidence": [ { "id": "A0A286ZKH0", "url": "https://omabrowser.org/oma/group/A0A286ZKH0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKH0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKH0" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKH0" } ], "pmid": "" }, { "name": "ciliary basal body", 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"categories": [ "Protein Classification" ] }, { "id": "PTHR14495:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14495:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15793", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15793", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21669", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21669", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22779", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22779", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKJ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A542", "url": "https://www.uniprot.org/uniprotkb/A0A287A542", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A542-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A542-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LL04", "url": "https://www.uniprot.org/uniprotkb/I3LL04", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LL04-1", "url": "https://www.uniprot.org/uniprotkb/I3LL04-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGRSQVHIFWGAPLGPLEMTVPQEPTSLMSTADPWKEIQLLYNQHPLHLKDEKSRHKTLEDYQALEAVGSPDLPHGHFPANSVNSSVHVKDDFIHGISETKTLKSQKSHPLVSSDGTKSNEQICEFKGRVQHLAEEKKYQNLFSENKIADEQHQDRSNICDHNFPKNSFQLDPKCAAVLDVVCRPEQMDTGPGAIKTKCVPTEHREIQNQCLEFFSSNSVDKPKPEEAVGKVSGLKISTNTEFLSIMTSSQLAFLAQRKYKGQNSINKTVNMETEPEASHGEIRITKDNLNQPNDDTAEGVYEDGQNQAHSLELVSPVCPETRSHHIHLNSDKGLEENIGSPELFSVEDKLLPNEICIEPCSSGILCSQLNTFHKRSSKRSWTSEKKSGPPKALSEAPHVAKKIKLISNGRDHIVAVGQRNASEFKGIKKTSLIKNCDSESQKYHCLVMVLSPCHMKEITIKSGPNSGSKVPLATIVVIDQSEIKKKVFLWRTAAFWALTVFLGDIILLTDVTIHEDHWVGETVLQSTFTSQLLNLGSYSSVRPEEYSGVVSDVVLQDLLAYVSSKHSYLRDLPQRQPQKMSSIEFVELEQLQPDILVHAVLRVVDITILTEALYSYRGQKQRKVMLTVEQTQGQHYVLVLWGPGAAWYPQLQRKKDSIWEFKYLFVQRNCILENLELHTTPWSSCECLFDDDTRAIEFKAKFQKNTPSFVKISDLATHLEDKHSGVILIKAQILELVFPISATQKITLSAHSSLESIFSALPKVIYTGCAKCGLELETDENKIYKQCFSCLPFTVKKIYYRPALMTIVDGLSKVCIHIGSKLIEKILLNIPPDWLNRVIAPPSDVTYGMVAADLLHSLLAVSGALRVLKVQSLFVLDENSYPLQQDFSLLDFYPNDVKHKSHAPL", "length": 907, "header": "tr|A0A286ZKJ4-1|A0A286ZKJ4_PIG Isoform 1 of Shieldin complex subunit 2 OS=Sus scrofa OX=9823 GN=SHLD2 PE=4 SV=2 CANONICAL=A0A286ZKJ4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKJ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4/entry#A0A286ZKJ4-1", "sequence": { "sequence": 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subunit 2 OS=Sus scrofa OX=9823 GN=SHLD2 PE=4 SV=2 CANONICAL=A0A286ZKJ4-1" }, "locus": { "chromosome": "14", "start_pos": 88112018, "end_pos": 88061395, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051318.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051318.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032099.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032099.2" } ] } }, { "isoform_ac": "A0A287A542-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4/entry#A0A287A542-1", "sequence": { "sequence": "MSGRSQVHIFWGAPLGPLEMTVPQEPTSLMSTADPWKEIQLLYNQHPLHLKDEKSRHKTLEDYQALEAVGSPDLPHGHFPANSVNSSVHVKDDFIHGISETKTLKSQKSHPLVSSDGTKSNEQICEFKGRVQHLAEEKKYQNLFSENKIADEQHQDRSNICDHNFPKNSFQLDPKCAAVLDVVCRPEQMDTGPGAIKTKCVPTEHREIQNQCLEFFSSNSVDKPKPEEAVGKVSGLKISTNTEFLSIMTSSQLAFLAQRKYKGQNSINKTVNMETEPEASHGEIRITKDNLNQPNDDTAEGVYEDGQNQAHSLELVSPVCPETRSHHIHLNSDKGLEENIGSPELFSVEDKLLPNEICIEPCSSGILCSQLNTFHKRSSKRSWTSEKKSGPPKALSEAPHVAKKIKLISNGRDHIVAVGQRNASEFKGIKKTSLIKNCDSESQKYHCLVMVLSPCHMKEITIKSGPNSGSKVPLATIVVIDQSEIKKKVFLWRTAAFWALTVFLGDIILLTDVTIHEDHWVGETVLQSTFTSQLLNLGSYSSVRPEEYSGVVSDVVLQDLLAYVSSKHSYLRDLPQRQPQKMSSIEFVELEQLQPDILVHAVLRVVDITILTEALYSYRGQKQRKVMLTVEQTQGQHYVLVLWGPGAAWYPQLQRKKGVILIKAQILELVFPISATQKITLSAHSSLESIFSALPKVIYTGCAKCGLELETDENKIYKQCFSCLPFTVKKIYYRPALMTIVDGLSKVCIHIGSKLIEKILLNIPPDWLNRVIGEELSLNSSCPFSWCSRENKHGRGLGENLRLTRPTA", "length": 808, "header": "tr|A0A287A542-1|A0A287A542_PIG Computationally mapped isoform of Shieldin complex subunit 2 OS=Sus scrofa OX=9823 GN=SHLD2 PE=4 SV=1 CANONICAL=A0A286ZKJ4-1" }, "locus": { "chromosome": "14", "start_pos": 88120889, "end_pos": 88061395, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040555.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040555.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038985.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038985.1" } ] } }, { "isoform_ac": "I3LL04-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4/entry#I3LL04-1", "sequence": { "sequence": "MSGRSQVHIFWGAPLGPLEMTVPQEPTSLMSTADPWKEIQLLYNQHPLHLKDEKSRHKTLEDYQALEAVGSPDLPHGHFPANSVNSSVHVKDDFIHGISETKTLKSQKSHPLVSSDGTKSNEQICEFKGRVQHLAEEKKYQNLFSENKIADEQHQDRSNICDHNFPKNSFQLDPKCAAVLDVVCRPEQMDTGPGAIKTKCVPTEHREIQNQCLEFFSSNSVDKPKPEEAVGKVSGLKISTNTEFLSIMTSSQLAFLAQRKYKGQNSINKTVNMETEPEASHGEIRITKDNLNQPNDDTAEGVYEDGQNQAHSLELVSPVCPETRSHHIHLNSDKGLEENIGSPELFSVEDKLLPNEICIEPCSSGILCSQLNTFHKRSSKRSWTSEKKSGPPKALSEAPHVAKKIKLISNGRDHIVAVGQRNASEFKGIKKTSLIKNCDSESQKYHCLVMVLSPCHMKEITIKSGPNSGSKVPLATIVVIDQSEIKKKVFLWRTAAFWALTVFLGDIILLTDSGVVSDVVLQDLLAYVSSKHSYLRDLPQRQPQKMSSIEFVELEQLQPDILVHAVLRVVDITILTEALYSYRGQKQRKVMLTVEQTQGQHYVLVLWGPGAAWYPQLQRKKDSIWEFKYLFVQRNCILENLELHTTPWSSCECLFDDDTRAIEFKAKFQKNTPSFVKISDLATHLEDKHSGVILIKAQILELVFPISATQKITLSAHSSLESIFSALPKVIYTGCAKCGLELETDENKIYKQCFSCLPFTVKKIYYRPALMTIVDGLSKVCIHIGSKLIEKILLNIPPDWLNRVIAPPSDVTYGMVAADLLHSLLAVSGALRVLKVQSLFVLDENSYPLQQDFSLLDFYPNDVKHKSHAPL", "length": 871, "header": "tr|I3LL04-1|A0A286ZKJ4_PIG Computationally mapped isoform of Shieldin complex subunit 2 OS=Sus scrofa OX=9823 GN=SHLD2 PE=4 SV=2 CANONICAL=A0A286ZKJ4-1" }, "locus": { "chromosome": "14", "start_pos": 88112018, "end_pos": 88061395, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022588.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022588.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024770.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024770.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LL04", "url": "https://www.uniprot.org/uniprotkb/I3LL04" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625894", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625894", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "negative regulation of double-strand break repair via homologous recombination", "id": "GO:2000042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000042", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4" } ], "pmid": "" }, { "name": "positive regulation of double-strand break repair via nonhomologous end joining", "id": "GO:2001034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001034", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4" } ], "pmid": "" }, { "name": "positive regulation of isotype switching", "id": "GO:0045830", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045830", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4" } ], "pmid": "" }, { "name": "regulation of double-strand break repair via homologous recombination", "id": "GO:0010569", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010569", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4" } ], "pmid": "" }, { "name": "site of double-strand break", "id": "GO:0035861", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035861", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 268, "end_pos": 270, "annotation": "n_glycosylation_sequon" }, { "start_pos": 422, "end_pos": 424, "annotation": "n_glycosylation_sequon" }, { "start_pos": 85, "end_pos": 87, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], 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"XP_020928733", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928733" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ARHGAP22", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1", "locus": { "chromosome": "14", "start_pos": 89113768, "end_pos": 89331274, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010381", "url": "https://www.ensembl.org/id/ENSSSCG00000010381" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010381", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010381", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04390", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04390", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13378", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13378", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "102159729", "url": "https://www.ncbi.nlm.nih.gov/gene/102159729", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051025", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051025", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102159729", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102159729", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WKYSFKQ", "url": "https://omabrowser.org/oma/group/WKYSFKQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BGM7", "url": "https://www.orthodb.org/?gene=A0A287BGM7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15228", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15228", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15228:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15228:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00620", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00620", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8980692", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020928733", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020928733", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKK1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGM7", "url": "https://www.uniprot.org/uniprotkb/A0A287BGM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VFD3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFD3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VFD3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFD3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0UNS3", "url": "https://www.uniprot.org/uniprotkb/A0A8D0UNS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0UNS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0UNS3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQV0", "url": "https://www.uniprot.org/uniprotkb/I3LQV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQV0-1", "url": "https://www.uniprot.org/uniprotkb/I3LQV0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLSPKIRQARRARSKSLVMGEQSRSPGRPPCPRRLGPVLKAGWLKKQRSIMKNWQQRWFVLRGDQLFYYKDKDETKPQGFISLQGTQVTELLPGPEDPGKHLFEISPGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGTARSSHAHPLEPLPPGIFGQRLEDTVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSSLPLVNYNLLRYICKFLDEVQSHSDVNKMSVQNLATVFGPNILRPPIEDPVTIMEGTSLVQHLMTVLIRKHSQLFTSRTTEGPASPRRGPPCTVGWGSEEVPKDSQVEPGSPSAPGLPSHRTASLDGAAVAALSRTSPTGLGSRCSPAATSPGKKVQTLPNWRSSFRQSGSRSGSPKVGSSSLEVPIISGGNWLMNGLSSLRGHRRALSGDRLKDSGSEQRLSTYDNVPPPSLFPSTSSVASMPWSEASARASVSSCTACRASDSSACSSLHTEGALEPSPVPSSSEGHRSPDLDHGLDGVGSCISSSEPSDPGSPAQDRARRSEALQGLVTELRAELCRQRIEYETSVKRLEEGSADLRKRMSRLEEELDQEKKKYTMLEIKLRNSERAREDAEKRNQLLQKEMEEFFSTLGSLTVGAKGARVPK", "length": 716, "header": "tr|A0A286ZKK1-1|A0A286ZKK1_PIG Isoform 1 of Rho GTPase activating protein 22 OS=Sus scrofa OX=9823 GN=ARHGAP22 PE=4 SV=1 CANONICAL=A0A286ZKK1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKK1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1/entry#A0A286ZKK1-1", "sequence": { "sequence": "MLSPKIRQARRARSKSLVMGEQSRSPGRPPCPRRLGPVLKAGWLKKQRSIMKNWQQRWFVLRGDQLFYYKDKDETKPQGFISLQGTQVTELLPGPEDPGKHLFEISPGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGTARSSHAHPLEPLPPGIFGQRLEDTVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSSLPLVNYNLLRYICKFLDEVQSHSDVNKMSVQNLATVFGPNILRPPIEDPVTIMEGTSLVQHLMTVLIRKHSQLFTSRTTEGPASPRRGPPCTVGWGSEEVPKDSQVEPGSPSAPGLPSHRTASLDGAAVAALSRTSPTGLGSRCSPAATSPGKKVQTLPNWRSSFRQSGSRSGSPKVGSSSLEVPIISGGNWLMNGLSSLRGHRRALSGDRLKDSGSEQRLSTYDNVPPPSLFPSTSSVASMPWSEASARASVSSCTACRASDSSACSSLHTEGALEPSPVPSSSEGHRSPDLDHGLDGVGSCISSSEPSDPGSPAQDRARRSEALQGLVTELRAELCRQRIEYETSVKRLEEGSADLRKRMSRLEEELDQEKKKYTMLEIKLRNSERAREDAEKRNQLLQKEMEEFFSTLGSLTVGAKGARVPK", "length": 716, "header": "tr|A0A286ZKK1-1|A0A286ZKK1_PIG Isoform 1 of Rho GTPase activating protein 22 OS=Sus scrofa OX=9823 GN=ARHGAP22 PE=4 SV=1 CANONICAL=A0A286ZKK1-1" }, "locus": { "chromosome": "14", "start_pos": 89282720, "end_pos": 89114072, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045570.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045570.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032104.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032104.1" } ] } }, { "isoform_ac": "A0A287BGM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1/entry#A0A287BGM7-1", "sequence": { "sequence": "MLPTASSKRRTFAARYFARSKSLVMGEQSRSPGRPPCPRRLGPVLKAGWLKKQRSIMKNWQQRWFVLRGDQLFYYKDKDETKPQGFISLQGTQVTELLPGPEDPGKHLFEISPGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGTARSSHAHPLEPLPPGIFGQRLEDTVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSSLPLVNYNLLRYICKFLDEVQSHSDVNKMSVQNLATVFGPNILRPPIEDPVTIMEGTSLVQHLMTVLIRKHSQLFTSRTTEGPASPRRGPPCTVGWGSEEVPKDSQVEPGSPSAPGLPSHRTASLDGAAVAALSRTSPTGLGSRCSPAATSPGKKVQTLPNWRSSFRQSGSRSGSPKVGSSSLEVPIISGGNWLMNGLSSLRGHRRALSGDRLKDSGSEQRLSTYDNVPPPSLFPSTSSVASMPWSEASARASVSSCTACRASDSSACSSLHTEGALEPSPVPSSSEGHRSPDLDHGLDGVGSCISSSEPSDPGSPAQDRARRSEALQGLVTELRAELCRQRIEYETSVKRLEEGSADLRKRMSRLEEELDQEKKKYTMLEIKLRNSERAREDAEKRNQLLQKEMEEFFSTLGSLTVGAKGARVPK", "length": 722, "header": "tr|A0A287BGM7-1|A0A287BGM7_PIG Computationally mapped isoform of Rho GTPase activating protein 22 OS=Sus scrofa OX=9823 GN=ARHGAP22 PE=4 SV=1 CANONICAL=A0A286ZKK1-1" }, "locus": { "chromosome": "14", "start_pos": 89318794, "end_pos": 89114072, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044031.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044031.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055500.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055500.1" } ] } }, { "isoform_ac": "A0A4X1VFD3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1/entry#A0A4X1VFD3-1", "sequence": { "sequence": "MPFCPARYLKKSRRLPRGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGIFGQRLEDTVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSSLPLVNYNLLRYICKFLDEVQSHSDVNKMSVQNLATVFGPNILRPPIEDPVTIMEGTSLVQHLMTVLIRKHSQLFTSRTTEGPASPRRGPPCTVGWGSEEVPKDSQVEPGSPSAPGLPSHRTASLDGAAVAALSRTSPTGLGSRCSPAATSPGKKVQTLPNWRSSFRQSGSRSGSPKVGSSSLEVPIISGGNWLMNGLSSLRGHRRALSGDRLKDSGSEQRLSTYDNVPPPSLFPSTSSVASMPWSEASARASVSSCTACRASDSSACSSLHTEGALEPSPVPSSSEGHRSPDLDHGLDGVGSCISSSEPSDPGSPAQDRARRSEALQGLVTELRAELCRQRIEYETSVKRLEEGSADLRKRMSRLEEELDQEKKKYTMLEIKLRNSERAREDAEKRNQLLQKEMEEFFSTLGSLTVGAKGARVPK", "length": 610, "header": "tr|A0A4X1VFD3-1|A0A286ZKK1_PIG Computationally mapped isoform of Rho GTPase activating protein 22 OS=Sus scrofa OX=9823 GN=ARHGAP22 PE=4 SV=1 CANONICAL=A0A286ZKK1-1" }, "locus": { "chromosome": "14", "start_pos": 89160991, "end_pos": 89114072, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073453.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073453.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066540.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066540.1" } ] } }, { "isoform_ac": "A0A8D0UNS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1/entry#A0A8D0UNS3-1", "sequence": { "sequence": "MLSPKIRQARRARSKSLVMGEQSRSPGRPPCPRRLGPVLKAGWLKKQRSIMKNWQQRWFVLRGDQLFYYKDKDETKPQGFISLQGTQVTELLPGPEDPGKHLFEISPGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGIFGQRLEDTVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSSLPLVNYNLLRYICKFLDEVQSHSDVNKMSVQNLATVFGPNILRPPIEDPVTIMEGTSLVQHLMTVLIRKHSQLFTSRTTEGPASPRRGPPCTVGWGSEEVPKDSQVEPGSPSAPGLPSHRTASLDGAAVAALSRTSPTGLGSRCSPAATSPGKKVQTLPNWRSSFRQSGSRSGSPKVGSSSLEVPIISGGNWLMNGLSSLRGHRRALSGDRLKDSGSEQRLSTYDNVPPPSLFPSTSSVASMPWSEASARASVSSCTACRASDSSACSSLHTEGALEPSPVPSSSEGHRSPDLDHGLDGVGSCISSSEPSDPGSPAQDRARRSEALQGLVTELRAELCRQRIEYETSVKRLEEGSADLRKRMSRLEEELDQEKKKYTMLEIKLRNSERAREDAEKRNQLLQKEMEEFFSTLGSLTVGAKVVPGNPELAEESSPNPAAQAPCGIWMLF", "length": 722, "header": "tr|A0A8D0UNS3-1|A0A286ZKK1_PIG Computationally mapped isoform of Rho GTPase activating protein 22 OS=Sus scrofa OX=9823 GN=ARHGAP22 PE=4 SV=1 CANONICAL=A0A286ZKK1-1" }, "locus": { "chromosome": "14", "start_pos": 89282720, "end_pos": 89113902, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088516.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088516.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072146.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072146.1" } ] } }, { "isoform_ac": "I3LQV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1/entry#I3LQV0-1", "sequence": { "sequence": "MGLCCCKDWRGHLRAPKGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGIFGQRLEDTVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDRFLDEVQSHSDVNKMSVQNLATVFGPNILRPPIEDPVTIMEGTSLVQHLMTVLIRKHSQLFTSRTTEGPASPRRGPPCTVGWGSEEVPKDSQVEPGSPSAPGLPSHRTASLDGAAVAALSRTSPTGLGSRCSPAATSPGKKVQTLPNWRSSFRQSGSRSGSPKVGSSSLEVPIISGGNWLMNGLSSLRGHRRALSGDRLKDSGSEQRLSTYDNVPPPSLFPSTSSVASMPWSEASARASVSSCTACRASDSSACSSLHTEGALEPSPVPSSSEGHRSPDLDHGLDGVGSCISSSEPSDPGSPAQDRARRSEALQGLVTELRAELCRQRIEYETSVKRLEEGSADLRKRMSRLEEELDQEKKKYTMLEIKLRNSERAREDAEKRNQLLQKEMEEFFSTLGSLTVGAKGARVPK", "length": 541, "header": "tr|I3LQV0-1|A0A286ZKK1_PIG Computationally mapped isoform of Rho GTPase activating protein 22 OS=Sus scrofa OX=9823 GN=ARHGAP22 PE=4 SV=3 CANONICAL=A0A286ZKK1-1" }, "locus": { "chromosome": "14", "start_pos": 89193052, "end_pos": 89114072, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022910.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022910.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026482.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026482.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFD3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFD3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102159729", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102159729", "resource": "KEGG Pathway" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JTT7-1", "protein_name": "Rho GTPase activating protein 22", "gene_name": "Arhgap22", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSPKIRQARRARSKSLVMGEQSRSPGRPLAPHKLGPVLKAGWLRKQKSIMKNWQQRWFVLRGDQLFYYKDKDEGKPQGFISLQGTQVTELLPDPDDPGKHLFEITPGGAAEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGTSRSSHAHPVEPLSTGIFGQRLEDTVHHERKFGPRLAPLLVEQCVDFIRERGLSEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVIPFARYEDFLSCAQLLTKDEGEGTVELAKQVSNLPQANYNLLRYICRFLDEVQAHSDVNKMSVQNLATVFGPNILRPQVEDPVTIMEGTSLVQHLMTVLIRKHGQLFATPSFEEPASPRGTVQGTVEWGSEEVTRDHQGEPGSSGLPTHRTSSLDGPAAAVLSRTSPPRLGSQAGPAATSPGKRMHTLPGWKSSFRQQGSRSESPKGVSSSLEVPIISSGGNWLINGLSSLRSHRRASSGDRLKDTGSAQRLSTYDNVPPSSHLSSTASVASTAWSVASSSREASIGSCTACRASNSSACSSLHTEWALEPSPLPSSSEGHPSPDLGHSLDEACVGSGSSEPNDPGSPSQAHVRRCRALQGQVAELRAELCHQRIEYQRSLKSIEEGNSDLRKQMCRLEEELDQEKKKYAMLEIKLRNSERAREDAERRNQLLQREMEEFFATLGSLTAGTKGARAPE", "length": 716 }, "evidence": [ { "id": "A0A286ZKK1", "url": "https://omabrowser.org/oma/group/A0A286ZKK1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q1MPR6-1", "protein_name": "Rho GTPase activating protein 22", "gene_name": "ARHGAP22", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLPTAPSKRRTLAARYFARSKSLVMGEQSRSPGRPPCPRRLGPVLKAGWLKKQRSIMKGWQQRWFVLRGDQLFYYKDKDETKPQGFISLQGTQVTELLPGPEDPGKHLFEISPGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPFGRGIFGQRLEDTVHHERKYGPRLAPLLVEQCVDFIRERGLSEEGLFRMPGQANLVRDLQDSFDCGEKPRFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLNCAQLLTKDEGEGTLELAKQVSSLPLVNYNLLRYICKFLDEVQSHSDVNKMSVQNLATVFGPNILRPQREDPVTIMEGTSLVQHLMTILIRKHSQLFTSRTTEGPASPRGGPPCTVGWGSEEVTRDDQAEPGSPSAPCLPSHRTSSLDGAAVAALSRTSPTGLGSRCSPAATSPGKKVQTLPNWRSSFRQSGSRSGSPKVGTSSLEVPIISSGGNWLMNGLSSLRGHRRASSGDRLKDSGSEQRLSTYDNVPPQSCFPSTPSVASLPWSGASSCEASAQGSVSSCTACRASDSSTCSSLHIEGALEPSPVLSSSEERRSLDLDHGLDGVGACISSSEPSDPGSPAQDHARRTEVLQGLVTELRAELCRQRTEYETNVKRLEEGSADLRKRMSRLEEELDQEKKKYTMLEIKLRNSERAREDAEKRNQLLQREMEEFFSTLGSLTVGAKGARALK", "length": 712 }, "evidence": [ { "id": "A0A286ZKK1", "url": "https://omabrowser.org/oma/group/A0A286ZKK1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q7Z5H3-1", "protein_name": "Rho GTPase-activating protein 22", "gene_name": "ARHGAP22", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLSPKIRQARRARSKSLVMGEQSRSPGRMPCPHRLGPVLKAGWLKKQRSIMKNWQQRWFVLRGDQLFYYKDKDEIKPQGFISLQGTQVTELPPGPEDPGKHLFEISPGGAGEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGGGIFGQRLEETVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAKQVSNLPQANYNLLRYICKFLDEVQAYSNVNKMSVQNLATVFGPNILRPQVEDPVTIMEGTSLVQHLMTVLIRKHSQLFTAPVPEGPTSPRGGLQCAVGWGSEEVTRDSQGEPGGPGLPAHRTSSLDGAAVAVLSRTAPTGPGSRCSPGKKVQTLPSWKSSFRQPRSLSGSPKGGGSSLEVPIISSGGNWLMNGLSSLRGHRRASSGDRLKDSGSVQRLSTYDNVPAPGLVPGIPSVASMAWSGASSSESSVGGSLSSCTACRASDSSARSSLHTDWALEPSPLPSSSEDPKSLDLDHSMDEAGAGASNSEPSEPDSPTREHARRSEALQGLVTELRAELCRQRTEYERSVKRIEEGSADLRKRMSRLEEELDQEKKKYIMLEIKLRNSERAREDAERRNQLLQREMEEFFSTLGSLTVGAKGARAPK", "length": 698 }, "evidence": [ { "id": "A0A286ZKK1", "url": "https://omabrowser.org/oma/group/A0A286ZKK1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BL80-1", "protein_name": "Rho GTPase-activating protein 22", "gene_name": "Arhgap22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPTASSKRRTFAARYFTRSKSLVMGEQSRSPGRPLVPHKLGPVLKAGWLRKQRSIMKNWQQRWFVLRGDQLFYYKDKDESKPQGFISLQGTQVTELLPDPEDPGKHLFEITPGGATEREKVPANPEALLLMASSQRDMEDWVQAIRRVIWAPLGRGIFGQRLEDTVHHERKFGPRLAPLLVEQCVDFIRERGLSEEGLFRMPGQANLVRDLQDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVIPFARYEDFLSCAQLLTKDEGEGTVELAKQVSNLPQANYNLLRYICKFLDEVQAHSDVNKMSVQNLATVFGPNILRPQIEDPVTIMEGTSLVQHLMTVLIRKHGQLFAATSLEEPASPHGTVEWGSEEVTRDHRGEPGSPGLPTHRTSSLDGPAAAVLSRTSPPRLGSQTGPAATSPGKKMHTLPVWKSSFRQQGSRSESPKGVNSSLEVPIISSGGNWLINGLSSLRSHRRASSGDRLKDTGSAQRLSTYDNVPPSSQFSSTASVASTSWSVASSSREASVSSCTACRASNSSACSSLHTEWALEPSPLPSSSEGHQSPDLGHSLDEPCVGSGSSEPNDPGSPTQAHVRRCRALQGQVAELRAELCQQRTEYKRSLKSIEEGSADLRKQMSRLEEELDQERKKYAMLEIKLRNSERAREDAERRNQLLQREMEEFFSTLGSLTTGTKGSRAPE", "length": 702 }, "evidence": [ { "id": "A0A286ZKK1", "url": "https://omabrowser.org/oma/group/A0A286ZKK1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" }, { "name": "regulation of small GTPase mediated signal transduction", "id": "GO:0051056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051056", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" }, { "name": "negative regulation of small GTPase mediated signal transduction", "id": "GO:0051058", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051058", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" }, { "name": "regulation of postsynapse organization", "id": "GO:0099175", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099175", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKK1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZKK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 37, "end_pos": 145, "start_aa": "Pro", "end_aa": "Trp", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZKK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKK1" }, { "id": "PS50238", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50238" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rho-GAP", "eco_id": "ECO_0000259", "start_pos": 171, "end_pos": 365, "start_aa": "Gln", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZKL4-1", "uniprot_ac": "A0A286ZKL4", "uniprot_id": "A0A286ZKL4_PIG", "mass": { "chemical_mass": 18205.0, "monoisotopic_mass": 18205.0 }, "refseq": { "ac": "XP_013851985", "name": "sterile alpha motif domain-containing protein 12 isoform X5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851985" }, "gene_names": [ { "name": "SAMD12", "type": "recommended", "evidence": [ { "id": "A0A286ZKL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4" } ] }, { "name": "SAMD12", "type": "synonym", "evidence": [ { "id": "XP_013851985", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851985" } ] } ], "protein_names": [ { "name": "Sterile alpha motif domain containing 12", "type": "synonym", "evidence": [ { "id": "A0A286ZKL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4/entry#names_and_taxonomy" } ] }, { "name": "sterile alpha motif domain-containing protein 12 isoform X5", "type": "synonym", "evidence": [ { "id": "XP_013851985", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851985" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKL4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SAMD12", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4", "locus": { "chromosome": "4", "start_pos": 20570768, "end_pos": 20143883, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036553", "url": "https://www.ensembl.org/id/ENSSSCG00000036553" } ] } } ], "crossref": [ { "id": "ENSSSCG00000036553", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036553", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09510", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09510", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100738445", "url": "https://www.ncbi.nlm.nih.gov/gene/100738445", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001660", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001660", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039144", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039144", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052268", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052268", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738445", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738445", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RQRVPHK", "url": "https://omabrowser.org/oma/group/RQRVPHK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZKL4", "url": "https://www.orthodb.org/?gene=A0A286ZKL4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR20843", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20843", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20843:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20843:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07647", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07647", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013851985", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851985", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKL4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKL4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVEALHCGLNPRGIDHPACAEGIKLQIEGEGIESQSIKNKNFQKVLDQKGTPKRLQAEAETAKSATVKLSKPVALWTQQDVCKWLKKHCPNQYQIYSESFKQHDITGRALLRLTDKKLERMGIAQENLRQHILQQVLQLKVREEVRNLQLLTQASTEGSP", "length": 161, "header": "tr|A0A286ZKL4-1|A0A286ZKL4_PIG Isoform 1 of Sterile alpha motif domain containing 12 OS=Sus scrofa OX=9823 GN=SAMD12 PE=4 SV=3 CANONICAL=A0A286ZKL4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKL4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4/entry#A0A286ZKL4-1", "sequence": { "sequence": "MAVEALHCGLNPRGIDHPACAEGIKLQIEGEGIESQSIKNKNFQKVLDQKGTPKRLQAEAETAKSATVKLSKPVALWTQQDVCKWLKKHCPNQYQIYSESFKQHDITGRALLRLTDKKLERMGIAQENLRQHILQQVLQLKVREEVRNLQLLTQASTEGSP", "length": 161, "header": "tr|A0A286ZKL4-1|A0A286ZKL4_PIG Isoform 1 of Sterile alpha motif domain containing 12 OS=Sus scrofa OX=9823 GN=SAMD12 PE=4 SV=3 CANONICAL=A0A286ZKL4-1" }, "locus": { "chromosome": "4", "start_pos": 20562346, "end_pos": 20143993, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048687.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048687.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032117.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032117.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKL4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738445", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738445", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y2J3-1", "protein_name": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZKN5-1", "uniprot_ac": "A0A286ZKN5", "uniprot_id": "A0A286ZKN5_PIG", "mass": { "chemical_mass": 24215.0, "monoisotopic_mass": 24215.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100623393", "type": "recommended", "evidence": [ { "id": "A0A286ZKN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKN5" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A286ZKN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKN5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin-associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. 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"https://bgee.org/?page=gene&gene_id=ENSSSCG00000046681", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR002494", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002494", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23262", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23262", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23262:SF50", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23262:SF50", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13885", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13885", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZKN5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKN5", 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"MATSTLSPCSSDLSYGSHVCLPGSSHPCTSSSWQWDDCPESCCEPPCCAPSGCTPAPRLALVCTPASCEPSPCLSGCTSSCTSSPCQPACCVPVCCRPVCCRPVCCTPVCCTPVCCTPACCVPICCRPVCCRPVSCTPVCCTPVCCTPVCCEASPCSASSCCQPCPCPSSCCRPSSSVSLLCRPVCRPTCCVPVSSCGAPASCCQPSCCRPASCVSLLCRPACSRPACCVPASACESCC", "length": 239, "header": "tr|A0A286ZKN5-1|A0A286ZKN5_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN=LOC100623393 PE=4 SV=2 CANONICAL=A0A286ZKN5-1" }, "locus": { "chromosome": "13", "start_pos": 207368634, "end_pos": 207367828, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066045.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066045.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032029.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032029.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", 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dipeptide repeats protein OS=Sus scrofa OX=9823 GN=RERE PE=4 SV=1 CANONICAL=A0A286ZKS0-1" }, "locus": { "chromosome": "6", "start_pos": 69211169, "end_pos": 69046506, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104645.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104645.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076112.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076112.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 144, "start_aa": "Thr", "end_pos": 144, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr144", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], 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"PTHR48097", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48097", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48097:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48097:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01212", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01212", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZKS7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKS7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLSSLSRAAARRHWALWARGSGSLAGVPTHVVDLRSDTVTQPGPAMRRAMAEAVVGDDDYGEDPTVRELQATAAELLGVERTLFVPTNTMANLISVMCHCRRRGSQLLLGQECHVHVYEQGGVAQIAGVHSHPLPDLPHGTLDLAELERLITRGLGSPYHPVCELICLENTHSSSGGRVLPIEYLRQVHLLARTHGVRVHLDGARLMNAAVALRVPPACIAQHCDSVSLCFSKGLGAPVGALVGGPKHFIEEAWRLRKALGGGMRQAGVLAAAALVGLADAEEVLLRDHQNAQKFAKGLQELASPVCSVDLSAVETNVVMVRVDGLPPKELCQRLQAVSADEVVQTGRAVRVLLFPWTEQSVRAVWHRDVSAQDTELALGKWAFVLRALRTG", "length": 392, "header": "tr|A0A286ZKS7-1|A0A286ZKS7_PIG Isoform 1 of Threonine aldolase 1 OS=Sus scrofa OX=9823 GN=THA1 PE=3 SV=1 CANONICAL=A0A286ZKS7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKS7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7/entry#A0A286ZKS7-1", "sequence": { "sequence": "MLSSLSRAAARRHWALWARGSGSLAGVPTHVVDLRSDTVTQPGPAMRRAMAEAVVGDDDYGEDPTVRELQATAAELLGVERTLFVPTNTMANLISVMCHCRRRGSQLLLGQECHVHVYEQGGVAQIAGVHSHPLPDLPHGTLDLAELERLITRGLGSPYHPVCELICLENTHSSSGGRVLPIEYLRQVHLLARTHGVRVHLDGARLMNAAVALRVPPACIAQHCDSVSLCFSKGLGAPVGALVGGPKHFIEEAWRLRKALGGGMRQAGVLAAAALVGLADAEEVLLRDHQNAQKFAKGLQELASPVCSVDLSAVETNVVMVRVDGLPPKELCQRLQAVSADEVVQTGRAVRVLLFPWTEQSVRAVWHRDVSAQDTELALGKWAFVLRALRTG", "length": 392, "header": "tr|A0A286ZKS7-1|A0A286ZKS7_PIG Isoform 1 of Threonine aldolase 1 OS=Sus scrofa OX=9823 GN=THA1 PE=3 SV=1 CANONICAL=A0A286ZKS7-1" }, "locus": { "chromosome": "12", "start_pos": 3733828, "end_pos": 3728838, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051048.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051048.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032074.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032074.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKS7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6GL69-1", "protein_name": "Threonine aldolase 1", "gene_name": "Tha1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRSLARAAVPGLRVPWAQWSRNWAGVPAHVVDLRSDTVTRPGPAMRRAMAEAVVGDDDYGEDPTVHELQEKAAKVLGVERTLFVPTNTMANLISVMGHCRRRGSQVLLGQECHLHVYEQGGVAQIAGVHSHPLPDLPHGTLDLNELERALARGFGSSYHPVCELVCLENTHSSAGGRVLSIDYLRQVRLLAHAHGARVHLDGARLMNAAVALRVPPARLVEHCDSVSFCFSKGLGAPVGALVGGPKDFIEEAWRLRKALGGGMRQAGVLAAAALVGLAEAEEVLLRDHENAQRFAKGLQDLASPICSVDPATVETNMVLVRVAGLPPSELCQHLQAVSAEEVAQTGHAVRVLLFPWTEQSVRAVWHRDVSAQDMELALKKWEFVLRQLRP", "length": 391 }, "evidence": [ { "id": "A0A286ZKS7", "url": "https://omabrowser.org/oma/group/A0A286ZKS7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V1AC99-1", "protein_name": "Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein", "gene_name": "LOC101747660", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLAARGAGTALRRALLLGAESRRGGAAMAGDSGPGTGAGSLRGGAALGRPQHVVDLRSDTVTQPGAAMRSAMARAAVGDDDYGEDPTVNELQQLAARILGMEDALFVPTATMANLIAVMCHCQRRGAQLMLGAQAHLHVYEHGGAAQVAGVHSQALPDLPDGTLDLEQLELAIREAHGSRYHPRPELICLENTHSSAGGRALPLTYLQQVRLLAERYGLRVHMDGARLMNAAVAQDVEPARIAQHCDSVSLCFSKGLGAPAGAVLAGRRAFVAEAWRVRKLLGGGMRQAGVLAAAARIGLEQAEETLRRDHDNARRFAQGIKELNSPLCSVSLAAVETNIVMVEVKGLSPAELCTYLQAASEEELAETGHTVSVLLFPWSERTVRAVWHCDVSAHDTELALNKLGFVARKYQEKLAHGQGPSPRSTGEH", "length": 429 }, "evidence": [ { "id": "A0A286ZKS7", "url": "https://omabrowser.org/oma/group/A0A286ZKS7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H3F2-1", "protein_name": "Probable low-specificity L-threonine aldolase 1", "gene_name": "LOC100769555", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLRRLARAAVPGLRVPWARWSRNWAGVPAQVVDLRSDTVTRPGPAMRRAMAEALVGDDDYGEDPTVHELQEKAAKLLGVERTLFVPTNTMANLISVMGHCRRRGSQVLLGQECHLHVYEQGGVAQIAGVHSQPLPDMPHGTLDLNELERALTRGFGSSYHPVCELVCLENTHSSAGGRVLSIDYLRQVHLLAHMHGARVHLDGARLMNAAVALCVPPARLVEHCDSVSFCFSKGLGAPVGALLGGAKDFIEEAWRLRKALGGGMRQAGVLAAAALVGLAEAEEVLPRDHENAQRFAKGLQDLASPICSVDPVTVETNIVLVQVAGLPPAELCQRLQAVSAEEVAQTGCAVSVLLFPWTEHSVRVVWHRDVSAQDTELALRKWEFVLRQLRP", "length": 391 }, "evidence": [ { "id": "A0A286ZKS7", "url": "https://omabrowser.org/oma/group/A0A286ZKS7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8RXU4-1", "protein_name": "Low-specificity L-threonine aldolase 1", "gene_name": "THA1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": 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"MTTHSVVDLRSDTVSQPTDKMRARMATAVVGDDVYGEDPTVNELEARTAAIFGKEAGLFVPSGTMGNLLAIMVHCHRRGTEALVGDLSHIFLYEQGGASHLAGVQLATLKNEQDGTFSLQDLRRRIRHEDCHEPITSLVVVEQTHNICGGKVVPLAFLDELAALVRQPGVGTGNARIALHMDGARVFNAATALGVGVERICRDFDSVSICLSKGLSAPVGSVLVGSKAFISEAHRLRKALGGGMRQVGVLAAAGLVALDEVVPLLSKDHERTNKIANAIYELKSPNITVHVSSVQSNILLVEITQPKLTASEFSTRLSIVDAGEVEAGVKDKNGAGIVVKASARDWAFARLVLYHQVDDEQVDLAIRKLKYVIGQYDKQFPRT", "length": 383 }, "evidence": [ { "id": "A0A286ZKS7", "url": "https://omabrowser.org/oma/group/A0A286ZKS7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "glycine biosynthetic process", "id": "GO:0006545", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006545", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKS7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7" } ], "pmid": "" }, { "name": "L-threonine catabolic process", "id": "GO:0006567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006567", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKS7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKS7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "L-allo-threonine aldolase activity", "id": "GO:0008732", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008732", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKS7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZKS7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 392, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZKS7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZKS7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZKS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKS7" }, { "id": "PF01212", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01212" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Aromatic amino acid beta-eliminating lyase/threonine aldolase", "eco_id": "ECO_0000259", "start_pos": 33, "end_pos": 323, "start_aa": "Asp", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"Protein" ] }, { "id": "A0A287BLQ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLQ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0M5Z6", "url": "https://www.uniprot.org/uniprotkb/A0A8D0M5Z6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0M5Z6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0M5Z6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRTHTALPWRESSPRMIQKLEPQNPSPKALDRKQRLSSAGCVISSGAAAYPLVSSPARLKPRLRPWVWEHRSRMRKVKVGLFAQNPAWPGRRHIRRMAAGLLTTWSQDSVTFEEVTVDFSQEEWALLDPAQKILYRDVMLENFRNLASLGYQLCKHSLITEMEQEEQKPEGRGILQGAGTDWETQLKSKDAILMQSVPGEKTSKSMKMVPAQPHEKPLGFNHCGKFFRKNCHLICTRFCKGEKCYKYKEYGQDFGHFSTLRSHVSTHTGENNLEFSDCGITFNQESSFRKHLTLTGEKSSEYNQHLMSFSLHSSFLAHGQIPTGEKLCEYSDYGKRSSLGVQKKMYAVEECSKCNEHGEVFTGPLSLQICVRPHTGEKPYECGDCGKAFVFQSSLKKHVRSHTGEKPYKCNHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHMRTHTGEKPYECSDCGKAFIDQSSLKKHRRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHIRTHTGEKPYKCIQCGKAFSTSTNLIMHKRIHTG", "length": 572, "header": "tr|A0A286ZKT2-1|A0A286ZKT2_PIG Isoform 1 of Zinc finger protein 177 OS=Sus scrofa OX=9823 GN=ZNF177 PE=3 SV=3 CANONICAL=A0A286ZKT2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKT2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2/entry#A0A286ZKT2-1", "sequence": { "sequence": "MRTHTALPWRESSPRMIQKLEPQNPSPKALDRKQRLSSAGCVISSGAAAYPLVSSPARLKPRLRPWVWEHRSRMRKVKVGLFAQNPAWPGRRHIRRMAAGLLTTWSQDSVTFEEVTVDFSQEEWALLDPAQKILYRDVMLENFRNLASLGYQLCKHSLITEMEQEEQKPEGRGILQGAGTDWETQLKSKDAILMQSVPGEKTSKSMKMVPAQPHEKPLGFNHCGKFFRKNCHLICTRFCKGEKCYKYKEYGQDFGHFSTLRSHVSTHTGENNLEFSDCGITFNQESSFRKHLTLTGEKSSEYNQHLMSFSLHSSFLAHGQIPTGEKLCEYSDYGKRSSLGVQKKMYAVEECSKCNEHGEVFTGPLSLQICVRPHTGEKPYECGDCGKAFVFQSSLKKHVRSHTGEKPYKCNHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHMRTHTGEKPYECSDCGKAFIDQSSLKKHRRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHIRTHTGEKPYKCIQCGKAFSTSTNLIMHKRIHTG", "length": 572, "header": "tr|A0A286ZKT2-1|A0A286ZKT2_PIG Isoform 1 of Zinc finger protein 177 OS=Sus scrofa OX=9823 GN=ZNF177 PE=3 SV=3 CANONICAL=A0A286ZKT2-1" }, "locus": { "chromosome": "2", "start_pos": 67901000, "end_pos": 67882343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041592.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041592.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032055.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032055.3" } ] } }, { "isoform_ac": "A0A287BLQ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2/entry#A0A287BLQ3-1", "sequence": { "sequence": "MRTHTVGLFAQNPAWPGRRHIRRMAAGLLTTWSQDSVTFEEVTVDFSQEEWALLDPAQKILYRDVMLENFRNLASLAGYQLCKHSLITEMEQEEQKPEGRGILQGAGTDWETQLKSKDAILMQSVPGEKTSKSMKMVPAQPHEKPLGFNHCGKFFRKNCHLICTRFCKGEKCYKYKEYGQDFGHFSTLRSHVSTHTGENNLEFSDCGITFNQESSFRKHLTLTGEKSSEYNQHLMSFSLHSSFLAHGQIPTGEKLCEYSDYGKRSSLGVQKKMYAVEECSKCNEHGEVFTGPLSLQICVRPHTGEKPYECGDCGKAFVFQSSLKKHVRSHTGEKPYKCNHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHMRTHTGEKPYECSDCGKAFIDQSSLKKHRRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHIRTHTGEKPYKCIQCGKAFSTSTNLIMHKRIHTG", "length": 500, "header": "tr|A0A287BLQ3-1|A0A287BLQ3_PIG Computationally mapped isoform of Zinc finger protein 177 OS=Sus scrofa OX=9823 GN=ZNF177 PE=3 SV=2 CANONICAL=A0A286ZKT2-1" }, "locus": { "chromosome": "2", "start_pos": 67901000, "end_pos": 67882343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059042.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059042.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056999.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056999.2" } ] } }, { "isoform_ac": "A0A8D0M5Z6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2/entry#A0A8D0M5Z6-1", "sequence": { "sequence": "MRTHTVGLFAQNPAWPGRRHIRRMAAGLLTTWSQDSVTFEEVTVDFSQEEWALLDPAQKILYRDVMLENFRNLASLGYQLCKHSLITEMEQEEQKPEGRGILQGAGTDWETQLKSKDAILMQSVPGEKTSKSMKMVPAQPHEKPLGFNHCGKFFRKNCHLICTRFCKGEKCYKYKEYGQDFGHFSTLRSHVSTHTGENNLEFSDCGITFNQESSFRKHLTLTGEKSSEYNQHLMSFSLHSSFLAHGQIPTGEKLCEYSDYGKRSSLGVQKKMYAVEECSKCNEHGEVFTGPLSLQICVRPHTGEKPYECGDCGKAFVFQSSLKKHVRSHTGEKPYKCNHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHMRTHTGEKPYECSDCGKAFIDQSSLKKHRRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHIRTHTGEKPYKCIQCGKAFSTSTNLIMHKRIHTG", "length": 499, "header": "tr|A0A8D0M5Z6-1|A0A286ZKT2_PIG Computationally mapped isoform of Zinc finger protein 177 OS=Sus scrofa OX=9823 GN=ZNF177 PE=3 SV=1 CANONICAL=A0A286ZKT2-1" }, "locus": { "chromosome": "2", "start_pos": 67901000, "end_pos": 67882343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038017.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038017.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046310.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046310.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0M5Z6", "url": "https://www.uniprot.org/uniprotkb/A0A8D0M5Z6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" }, { "name": "sequence-specific double-stranded DNA binding", "id": "GO:1990837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990837", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKT2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 531, "end_pos": 533, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZKT2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 572, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZKT2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZKT2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZKT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 242, "end_pos": 272, "start_aa": "Glu", "end_aa": "Asn", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZKT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKT2" }, { "id": "PS50805", "database": 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}, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZKU0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKU0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIE5", "url": "https://www.uniprot.org/uniprotkb/A0A287BIE5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BIE5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQRPQGAPANCSQLLNHLPTSSGLWGTVLPSSSKMLLASPSTPARGRTPSAVERLEADKAKYVKTHQVIARRQEPALRGAPGPLTPHPCNELGPPPSPRTPRSARRGSGRRLPRPDSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGSPRDVASSSPGSTERPAAPGGWVAPQEAPETAGKRALCPTCSLPLSEKERFFNYCGLERALVEVLGAERFSPQSWGADASPQPGTSPLPGSGDTSDWTSSDGGADRRDCAEGGGSEAADSTRDGRPQVSVVERNARVIQWLYGCQRARGPPRESEV", "length": 304, "header": "tr|A0A286ZKU0-1|A0A286ZKU0_PIG Isoform 1 of Family with sequence similarity 110 member D OS=Sus scrofa OX=9823 GN=FAM110D PE=3 SV=1 CANONICAL=A0A286ZKU0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKU0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU0/entry#A0A286ZKU0-1", "sequence": { "sequence": "MQRPQGAPANCSQLLNHLPTSSGLWGTVLPSSSKMLLASPSTPARGRTPSAVERLEADKAKYVKTHQVIARRQEPALRGAPGPLTPHPCNELGPPPSPRTPRSARRGSGRRLPRPDSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGSPRDVASSSPGSTERPAAPGGWVAPQEAPETAGKRALCPTCSLPLSEKERFFNYCGLERALVEVLGAERFSPQSWGADASPQPGTSPLPGSGDTSDWTSSDGGADRRDCAEGGGSEAADSTRDGRPQVSVVERNARVIQWLYGCQRARGPPRESEV", "length": 304, "header": "tr|A0A286ZKU0-1|A0A286ZKU0_PIG Isoform 1 of Family with sequence similarity 110 member D OS=Sus scrofa OX=9823 GN=FAM110D PE=3 SV=1 CANONICAL=A0A286ZKU0-1" }, "locus": { "chromosome": "6", "start_pos": 83584137, "end_pos": 83581440, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059189.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059189.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032173.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032173.1" } ] } }, { "isoform_ac": "A0A287BIE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU0/entry#A0A287BIE5-1", "sequence": { "sequence": "MEMQRPQGAPANCSQLLNHLPTSSGLWGTVLPSSSKMLLASPSTPARGRTPSAVERLEADKAKYVKTHQVIARRQEPALRGAPGPLTPHPCNELGPPPSPRTPRSARRGSGRRLPRPDSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGSPRDVASSSPGSTERPAAPGGWVAPQEAPETAGKRALCPTCSLPLSEKERFFNYCGLERALVEVLGAERFSPQSWGADASPQPGTSPLPGSGDTSDWTSSDGGADRRDCAEGGGSEAADSTRDGRPQVSVVERNARVIQWLYGCQRARGPPRESEV", "length": 306, "header": "tr|A0A287BIE5-1|A0A287BIE5_PIG Computationally mapped isoform of Family with sequence similarity 110 member D OS=Sus scrofa OX=9823 GN=FAM110D PE=3 SV=1 CANONICAL=A0A286ZKU0-1" }, "locus": { "chromosome": "6", "start_pos": 83584137, "end_pos": 83582617, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050399.1", "url": "https://www.ensembl.org/id/ENSSSCT00000050399.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055910.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055910.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 42, "start_aa": "Thr", "end_pos": 42, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr42", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKU0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627555", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627555", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YXH8-1", "protein_name": "Family with sequence similarity 110 member D", "gene_name": "FAM110D", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLSPPGRGEGRGKNNPWAGSVPCGFLQFTALPEGRGGRNLPGSELTLTLSPLTEGAGRTLLCPIPVGSGRTPRKGITVPGSCGSELSLLLAAGGNRSRGDRPALCAGPGPWLSAAAEHSFGVPIPHRVGRRAMVPLGSTPRAVCTSGRDVSPLRLLNRGPESLRAQLAGGSGGRTPSAVERLEADKVKYVKSQQVINSRQEPALRGCSPCCSPRGRRLLALQRCHELCHGSDLSCDGSRKAPCPSSPVPRRGGGSRRLLRPDSLVIYRQKRDCPVINKENTKGYGLVRRLFQGPLRDKPPSSPSAQGSDKAPESPMLWVSMEQAEDVRTPGAGGSSSSTVPMPDSPVPQPPEAPSLAQPPASPSPSKPALGLRLSLPLSEKERFFNYCGLDRAMVEGLGKERFVPAGWDAASARLHGSCEWEPSQASGCSGEDAGPGEEEPDTRLCSAISVVERNARVIKWLYGCQRAWAAAKESTV", "length": 477 }, "evidence": [ { "id": "A0A286ZKU0", "url": "https://omabrowser.org/oma/group/A0A286ZKU0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6H7I7-1", "protein_name": "Protein FAM110D", "gene_name": "FAM110D", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLLASPSTPSRGRTPSAVERLEADKAKYVKTHQVIARRQEPALRGGPGPLTPHTCNELGPPPSPRTPRPARRGSGRRLPRPDSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGSPRDVASSSAGSSERPAAPGGWTAPQDAPEAAGKRALCPTCSLPLSEKERFFNYCGLERALVEVLGAERFSPQSWGADASPQPGTSPPPGSGDASDWTSSEGGADRRDGAEGGGSAAAGSERDGRPQVSVVERNARVIQWLYGCQRARGPPRESEV", "length": 270 }, "evidence": [ { "id": "A0A286ZKU0", "url": "https://omabrowser.org/oma/group/A0A286ZKU0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZKX3-1", "protein_name": "Family with sequence similarity 110, member D", "gene_name": "Fam110d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLASPTTPSRGRTPSAVERLEADKAKYVKTHQVIVRRQEPALRGGSGPLTPHPCNELGASASPRTPGPARRGSGRRQPRPDSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGATRDAAPSSPAPTERPGAPAGWAGSPDTPEATGKRALCPTCSLPLSEKERFFNYCGLERALVEVLGAERFSPQSWGAEHSPQVATSPPPGSGDTSDWTSSDRDAGSPDCAGGGGGSEAAGSARDGRPTVSVVERNARVIQWLYGCQRARAPPRESEV", "length": 271 }, "evidence": [ { "id": "A0A286ZKU0", "url": "https://omabrowser.org/oma/group/A0A286ZKU0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80X91-1", "protein_name": "Protein FAM110D", "gene_name": "Fam110d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLSSPTTPSRGRTPSAVERLEADKAKYVKTHQVIVRRQEPALRGGPGPLTPHPCNELGASASPRTPGPARRGSGRRQPRPDSLIFYRQKRDCKASVNKENAKGQGLVRRLFLGATRDAAPSSPAPTERPGAPAGWAGSPDTPEATGKRAVCPTCSLPLSEKERFFNYCGLERALVEVLGAERFSPQSWGAEHGPQVATSPPPGSGDTSDWTSSDRDAGSPDCAGGGGGSEAAGSARDGRPTVSVVERNARVIQWLYGCQRARAPPRESEV", "length": 271 }, "evidence": [ { "id": "A0A286ZKU0", "url": "https://omabrowser.org/oma/group/A0A286ZKU0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8TAY7-1", "protein_name": "Protein FAM110D", "gene_name": "FAM110D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZKU0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZKU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU0" }, { "id": "PF14160", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14160" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Centrosome-associated FAM110 C-terminal", "eco_id": "ECO_0000259", "start_pos": 179, "end_pos": 295, "start_aa": "Thr", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZKU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU0" }, { "id": "PF14161", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14161" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Centrosome-associated FAM110 N-terminal", "eco_id": "ECO_0000259", "start_pos": 46, "end_pos": 76, "start_aa": "Gly", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 42 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 10, "end_pos": 12 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], 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"title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZKU7-1", "uniprot_ac": "A0A286ZKU7", "uniprot_id": "A0A286ZKU7_PIG", "mass": { "chemical_mass": 8993.0, "monoisotopic_mass": 8993.0 }, "refseq": {}, "gene_names": [ { "name": "CTXN2", "type": "recommended", "evidence": [ { "id": "A0A286ZKU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU7" } ] } ], "protein_names": [ { "name": "Cortexin 2", "type": "synonym", "evidence": [ { "id": "A0A286ZKU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKU7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], 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"MEMEANDHFNFTGLPPAPAASGLKPSPSSGEGLYTNGSPMNFPQQGKSLNGDVNVNGLSTVSHTTTSGILNSAPHSSSTSHLHHPSVAYDCLWNYSQYPSANPGSNLKDPPLLSQFSGGQYPLNGILGGSRQPSSPSHNTNLRAGSQEFWANGTQSPMGLNFDSQELYDSFPDQNFEVMPNGPPSFFTSPQTSPMLGSSIQTFAPSQEVGSVIHPDEAAEKELTSVVAENGTGLVGSLELEEEQPELKMCGYNGSVPSVESLHQEVSVLVPDPTVSCLDDPSHLPDQLEDTPILSEVSLEPFNTLAPEPVSGGLYGIDDTELMSAEDKLPLEDSPVISALDCPSLNNATAFSLLADDSQTSASIFASPTSPPVLGESVLQDNSFDLNNGSDAEQEEMETQASDFPPPLTRSAPNQSSTIQLHPAASTAVSPTASPAVSLAVSSAASPEISPEVSPAVSPAASQEISPAAFPTVSATSSAALPPVSSEVHLTASPVTSPKATPATSPAASFPTASPADNHVSSFPETTADLEEIAGGVTPSGSGDVLRRRIATPEEVRLPLQHGWRREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHNVRREHFSFSPRMPVGDFFEERDTPEGLQWVQLSAEEIPSRIQAITGKRGRPRNTEKAKTKEVPKVKRGRGRPPKVKITEMLNKTENRLLKKLEAQETLNEEDKAKMSKIKKKIKQKVQRGDCQAPSQGQARNKRKQETKSLKQKETKKKSKADKEKVKTKQERLKEKVKKEKKEKVKMKEKEEVAKAKSACKKADKMLATQRRLEERQRQQMILEEMKKPTEDMCLTDHQPLPDFSRIPGLILPSGAFSDCLTIVEFLHSFGKVLGFDPAKDVPSLGVLQEGLLCQGDSLGEVQDLLVRLLKAALYDPGLPSCCQSLKILGEKVSEIPLTRDNVSEILRCFLMAYGVEPALCDSLRTQPFQAQPPQQKAAVLAFLVHELNGSTLIINEIDKTLENMSSYRKNKWIVEGRLRRLKTALAKRTGRPEIELQGPEEGLGRRRSSRIMEETSGMEEEEEEETAAAVHGRRGRRDGEVDITTSSIPELERQIEKLSKRQLFFRKKLLHSSQMLRAVSLGQDRYRRRYWVLPYLTGIFVEGTEGSLVPEDVIKQETDSLKVATHSSPSPAPFSLKRELTGSSTSASSPARARGRPRKTKPGSMQPRHLKSPAKGQGSEPPQAQLQPETQLHPPAQPQPQPLSHPHSHNGFLEPEGSPLVLGQSQHDLSQSAFLSWLSQTQSHGSLLSSSVLTPDSSPGKLDPTPSQPPEEPEPDEAEASPDTQAPWFSFSTQIPCNAAPTPPPAVSEDQPTPSPQLPAFSKPVNRPSAANSHNPVQLCSTPLPGVTPKRRMGDPGEIPQSHTGLGQPKRRGRPPSKFFKQMEQRYLTQLTAQPVPSEMHSGWWWIRDPETLDATLKALHPRGIREKALHKHLNKHRDFLQEVCLRPSTDPIFEPSQLPAFQEGIMSWSPKEKTYETDLAVLQWVEELEQRVILSDLQIRGWTCPSPDSIREDLAYCEHLPDYQEDITWRGRGKEGLAPQRKTTNPLDLAVMRLAALEQNVERRYLREPLWPAHEVVLEKALLSTPSGAPQCTTTEISYEITPRIRAWRQTLERCRSAAQVCLCLAQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEGELTQKPGFPKRGQKRKSSYMLTFPEGDGRRRRLLSRGRESPAVPRYSEEGLSPAKRRRLSMRNHHSDLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQGKQAKL", "length": 1909, "header": "tr|A0A286ZKV9-1|A0A286ZKV9_PIG Isoform 1 of Bromodomain adjacent to zinc finger domain protein 2A OS=Sus scrofa OX=9823 GN=BAZ2A PE=3 SV=2 CANONICAL=A0A286ZKV9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9/entry#A0A286ZKV9-1", "sequence": { "sequence": "MEMEANDHFNFTGLPPAPAASGLKPSPSSGEGLYTNGSPMNFPQQGKSLNGDVNVNGLSTVSHTTTSGILNSAPHSSSTSHLHHPSVAYDCLWNYSQYPSANPGSNLKDPPLLSQFSGGQYPLNGILGGSRQPSSPSHNTNLRAGSQEFWANGTQSPMGLNFDSQELYDSFPDQNFEVMPNGPPSFFTSPQTSPMLGSSIQTFAPSQEVGSVIHPDEAAEKELTSVVAENGTGLVGSLELEEEQPELKMCGYNGSVPSVESLHQEVSVLVPDPTVSCLDDPSHLPDQLEDTPILSEVSLEPFNTLAPEPVSGGLYGIDDTELMSAEDKLPLEDSPVISALDCPSLNNATAFSLLADDSQTSASIFASPTSPPVLGESVLQDNSFDLNNGSDAEQEEMETQASDFPPPLTRSAPNQSSTIQLHPAASTAVSPTASPAVSLAVSSAASPEISPEVSPAVSPAASQEISPAAFPTVSATSSAALPPVSSEVHLTASPVTSPKATPATSPAASFPTASPADNHVSSFPETTADLEEIAGGVTPSGSGDVLRRRIATPEEVRLPLQHGWRREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHNVRREHFSFSPRMPVGDFFEERDTPEGLQWVQLSAEEIPSRIQAITGKRGRPRNTEKAKTKEVPKVKRGRGRPPKVKITEMLNKTENRLLKKLEAQETLNEEDKAKMSKIKKKIKQKVQRGDCQAPSQGQARNKRKQETKSLKQKETKKKSKADKEKVKTKQERLKEKVKKEKKEKVKMKEKEEVAKAKSACKKADKMLATQRRLEERQRQQMILEEMKKPTEDMCLTDHQPLPDFSRIPGLILPSGAFSDCLTIVEFLHSFGKVLGFDPAKDVPSLGVLQEGLLCQGDSLGEVQDLLVRLLKAALYDPGLPSCCQSLKILGEKVSEIPLTRDNVSEILRCFLMAYGVEPALCDSLRTQPFQAQPPQQKAAVLAFLVHELNGSTLIINEIDKTLENMSSYRKNKWIVEGRLRRLKTALAKRTGRPEIELQGPEEGLGRRRSSRIMEETSGMEEEEEEETAAAVHGRRGRRDGEVDITTSSIPELERQIEKLSKRQLFFRKKLLHSSQMLRAVSLGQDRYRRRYWVLPYLTGIFVEGTEGSLVPEDVIKQETDSLKVATHSSPSPAPFSLKRELTGSSTSASSPARARGRPRKTKPGSMQPRHLKSPAKGQGSEPPQAQLQPETQLHPPAQPQPQPLSHPHSHNGFLEPEGSPLVLGQSQHDLSQSAFLSWLSQTQSHGSLLSSSVLTPDSSPGKLDPTPSQPPEEPEPDEAEASPDTQAPWFSFSTQIPCNAAPTPPPAVSEDQPTPSPQLPAFSKPVNRPSAANSHNPVQLCSTPLPGVTPKRRMGDPGEIPQSHTGLGQPKRRGRPPSKFFKQMEQRYLTQLTAQPVPSEMHSGWWWIRDPETLDATLKALHPRGIREKALHKHLNKHRDFLQEVCLRPSTDPIFEPSQLPAFQEGIMSWSPKEKTYETDLAVLQWVEELEQRVILSDLQIRGWTCPSPDSIREDLAYCEHLPDYQEDITWRGRGKEGLAPQRKTTNPLDLAVMRLAALEQNVERRYLREPLWPAHEVVLEKALLSTPSGAPQCTTTEISYEITPRIRAWRQTLERCRSAAQVCLCLAQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEGELTQKPGFPKRGQKRKSSYMLTFPEGDGRRRRLLSRGRESPAVPRYSEEGLSPAKRRRLSMRNHHSDLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQGKQAKL", "length": 1909, "header": "tr|A0A286ZKV9-1|A0A286ZKV9_PIG Isoform 1 of Bromodomain adjacent to zinc finger domain protein 2A OS=Sus scrofa OX=9823 GN=BAZ2A PE=3 SV=2 CANONICAL=A0A286ZKV9-1" }, "locus": { "chromosome": "5", "start_pos": 21982837, "end_pos": 21936509, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049648.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049648.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032193.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032193.3" } ] } }, { "isoform_ac": "A0A287B622-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9/entry#A0A287B622-1", "sequence": { "sequence": "MEMEANDHFNFTGLPPAPAASGLKPSPSSGEGLYTNGSPMNFPQQGKSLNGDVNVNGLSTVSHTTTSGILNSAPHSSSTSHLHHPSVAYDCLWNYSQYPSANPGSNLKDPPLLSQFSGGQYPLNGILGGSRQPSSPSHNTNLRAGSQEFWANGTQSPMGLNFDSQELYDSFPDQNFEEVGSVIHPDEAAEKELTSVVAENGTGLVGSLELEEEQPELKMCGYNGSVPSVESLHQEVSVLVPDPTVSCLDDPSHLPDQLEDTPILSEVSLEPFNTLAPEPVSGGLYGIDDTELMSAEDKLPLEDSPVISALDCPSLNNATAFSLLADDSQTSASIFASPTSPPVLGESVLQDNSFDLNNGSDAEQEEMETQASDFPPPLTRSAPNQSSTIQLHPAASTAVSPTASPAVSLAVSSAASPEISPEVSPAVSPAASQEISPAAFPTVSATSSAALPPVSSEVHLTASPVTSPKATPATSPAASFPTASPADNHVSSFPETTADLEEIAGGVTPSGSGDVLRRRIATPEEVRLPLQHGWRREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHNVRREHFSFSPRMPVGDFFEERDTPEGLQWVQLSAEEIPSRIQAITGKRGRPRNTEKAKTKEVPKVKRGRGRPPKVKITEMLNKTENRLLKKLEAQETLNEEDKAKMSKIKKKIKQKVQRGDCQAPSQGQARNKRKQETKSLKQKETKKKSKADKEKVKTKQERLKEKVKKEKKEKVKMKEKEEVAKAKSACKKADKMLATQRRLEERQRQQMILEEMKKPTEDMCLTDHQPLPDFSRIPGLILPSGAFSDCLTIVEFLHSFGKVLGFDPAKDVPSLGVLQEGLLCQGDSLGEVQDLLVRLLKAALYDPGLPSCCQSLKILGEKVSEIPLTRDNVSEILRCFLMAYGVEPALCDSLRTQPFQAQPPQQKAAVLAFLVHELNGSTLIINEIDKTLENMSSYRKNKWIVEGRLRRLKTALAKRTGRPEIELQGPEEGLGRRRSSRIMEETSGMEEEEEEETAAAVHGRRGRRDGEVDITTSSIPELERQIEKLSKRQLFFRKKLLHSSQMLRAVSLGQDRYRRRYWVLPYLTGIFVEGTEGSLVPEDVIKQETDSLKVATHSSPSPAPFSLKRELTGSSTSASSPARARGRPRKTKPGSMQPRHLKSPAKGQGSEPPQAQLQPETQLHPPAQPQPQPLSHPHSHNGFLEPEGSPLVLGQSQHDLSQSAFLSWLSQTQSHGSLLSSSVLTPDSSPGKLDPTPSQPPEEPEPDEAEASPDTQAPWFSFSTQIPCNAAPTPPPAVSEDQPTPSPQLPAFSKPVNRPSAANSHNPVQLCSTPLPGVTPKRRMGDPGEIPQSHTGLGQPKRRGRPPSKFFKQMEQRYLTQLTAQPVPSEMHSGWWWIRDPETLDATLKALHPRGIREKALHKHLNKHRDFLQEVCLRPSTDPIFEPSQLPAFQEGIMSWSPKEKTYETDLAVLQWVEELEQRVILSDLQIRGWTCPSPDSIREDLAYCEHLPDYQEDITWRGRGKEGLAPQRKTTNPLDLAVMRLAALEQNVERRYLREPLWPAHEVVLEKALLSTPSGAPQCTTTEISYEITPRIRAWRQTLERCRSAAQVCLCLAQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEGELTQKPGFPKRGQKRKSSYMLTFPEGDGRRRRLLSRGRESPAVPRYSEEGLSPAKRRRLSMRNHHSDLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQGKQAKL", "length": 1879, "header": "tr|A0A287B622-1|A0A287B622_PIG Computationally mapped isoform of Bromodomain adjacent to zinc finger domain protein 2A OS=Sus scrofa OX=9823 GN=BAZ2A PE=3 SV=2 CANONICAL=A0A286ZKV9-1" }, "locus": { "chromosome": "5", "start_pos": 21982837, "end_pos": 21936509, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059488.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059488.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051908.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051908.3" } ] } }, { "isoform_ac": "A0A287BM28-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9/entry#A0A287BM28-1", "sequence": { "sequence": "MGNLPDPQGPADVSGNLVIQAGPGCPHRTEMYFQSSDSEMTRAVAENLAEMEANDHFNFTGLPPAPAASGLKPSPSSGEGLYTNGSPMNFPQQGKSLNGDVNVNGLSTVSHTTTSGILNSAPHSSSTSHLHHPSVAYDCLWNYSQYPSANPGSNLKDPPLLSQFSGGQYPLNGILGGSRQPSSPSHNTNLRAGSQEFWANGTQSPMGLNFDSQELYDSFPDQNFEVMPNGPPSFFTSPQTSPMLGSSIQTFAPSQEVGSVIHPDEAAEKELTSVVAENGTGLVGSLELEEEQPELKMCGYNGSVPSVESLHQEVSVLVPDPTVSCLDDPSHLPDQLEDTPILSEVSLEPFNTLAPEPVSGGLYGIDDTELMSAEDKLPLEDSPVISALDCPSLNNATAFSLLADDSQTSASIFASPTSPPVLGESVLQDNSFDLNNGSDAEQEEMETQASDFPPPLTRSAPNQSSTIQLHPAASTAVSPTASPAVSLAVSSAASPEISPEVSPAVSPAASQEISPAAFPTVSATSSAALPPVSSEVHLTASPVTSPKATPATSPAASFPTASPADNHVSSFPETTADLEEIAGGVTPSGSGDVLRRRIATPEEVRLPLQHGWRREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNVVHNVRREHFSFSPRMPVGDFFEERDTPEGLQWVQLSAEEIPSRIQAITGKRGRPRNTEKAKTKEVPKVKRGRGRPPKVKITEMLNKTENRLLKKLEAQETLNEEDKAKMSKIKKKIKQKVQRGDCQAPSQGQARNKRKQETKSLKQKETKKKSKADKEKVKTKQERLKEKVKKEKKEKVKMKEKEEVAKAKSACKKADKMLATQRRLEERQRQQMILEEMKKPTEDMCLTDHQPLPDFSRIPGLILPSGAFSDCLTIVEFLHSFGKVLGFDPAKDVPSLGVLQEGLLCQGDSLGEVQDLLVRLLKAALYDPGLPSCCQSLKILGEKVSEIPLTRDNVSEILRCFLMAYGVEPALCDSLRTQPFQAQPPQQKAAVLAFLVHELNGSTLIINEIDKTLENMSSYRKNKWIVEGRLRRLKTALAKRTGRPEIELQGPEEGLGRRRSSRIMEETSGMEEEEEEETAAAVHGRRGRRDGEVDITTSSIPELERQIEKLSKRQLFFRKKLLHSSQMLRAVSLGQDRYRRRYWVLPYLTGIFVEGTEGSLVPEDVIKQETDSLKVATHSSPSPAPFSLKRELTGSSTSASSPARARGRPRKTKPGSMQPRHLKSPAKGQGSEPPQAQLQPETQLHPPAQPQPQPLSHPHSHNGFLEPEGSPLVLGQSQHDLSQSAFLSWLSQTQSHGSLLSSSVLTPDSSPGKLDPTPSQPPEEPEPDEAEASPDTQAPWFSFSTQIPCNAAPTPPPAVSEDQPTPSPQLPAFSKPVNRPSAANSHNPVQLCSTPLPGVTPKRRMGDPGEIPQSHTGLGQPKRRGRPPSKFFKQMEQRYLTQLTAQPVPSEMHSGWWWIRDPETLDATLKALHPRGIREKALHKHLNKHRDFLQEVCLRPSTDPIFEPSQLPAFQEGIMSWSPKEKTYETDLAVLQWVEELEQRVILSDLQIRGWTCPSPDSIREDLAYCEHLPDYQEDITWRGRGKEGLAPQRKTTNPLDLAVMRLAALEQNVERRYLREPLWPAHEVVLEKALLSTPSGAPQCTTTEISYEITPRIRAWRQTLERCRSAAQVCLCLAQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEGELTQKPGFPKRGQKRKSSYMLTFPEGDGRRRRLLSRGRESPAVPRYSEEGLSPAKRRRLSMRNHHSDLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQGKQAKL", "length": 1957, "header": "tr|A0A287BM28-1|A0A287BM28_PIG Computationally mapped isoform of Bromodomain adjacent to zinc finger domain protein 2A OS=Sus scrofa OX=9823 GN=BAZ2A PE=3 SV=3 CANONICAL=A0A286ZKV9-1" }, "locus": { "chromosome": "5", "start_pos": 21982837, "end_pos": 21936509, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055700.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055700.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057680.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057680.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1305, "start_aa": "Thr", "end_pos": 1305, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1305", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1342, "start_aa": "Thr", "end_pos": 1342, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1342", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1353, "start_aa": "Thr", "end_pos": 1353, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1353", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 274, "start_aa": "Thr", "end_pos": 274, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr274", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 432, "start_aa": "Thr", "end_pos": 432, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr432", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 501, "start_aa": "Thr", "end_pos": 501, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr501", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKV9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKV9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKV9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKV9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKV9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKV9" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": 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"database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TSVQTHM", "url": "https://omabrowser.org/oma/group/TSVQTHM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZL09", "url": "https://www.orthodb.org/?gene=A0A286ZL09", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23226", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23226", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23226:SF430", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23226:SF430", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24390", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24390", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24390:SF238", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24390:SF238", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013846094", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013846094", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZL09-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0K4L9", "url": "https://www.uniprot.org/uniprotkb/A0A8D0K4L9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0K4L9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0K4L9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPVAFEDVAVNFTPEEWALLGPSQKKLYRDVMRETLRNLASVGKKWEDHNTEDQYKVQGRNLRSQTLESLCKSEEGSQCGEDFSLTINLNLNKDSTAVKPWECSMCEKVFMSRSSLNRHVRSHIVPKPSKYQEYGKKPYKCKVCGKAFSYLQPFQKHESNHGIEKSYKCKECGKSFRYRQSVRKHERTHTGEKPYQCKQCGKAFRYHQTFQTHERTHTGEKPYECKQCGKALSCPSSFRSHARTHTGEKPYECKKCSKAFSCPSSLRKHERTHTGEKPYDCKECGKAFISLGSFQRHMITHTGVGPYKCKDCGKAFNCPSSYRIHERSHTGEKPYECKQCGRAFSCSSSFRTHERTHTGEKPYQCKECGKAFHWLTTFQVHVRTHTGEKPYICKLCGKALSCPTSFRRHERTHTAEKPYECKQCGKTFSSPLGLQIHGRTHTGEKPYKCEECGKAFVSLTSFRRHMMTHTGDGPYKCKECGKAFNCPSSFRIHERTHTGEKPYECKICGKAFSCSSYVQVHERTHTGEKPYECKECGKAFIYRTTFRGHMRVHTGEKPYKCKDCGKAFSRPSSFRSHERIHTGEKLLECKHCGKAFNWPTSLHKHVMRMHTG", "length": 613, "header": "tr|A0A286ZL09-1|A0A286ZL09_PIG Isoform 1 of Zinc finger protein 791 OS=Sus scrofa OX=9823 GN=LOC100521431 PE=3 SV=1 CANONICAL=A0A286ZL09-1" }, "isoforms": [ { "isoform_ac": "A0A286ZL09-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09/entry#A0A286ZL09-1", "sequence": { "sequence": "MEPVAFEDVAVNFTPEEWALLGPSQKKLYRDVMRETLRNLASVGKKWEDHNTEDQYKVQGRNLRSQTLESLCKSEEGSQCGEDFSLTINLNLNKDSTAVKPWECSMCEKVFMSRSSLNRHVRSHIVPKPSKYQEYGKKPYKCKVCGKAFSYLQPFQKHESNHGIEKSYKCKECGKSFRYRQSVRKHERTHTGEKPYQCKQCGKAFRYHQTFQTHERTHTGEKPYECKQCGKALSCPSSFRSHARTHTGEKPYECKKCSKAFSCPSSLRKHERTHTGEKPYDCKECGKAFISLGSFQRHMITHTGVGPYKCKDCGKAFNCPSSYRIHERSHTGEKPYECKQCGRAFSCSSSFRTHERTHTGEKPYQCKECGKAFHWLTTFQVHVRTHTGEKPYICKLCGKALSCPTSFRRHERTHTAEKPYECKQCGKTFSSPLGLQIHGRTHTGEKPYKCEECGKAFVSLTSFRRHMMTHTGDGPYKCKECGKAFNCPSSFRIHERTHTGEKPYECKICGKAFSCSSYVQVHERTHTGEKPYECKECGKAFIYRTTFRGHMRVHTGEKPYKCKDCGKAFSRPSSFRSHERIHTGEKLLECKHCGKAFNWPTSLHKHVMRMHTG", "length": 613, "header": "tr|A0A286ZL09-1|A0A286ZL09_PIG Isoform 1 of Zinc finger protein 791 OS=Sus scrofa OX=9823 GN=LOC100521431 PE=3 SV=1 CANONICAL=A0A286ZL09-1" }, "locus": { "chromosome": "2", "start_pos": 66419992, "end_pos": 66399073, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057037.2", "url": "https://www.ensembl.org/id/ENSSSCT00000057037.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032249.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032249.1" } ] } }, { "isoform_ac": "A0A8D0K4L9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09/entry#A0A8D0K4L9-1", "sequence": { "sequence": "MRETLRNLASVGKKWEDHNTEDQYKVQGRNLRSQTLESLCKSEEGSQCGEDFSLTINLNLNKDSTAVKPWECSMCEKVFMSRSSLNRHVRSHIVPKPSKYQEYGKKPYKCKVCGKAFSYLQPFQKHESNHGIEKSYKCKECGKSFRYRQSVRKHERTHTGEKPYQCKQCGKAFRYHQTFQTHERTHTGEKPYECKQCGKALSCPSSFRSHARTHTGEKPYECKKCSKAFSCPSSLRKHERTHTGEKPYDCKECGKAFISLGSFQRHMITHTGVGPYKCKDCGKAFNCPSSYRIHERSHTGEKPYECKQCGRAFSCSSSFRTHERTHTGEKPYQCKECGKAFHWLTTFQVHVRTHTGEKPYICKLCGKALSCPTSFRRHERTHTAEKPYECKQCGKTFSSPLGLQIHGRTHTGEKPYKCEECGKAFVSLTSFRRHMMTHTGDGPYKCKECGKAFNCPSSFRIHERTHTGEKPYECKICGKAFSCSSYVQVHERTHTGEKPYECKECGKAFIYRTTFRGHMRVHTGEKPYKCKDCGKAFSRPSSFRSHERIHTGEKLLECKHCGKAFNWPTSLHKHVMRMHTG", "length": 581, "header": "tr|A0A8D0K4L9-1|A0A286ZL09_PIG Computationally mapped isoform of Zinc finger protein 791 OS=Sus scrofa OX=9823 GN=LOC100521431 PE=3 SV=1 CANONICAL=A0A286ZL09-1" }, "locus": { "chromosome": "2", "start_pos": 66401644, "end_pos": 66399073, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014991.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014991.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014587.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014587.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0K4L9", "url": "https://www.uniprot.org/uniprotkb/A0A8D0K4L9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521431", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521431", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1LUZ0-1", "protein_name": "Zinc finger protein 791", "gene_name": "Zfp791", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSVTFEDVCVTFSQEEWAVLRPAQKKLYRDVMWETMANLASVGGELEDEDVTNQYRIQEENVRSYMIQRLYESKEVTQHRESFSQIPNTGVTKITAGGKPYNCSVCGKGFMLCSSLTRHVRSHPGHELDGFKCGEKRYKCKECGATFSYLKSFQRHERTHAGENPYRCKHCGKTFIYYQPFQTHERTHIGERIYQCKHCGKVLSSPGSLRIHERIHTGERPYVCEKCGKAFSCPSSIQIHGRTHTGERPYECKECGKAFISRTSVKTHMVTHSGDAHKPHKCKDCGKAFLRPCFLRVHARIHTGEKPYVCKQCGKAFRCSTSIQIHKRTHTGEKPYTCKECGKAFSAHSAFRVHRRVHTGEKPYKCRDCGKAFICLTYCRMHERKHTREKPYECQQCGKAFISLENFQRHVKTHTEDIPYKCKECGKAFVFLSALRAHERIHTGEKPYECKQCGKTFRCSSYVQVHRRIHTGEKPYECKECGKTFIYSTSFRGHMRMHTGEKPYKCKECEKAFRLGSSLKRHERTHSGKKCV", "length": 533 }, "evidence": [ { "id": "A0A286ZL09", "url": "https://omabrowser.org/oma/group/A0A286ZL09/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3KP31-1", "protein_name": "Zinc finger protein 791", "gene_name": "ZNF791", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDSVAFEDVSVSFSQEEWALLAPSQKKLYRDVMQETFKNLASIGEKWEDPNVEDQHKNQGRNLRSHTGERLCEGKEGSQCAENFSPNLSVTKKTAGVKPYECTICGKAFMRLSSLTRHMRSHTGYELFEKPYKCKECEKAFSYLKSFQRHERSHTGEKPYKCKQCGKTFIYHQPFQRHERTHIGEKPYECKQCGKALSCSSSLRVHERIHTGEKPYECKQCGKAFSCSSSIRVHERTHTGEKPYACKECGKAFISHTSVLTHMITHNGDRPYKCKECGKAFIFPSFLRVHERIHTGEKPYKCKQCGKAFRCSTSIQIHERIHTGEKPYKCKECGKSFSARPAFRVHVRVHTGEKPYKCKECGKAFSRISYFRIHERTHTGEKPYECKKCGKTFNYPLDLKIHKRNHTGEKPYECKECAKTFISLENFRRHMITHTGDGPYKCRDCGKVFIFPSALRTHERTHTGEKPYECKQCGKAFSCSSYIRIHKRTHTGEKPYECKECGKAFIYPTSFQGHMRMHTGEKPYKCKECGKAFSLHSSFQRHTRIHNYEKPLECKQCGKAFSVSTSLKKHMRMHNR", "length": 576 }, "evidence": [ { "id": "A0A286ZL09", "url": "https://omabrowser.org/oma/group/A0A286ZL09/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09" } ], "pmid": "" }, { "name": "sequence-specific double-stranded DNA binding", "id": "GO:1990837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990837", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL09", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL09" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 12, "end_pos": 14, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"categories": [ "Protein Classification" ] }, { "id": "PTHR45616:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45616:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00038", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00038", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16208", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16208", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6809371", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020947339", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947339", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZL11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZL11-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2M2", "url": "https://www.uniprot.org/uniprotkb/A0A287A2M2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2M2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2M2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MACRSCVVGFSSLSSCEVTPAGGPRPEASGWGSCGAPGPSFSSSSLTGCWAAGTVPKVTVNSSLLEPLDLKVDPAIQQQKHQEKEEMKALNDKFASLIGKVQALEQRNQLLETRWCFLQSQDSAAFDLGHLYKDYQGRLQEELRKVSQERSQLEANLMQMLEKVEEFRIRYEDELSKRTDLEFTFVQLKKDLDTECLRRTELETKLKDLQSFVELMKSIYEQELKDLAAQVKDVSVTVGMDSRCHLDLSGIVEEVKAQYDAIAARSLEEAEAYSRSQLEERAACSAELGNSLQSSRREIADLNVRIQKLRSQILSIKSHCLKLEENIKAAEEQGELAFQDAKAKLAQLEDALQRAKKDMAQQLREYQELMNVKLALDVEIATYRKLVEGEESRMDLPSATMVSAVKSRSRTATTKSGLSRAPFRRRKNRKGPVIKITEMSEKFLSQESEVSE", "length": 452, "header": "tr|A0A286ZL11-1|A0A286ZL11_PIG Isoform 1 of Keratin 80 OS=Sus scrofa OX=9823 GN=KRT80 PE=4 SV=2 CANONICAL=A0A286ZL11-1" }, "isoforms": [ { "isoform_ac": "A0A286ZL11-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11/entry#A0A286ZL11-1", "sequence": { "sequence": "MACRSCVVGFSSLSSCEVTPAGGPRPEASGWGSCGAPGPSFSSSSLTGCWAAGTVPKVTVNSSLLEPLDLKVDPAIQQQKHQEKEEMKALNDKFASLIGKVQALEQRNQLLETRWCFLQSQDSAAFDLGHLYKDYQGRLQEELRKVSQERSQLEANLMQMLEKVEEFRIRYEDELSKRTDLEFTFVQLKKDLDTECLRRTELETKLKDLQSFVELMKSIYEQELKDLAAQVKDVSVTVGMDSRCHLDLSGIVEEVKAQYDAIAARSLEEAEAYSRSQLEERAACSAELGNSLQSSRREIADLNVRIQKLRSQILSIKSHCLKLEENIKAAEEQGELAFQDAKAKLAQLEDALQRAKKDMAQQLREYQELMNVKLALDVEIATYRKLVEGEESRMDLPSATMVSAVKSRSRTATTKSGLSRAPFRRRKNRKGPVIKITEMSEKFLSQESEVSE", "length": 452, "header": "tr|A0A286ZL11-1|A0A286ZL11_PIG Isoform 1 of Keratin 80 OS=Sus scrofa OX=9823 GN=KRT80 PE=4 SV=2 CANONICAL=A0A286ZL11-1" }, "locus": { "chromosome": "5", "start_pos": 17505496, "end_pos": 17484580, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049866.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049866.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032136.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032136.2" } ] } }, { "isoform_ac": "A0A287A2M2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11/entry#A0A287A2M2-1", "sequence": { "sequence": "MACRSCVVGFSSLSSCEVTPAGGPRPEASGWGSCGAPGPSFSSSSLTGCWAAGTVPKVTVNSSLLEPLDLKVDPAIQQQKHQEKEEMKALNDKFASLIGKVQALEQRNQLLETRWCFLQSQDSAAFDLGHLYKDYQGRLQEELRKVSQERSQLEANLMQMLEKVEEFRIRYEDELSKRTDLEFTFVQLKKDLDTECLRRTELETKLKDLQSFVELMKSIYEQELKDLAAQVKDVSVTVGMDSRCHLDLSGIVEEVKAQYDAIAARSLEEAEAYSRSQLEERAACSAELGNSLQSSRREIADLNVRIQKLRSQILSIKSHCLKLEENIKAAEEQGELAFQDAKAKLAQLEDALQRAKKDMAQQLREYQELMNVKLALDVEIATYRKLVEGEESRMDLPSATMVSAVKSRSRTAPSLPHPLCSL", "length": 422, "header": "tr|A0A287A2M2-1|A0A287A2M2_PIG Computationally mapped isoform of Keratin 80 OS=Sus scrofa OX=9823 GN=KRT80 PE=4 SV=2 CANONICAL=A0A286ZL11-1" }, "locus": { "chromosome": "5", "start_pos": 17505496, "end_pos": 17484705, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046390.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046390.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038188.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038188.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6805567", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "resource": "Reactome", "description": "Keratinization" }, { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZRD8-1", "protein_name": "Keratin 80", "gene_name": "KRT80", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTNLCKAFSSGSLCSWEASGRMSQGRAGSTSPDSLGHCSPSSVTSPSCGAPYGDGGYQSSSYLSIDGRLLAPVHLDIDTDFHAVREQEKEDIKLLNNQFVTLIEKVQCLEQQNKILTTRWNFLKDQDNSHSESDVKAIYDQYMSKMNQEMQALNYEQENLESELTEVLSTMDNFRSKYEDEIRLCSGMEYTFMELKKDLDASTLHRTELEVKLSGLQELMDLKKTIYEQELEELLTEIKDISVVLGIDNTCKLDLSRIVEEVRAQYEALALRSWEEAEALTRRKLNEGNTQSATYGGHLLDSRREIADLNIQIQKLRSCIVSQKSQCLYLEENIKEAGEHGEMALKDAKAKLVKLEEALQKSKEDMAHLVKEYQELMNIKLALDLEILTYRKLVEGEESSMESPIPTVISTIHSRPKHLSASTLRNSKLFARGTSSANGEMKLNGGNTKPLPSRSHSNNLAAPEADPYTCSARPKLSSLLTEECS", "length": 485 }, "evidence": [ { "id": "A0A286ZL11", "url": "https://omabrowser.org/oma/group/A0A286ZL11/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3II07-1", "protein_name": "Keratin, type II cytoskeletal 80", "gene_name": "Krt80", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAYRSCVVGFSSLSGCEVTSAGRLQPGTSGWGSCGLPGPGFSSRSLTSCRPAGIIPKVTVNSSLLVPLDLKVDPAVQQQKNQEKEEMKVLNDKFASLIGKVQALEQRNQLLETRWSFLQGQGTTTFDLSHHYETFQGSLQEELRKVSQERGQLEANLLQVLEKVEEFRIRYEDEISKRTDLEFTFVQLKKDLDAECLRRTELETKLKGLQSFVELMRTVYEQELKDLTAQVKDVSVTVGLDSRCHIDLSGIVEEVKAQYDAIAARSLEEAEAYSRSQLEERAARSAEFGSSLQSSRCEIADLNVRIQKLRSQILSIKSHCLKLEENIKVAEEQGELAFQDAKDKLAQLEAALQKAKQDMARQLREYQDLMNTKLALDIEIATYRKLVEGEESRMDLPSATVVSAVQSRCRTTASKSGLSKTPSRKKKNRRGPVIKITEMSEKYLSQESEASE", "length": 452 }, "evidence": [ { "id": "A0A286ZL11", "url": "https://omabrowser.org/oma/group/A0A286ZL11/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0VBK2-1", "protein_name": "Keratin, type II cytoskeletal 80", "gene_name": "Krt80", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAYRSCVVGFSSLSGCEMTPAGSPQPGTSGWGSCGLPGPGFSSRSLTSCRPAGTIPKVTVNPSLLVPLDLKVDPAVQQQKNQEKEEMKALNDKFASLIGKVQALEQRNQLLETRWSFLQGQGSATFDLSHHYETFQGRLQEELRKVSQERGQLEANLLQVLEKVEEFRVRYEDEISKRTDLEFTFVQLKKDLDAECLRRTELETKLKGLQGFLELMRTVYEQELKDLTAQVKDVSVTVGLDSRCHIDLSGIVEEVKAQYDAIAARSLEEAEAYSRSQLEERAARSAEFGNSLQSSRCEIADLNVRIQKLRSQIVSVKSHCLKLEENIKVAEEQGELAFQDAKDKMAQLENALQKAKQDMARQLREYQDLMNTKLALDIEIATYHKLMEGEESRMDLPSATVVSTVKSGCRTTASKSGLTKTSSRKKKNRRGPVIKITEMSEKYLSQESEASE", "length": 452 }, "evidence": [ { "id": "A0A286ZL11", "url": "https://omabrowser.org/oma/group/A0A286ZL11/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6IMF1-1", "protein_name": "Keratin, type II cytoskeletal 80", "gene_name": "Krt80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAYRSCVVGFSSHSGCEVTPAGSSQPGTSGWGSCGLPGPGFSSRSLTSCRPAGVIPKVTVNPSLLVPLDLKVDPAVQQQKNQEKEEMKVLNDKFASLIGKVQALEQRNQLLETRWGFLQGQGSATFDLSHHYETFQGRLQEELRKVSQERGQLEASLLQVLEKVEEFRVRYEDEISKRTDLEFTFVQLKKDLDAECLRRTELETKLKGLQGFVELMRTVYEQELKDLTAQVKDVSVTVGLDSRCHIDLSGIVEEVKAQYDAIAARSLEEAEAYSRSQLEERAARSAEFGNSLQSSRCEIADLNVRIQKLRSQIVSVKSHCLKLEENIKVAEEQGELAFQDAKDKMAQLEAALQKAKQDMARQLREYQDLMNTKLALDIEIATYHKLMEGEESRMDLPSTTVVSAVQSRCRTTASKSGLSKTPSRKKKNRGGPVIKITEMSEKYLSQESEASE", "length": 452 }, "evidence": [ { "id": "A0A286ZL11", "url": "https://omabrowser.org/oma/group/A0A286ZL11/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6KB66-1", "protein_name": "Keratin, type II cytoskeletal 80", "gene_name": "KRT80", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MACRSCVVGFSSLSSCEVTPVGSPRPGTSGWDSCRAPGPGFSSRSLTGCWSAGTISKVTVNPGLLVPLDVKLDPAVQQLKNQEKEEMKALNDKFASLIGKVQALEQRNQLLETRWSFLQGQDSAIFDLGHLYEEYQGRLQEELRKVSQERGQLEANLLQVLEKVEEFRIRYEDEISKRTDMEFTFVQLKKDLDAECLHRTELETKLKSLESFVELMKTIYEQELKDLAAQVKDVSVTVGMDSRCHIDLSGIVEEVKAQYDAVAARSLEEAEAYSRSQLEEQAARSAEYGSSLQSSRSEIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQDMARQLRKYQELMNVKLALDIEIATYRKLVEGEEGRMDSPSATVVSAVQSRCKTAASRSGLSKAPSRKKKGSKGPVIKITEMSEKYFSQESEVSE", "length": 452 }, "evidence": [ { "id": "A0A286ZL11", "url": "https://omabrowser.org/oma/group/A0A286ZL11/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "keratinization", "id": "GO:0031424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031424", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11" } ], "pmid": "" }, { "name": "intermediate filament organization", "id": "GO:0045109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045109", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "keratin filament", "id": "GO:0045095", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045095", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of skin epidermis", "id": "GO:0030280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030280", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZL11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL11" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 61, "end_pos": 63, "annotation": "n_glycosylation_sequon" } ], 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"biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZLB0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 98, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZLB0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZLB0" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 67, "end_pos": 69 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZLD6-1", "uniprot_ac": "A0A286ZLD6", "uniprot_id": "A0A286ZLD6_PIG", "mass": { "chemical_mass": 113572.0, "monoisotopic_mass": 113572.0 }, "refseq": { "ac": "XP_020925557", "name": "probable guanine nucleotide exchange factor MCF2L2 isoform X6", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925557" }, "gene_names": [ { "name": "MCF2L2", "type": "recommended", "evidence": [ { "id": "A0A286ZLD6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6" } ] }, { "name": "MCF2L2", "type": "synonym", "evidence": [ { "id": "XP_020925557", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925557" } ] } ], "protein_names": [ { "name": "MCF.2 cell line derived transforming sequence-like 2", "type": "synonym", "evidence": [ { "id": "A0A286ZLD6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6/entry#names_and_taxonomy" } ] }, { "name": "probable guanine nucleotide exchange factor MCF2L2 isoform X6", "type": "synonym", "evidence": [ { "id": "XP_020925557", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925557" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLD6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MCF2L2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6", "locus": { "chromosome": "13", "start_pos": 121132948, "end_pos": 121378371, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021749", "url": "https://www.ensembl.org/id/ENSSSCG00000021749" } ] } } ], "crossref": [ { "id": "A0A286ZLD6", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZLD6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021749", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021749", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00170", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00170", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00176", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00176", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624866", "url": "https://www.ncbi.nlm.nih.gov/gene/100624866", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001251", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001251", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018159", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018159", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035899", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035899", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051336", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051336", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055251", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055251", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056466", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056466", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KGIVFCK", "url": "https://omabrowser.org/oma/group/KGIVFCK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22826", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22826", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22826:SF201", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22826:SF201", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00621", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00621", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13716", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13716", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22697", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22697", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23289", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23289", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020925557", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925557", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZLD6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLD6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLFWLKEEMAPQEFTRRLATVITHVDEIMQQEIRPLVAVDIIEQLHRQFAILSGGRGKDGAPIITFPEFVGFKHIPEEDFLNVMTYLTSVPSVEAASIGFVIIIDRRRDKWSSVKASLTRIAVAFPGNLQLIFILRPSRFIQRTFTDIGIKYYRDEFKMKVPIVMLNSVSDLHGYIDKSQLTEDLGGTLEYRHSQWINHRTAIENFALALKTTAQMLRTFGDCLATTELPRSVPSTEDLLMSHTKQRDKMQDELKLLGKQGATLLSCIREPATKSPTSKLNLNELDNVATMKRLLVQLDETEKAFSQFWSEHHLKLNQCLQLQHFEQNFCEVKLALGNLLAEQAECTDIGDSVTRVEQLLKEHKKLEGEGQEPLEKAQLLAVIGDQLIQNHHYAVDSIRPRCAELRHLCDDFINENKKKCDILEKSLELHRQLDKVSQWCEAGIYLLASQAVDKCHSREGVDIALNDIETFLGTVKEYQLPSPKEFYNQFELMLTLDVKVKAQKVLQKLSDVQEIFHKRQMSLMKLAARQTRPVQPVAPHPESSPKWVSPKISQPSTLAPCQKTLEEPYVETDLNSLEKEDDETKFEVKNEEIPESSHDGENPEPEQLEGSKNLSPSRRIIRDLLETEETYIKEIKNIIDGYILPMDFIWLKHLIPDVLQNNKDFLFGNIRELYEFHNRIFLKELEKCTENPELLARCFLKRKEDLQMYFKYHKNLPRARAIWQECQDCTYFGVCQRQLGHSLPLFKYLRGPSQRLIKYQMLLKGLLDFESPADLEVDPGELEGCSAKNGPKRMKDSAFSAELQQALAMMEDLIKSCELAVDLAAVTGCPDDIRKLGKVLMYGSFNVWAVHKDRYKMKDLIRFKPSQRQIYLFERGIVFCKIRMEPSDQGLSPHYIFKKSLKLMSLSIHQLGRGSSRKFEIANQNGLEKYILQAASKEIRDCWFSEISKLLMEQQNNTKDVYEDEDNGRQISSKSLGTFPFGRQL", "length": 985, "header": "tr|A0A286ZLD6-1|A0A286ZLD6_PIG Isoform 1 of MCF.2 cell line derived transforming sequence-like 2 OS=Sus scrofa OX=9823 GN=MCF2L2 PE=3 SV=3 CANONICAL=A0A286ZLD6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLD6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6/entry#A0A286ZLD6-1", "sequence": { "sequence": "MLFWLKEEMAPQEFTRRLATVITHVDEIMQQEIRPLVAVDIIEQLHRQFAILSGGRGKDGAPIITFPEFVGFKHIPEEDFLNVMTYLTSVPSVEAASIGFVIIIDRRRDKWSSVKASLTRIAVAFPGNLQLIFILRPSRFIQRTFTDIGIKYYRDEFKMKVPIVMLNSVSDLHGYIDKSQLTEDLGGTLEYRHSQWINHRTAIENFALALKTTAQMLRTFGDCLATTELPRSVPSTEDLLMSHTKQRDKMQDELKLLGKQGATLLSCIREPATKSPTSKLNLNELDNVATMKRLLVQLDETEKAFSQFWSEHHLKLNQCLQLQHFEQNFCEVKLALGNLLAEQAECTDIGDSVTRVEQLLKEHKKLEGEGQEPLEKAQLLAVIGDQLIQNHHYAVDSIRPRCAELRHLCDDFINENKKKCDILEKSLELHRQLDKVSQWCEAGIYLLASQAVDKCHSREGVDIALNDIETFLGTVKEYQLPSPKEFYNQFELMLTLDVKVKAQKVLQKLSDVQEIFHKRQMSLMKLAARQTRPVQPVAPHPESSPKWVSPKISQPSTLAPCQKTLEEPYVETDLNSLEKEDDETKFEVKNEEIPESSHDGENPEPEQLEGSKNLSPSRRIIRDLLETEETYIKEIKNIIDGYILPMDFIWLKHLIPDVLQNNKDFLFGNIRELYEFHNRIFLKELEKCTENPELLARCFLKRKEDLQMYFKYHKNLPRARAIWQECQDCTYFGVCQRQLGHSLPLFKYLRGPSQRLIKYQMLLKGLLDFESPADLEVDPGELEGCSAKNGPKRMKDSAFSAELQQALAMMEDLIKSCELAVDLAAVTGCPDDIRKLGKVLMYGSFNVWAVHKDRYKMKDLIRFKPSQRQIYLFERGIVFCKIRMEPSDQGLSPHYIFKKSLKLMSLSIHQLGRGSSRKFEIANQNGLEKYILQAASKEIRDCWFSEISKLLMEQQNNTKDVYEDEDNGRQISSKSLGTFPFGRQL", "length": 985, "header": "tr|A0A286ZLD6-1|A0A286ZLD6_PIG Isoform 1 of MCF.2 cell line derived transforming sequence-like 2 OS=Sus scrofa OX=9823 GN=MCF2L2 PE=3 SV=3 CANONICAL=A0A286ZLD6-1" }, "locus": { "chromosome": "13", "start_pos": 121377846, "end_pos": 121136068, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058614.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058614.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032424.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032424.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLD6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLD6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YNZ2-1", "protein_name": "MCF.2 cell line derived transforming sequence-like 2", "gene_name": "MCF2L2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASRCRKCGQQVPRNLPFTAVRITEGEMKSYHDFIGGCIRLECMAKKDEIMQQEIRPLVAVDIIEQLHRQFAILSGGRGKDGAPIITFPEFAGFSEIPDEDFLNVVTYLTSIPSLEAASIGFIIIIDRRRDKWSAVKASLTRIAGAFPGNLQLVFVLRPSRFIQRAIADIGIKLYRDDFKMKVPIIMLNSVSDLHGYIDKCQLTRELGGTLEYGHSQWIHHRTAIENFAMTVKTTAQMLQTFGTDLAETELPNDVQCTEELLSAHTDHHSKLKDELKLAVKQGATLLTCIREPVTRSANSKLSPDELENVATVERLLAQLDETEKAFDQFWTKHHLKLEQCLQLRHFEHDFREVKLTLDNLMEAQAGFSDVGDSVTRVEHLLREQKQLEEKGQEPLEKAQTLALHGEQLIQNNHYAVDSIRPKCVELRRICDDFTNETKKKYDILGKSLELHKQLDKASQWCEAGIYLLASQAVDKCQSQEGAETALVEIEKFLATAKEHQLSNPKEFYNQFDTILTPEIKANAQRILQKLEDVQEMFDKRQVSLKKLAAKQTRPVQPVAPHPESSPKRASPKTTRPAGVATNRRSAEITCPPKSISEAELSKKKSIKKTKGGIKIEVMHEASQGGSSRVLVMSESDENLSTRRSHIINELIETERVYVEELQSIIEGYASEMDNPSLLHLIPSVLQNKKDILFGNLPEIYEFHNRIFLKELENCIENPELLARCFLKRKEDLQIYEKYCQNKPRSEALWRQCGDSIFFQECQRKLDHKLSLDAYLLKPVQRITKYQLLLKEMLKCSKNSEGTAELEEALATVLDIIKSVNDSMHQIAITGYEGDVSELGKLLMQGSFNVWTDHKKGHNKVKDLARFKPMQRHLFLYTKMLLFCKKREENTDGHEKTASYSFKNSLKMSTVGITENVKGDNKKFEIWYNGREEVYIIQASSVELKNTWISEIRKVLTGQLEACREASQLHQRITESVYHAPMNSSNITRYSRKSSSIYENKSETSNVEASNNKNRNSSPSARQKRVDASTSLNLERTALARKRFTLQGLSNRRAPPKDPESKEREVARRFSLASSISTTVNASAVTKGPLVPAVKVKRHEIKSDPTPLGFEDAFENTILAQTKCSTGSTTRPVPRSASQTGWPSRQMPSLDTFEDFEAIPSSMDELSNSSDMEEETNPNNGTNLFRVEGSFDSCFPDSLTLEDGDLVQFVQEGENGQWLVKKLVSEKSEWVPSSILQPAEGDTNNIIKNSNADMYNDSCSTASVESDTKESEVAKSFPAEQRAGS", "length": 1285 }, "evidence": [ { "id": "A0A286ZLD6", "url": "https://omabrowser.org/oma/group/A0A286ZLD6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MQ44-1", "protein_name": "MCF.2 cell line derived transforming sequence-like 2", "gene_name": "MCF2L2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLFWLKEEMAPQEFTRRLATVITHVDEIMQQEIRPLVAVDIIEQLHRQFAILSGGRGKDGAPIITFPEFVGFKHIPDEDFLNVMTYLTSVPSMEAASIGFVIVIDRRRDKWSSIKASLTRIAVAFPGNLQLILILRPSRFIQRTFTDIGIKYYRDEFKMKVPIVMLNSVSDLHDYIDKSQLTADLGGTLEYRHSQWINHRTAIENFALALKTTAQMLQTFGACLATTELPRSIPSTEDLLMSHMRQWNKLQDELKLLGKQGATLLSCMQEPATKSPTSKLSLHEVENVATMERLLVQLDETQKAFIQFWSEHHLKLNQYLQLQHFEHSFCEVKLALDNLLAEQAEFSDIGDSVMHVEQLLKEHKKLEGEGQESLEKAQLLAVIGDQLIQSHHYAVDSIRPRCAELRHLCDDFINENKKKHDILEKSLELHRRLDKVSQWCEAGVYLLASQAVDKYQSREGIDIALNDIETFLGTAKEYQLPSSKDFYNQYELMLTLDIKTKAQKVLQKLSDVQEIFHKRQMSLMKLAARQTRPVQPVAPHPESSPKWASPKISQPSTLVPHQKTSEEPYTETDLNSEEKEDDETKSEVKNEEILESSHDADNPEPEQPDGSKNLSHSRHIIRDLVETEVTYIKEIKNIIDGYIIPMDFIWLKHLIPDVLRNNKEFLFGNIRELYEFHSRTFLKELEKCTENPELLARCFLKRKEDLQIYFKYHKNLPRARAIWQECQDCTYFGVCQRQLGHSLPLFKCLREPSQRLIKYQMLLKGLLDFESPEDLEMDPSDLEGGSAKNGPKRTKDSTFLADLQQALAMMEDLIKSCELAMDLAAVTGCPDDIGKFGKLLMHGSFNVWTVHKDRYKMKDLIRFKPSQRQIYLFEREIMFCKIQLEPSDQGLSPHYSFKKSMKLMTLSIRQLGRGSNRKFEIANQNGLEKYILQAASKEIRDCWFSEISKLLMKQQNNIKDVYEDEDNGRQISLKRCSSREFISMETSVNCEGAEDLEKENSVLSLSGLFRLDDSYETSTSGQEKGESIRGEKKGCQKKDTATNKTEESLETSTGLLAPAGKASFPRAEAVRAEAVRAQEGSLRPPSAEN", "length": 1089 }, "evidence": [ { "id": "A0A286ZLD6", "url": "https://omabrowser.org/oma/group/A0A286ZLD6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q86YR7-1", "protein_name": "Probable guanine nucleotide exchange factor MCF2L2", "gene_name": "MCF2L2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"A0A286ZLF0_PIG", "mass": { "chemical_mass": 96703.0, "monoisotopic_mass": 96703.0 }, "refseq": { "ac": "XP_020940139", "name": "dimethylglycine dehydrogenase, mitochondrial isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940139" }, "gene_names": [ { "name": "DMGDH", "type": "recommended", "evidence": [ { "id": "A0A286ZLF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0" } ] }, { "name": "DMGDH", "type": "synonym", "evidence": [ { "id": "XP_020940139", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940139" } ] } ], "protein_names": [ { "name": "Dimethylglycine dehydrogenase, mitochondrial", "type": "recommended", "evidence": [ { "id": "A0A286ZLF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#names_and_taxonomy" } ] }, { "name": "1.5.8.4", "type": "synonym", "evidence": [ { "id": "A0A286ZLF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#names_and_taxonomy" } ] }, { "name": "ME2GLYDH", "type": "synonym", "evidence": [ { "id": "A0A286ZLF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#names_and_taxonomy" } ] }, { "name": "dimethylglycine dehydrogenase, mitochondrial isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020940139", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940139" } ] } ], "function": [ { "annotation": "Catalyzes the demethylation of N,N-dimethylglycine to sarcosine. Also has activity with sarcosine in vitro.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLF0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0#function" }, { "database": "UniProtKB", "id": "ARBA00055666", "url": "https://www.uniprot.org/uniprotkb/ARBA00055666#function" }, { "database": "UniProtKB", "id": "A0A287AN11", "url": "https://www.uniprot.org/uniprotkb/A0A287AN11#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLF0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DMGDH", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0", "locus": { "chromosome": "2", "start_pos": 87791943, "end_pos": 87866679, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014110", "url": "https://www.ensembl.org/id/ENSSSCG00000014110" } ] } } ], "crossref": [ { "id": "A0A286ZLF0", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZLF0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000014110", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014110", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525563", "url": "https://www.ncbi.nlm.nih.gov/gene/100525563", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006076", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006076", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006222", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006222", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013977", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013977", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027266", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027266", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028896", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028896", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032503", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032503", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036188", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036188", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525563", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525563", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZLF0", "url": "https://www.orthodb.org/?gene=A0A286ZLF0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43757", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43757", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43757:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43757:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01266", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01266", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01571", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01571", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08669", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08669", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16350", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16350", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6798163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020940139", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940139", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "52856", "url": "https://www.rhea-db.org/rhea/52856", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZLF0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZP70", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP70", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZP70-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP70-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AN11", "url": "https://www.uniprot.org/uniprotkb/A0A287AN11", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AN11-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AN11-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCH8", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BCH8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BCH8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BMY4", "url": "https://www.uniprot.org/uniprotkb/A0A287BMY4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BMY4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BMY4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RF50", "url": "https://www.uniprot.org/uniprotkb/F1RF50", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RF50-1", "url": "https://www.uniprot.org/uniprotkb/F1RF50-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFRPGAQRLRGLQLRSFPLRGSPGRPRSVCAREGEENAPLSAETRWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSIRIATTPVRVDEFKYQMTRTGWHATEQYIIGPEKIQEMFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPAPVTSLKPRSDGTWDVETPQGSMRANRIVNAAGFWAREVGQMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQDSWVTSGVPPGFGKELFESDLDRIMEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRISGLYKTLKSKCSMGFHAGWEQPHWFYKPDQDPGYRPSFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFTVKGQDSVRLLDHLFANVIPQVGCTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELSKVGQQVEVELLGKNYPATVIQEPLVLTEPTRNRLQKKGGKDKI", "length": 866, "header": "tr|A0A286ZLF0-1|A0A286ZLF0_PIG Isoform 1 of Dimethylglycine dehydrogenase, mitochondrial OS=Sus scrofa OX=9823 GN=DMGDH PE=1 SV=2 CANONICAL=A0A286ZLF0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#A0A286ZLF0-1", "sequence": { "sequence": "MFRPGAQRLRGLQLRSFPLRGSPGRPRSVCAREGEENAPLSAETRWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSIRIATTPVRVDEFKYQMTRTGWHATEQYIIGPEKIQEMFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPAPVTSLKPRSDGTWDVETPQGSMRANRIVNAAGFWAREVGQMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQDSWVTSGVPPGFGKELFESDLDRIMEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRISGLYKTLKSKCSMGFHAGWEQPHWFYKPDQDPGYRPSFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFTVKGQDSVRLLDHLFANVIPQVGCTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELSKVGQQVEVELLGKNYPATVIQEPLVLTEPTRNRLQKKGGKDKI", "length": 866, "header": "tr|A0A286ZLF0-1|A0A286ZLF0_PIG Isoform 1 of Dimethylglycine dehydrogenase, mitochondrial OS=Sus scrofa OX=9823 GN=DMGDH PE=1 SV=2 CANONICAL=A0A286ZLF0-1" }, "locus": { "chromosome": "2", "start_pos": 87866462, "end_pos": 87792957, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056871.2", "url": "https://www.ensembl.org/id/ENSSSCT00000056871.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032396.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032396.2" } ] } }, { "isoform_ac": "A0A286ZP70-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#A0A286ZP70-1", "sequence": { "sequence": "MFRPGAQRLRGLQLRSFPLRGSPGRPRSVCAREGEENAPLSAETRWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSIRIATTPVRVDEFKYQMTRTGWHATEQYIIGPEKIQEMFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPAPVTSLKPRSDGTWDVETPQGSMRANRIVNAAGFWAREVGQMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQDSWVTSGVPPGFGKELFESDLDRIMEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRISGLYKTLKSKCSMGFHAGWEQPHWFYKPDQDPGYRPSFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFTVKGQDSVRLLDHLFANVIPQVGCTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVSVEDPTARAAAAGPRHKLSSLFPFTVGC", "length": 804, "header": "tr|A0A286ZP70-1|A0A286ZP70_PIG Computationally mapped isoform of Dimethylglycine dehydrogenase OS=Sus scrofa OX=9823 GN=DMGDH PE=1 SV=2 CANONICAL=A0A286ZLF0-1" }, "locus": { "chromosome": "2", "start_pos": 87866462, "end_pos": 87799903, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049916.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049916.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033390.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033390.2" } ] } }, { "isoform_ac": "A0A287AN11-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#A0A287AN11-1", "sequence": { "sequence": "MFVGWLSTLFIWILKTVRSLTGVHIGADMFSSRRTGWYFLVSCQQQMTSSQINYQHFENVKFFCLVFPFLLTLKAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSIRIATTPVRVDEFKYQMTRTGWHATEQYIIGPEKIQEMFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPAPVTSLKPRSDGTWDVETPQGSMRANRIVNAAGFWAREVGQMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQDSWVTSGVPPGFGKELFESDLDRIMEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRISGLYKTLKSKCSMGFHAGWEQPHWFYKPDQDPGYRPSFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFTVKGQDSVRLLDHLFANVIPQVGCTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELSKVGQQVEVELLGKNYPATVIQEPLVLTEPTRNRLQKKGGKDKI", "length": 848, "header": "tr|A0A287AN11-1|A0A287AN11_PIG Computationally mapped isoform of Dimethylglycine dehydrogenase, mitochondrial OS=Sus scrofa OX=9823 GN=DMGDH PE=1 SV=1 CANONICAL=A0A286ZLF0-1" }, "locus": { "chromosome": "2", "start_pos": 87859616, "end_pos": 87792957, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040659.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040659.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045313.1", "url": "https://www.ensembl.org/id/ENSSSCP00000045313.1" } ] } }, { "isoform_ac": "A0A287BCH8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#A0A287BCH8-1", "sequence": { "sequence": "MFRPGAQRLRGLQLRSFPLRGSPGRPRSVCAREGEENAPLSAETRWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSIRIATTPVRVDEFKYQMTRTGWHATEQYIIGPEKIQEMFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPAPVTSLKPRSDGTWDVETPQGSMRANRIVNAAGFWAREVGQMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQDSWVTSGVPPGFGKELFESDLDRIMEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRISGLYKTLKSKCSMGFHAGWEQPHWFYKPDQDPGYRPSFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFTVKGQDSVRLLDHLFANVIPQVGCTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKLAASYVSIGETTLLDSELPFKKQKLRGK", "length": 823, "header": "tr|A0A287BCH8-1|A0A287BCH8_PIG Computationally mapped isoform of Dimethylglycine dehydrogenase OS=Sus scrofa OX=9823 GN=DMGDH PE=1 SV=2 CANONICAL=A0A286ZLF0-1" }, "locus": { "chromosome": "2", "start_pos": 87866462, "end_pos": 87799827, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051076.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051076.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053800.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053800.2" } ] } }, { "isoform_ac": "A0A287BMY4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#A0A287BMY4-1", "sequence": { "sequence": "MFRPGAQRLRGLQLRSFPLRGSPGRPRSVCAREGEENAPLSAETRWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSELTAGSTWHAVVGFHQPGSIRIATTPVRVDEFKYQMTRTGWHATEQYIIGPEKIQEMFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPAPVTSLKPRSDGTWDVETPQGSMRANRIVNAAGFWAREVGQMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQDSWVTSGVPPGFGKELFESDLDRIMEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRISGLYKTLKSKCSMGFHAGWEQPHWFYKPDQDPGYRPSFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFTVKGQDSVRLLDHLFANVIPQVGCTNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELSKVGQQVEVELLGKNYPATVIQEPLVLTEPTRNRLQKKGGKDKI", "length": 780, "header": "tr|A0A287BMY4-1|A0A287BMY4_PIG Computationally mapped isoform of Dimethylglycine dehydrogenase OS=Sus scrofa OX=9823 GN=DMGDH PE=1 SV=3 CANONICAL=A0A286ZLF0-1" }, "locus": { "chromosome": "2", "start_pos": 87866462, "end_pos": 87792957, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037929.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037929.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057866.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057866.3" } ] } }, { "isoform_ac": "F1RF50-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLF0/entry#F1RF50-1", "sequence": { "sequence": "MFRPGAQRLRGLQLRSFPLRGSPGRPRSVCAREGEENAPLSAETRWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSIRIATTPVRVDEFKYQMTRTGWHATEQYIIGPEKIQEMFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPAPVTSLKPRSDGTWDVETPQGSMRANRIVNAAGFWAREVGQMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQDSWVTSGVPPGFGKELFESDLDRIMEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRYGKWTTTQYTEAKARESYGFNNIVGYPKEERFAGRPTQRISGLYKTLKSKCSMGFHAGWEQPHWFYKPDQDPGYRWIEEEAVTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWELYHRREDSAALYDIIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPADFIGKQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYDGKVVGNTTSGSYSYSIQKSLAFAYVPVELSKVGQQVEVELLGKNYPATVIQEPLVLTEPTRNRLQKKGGKDKI", "length": 767, "header": "tr|F1RF50-1|F1RF50_PIG Computationally mapped isoform of Dimethylglycine dehydrogenase OS=Sus scrofa OX=9823 GN=DMGDH PE=1 SV=3 CANONICAL=A0A286ZLF0-1" }, "locus": { "chromosome": "2", "start_pos": 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7#function" }, { "database": "UniProtKB", "id": "ARBA00045441", "url": "https://www.uniprot.org/uniprotkb/ARBA00045441#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10732", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10732:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10732:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00833", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00833", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZLG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRVHTKTVKKAARVIIEKYYTRLGNDFHTNKCVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPARGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQATVGMNFKTPRGAV", "length": 135, "header": "tr|A0A286ZLG7-1|A0A286ZLG7_PIG Isoform 1 of Small ribosomal subunit protein eS17 OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A286ZLG7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7/entry#A0A286ZLG7-1", "sequence": { "sequence": "MGRVHTKTVKKAARVIIEKYYTRLGNDFHTNKCVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPARGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQATVGMNFKTPRGAV", "length": 135, "header": "tr|A0A286ZLG7-1|A0A286ZLG7_PIG Isoform 1 of Small ribosomal subunit protein eS17 OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A286ZLG7-1" }, "locus": { "chromosome": "15", "start_pos": 107938553, "end_pos": 107938149, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097024.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097024.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077817.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077817.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q9SQZ1-1", "protein_name": "Small ribosomal subunit protein eS17x", "gene_name": "RPS17C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAPAVFGRPAGRYQR", "length": 140 }, "evidence": [ { "id": "A0A286ZLG7", "url": "https://omabrowser.org/oma/group/A0A286ZLG7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "translation", "id": "GO:0006412", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006412", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of ribosome", "id": "GO:0003735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003735", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosolic small ribosomal subunit", "id": "GO:0022627", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022627", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLG7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZLG7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 135, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZLG7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZLG7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZLH6-1", "uniprot_ac": "A0A286ZLH6", "uniprot_id": "A0A286ZLH6_PIG", "mass": { "chemical_mass": 70581.0, "monoisotopic_mass": 70581.0 }, "refseq": {}, "gene_names": [ { "name": "AVL9", "type": "recommended", "evidence": [ { "id": "A0A286ZLH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6" } ] } ], "protein_names": [ { "name": "AVL9 cell migration associated", "type": "synonym", "evidence": [ { "id": "A0A286ZLH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLH6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AVL9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6", "locus": { "chromosome": "18", "start_pos": 40663730, "end_pos": 40739080, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023445", "url": "https://www.ensembl.org/id/ENSSSCG00000023445" } ] } } ], "crossref": [ { "id": "A0A286ZLH6", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZLH6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023445", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023445", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR012860", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012860", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018307", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018307", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051731", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051731", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR31017", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31017", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31017:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31017:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07792", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07792", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09794", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09794", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZLH6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLH6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAY6", "url": "https://www.uniprot.org/uniprotkb/A0A287BAY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAY6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAY6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BTE6", "url": "https://www.uniprot.org/uniprotkb/A0A287BTE6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BTE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BTE6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBH1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBH1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKAGWRGDGVPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVFFHLPPRSGNGATVYGISCYRQIEAKALKVRQADITRETVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGTSLEGSQVYLGLSPRDLVLHFRHKVLFYISPVNKLVGALMTVLSLFPGMIEHGLRDCSQYRPRKSMSEDVGLQENNPPADDFVSMPASDISNTNLGTFKKSMTGNHGGDIAFKTEEPLVRAEDDSSEGQELSDSNQYLKPPSRPSPESSESDWETLDPSVLEDSSLKEREQAGSEQINSFPKDSLPSDSPPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHLLSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADYLVRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKMLSDYGTTFVMAWKNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTTSRNVVQTGKAVGQSVGGAFSSAKTAMSSWLSAFTNSTPQSLTELPDGKP", "length": 636, "header": "tr|A0A286ZLH6-1|A0A286ZLH6_PIG Isoform 1 of AVL9 cell migration associated OS=Sus scrofa OX=9823 GN=AVL9 PE=3 SV=1 CANONICAL=A0A286ZLH6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLH6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6/entry#A0A286ZLH6-1", "sequence": { "sequence": "MEKAGWRGDGVPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVFFHLPPRSGNGATVYGISCYRQIEAKALKVRQADITRETVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGTSLEGSQVYLGLSPRDLVLHFRHKVLFYISPVNKLVGALMTVLSLFPGMIEHGLRDCSQYRPRKSMSEDVGLQENNPPADDFVSMPASDISNTNLGTFKKSMTGNHGGDIAFKTEEPLVRAEDDSSEGQELSDSNQYLKPPSRPSPESSESDWETLDPSVLEDSSLKEREQAGSEQINSFPKDSLPSDSPPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHLLSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADYLVRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKMLSDYGTTFVMAWKNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTTSRNVVQTGKAVGQSVGGAFSSAKTAMSSWLSAFTNSTPQSLTELPDGKP", "length": 636, "header": "tr|A0A286ZLH6-1|A0A286ZLH6_PIG Isoform 1 of AVL9 cell migration associated OS=Sus scrofa OX=9823 GN=AVL9 PE=3 SV=1 CANONICAL=A0A286ZLH6-1" }, "locus": { "chromosome": "18", "start_pos": 40738880, "end_pos": 40668851, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055803.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055803.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032421.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032421.1" } ] } }, { "isoform_ac": "A0A287BAY6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6/entry#A0A287BAY6-1", "sequence": { "sequence": "MVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVFFHLPPRSGNGATVYGISCYRQIEAKALKVRQADITRETVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGTSLEGSQVYLGLSPRDLVLHFRHKVLILFKLILLEKKVLFYISPVNKLVGALMTVLSLFPGMIEHGLRDCSQYRPRKSMSEDVGLQENNPPADDFVSMPASDISNTNLGTFKKSMTGNHGGDIAFKTEEPLVRAEDDSSEGQELSDSNQYLKPPSRPSPESSESDWETLDPSVLEDSSLKEREQAGSEQINSFPKDSLPSDSPPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHLLSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADYLVRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKMLSDYGTTFVMAWKNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTTSRNVVQTGKAVGQSVGGAFSSAKTAMSSWLSAFTNSTPQSLTELPDGKP", "length": 619, "header": "tr|A0A287BAY6-1|A0A287BAY6_PIG Computationally mapped isoform of AVL9 cell migration associated OS=Sus scrofa OX=9823 GN=AVL9 PE=3 SV=2 CANONICAL=A0A286ZLH6-1" }, "locus": { "chromosome": "18", "start_pos": 40713899, "end_pos": 40668851, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060396.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060396.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053502.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053502.3" } ] } }, { "isoform_ac": "A0A287BTE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6/entry#A0A287BTE6-1", "sequence": { "sequence": "MEKAGWRGDGVPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVFFHLPPRSGNGATVYGISCYRQIEAKPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGTSLEGSQVYLGLSPRDLVLHFRHKVLILFKLILLEKKVLFYISPVNKLVGALMTVLSLFPGMIEHGLRDCSQYRPRKSMSEDVGLQENNPPADDFVSMPASDISNTNLGTFKKSMTGNHGGDIAFKTEEPLVRAEDDSSEGQELSDSNQYLKPPSRPSPESSESDWETLDPSVLEDSSLKEREQAGSEQINSFPKDSLPSDSPPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHLLSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADYLVRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKMLSDYGTTFVMAWKNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTTSRNVVQTGKAVGQSVGGAFSSAKTAMSSWLSAFTNSTPQSLTELPDGKP", "length": 625, "header": "tr|A0A287BTE6-1|A0A287BTE6_PIG Computationally mapped isoform of AVL9 cell migration associated OS=Sus scrofa OX=9823 GN=AVL9 PE=3 SV=2 CANONICAL=A0A286ZLH6-1" }, "locus": { "chromosome": "18", "start_pos": 40738880, "end_pos": 40668851, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053149.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053149.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059486.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059486.2" } ] } }, { "isoform_ac": "A0A5G2RBH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLH6/entry#A0A5G2RBH1-1", "sequence": { "sequence": 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Classification" ] }, { "id": "PTHR21084:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21084:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15008", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15008", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020926408", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926408", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZLK8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLK8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLK8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLK8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQ22", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQ22-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ22-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGLSHAEMEGCRNLLGLLNNDEILALCDTITNRLVQPEDRQDAIRAILVYSQSVEELLKRRKVHREVIFKYLATQGVIIPPATEKHNLIQHAKDYWKKQLHWKLKETPEPVKTEDVRVFEQEKEDKKAEKIDFRRLGEEFCHWFFELLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYNTSEQNVIDYHGAEIVSLRLLSLVKEEYLFLSPNLDSHGLKCASSPHGLVMVGVAGTVHRGNTCLGIFEQIFGLIRCPFVENTWKIKFINLRIIGESSLAPGTLTKPAITLEPSDLEAFYDINSLCGPVKYDL", "length": 311, "header": "tr|A0A286ZQ22-1|A0A286ZQ22_PIG Isoform 1 of Chromosome 13 C3orf38 homolog OS=Sus scrofa OX=9823 GN=C13H3orf38 PE=4 SV=1 CANONICAL=A0A286ZQ22-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLK8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ22/entry#A0A286ZLK8-1", "sequence": { "sequence": "VEMSGLSHAEMEGCRNLLGLLNNDEILALCDTITNRLVQPEDRQDAIRAILVYSQSVEELLKRRKVHREVIFKYLATQGVIIPPATEKHNLIQHAKDYWKKQLHWKLKETPEPVKTEDVRVFEQQEKEDKKAEKIDFRRLGEEFCHWFFELLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYNTSEQNVIDYHGAEIVSLRLLSLVKEEYLFLSPNLDSHGLKCASSPHGLVMVGVAGTVHRGNTCLGIFEQIFGLIRCPFVENTWKIKFINLRIIGESSLAPGTLTKPAITLEPSDLEAFYDINSLCGSEVRLVRQALDSGTGDQAL", "length": 327, "header": "tr|A0A286ZLK8-1|A0A286ZQ22_PIG Computationally mapped isoform of Chromosome 13 C3orf38 homolog OS=Sus scrofa OX=9823 GN=C13H3orf38 PE=4 SV=1 CANONICAL=A0A286ZQ22-1" }, "locus": { "chromosome": "13", "start_pos": 167803357, "end_pos": 167797662, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039968.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039968.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032350.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032350.2" } ] } }, { "isoform_ac": "A0A286ZQ22-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ22/entry#A0A286ZQ22-1", "sequence": { "sequence": "MSGLSHAEMEGCRNLLGLLNNDEILALCDTITNRLVQPEDRQDAIRAILVYSQSVEELLKRRKVHREVIFKYLATQGVIIPPATEKHNLIQHAKDYWKKQLHWKLKETPEPVKTEDVRVFEQEKEDKKAEKIDFRRLGEEFCHWFFELLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYNTSEQNVIDYHGAEIVSLRLLSLVKEEYLFLSPNLDSHGLKCASSPHGLVMVGVAGTVHRGNTCLGIFEQIFGLIRCPFVENTWKIKFINLRIIGESSLAPGTLTKPAITLEPSDLEAFYDINSLCGPVKYDL", "length": 311, "header": "tr|A0A286ZQ22-1|A0A286ZQ22_PIG Isoform 1 of Chromosome 13 C3orf38 homolog OS=Sus scrofa OX=9823 GN=C13H3orf38 PE=4 SV=1 CANONICAL=A0A286ZQ22-1" }, "locus": { "chromosome": "13", "start_pos": 167803351, "end_pos": 167797703, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059044.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059044.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033567.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033567.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZLK8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLK8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E1C7U8-1", "protein_name": "Chromosome 3 open reading frame 38", "gene_name": "C3orf38", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASLGLSEREQAGCRQILELLETEELLALTDTVTNRLVHPENRQEAIQAILVYSQSAEELLKRRKVYREIIFKYLSGQGIAVPPSSEKHQLIACVREYWDRKLTSRVSQSGERTTHAEGHEKRQKSQDDVHNLGGEFCQWYFELLNSQHPLGVKSEETWGPQHFWENAKMKFCYNTVEKNVEDYDGAEMVSLRLLSLVKEEYLLFNPNLTADGLKCAMSRHGLVLVAVAGTVHRGNICLGIFEQIFGLIRCPVRGNTWKIKIVDLKIVGQDALEPGIQIEKPSIKYESNQLQEWYDGRELAVLEPHKY", "length": 308 }, "evidence": [ { "id": "A0A286ZQ22", "url": "https://omabrowser.org/oma/group/A0A286ZQ22/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q3TTL0-1", "protein_name": "Uncharacterized protein C3orf38 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGLSHLESEGCRNLLGLLDNDEIMALCDTVTNRLVQPVDRQDAIHAILVYSQNVEELLRRKKVHREVIFKYLAKQGVVVPPTAEKHNLIQYAKDYWAKQSPKLKDTAEPVTKTEDIQLFKQQAKEDKEAEKVDFRRLGEEFCHWFFELLNSQNPFLGPPQDDWGPQHFWHDAKLRFYYNTSEQNTTDYQGAEIVSLRLLSLVKEEFLFLSPNLDSQGLKCASSPHGLVMVGVAGTVHRGNSCLGIFEQIFGLIRSPFVENTWKIKFINLRIIGGSSLAPESVLKPSVTFEPSDLEAFYNVITLCNSPEVRPNVRQIIDSGTGDQVLHSGDEALLNKREMNLLTPLKH", "length": 348 }, "evidence": [ { "id": "A0A286ZQ22", "url": "https://omabrowser.org/oma/group/A0A286ZQ22/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5JPI3-1", "protein_name": "Uncharacterized protein C3orf38", "gene_name": "C3orf38", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEMSGLSFSEMEGCRNLLGLLDNDEIMALCDTVTNRLVQPQDRQDAVHAILAYSQSAEELLRRRKVHREVIFKYLATQGIVIPPATEKHNLIQHAKDYWQKQPQLKLKETPEPVTKTEDIHLFQQQVKEDKKAEKVDFRRLGEEFCHWFFGLLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYNTSEQNVMDYHGAEIVSLRLLSLVKEEFLFLSPNLDSHGLKCASSPHGLVMVGVAGTVHRGNTCLGIFEQIFGLIRCPFVENTWKIKFINLKIMGESSLAPGTLPKPSVKFEQSDLEAFYNVITVCGTNEVRHNVKQASDSGTGDQV", "length": 329 }, "evidence": [ { "id": "A0A286ZQ22", "url": "https://omabrowser.org/oma/group/A0A286ZQ22/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q66H33-1", "protein_name": "Uncharacterized protein C3orf38 homolog", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGLSHLESEGCRNLLGMLDNDEIMALCDTVTNRLVQPVDRQDAIRAILVYSQNVEELLRRKKVHREVIFKYLATQGVVVPPTTEKHGLIQYAKSYWEEQSPKLKETAEPVKKTEDIQLFEQQAKEDKEAEKVDFRRLGEEFCHWFFELLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYNTSEQNMTDYEGAEMVSLRLLSLVKEEFLFLSPNLDSQGLKCASSPHGLVMVGVAGTVHRGNSCLGIFEQIFGLIRSPFVENTWKIKFINLRIVGGSSLAPGSSLKPSVTFEQSDFEAFYNVITLCNTPEVRPNVRQILDSGTGDQVLCSGDEALLNKKEMNLPTPLKH", "length": 348 }, "evidence": [ { "id": "A0A286ZQ22", "url": "https://omabrowser.org/oma/group/A0A286ZQ22/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQ22", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ22" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of apoptotic process", "id": "GO:0043065", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043065", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQ22", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ22" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 179, "end_pos": 181, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZQ22-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 311, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZQ22-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZQ22" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": 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"MFPKGNLTVARWIWRSTRKLFLFLSLMLPHTAHLEGKKDHQFIWKPGPWGRCTGDCGPGGIQSRALWCFHFEGWTSHQSNCDESSRPPNERSCFRVCDWHRDLFQWEVSDWHHCMLVPPALGQARPRATECVTAQHGLQHRTVHCIQKLNRTMVVNEICEHFAPQPPTEQACLIPCPQDCVVSEFSQWSKCSKGCGKQLQHRTRSALAPPLYGGSQCPNLTESRACDTPISCPLGAEEYTFSLKVGPWHKCRLPHLKELNLNGRTVLDFISDSKERVTFRHHSYKAHHHSKPWDIEIGFQTRQVWCTRSDGKNALLSLCMQDPFPLTVRSCIIPKDCETTEWSSWSPCSKTCRSGSLSPGFRSRSRNVKHIAIGGGKDCPELLEKEACIVEGELLHPCPRYSWRTSEWKECQVSLLFEQQDAHWHATGPVCGGGIQTREVYCAQSTPAVTARRTKEVSRPVEKTLCLGPAPAASQLCNIPCSTDCIVSSWSAWGLCIHENCHDPQGRKGFRMRQRHVLMESTGPAGRCPHLVESVPCDDPLCYRWLTSEGICIPDHGKCGLGHRILKAVCQDERGEDVSGSLCPASPPPEQMACEIPCRMDCVLSEWTEWSSCSQSCSNKNSDGKQTRSRTILALAGEGGKPCPPSQALQEYRSCNDHSCMQLYWETSPWGPCSEDTLVTALNATIGSNGEATCGVGIQTRRVFCVKSHVGQVVTKRCPESTRPETVRPCLLPCKRDCTVTAFSEWTPCPRVCQPGNATIKQSRYRIIIQEAANGGQECPDTLFEERECEDVSLCPTYRWKAQKWSPCILVPESVRQETMVTGEACGKGVQTRAVSCISDNNQSAEMTECLKQTNGMPPLVQECTVPCHDDCTFTAWSKFTPCSRNCETTRSRRRQLTGKSRKKEKCQDADLYPLVETEPCPCDVFISHPYGNWSDCILPEGRREPPRGLRVQGDNKECGEGTRFRAIACSDKNGRPVDPAHCNSSGYMQEECVIPCPFDCKLSDWSSWGSCSSSCGIGVRIRSKWLKEKPYNGGRPCPKLDLKNQGQVHEAVPCYRECNQYSWVVEHWSPCKIHNELRSLRCGEGTQSRKIRCVNTADGEGGAVDNNLCNQDEIPPETQSCFLLCPNECVMSEWGPWSKCPQSCDPHTMQRRTRHLLRPSLSSRTCAEDSQVRPCLLNENCFQWSACQLSENATCGQGIRTRLLSCVRSDGKPVGMDQCKQHNLEKPQRMSAPCLVECMVNCQLSGWTAWTACSQTCGHGGRMSRTRFIITPTQGEGRPCPTELTQQKSCPVTPCYSWVLSNWSACKLEGGDCGEGVQIRSISCVVHNGSTSHWTVHVDDALCGERPFQDSLLKQPCSVPCPGDCHLTEWSEWSTCELTCIDGRSFETLGRQSRSRTFIIQSFENQDNCPQVLETRPCTGGKCYHYTWKASLWNNNERTVWCQRSDGINVTGGCSPQARPAAIRQCNPACRKPFSYCTQGGVCGCEKGYTEIMRSNGFLDYCMKVPGSEDKKADVKNLTGKNRPVNSKIHDIFKGWSLQPFDPGGGFLIMIFLVFTSYLVCKKPKAHQSTPPQQKPLTLAYDGDLDM", "length": 1588, "header": "tr|A0A286ZM32-1|A0A286ZM32_PIG Isoform 1 of Thrombospondin type-1 domain-containing protein 7B OS=Sus scrofa OX=9823 GN=THSD7B PE=4 SV=2 CANONICAL=A0A286ZM32-1" }, "locus": { "chromosome": "15", "start_pos": 14901376, "end_pos": 14090110, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049416.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049416.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032527.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032527.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1274, "start_aa": "Thr", "end_pos": 1274, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1274", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM32" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5173214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5173214", "resource": "Reactome", "description": "O-glycosylation of TSR domain-containing proteins" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM32" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "actin cytoskeleton organization", "id": "GO:0030036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030036", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM32" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1193, "end_pos": 1195, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1303, "end_pos": 1305, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1329, "end_pos": 1331, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1450, "end_pos": 1452, "annotation": "n_glycosylation_sequon" }, { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1518, "end_pos": 1520, "annotation": "n_glycosylation_sequon" }, { "start_pos": 219, "end_pos": 221, "annotation": "n_glycosylation_sequon" }, { "start_pos": 683, "end_pos": 685, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6, "end_pos": 8, "annotation": "n_glycosylation_sequon" }, { "start_pos": 757, "end_pos": 759, "annotation": "n_glycosylation_sequon" }, { "start_pos": 842, "end_pos": 844, "annotation": "n_glycosylation_sequon" }, { "start_pos": 933, "end_pos": 935, "annotation": "n_glycosylation_sequon" }, { "start_pos": 984, "end_pos": 986, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZM32", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM32" }, { "id": "PF19028", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19028" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Spondin-like TSP1", "eco_id": "ECO_0000259", "start_pos": 180, "end_pos": 229, "start_aa": "Cys", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZM32", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM32" }, { "id": "PF23308", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23308" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Thrombospondin type-1", "eco_id": "ECO_0000259", "start_pos": 1469, "end_pos": 1508, "start_aa": "Pro", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1274 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1193, "end_pos": 1195 }, { "start_pos": 1303, "end_pos": 1305 }, { "start_pos": 1329, "end_pos": 1331 }, { "start_pos": 1450, "end_pos": 1452 }, { "start_pos": 150, "end_pos": 152 }, { "start_pos": 1518, "end_pos": 1520 }, { "start_pos": 219, "end_pos": 221 }, { "start_pos": 683, "end_pos": 685 }, { "start_pos": 6, "end_pos": 8 }, { "start_pos": 757, "end_pos": 759 }, { "start_pos": 842, "end_pos": 844 }, { "start_pos": 933, "end_pos": 935 }, { "start_pos": 984, "end_pos": 986 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZM39-1", "uniprot_ac": "A0A286ZM39", "uniprot_id": "A0A286ZM39_PIG", "mass": { "chemical_mass": 43819.0, "monoisotopic_mass": 43819.0 }, "refseq": { "ac": "XP_020925735", "name": "xyloside xylosyltransferase 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925735" }, "gene_names": [ { "name": "XXYLT1", "type": "recommended", "evidence": [ { "id": "A0A286ZM39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ] }, { "name": "XXYLT1", "type": "synonym", "evidence": [ { "id": "XP_020925735", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925735" } ] } ], "protein_names": [ { "name": "Xyloside xylosyltransferase 1", "type": "recommended", "evidence": [ { "id": "A0A286ZM39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39/entry#names_and_taxonomy" } ] }, { "name": "2.4.2.62", "type": "synonym", "evidence": [ { "id": "A0A286ZM39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39/entry#names_and_taxonomy" } ] }, { "name": "UDP-xylose:alpha-xyloside alpha-1,3-xylosyltransferase", "type": "synonym", "evidence": [ { "id": "A0A286ZM39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39/entry#names_and_taxonomy" } ] }, { "name": "xyloside xylosyltransferase 1", "type": "synonym", "evidence": [ { "id": "XP_020925735", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925735" } ] } ], "function": [ { "annotation": "Alpha-1,3-xylosyltransferase, which elongates the O-linked xylose-glucose disaccharide attached to EGF-like repeats in the extracellular domain of target proteins by catalyzing the addition of the second xylose. Known targets include Notch proteins and coagulation factors, such as F9.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39#function" }, { "database": "UniProtKB", "id": "ARBA00059430", "url": "https://www.uniprot.org/uniprotkb/ARBA00059430#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "XXYLT1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39", "locus": { "chromosome": "13", "start_pos": 132066884, "end_pos": 132269965, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035414", "url": "https://www.ensembl.org/id/ENSSSCG00000035414" } ] } } ], "crossref": [ { "id": "ENSSSCG00000035414", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035414", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "110256394", "url": "https://www.ncbi.nlm.nih.gov/gene/110256394", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002495", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002495", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029044", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029044", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110256394", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110256394", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NVWCIFT", "url": "https://omabrowser.org/oma/group/NVWCIFT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZM39", "url": "https://www.orthodb.org/?gene=A0A286ZM39", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46612", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46612", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46612:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46612:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01501", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01501", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020925735", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925735", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "22820", "url": "https://www.rhea-db.org/rhea/22820", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZM39-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLLRGVPPCARAMARLGAVRSHYCALLLAAALAVCAFYYLGSGRETFSSATKRLKEARAGAPAVPSPPVLEVARGSVAPALGAKAKSLESGGAGPVDYHLLMMFTKAEHNAALQAKARIALRSLLRLAKFEANEVLNLHFVSEEASREVAKALLRELLPPAAGFKCKVVFHDVGVLTDKLFPVVEAMQKHFSAGSGTYYSDSIFFLSVAMHQIMPKEILRIIQLDLDLKYKTNIRELFEEFDNFLPGAVIGIAREMQPVYRHTFWQFRHENPKTRVGGPPPDGLPGFNSGVMLLNLEAMRQSPLYSRLLEPAQVQQLAAKYRFRGHLGDQDFFTMIGMEHPELFHVLDCTWNRQLCTWWRDHGYSDVFDAYFRCEGHVKIYHGNCNTPIPEA", "length": 393, "header": "tr|A0A286ZM39-1|A0A286ZM39_PIG Isoform 1 of Xyloside xylosyltransferase 1 OS=Sus scrofa OX=9823 GN=XXYLT1 PE=1 SV=1 CANONICAL=A0A286ZM39-1" }, "isoforms": [ { "isoform_ac": "A0A286ZM39-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39/entry#A0A286ZM39-1", "sequence": { "sequence": "MGLLRGVPPCARAMARLGAVRSHYCALLLAAALAVCAFYYLGSGRETFSSATKRLKEARAGAPAVPSPPVLEVARGSVAPALGAKAKSLESGGAGPVDYHLLMMFTKAEHNAALQAKARIALRSLLRLAKFEANEVLNLHFVSEEASREVAKALLRELLPPAAGFKCKVVFHDVGVLTDKLFPVVEAMQKHFSAGSGTYYSDSIFFLSVAMHQIMPKEILRIIQLDLDLKYKTNIRELFEEFDNFLPGAVIGIAREMQPVYRHTFWQFRHENPKTRVGGPPPDGLPGFNSGVMLLNLEAMRQSPLYSRLLEPAQVQQLAAKYRFRGHLGDQDFFTMIGMEHPELFHVLDCTWNRQLCTWWRDHGYSDVFDAYFRCEGHVKIYHGNCNTPIPEA", "length": 393, "header": "tr|A0A286ZM39-1|A0A286ZM39_PIG Isoform 1 of Xyloside xylosyltransferase 1 OS=Sus scrofa OX=9823 GN=XXYLT1 PE=1 SV=1 CANONICAL=A0A286ZM39-1" }, "locus": { "chromosome": "13", "start_pos": 132269876, "end_pos": 132071872, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042100.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042100.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032526.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032526.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110256394", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110256394", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2TS11-1", "protein_name": "Xyloside xylosyltransferase 1", "gene_name": "XXYLT1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGWARSQPCALALAAALAVCAFYYLGGGGETFSSATRRLRATRAAAPPATPPGPARRERTAAGGEAGRALHLLMMFTKAERSPALRGKGQAALRSLLRHGRLRRGDALHLHLVTDGASRDIGEGLLRDALRGAAFRHQVIIHDVSELTEKLFPIVEAMQKHFSAGSGTYYSDSIFFLSVAMHRIMPKEITQIIQVDLDLKYKANIRDLFEEFDNFQEGAVIGIAREMQPVYRHTFWQYRRENPQTRVGEPPPDGLPGFNSGVLLLNLEAMRRSKLYNQLLEPGMVQKLTEKYHFKGHLGDQDFFTMVGMEHPELFHVLDCTWNRQLCTWWKDHGYSDVFDQYFRCEGEVKIYHGNCNTPIPED", "length": 363 }, "evidence": [ { "id": "A0A286ZM39", "url": "https://omabrowser.org/oma/group/A0A286ZM39/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4ADL7-1", "protein_name": "Xyloside xylosyltransferase 1", "gene_name": "Xxylt1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAPPFRCPRSRLAPGSAVPPPLWPPPAAGLRALECCFEWARLLGRRLRRMDLLRGGAACARAMARLGAVRSHYCALLLAAALAVCAFYYLGSGRETFSSATKRLKEARAGAAAPTPPVPELARGSAAPASGAKAKNLEGGLAVPVDYHLLMMFTKAEHNAALQAKARVALRSLLRLAKFEPHEVLNLHFVSEEASREVAKALLRELLPPAAGFKCKVIFHDVAVLTDKLFPVVEAMQKYFSAGSGTYYSDSIFFLSVAMHQIMPKEILRIIQLDLDLKYKTNIRELFEEFDNFLPGAVIGIAREMQPVYRHTFWQFRHENPKTRVGDPPPEGLPGFNSGVMLLNLEAMRQSPLYGHLLEPAWVQQLADKYHFRGHLGDQDFFTMIGMEHPELFHVLDCTWNRQLCTWWRDHGYSDVFPAYFHCEGHVKIYHGNCNTPIPED", "length": 441 }, "evidence": [ { "id": "A0A286ZM39", "url": "https://omabrowser.org/oma/group/A0A286ZM39/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E7F9V4-1", "protein_name": "Xyloside xylosyltransferase 1 isoform X1", "gene_name": "xxylt1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVLRVLWGIMGRISMFRSYQIVLLLAAALAVVAFYYFGSEKQNFSSTTKRIKETQASHNSNRDDADLSIDIQPGHLESRPGAGAELEGKPKRFHALMMFTKVDKSLSLQQKFQTAMRSMVKHGRFLEDEILVLHYVSDLGSQEFGEKMLPELLLDASFQYEVVFHNVDTLTEKLFPIVEAMQKHFSAGSGAYYSDAIFFLSVAMHRIMPAELKRIVQLDLDLKFRSNIRDLFQEFNHFPSDAVIGIAREMQPVYRHTFWQYRKENPKSRVGDPPPDGLPGFNSGVMLLNLDSMRRSTVYNQLLEPERVARLADKYHFRGHLGDQDFFTMIGMEHTELFYPLTCGWNRQLCTWWRDHGYGDVFQLYYHCDGPVHIHHGNCNTPIPDD", "length": 387 }, "evidence": [ { "id": "A0A286ZM39", "url": "https://omabrowser.org/oma/group/A0A286ZM39/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3U4G3-1", "protein_name": "Xyloside xylosyltransferase 1", "gene_name": "Xxylt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLRGGAACARAMARLGALRSHYCALLLAAALAVCAFYYLGSGRETFSSATKRLKEARAGAAAPTPPAPELARGSAAPASGAKAKSLEGGVVVPVDYHLLMMFTKAEHNAPLQAKARVALSSLLRLAKFEAHEVLNLHFVSEEASREVAKALLRELLPPAAGFKCKVIFHDVAVLTDKLFPVVEAMQKYFSAGSGTYYSDSIFFLSVAMHQIMPKEIPRIIQLDLDLKYKTNIRELFEEFDNFLPGAVIGIAREMQPVYRHTFWQFRHENPKTRVGDPPPEGLPGFNSGVMLLNLEAMRQSPLYSHLLEPSWVQQLADKYHFRGHLGDQDFFTMIGMEHPELFHVLDCTWNRQLCTWWRDHGYSDVFQAYFRCEGHVKIYHGNCNTPIPED", "length": 392 }, "evidence": [ { "id": "A0A286ZM39", "url": "https://omabrowser.org/oma/group/A0A286ZM39/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NBI6-1", "protein_name": "Xyloside xylosyltransferase 1", "gene_name": "XXYLT1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGLLRGGLPCARAMARLGAVRSHYCALLLAAALAVCAFYYLGSGRETFSSATKRLKEARAGAPAAPSPPALELARGSVAPAPGAKAKSLEGGGAGPVDYHLLMMFTKAEHNAALQAKARVALRSLLRLAKFEAHEVLNLHFVSEEASREVAKGLLRELLPPAAGFKCKVIFHDVAVLTDKLFPIVEAMQKHFSAGLGTYYSDSIFFLSVAMHQIMPKEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRHTFWQFRHENPQTRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYSRLLEPAQVQQLADKYHFRGHLGDQDFFTMIGMEHPKLFHVLDCTWNRQLCTWWRDHGYSDVFEAYFRCEGHVKIYHGNCNTPIPED", "length": 393 }, "evidence": [ { "id": "A0A286ZM39", "url": "https://omabrowser.org/oma/group/A0A286ZM39/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "pmid": "" }, { "name": "manganese ion binding", "id": "GO:0030145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030145", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "pmid": "" }, { "name": "xylosyl alpha-1,3-xylosyltransferase activity", "id": "GO:0140560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140560", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein O-linked glycosylation via N-acetyl-galactosamine", "id": "GO:0016266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016266", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "pmid": "" }, { "name": "protein O-linked glycosylation via glucose", "id": "GO:0180059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0180059", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM39" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "22820", "name": "", "equation": "3-O-[alpha-D-xylosyl-(1->3)-beta-D-glucosyl]-L-seryl-[EGF-like domain protein] + UDP-alpha-D-xylose = 3-O-[alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)-beta-D-glucosyl]-L-seryl-[EGF-like domain protein] + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "22820", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/22820" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [ { "glytoucan_ac": "G26821XH", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G41179DF", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G82156OL", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G86535WT", "type": "Other", "subtype": "Other" } ], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZM55-1", "uniprot_ac": "A0A286ZM55", "uniprot_id": "A0A286ZM55_PIG", "mass": { "chemical_mass": 122763.0, "monoisotopic_mass": 122763.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A286ZM55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM55/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM55", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM55" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM55", "locus": {} } ], "crossref": [ { "id": "A0A286ZM55", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZM55", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000033726", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033726", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045206", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045206", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055406", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055406", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055408", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055408", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21047", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21047", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZM55", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZM55-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM55-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVAAPSKDSHRPPWRANRLPPEEQELDFDHLGKPMVGRSLSSSPFWEEALVSKIRTKSALEQSLMLEGILHCIQQHSQLINKEKVPEASIQELLKPWNLDLASPLEKTTLYHMFGLILRESASEELVTWHLAKVLELSHQSSSHREGMALAVGITSSSHLEQVWATLEHLGRTRFLRSALVSSDSQDNALKASFLSASVMLAKALGQESSTQSYKFTQIPELIQCLLCILQKEPNFLATLYRQKVILVIVKLSQLRPRLKPMVKSRILQTCLQSLYTLPPTEMLKTCLPPLEPAPDVLVLYQKCMQALDLLLQSFVSENKSMDELCFLLQHTEPWLKSSKSYERKRVVQSIFLLLKHVVDRVKLTEEAMPSELGHQVGLLTLLWRDKDEVTQSHSRQCVYLLLQLLIQQKGSTAEYMRLNKMKNFETSLRRDSEMKFYNLVKALDENLTVAQHTQLVLTLLQGLCSHNSLHCNLASKLLLTIIEDHSIRPEQVAEILQGLFQELPRIVFKEILHSMMRAVALLGTQHTQQAVEAVLSLCQPSERQVVPLWKALATTSPLARKVITLLYVKLKVRPPRELIRVPEQAKLVSLLALGTIYELLYVPEYRATVRWAFAGILLGLLTQLHYLFELDAVEGISDYQEESLEVKALSPSRTCLEALKGLFWTTNYWEVFAYLKLLRGWELFEHLETYPEGVTLLARAMAHYDCEVKAVLGQAVISLKSPEERDNIVAVLIIAEFLNGQELTQYVSRRTMDSFLSLGLNNPNQLVRTMSLKGLSSTLMHPQKVVLLRDQLASLLDSFLKPEPKDLLGLMEILGDILHRLGAQGIGCISLKIAQQLLPLFENEQEGVRGEAILLYGDVIHSGGKKFRQQLKNHAFQALVPLLLHLADSCPDVVMKTKFTFLRCALLLKWEFRKELFGKLAWGRGLGAENDIFIYMVESNFGSYHQFLMQALVYLSSPNRCLKVTAMKFIGGILQDYFTDLCFHLKRGDVKTLRKCEQGCLSREQGRDPRHPAWAPGTGPGPPTPHLGSGHRAMTPTHPAWAPGTGPGPPTPRLGSGHRAGTPTHPSAGAPGRAPGACPFPAGLPSAPQQAL", "length": 1093, "header": "tr|A0A286ZM55-1|A0A286ZM55_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=A0A286ZM55-1" }, "isoforms": [ { "isoform_ac": "A0A286ZM55-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM55/entry#A0A286ZM55-1", "sequence": { "sequence": "MVAAPSKDSHRPPWRANRLPPEEQELDFDHLGKPMVGRSLSSSPFWEEALVSKIRTKSALEQSLMLEGILHCIQQHSQLINKEKVPEASIQELLKPWNLDLASPLEKTTLYHMFGLILRESASEELVTWHLAKVLELSHQSSSHREGMALAVGITSSSHLEQVWATLEHLGRTRFLRSALVSSDSQDNALKASFLSASVMLAKALGQESSTQSYKFTQIPELIQCLLCILQKEPNFLATLYRQKVILVIVKLSQLRPRLKPMVKSRILQTCLQSLYTLPPTEMLKTCLPPLEPAPDVLVLYQKCMQALDLLLQSFVSENKSMDELCFLLQHTEPWLKSSKSYERKRVVQSIFLLLKHVVDRVKLTEEAMPSELGHQVGLLTLLWRDKDEVTQSHSRQCVYLLLQLLIQQKGSTAEYMRLNKMKNFETSLRRDSEMKFYNLVKALDENLTVAQHTQLVLTLLQGLCSHNSLHCNLASKLLLTIIEDHSIRPEQVAEILQGLFQELPRIVFKEILHSMMRAVALLGTQHTQQAVEAVLSLCQPSERQVVPLWKALATTSPLARKVITLLYVKLKVRPPRELIRVPEQAKLVSLLALGTIYELLYVPEYRATVRWAFAGILLGLLTQLHYLFELDAVEGISDYQEESLEVKALSPSRTCLEALKGLFWTTNYWEVFAYLKLLRGWELFEHLETYPEGVTLLARAMAHYDCEVKAVLGQAVISLKSPEERDNIVAVLIIAEFLNGQELTQYVSRRTMDSFLSLGLNNPNQLVRTMSLKGLSSTLMHPQKVVLLRDQLASLLDSFLKPEPKDLLGLMEILGDILHRLGAQGIGCISLKIAQQLLPLFENEQEGVRGEAILLYGDVIHSGGKKFRQQLKNHAFQALVPLLLHLADSCPDVVMKTKFTFLRCALLLKWEFRKELFGKLAWGRGLGAENDIFIYMVESNFGSYHQFLMQALVYLSSPNRCLKVTAMKFIGGILQDYFTDLCFHLKRGDVKTLRKCEQGCLSREQGRDPRHPAWAPGTGPGPPTPHLGSGHRAMTPTHPAWAPGTGPGPPTPRLGSGHRAGTPTHPSAGAPGRAPGACPFPAGLPSAPQQAL", 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"GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZM55", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM55" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": 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"database": "UniProtKB", "id": "A0A286ZM65", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM65" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF212", "url": "https://www.uniprot.org/uniprotkb/A0A286ZM65", "locus": { "chromosome": "18", "start_pos": 55541841, "end_pos": 55528138, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016773", "url": "https://www.ensembl.org/id/ENSSSCG00000016773" } ] } } ], "crossref": [ { "id": "A0A286ZM65", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZM65", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016773", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016773", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "102159734", "url": 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protein 4 OS=Sus scrofa OX=9823 GN=PRRT4 PE=4 SV=2 CANONICAL=A0A286ZMB3-1" }, "locus": { "chromosome": "18", "start_pos": 20029145, "end_pos": 20019988, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044048.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044048.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032603.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032603.2" } ] } }, { "isoform_ac": "A0A286ZZ89-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMB3/entry#A0A286ZZ89-1", "sequence": { "sequence": "MAGYSCLVLGLFCWVLLAVPVGPQPAPSVPGAHLTTLTPPPQSEASMLSLNLGLNFKFHLRGPAAAWGSPVTETQALSPGPSREPEEEVAGGLRTDPLWELLVGSLGNSPSEWGSAEGSSTPWASSLPLEPTSLLSGPTDQPTAPYQPRMGTVTWDTALTATAPPSSAPRLHQSELELKFDMALRAGAAPTLGHRTLPLLPSLRASLAEIAGRLGPFGFFGTTLPPLRNLSGPNFPGPVTSPSSASGVSDSPGFFGTTLSPPSSTLEGKLPSPRPLDPAASLSSALIATASLDSTTPTSGLGDPSPASLGNLSVQPECGPGSCSIRELPEREGQPPAAPLPLFFLSLEADWEEAKARWGLAWEAHVYGRLHRGLPPALPHQPAAQHRGGPLQRGPVGAWLLPGPCLRRSPTWARPLPHRLAGGADQGRAQRQV", "length": 433, "header": "tr|A0A286ZZ89-1|A0A286ZZ89_PIG Computationally mapped isoform of Proline rich transmembrane protein 4 OS=Sus scrofa OX=9823 GN=PRRT4 PE=4 SV=2 CANONICAL=A0A286ZMB3-1" }, "locus": { "chromosome": "18", "start_pos": 20028778, "end_pos": 20019988, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045306.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045306.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036952.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036952.2" } ] } } ], 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"ENSSSCG00000033375", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033375", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "102161292", "url": "https://www.ncbi.nlm.nih.gov/gene/102161292", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050694", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050694", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102161292", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102161292", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KACYLHE", "url": "https://omabrowser.org/oma/group/KACYLHE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZMG7", "url": "https://www.orthodb.org/?gene=A0A286ZMG7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14224", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14224", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14224:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14224:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF27089", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27089", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020932591", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932591", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZMG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZMG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWSLRFISAEALVSHPRVAQQSLDGVACNIYPLLFKASYLLEQAEVIRVLLEHWPLEDFRLGALLRPNADHPGDLRDRACRACLEACVRGLADHVRRGGAGRRLEVADLTGIRDVQVQRCPCGKALGRWGRTELLARTCCELQGEPRAARRPVEVLADIFVTGGNFEAVLRALGPPGSAPLRVRCLSFRADSLRPGQLLHVLRLAGPSELRRLEVVHNVRLHAGHVQELLAQVGFPRLVALTLPAKAFDAPPASSATSHGEAALLTSIARELSRMTQLTELSVAFSTLTGKIEKLLGPLRTPLRVLDLANCSLNHADMAFLADCPHAAHLEVLDLSGHCLVDLFPSTFFRLLGRAAPSLRALTLEECGIEDRHVGGLILALSACRRLRELRFLGNPLSARALRRLFASALCELPMLQCVEFPVPKDCYPEGSAYPQDELAMSKFDQQKYDVIAEELRAVLLRAGRADVRVSTPLFGSFDPDIQETSNELGAFLLQAFRTALENFSKALKQME", "length": 512, "header": "tr|A0A286ZMG7-1|A0A286ZMG7_PIG Isoform 1 of Leucine-rich repeat-containing protein 14B OS=Sus scrofa OX=9823 GN=LRRC14B PE=3 SV=1 CANONICAL=A0A286ZMG7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMG7/entry#A0A286ZMG7-1", "sequence": { "sequence": "MWSLRFISAEALVSHPRVAQQSLDGVACNIYPLLFKASYLLEQAEVIRVLLEHWPLEDFRLGALLRPNADHPGDLRDRACRACLEACVRGLADHVRRGGAGRRLEVADLTGIRDVQVQRCPCGKALGRWGRTELLARTCCELQGEPRAARRPVEVLADIFVTGGNFEAVLRALGPPGSAPLRVRCLSFRADSLRPGQLLHVLRLAGPSELRRLEVVHNVRLHAGHVQELLAQVGFPRLVALTLPAKAFDAPPASSATSHGEAALLTSIARELSRMTQLTELSVAFSTLTGKIEKLLGPLRTPLRVLDLANCSLNHADMAFLADCPHAAHLEVLDLSGHCLVDLFPSTFFRLLGRAAPSLRALTLEECGIEDRHVGGLILALSACRRLRELRFLGNPLSARALRRLFASALCELPMLQCVEFPVPKDCYPEGSAYPQDELAMSKFDQQKYDVIAEELRAVLLRAGRADVRVSTPLFGSFDPDIQETSNELGAFLLQAFRTALENFSKALKQME", "length": 512, "header": "tr|A0A286ZMG7-1|A0A286ZMG7_PIG Isoform 1 of Leucine-rich repeat-containing protein 14B OS=Sus scrofa OX=9823 GN=LRRC14B PE=3 SV=1 CANONICAL=A0A286ZMG7-1" }, "locus": { "chromosome": "16", "start_pos": 79882929, "end_pos": 79878190, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038979.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038979.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032769.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032769.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMG7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102161292", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102161292", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XZE5-1", "protein_name": "Leucine-rich repeat-containing protein 14B", "gene_name": "LRRC14B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKSLQFLSAEAFVSDAEFARKNLGSVAHNLFPLLFKASYLLEQREVIHDLVEIWPLADFNIGKLLGTTVDYQEDLSHRRCSVCLESCLTGLRDYVLNHPSPCVKRLKVVDLTGIKDVEVQLCECKKTMGRWARTKLLSKLCLEVLVHLQQTQCKPCTFEISIDVLIDLFVTERNYELVVQALLQKRYCPLKICCVAFRADNLALQKFFYIIKLTDPSSLRKLEVVHNVRLEMEHLEILFNSIHFPLLMSLTLPARTFNVRRLTAADELVLTTIGEKMGEMTQLTELSLAFSILTGRIRKLLSPLKTPLKMLDVSNCSLNHSDMVYLANSIHSYHLEALDLSGHNIPELYPSTFFKLLSHSSPVLRSLILEDCNIQDTHVNMLIVALSPCQKLQEFKFLGNPLSSQALKQLFTFLCELPVLKNVEFPVPKDCYPTDITYPIDDASLCRFDHQKYDSIAEELNFILLQANREDVKTSTPLFGSYDAAVQETNDELGAYLIKSFKETLEKLTTSLSKMS", "length": 516 }, "evidence": [ { "id": "A0A286ZMG7", "url": "https://omabrowser.org/oma/group/A0A286ZMG7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6NHZ5-1", "protein_name": "Leucine-rich repeat-containing protein 14B", "gene_name": "LRRC14B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDTMRSLRFISAEALVSHPQVARQSLDSVAHNLYPLLFKASYLLEQAEVTRAVLGRWPLEEFRLGALLGPGADHPQDLRDRTCRACLEALVRGLADHVLQDRSRRRLRVADLTGIRDVQVQRCPCGRALGRWGRTQLLARTCCELQAEPLAAGRPVEVLADLFVTEGNFEAVVQALRPAGPAPLRVHCPSFRADSLSPSQLLHVLRLAGPGALRKLEVVHNVRLHAGHVQQLLAQVGFPRLASLTLPTKAFDAPPTYASTPDGEDPLLASIARELSKMAQLTELSVAFSTLTGKIPTLLGPLQTPLRVLDLANCALNHTDMAFLADCAHAAHLEVLDLSGHNLVSLYPSTFFRLLSQASRTLRILTLEECGIVDSHVGMLILGLSPCHRLRQLKFLGNPLSARALRRLFTALCELPELRCIEFPVPKDCYPEGAAYPQDELAMSKFNQQKYDEIAEELRAVLLRADREDIQVSTPLFGSFDPDIQETSNELGAFLLQAFKTALENFSRALKQIE", "length": 514 }, "evidence": [ { "id": "A0A286ZMG7", "url": "https://omabrowser.org/oma/group/A0A286ZMG7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3ZJ80-1", "protein_name": "Leucine-rich repeat-containing protein 14B", "gene_name": "Lrrc14b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTRASLPLSVLSPEAAAAKNSHKLHRLWEEPHGQHHSDTMRSLRFISAKALASHPQLVQENLDSIAYNLYPLLFKTSYLLEQADITRALLSHWPLEEFRLAVLLGPNIDHPEDLRDRACKACLEACMQGIADHVLRSGSNRLRVADFTGIQDVQVQQCPCGRALGRWGRTKVLARICCQLQGQPCTAGHPIEVFADLFVTEGNFDMVVQALKPSGPAPLQVCCPSLRADSLSPGQLLQVLGLAGPGKLRKLEVVHNVRLHAGHVQQLLAQVGFPQLTSLTLPTKAFDAPPTCAPDPEGEDLLLTSIAWELSQMNQLTELSVAFSTLTGKIQTLLSPLKTPLRVLDLANCALNHEDISFLANCNHTAHLEVLDLSGHNLVHLYPSTFFRLLSQAAQTLKVLTLEDCNITDSHVNMMILGLSPCSQLQQFKFLGNPLSGSALRRLFAALCELPRLRHIEFPVPKDCYPEGAIYPQDELSVSKFDQQKYDMIAEDLQAVLLRANREDIQASTPLFGSFDPDIHETSNELGTFLLQAFKTALENFSRALEQME", "length": 550 }, "evidence": [ { "id": "A0A286ZMG7", "url": "https://omabrowser.org/oma/group/A0A286ZMG7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3IFX3-1", "protein_name": "Leucine-rich repeat-containing protein 14B", "gene_name": "Lrrc14b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MRSLRFISAEALVSHPQLAQENLDHIAYNLYPLLFKASYLLEQAEVTRAVLSHWPLEEFRLAVLLGPNIDHPKDLRDRACKACLEACLEGLADHVLQSGSNRLRVADFTGIQDVQVQQCPCGRALGRWGRTKVLARICCQLQGQPCTARHPIEVFTDLFVTEGNFDMVVQALKPAGPAPLQVCCPSLRADSLSPGQLLQVLGLARPSKLRKLEVVHNVRLHAGHVQQLLAQVGFPQLTSLTLPTKAFDAPPTCAPTPEGENPLLNSIAWELSQMNKLTELSVAFSTLTGKIQTLLSPLKTPLRVLDLANCALNHEDMSFLADCKHTAHLEVLDLSGHNLVHLYPSTFFRLLSQAAQTLRVLTLEECNITDNHVGMMILGLSPCSQLQEFKFLGNPLSASALQRLFAALCELPRLRHIEFPVPKDCYPEGTAYPHDELSVSKFDKQKYDMIAEDLRAVLLRANREDIQASTPVFGSFDPDIHETSNELGTFLLQAFKTALENFSRALEQME", "length": 510 }, "evidence": [ { "id": "A0A286ZMG7", "url": "https://omabrowser.org/oma/group/A0A286ZMG7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q1L8H0-1", "protein_name": "Leucine-rich repeat-containing protein 14B", "gene_name": "lrrc14b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLKFLSAEAFVQTGPNARRNLHCLSYNLYPILFKASYLHEEASFLHDLVQTWPLTELNLRKLLGKTTDCPEDLTCSTCRLCLEAFLTGLRDYVLQASTTYAKILQVVDLIGIRDTEHQICQCRRTLGRWARTEMLTRVCYETMVSMQAGQSAPSAFNVEVDVRLDAFVTGRNYEVVSQALLLRRHCPLKLQFVGLRVDSLSLRNLFYLLKLVESHGPQKLEVVHNVHLEAPHIEVMLSQLKFPRLRSLTFPAQALNVHRLGLEDQDLMRVLGELMSKLTELRELYLGFSTLTGHLRKLLSPLNTPLECIELANCSINALDMAYFANSLHSEHLVKLDLSGHEVADLFPNTFRKLLQRCSSTLISLGLEECGLDDEKLDLLTQALTPCHGLQELKILGNPLTSAALHRLFNTLANAYPALRYVELPVPRDCYPESVTYPLDDRTLVNYDSDKFQQARTELVGILEREGKGHVEVCTPLLGVYDADINETSNELGVSMLSSFNNVIGSFIDTVNTVTQRREHRLME", "length": 526 }, "evidence": [ { "id": "A0A286ZMG7", "url": "https://omabrowser.org/oma/group/A0A286ZMG7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3UJB3-1", "protein_name": "Leucine-rich repeat-containing protein 14B", "gene_name": "Lrrc14b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRSLRFISAEALVSHSQLVQENLDNIAYNLYPLLFKASYLLEQADVTRALLSHWPLEEFRLAVLLRPNTDHPEDLRDRACKACLEACMQGIADHVLKSGSNRLRVADFTGIQDVQVQQCPCGRALGRWGRTKVLARTCCQLQGQPCSAGHPIEVFADLFVTEGNFDMVVQALKPLGPAPLQVCCPSLRADSLSPGQLLQVLGLAGPGNLRKLEVVHNVRLHAGHVQQLLTQVGFPQLTSLTLPTKAFDAPPTCAPDPEGEDLLLTSIAWELSQMNQLTELSVAFSTLTGKIQTLLSPLKTPLRVLDLANCALNHEDISFLADCNHTAHLEVLDLSGHNLVHLYPSTFFRLLSQAAQTLRVLTLEECNITDSHVNMMILGLSPCSQLQQFKFLGNPLSGSALRRLFAALCELPRLRHIEFPVPKDCYPEGAIYPQDELSVSKFDQQKYDVIAEDLRAVLLRANREDIQVSTPLFGSFDPDIHETSNELGTFLLQAFKTALENFSRALEQME", "length": 510 }, "evidence": [ { "id": "A0A286ZMG7", "url": "https://omabrowser.org/oma/group/A0A286ZMG7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 310, "end_pos": 312, "annotation": "n_glycosylation_sequon" }, { "start_pos": 503, "end_pos": 505, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 310, "end_pos": 312 }, { "start_pos": 503, "end_pos": 505 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZMH0-1", "uniprot_ac": "A0A286ZMH0", "uniprot_id": "A0A286ZMH0_PIG", "mass": { "chemical_mass": 34283.0, "monoisotopic_mass": 34283.0 }, "refseq": {}, "gene_names": [ { "name": "TCF25", "type": "recommended", "evidence": [ { "id": "A0A286ZMH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A286ZMH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TCF25", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0", "locus": {} } ], "crossref": [ { "id": "A0A286ZMH0", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZMH0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000036102", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036102", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR006994", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006994", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR22684", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22684", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22684:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22684:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZMH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZMH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSRRALRRLRGEQRGQEPLGPGALQFVLHDDDDAEEECPQQGPGGRRARGTGKEGVRVNNRFELINIEDLDEGPVVNGGRTDCPLTDTVASGSKRRPQGGRTATKRDGNVADRAVPPEQSSASGKLRKKKRKQKNKKNAAGETSEDGLEDIGRILERIEDGSGSRRPGPPPLSSRKHVLYVEHRHLNPDTELKRYFGARAVLGEQRLPSLSFGCCCLRRTHPCFSCMEFGFLAGCDLCPCGLWWLMSFCGQRAPRAWAFPWRRLSQPSPRCGSPPLAGTFSFQVRIFSGYGAKCLLKKELLIQAAQSCLL", "length": 310, "header": "tr|A0A286ZMH0-1|A0A286ZMH0_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN=TCF25 PE=4 SV=3 CANONICAL=A0A286ZMH0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0/entry#A0A286ZMH0-1", "sequence": { "sequence": "MSRRALRRLRGEQRGQEPLGPGALQFVLHDDDDAEEECPQQGPGGRRARGTGKEGVRVNNRFELINIEDLDEGPVVNGGRTDCPLTDTVASGSKRRPQGGRTATKRDGNVADRAVPPEQSSASGKLRKKKRKQKNKKNAAGETSEDGLEDIGRILERIEDGSGSRRPGPPPLSSRKHVLYVEHRHLNPDTELKRYFGARAVLGEQRLPSLSFGCCCLRRTHPCFSCMEFGFLAGCDLCPCGLWWLMSFCGQRAPRAWAFPWRRLSQPSPRCGSPPLAGTFSFQVRIFSGYGAKCLLKKELLIQAAQSCLL", "length": 310, "header": "tr|A0A286ZMH0-1|A0A286ZMH0_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN=TCF25 PE=4 SV=3 CANONICAL=A0A286ZMH0-1" }, "locus": { "chromosome": "6", "start_pos": 208705, "end_pos": 196264, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050204.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050204.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032752.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032752.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "RQC complex", "id": "GO:1990112", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990112", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMH0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMH0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZMH0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 310, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZMH0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZMH0" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZMI9-1", "uniprot_ac": "A0A286ZMI9", "uniprot_id": "A0A286ZMI9_PIG", "mass": { "chemical_mass": 519250.0, "monoisotopic_mass": 519250.0 }, "refseq": { "ac": "XP_020921121", "name": "sacsin isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921121" }, "gene_names": [ { "name": "SACS", "type": "recommended", "evidence": [ { "id": "A0A286ZMI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ] }, { "name": "SACS", "type": "synonym", "evidence": [ { "id": "XP_020921121", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921121" } ] } ], "protein_names": [ { "name": "Sacsin", "type": "recommended", "evidence": [ { "id": "A0A286ZMI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9/entry#names_and_taxonomy" } ] }, { "name": "DnaJ homolog subfamily C member 29", "type": "synonym", "evidence": [ { "id": "A0A286ZMI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9/entry#names_and_taxonomy" } ] }, { "name": "sacsin isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020921121", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921121" } ] } ], "function": [ { "annotation": "Co-chaperone which acts as a regulator of the Hsp70 chaperone machinery and may be involved in the processing of other ataxia-linked proteins.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9#function" }, { "database": "UniProtKB", "id": "ARBA00054721", "url": "https://www.uniprot.org/uniprotkb/ARBA00054721#function" }, { "database": "UniProtKB", "id": "A0A287A818", "url": "https://www.uniprot.org/uniprotkb/A0A287A818#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SACS", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9", "locus": { "chromosome": "11", "start_pos": 2382906, "end_pos": 2442316, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035493", "url": "https://www.ensembl.org/id/ENSSSCG00000035493" } ] } } ], "crossref": [ { "id": "ENSSSCG00000035493", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035493", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100624042", "url": "https://www.ncbi.nlm.nih.gov/gene/100624042", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007842", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007842", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036890", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036890", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052972", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052972", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624042", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624042", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EVMNAFW", "url": "https://omabrowser.org/oma/group/EVMNAFW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZMI9", "url": "https://www.orthodb.org/?gene=A0A286ZMI9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15600", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15600", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15600:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15600:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00240", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00240", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25794", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25794", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020921121", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921121", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZMI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A818", "url": "https://www.uniprot.org/uniprotkb/A0A287A818", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A818-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A818-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METQEKRWLRVTVLPGCVGCRTVAVPASWTVRDVKRRLAAETGFPASEQRLWLGGRQLCDWIPIGELARGSRHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAQYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELADQFAPFIGIFGSTEETFLSGSFPGTFFRFPLRLQPSQLSGNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLHVREADGTEKLVFRVTASEGEAPKLERPDAVRALGAAISSYCAKVPSKSITCATYPMDVVVEDACAGGTQRTSWLVCNSVGGRGISTQLDALADELKFVPVIGIAMPLSSGGEEAGGAASGFVGRAFCFLPLPPGDESKTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNELLVGSVVPRAYATLILDAISRLQAERSPGLPLSADAVYRLWPDVDRARVHWQPVLEPLFRELFQNEVLYSLSGHWVRLEQACFSELDESLDYTRSVLSYLQSAGKQVVKVPAHVAAAVQLAAAGARPAGKVTPAWTRQVLRKAAPLGGAAEKLHLLEFVLSDQAYSELLGLELLPLQSGSFVPFSSSVSDQDVVYITSEDHPRSLFPGLEGRFILDNLKPHLLAALKEAAQTRAQQLLWGYSGRPCTQLQLLSPERFARLIKEVVSNFWPGRDLVVQWYPCDRDRNHPPVSWLKMVWKHLYVHFSEDLTLFDEMPLIPSTALEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGTVLKKLDASIQHPLIKKYIHSPSPHAVLQVMEKMPLQRLCSQIASLLPTHKDALRQFFASLTDSSERERRIIQELTIFKRINHSPSEGVSSYTKLKGCRVLHHTARLPAGLRLSLPVIDSSDEATIRLANLLKVETLKTTTCLKLIVKDIESAFYSQEETTHLMLWVLENLSSLKNENPNVLEWLVPLKFIQLSQGRVVSASELFDPAVDVLRDLFYSEEETCFPPPAFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVSSCPNQDPLLKKARTLLLVLNKNHALLQSSEGKVTLKKIRWVPACKERPPNYPGSLVWKGDLCDLCAPPDMCDAAHAILVGSSLPLVESVHGNLEKALGIFTKPSISAVLKHLKAVVDWYTSKNFSDEDYYQFQHILLEIYGFMHDHLNEGKDAFRALKFPWVWTGKKFCPLAQAVIKPFHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYVKSEQELSDQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSKDPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNLDIRESLLDPGMAACHGPALWSFNNSEFSDADFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYGGTLFRLSFRTQQEAKVSEVSSTCYNTADIYALVDEFSLCGHRLIIFTQSVTSMYLKYLKIEESNPSLAQDTIIIKKKSCPSKALSAPVVSVLREAAKLMKTCGSGNKKLPAEAPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELPQKTVECTTWLICSCMDTGEALRFSLSESGRRLGLVPCGAVGVLLAEVQDHTWAVRPQAGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEVWKTDTKGRWNSTFMRHVIVKAYLEALCVLRDLAASGELMDYTYHAVWPHPDLVHDDFSVICQGFYEDIAHGRGKELTRVFSDGSTWVSMKHVRFLDDSILKRRDVGPAAFKIFLKYLKKTGPETLCAVELPSSVKLGFEEAGCKQILLENTFSEKQFFSEVFFPNIQDIEAELRDPLMNFVLNEKVDEFSGILRVTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDTKDGRFPYGSTRDYLNPIILIKLVQLGMAKDDILWDDMLERAESIAEINESDHGAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQTIPFLPFLTKPAGFSLDWKGNSFKPETMFAATDLYTAEYQDMVCLLHPILNENSHSFRGCGSMPLAVKEFLGLLRKPTVDLVVRQLKEVAKSADDGVGLYQESITSACYRYLHEAATQSDSAKAAIVERLRTFSFILVENAYVDVEKVAFHLNFEAAPYLYQLPNKYKNNFRELFESVGVRQSFSVEDFARVLESIDQEKESKQITEEKFQLCRRIISEGIWGLIREKKQEFCEKNYGKILLPDTNLRLLPAKSLCYNDCPWIKVKDSTVKYCHADIPREVAVKLGAVPKRHKALERYASNICFTALGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPCKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSVSPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGALNVLYSVKGKITDGDRLKRKQFHASVMDSVSKKRQLKDIPVQQITYTMDTEDSEGNLTAWLICNRSGFSSLERVSRSVLSAHRNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDDGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGSDPALSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYSCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSSKTRPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLVDADIPVSYVTPADVRAFLMTFSSPDTSCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEEREIEVEGLPLLITLDSVLQTFDARRPKFLTTYHELIPSRKDLFMNTLYLKYSNILLSCNVAKVFDISSFADLLSSVLPREYKTKTCTKWKDNFASESWLKNAWHFVSEAVNVKEDQDEAKPNFDAVADTLKDWALLPGTKFTVSANQLVVPEGDVLLPLSLMHIAVFPNAQSDKVFHALMKAGCIQLALNKICSKDSAFVPLLSRHTANIESPTSILKAVHYMVQTSTFRTDKLVENDFEALLMYFNCNLNHLMSQDDIKILKSLPCYKSISGRYMSIAKFGTCYVLTKSIPSAEVEKWTQLSSSAFLEEKMHLKELYEVLGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSSSEELSEIKEQLFEKLESLLIIHDANGRLKQAKHFYDRTVRVFEVMLPEKLFIPKDFFKKLEQLIKPKNQAAFMTSWVEFLRNIGLKHILSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERMDLLSGNFLKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIREQEGSELGPQEQLEQVLSMLSVNLDPPLDKVISNCRNICNITTLDEDMVKTRARVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDVISTKQYVEVLSRIFKNSEGKQLDPNEMRTVKRVVSGLFKSLQNDSVKVRGDLESVRDLALYLPSQDGRLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGTAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGCNDIYRISEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNSSFLGKIYQIDIGYSEYKIVSSLDLYKFSRPEESSQSRDSAPSTPTSPTEFPAPGLRSIPPLFSGRETPKTPSSKHHSPKKLKANSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDLANEVFKHLQNEINRLEKQAFLDQNSDRASRRPFSTPASRFPSDKFSFQRFYTSWNQEATSHKSERQQQNKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCFLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEYGQQLEGLTNDVHTLEAYGVDGLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFIQQKL", "length": 4588, "header": "tr|A0A286ZMI9-1|A0A286ZMI9_PIG Isoform 1 of Sacsin OS=Sus scrofa OX=9823 GN=SACS PE=4 SV=1 CANONICAL=A0A286ZMI9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9/entry#A0A286ZMI9-1", "sequence": { "sequence": "METQEKRWLRVTVLPGCVGCRTVAVPASWTVRDVKRRLAAETGFPASEQRLWLGGRQLCDWIPIGELARGSRHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAQYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELADQFAPFIGIFGSTEETFLSGSFPGTFFRFPLRLQPSQLSGNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLHVREADGTEKLVFRVTASEGEAPKLERPDAVRALGAAISSYCAKVPSKSITCATYPMDVVVEDACAGGTQRTSWLVCNSVGGRGISTQLDALADELKFVPVIGIAMPLSSGGEEAGGAASGFVGRAFCFLPLPPGDESKTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNELLVGSVVPRAYATLILDAISRLQAERSPGLPLSADAVYRLWPDVDRARVHWQPVLEPLFRELFQNEVLYSLSGHWVRLEQACFSELDESLDYTRSVLSYLQSAGKQVVKVPAHVAAAVQLAAAGARPAGKVTPAWTRQVLRKAAPLGGAAEKLHLLEFVLSDQAYSELLGLELLPLQSGSFVPFSSSVSDQDVVYITSEDHPRSLFPGLEGRFILDNLKPHLLAALKEAAQTRAQQLLWGYSGRPCTQLQLLSPERFARLIKEVVSNFWPGRDLVVQWYPCDRDRNHPPVSWLKMVWKHLYVHFSEDLTLFDEMPLIPSTALEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGTVLKKLDASIQHPLIKKYIHSPSPHAVLQVMEKMPLQRLCSQIASLLPTHKDALRQFFASLTDSSERERRIIQELTIFKRINHSPSEGVSSYTKLKGCRVLHHTARLPAGLRLSLPVIDSSDEATIRLANLLKVETLKTTTCLKLIVKDIESAFYSQEETTHLMLWVLENLSSLKNENPNVLEWLVPLKFIQLSQGRVVSASELFDPAVDVLRDLFYSEEETCFPPPAFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVSSCPNQDPLLKKARTLLLVLNKNHALLQSSEGKVTLKKIRWVPACKERPPNYPGSLVWKGDLCDLCAPPDMCDAAHAILVGSSLPLVESVHGNLEKALGIFTKPSISAVLKHLKAVVDWYTSKNFSDEDYYQFQHILLEIYGFMHDHLNEGKDAFRALKFPWVWTGKKFCPLAQAVIKPFHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYVKSEQELSDQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSKDPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNLDIRESLLDPGMAACHGPALWSFNNSEFSDADFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYGGTLFRLSFRTQQEAKVSEVSSTCYNTADIYALVDEFSLCGHRLIIFTQSVTSMYLKYLKIEESNPSLAQDTIIIKKKSCPSKALSAPVVSVLREAAKLMKTCGSGNKKLPAEAPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELPQKTVECTTWLICSCMDTGEALRFSLSESGRRLGLVPCGAVGVLLAEVQDHTWAVRPQAGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEVWKTDTKGRWNSTFMRHVIVKAYLEALCVLRDLAASGELMDYTYHAVWPHPDLVHDDFSVICQGFYEDIAHGRGKELTRVFSDGSTWVSMKHVRFLDDSILKRRDVGPAAFKIFLKYLKKTGPETLCAVELPSSVKLGFEEAGCKQILLENTFSEKQFFSEVFFPNIQDIEAELRDPLMNFVLNEKVDEFSGILRVTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDTKDGRFPYGSTRDYLNPIILIKLVQLGMAKDDILWDDMLERAESIAEINESDHGAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQTIPFLPFLTKPAGFSLDWKGNSFKPETMFAATDLYTAEYQDMVCLLHPILNENSHSFRGCGSMPLAVKEFLGLLRKPTVDLVVRQLKEVAKSADDGVGLYQESITSACYRYLHEAATQSDSAKAAIVERLRTFSFILVENAYVDVEKVAFHLNFEAAPYLYQLPNKYKNNFRELFESVGVRQSFSVEDFARVLESIDQEKESKQITEEKFQLCRRIISEGIWGLIREKKQEFCEKNYGKILLPDTNLRLLPAKSLCYNDCPWIKVKDSTVKYCHADIPREVAVKLGAVPKRHKALERYASNICFTALGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPCKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSVSPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGALNVLYSVKGKITDGDRLKRKQFHASVMDSVSKKRQLKDIPVQQITYTMDTEDSEGNLTAWLICNRSGFSSLERVSRSVLSAHRNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDDGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGSDPALSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYSCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSSKTRPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLVDADIPVSYVTPADVRAFLMTFSSPDTSCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEEREIEVEGLPLLITLDSVLQTFDARRPKFLTTYHELIPSRKDLFMNTLYLKYSNILLSCNVAKVFDISSFADLLSSVLPREYKTKTCTKWKDNFASESWLKNAWHFVSEAVNVKEDQDEAKPNFDAVADTLKDWALLPGTKFTVSANQLVVPEGDVLLPLSLMHIAVFPNAQSDKVFHALMKAGCIQLALNKICSKDSAFVPLLSRHTANIESPTSILKAVHYMVQTSTFRTDKLVENDFEALLMYFNCNLNHLMSQDDIKILKSLPCYKSISGRYMSIAKFGTCYVLTKSIPSAEVEKWTQLSSSAFLEEKMHLKELYEVLGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSSSEELSEIKEQLFEKLESLLIIHDANGRLKQAKHFYDRTVRVFEVMLPEKLFIPKDFFKKLEQLIKPKNQAAFMTSWVEFLRNIGLKHILSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERMDLLSGNFLKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIREQEGSELGPQEQLEQVLSMLSVNLDPPLDKVISNCRNICNITTLDEDMVKTRARVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDVISTKQYVEVLSRIFKNSEGKQLDPNEMRTVKRVVSGLFKSLQNDSVKVRGDLESVRDLALYLPSQDGRLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGTAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGCNDIYRISEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNSSFLGKIYQIDIGYSEYKIVSSLDLYKFSRPEESSQSRDSAPSTPTSPTEFPAPGLRSIPPLFSGRETPKTPSSKHHSPKKLKANSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDLANEVFKHLQNEINRLEKQAFLDQNSDRASRRPFSTPASRFPSDKFSFQRFYTSWNQEATSHKSERQQQNKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCFLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEYGQQLEGLTNDVHTLEAYGVDGLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFIQQKL", "length": 4588, "header": "tr|A0A286ZMI9-1|A0A286ZMI9_PIG Isoform 1 of Sacsin OS=Sus scrofa OX=9823 GN=SACS PE=4 SV=1 CANONICAL=A0A286ZMI9-1" }, "locus": { "chromosome": "11", "start_pos": 2442117, "end_pos": 2383910, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042692.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042692.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055373.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055373.2" } ] } }, { "isoform_ac": "A0A287A818-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9/entry#A0A287A818-1", "sequence": { "sequence": "METQEKRWLRVTVLPGCVGCRTVAVPASWTVRDVKRRLAAETGFPASEQRLWLGGRQLCDWIPIGELARGSRHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAQYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELADQFAPFIGIFGSTEETFLSGSFPGTFFRFPLRLQPSQLSGNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLHVREADGTEKLVFRVTASEGEAPKLERPDAVRALGAAISSYCAKVPSKSITCATYPMDVVVEDACAGGTQRTSWLVCNSVGGRGISTQLDALADELKFVPVIGIAMPLSSGGEEAGGAASGFVGRAFCFLPLPPGDESKTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNELLVGSVVPRAYATLILDAISRLQAERSPGLPLSADAVYRLWPDVDRARVHWQPVLEPLFRELFQNEVLYSLSGHWVRLEQACFSELDESLDYTRSVLSYLQSAGKQVVKVPAHVAAAVQLAAAGARPAGKVTPAWTRQVLRKAAPLGGAAEKLHLLEFVLSDQAYSELLGLELLPLQSGSFVPFSSSVSDQDVVYITSEDHPRSLFPGLEGRFILDNLKPHLLAALKEAAQTRGRPCTQLQLLSPERFARLIKEVVSNFWPGRDLVVQWYPCDRDRNHPPVSWLKMVWKHLYVHFSEDLTLFDEMPLIPSTALEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGTVLKKLDASIQHPLIKKYIHSPSPHAVLQVMEKMPLQRLCSQIASLLPTHKDALRQFFASLTDSSERERRIIQELTIFKRINHSPSEGVSSYTKLKGCRVLHHTARLPAGLRLSLPVIDSSDEATIRLANLLKVETLKTTTCLKLIVKDIESAFYSQEETTHLMLWVLENLSSLKNENPNVLEWLVPLKFIQLSQGRVVSASELFDPAVDVLRDLFYSEEETCFPPPAFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVSSCPNQDPLLKKARTLLLVLNKNHALLQSSEGKVTLKKIRWVPACKERPPNYPGSLVWKGDLCDLCAPPDMCDAAHAILVGSSLPLVESVHGNLEKALGIFTKPSISAVLKHLKAVVDWYTSKNFSDEDYYQFQHILLEIYGFMHDHLNEGKDAFRALKFPWVWTGKKFCPLAQAVIKPFHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYVKSEQELSDQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSKDPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNLDIRESLLDPGMAACHGPALWSFNNSEFSDADFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYGGTLFRLSFRTQQEAKVSEVSSTCYNTADIYALVDEFSLCGHRLIIFTQSVTSMYLKYLKIEESNPSLAQDTIIIKKKSCPSKALSAPVVSVLREAAKLMKTCGSGNKKLPAEAPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELPQKTVECTTWLICSCMDTGEALRFSLSESGRRLGLVPCGAVGVLLAEVQDHTWAVRPQAGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEVWKTDTKGRWNSTFMRHVIVKAYLEALCVLRDLAASGELMDYTYHAVWPHPDLVHDDFSVICQGFYEDIAHGRGKELTRVFSDGSTWVSMKHVRFLDDSILKRRDVGPAAFKIFLKYLKKTGPETLCAVELPSSVKLGFEEAGCKQILLENTFSEKQFFSEVFFPNIQDIEAELRDPLMNFVLNEKVDEFSGILRVTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDTKDGRFPYGSTRDYLNPIILIKLVQLGMAKDDILWDDMLERAESIAEINESDHGAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQTIPFLPFLTKPAGFSLDWKGNSFKPETMFAATDLYTAEYQDMVCLLHPILNENSHSFRGCGSMPLAVKEFLGLLRKPTVDLVVRQLKEVAKSADDGVGLYQESITSACYRYLHEAATQSDSAKAAIVERLRTFSFILVENAYVDVEKVAFHLNFEAAPYLYQLPNKYKNNFRELFESVGVRQSFSVEDFARVLESIDQEKESKQITEEKFQLCRRIISEGIWGLIREKKQEFCEKNYGKILLPDTNLRLLPAKSLCYNDCPWIKVKDSTVKYCHADIPREVAVKLGAVPKRHKALERYASNICFTALGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPCKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSVSPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGALNVLYSVKGKITDGDRLKRKQFHASVMDSVSKKRQLKDIPVQQITYTMDTEDSEGNLTAWLICNRSGFSSLERVSRSVLSAHRNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDDGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGSDPALSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYSCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSSKTRPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLVDADIPVSYVTPADVRAFLMTFSSPDTSCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEEREIEVEGLPLLITLDSVLQTFDARRPKFLTTYHELIPSRKDLFMNTLYLKYSNILLSCNVAKVFDISSFADLLSSVLPREYKTKTCTKWKDNFASESWLKNAWHFVSEAVNVKEDQDEAKPNFDAVADTLKDWALLPGTKFTVSANQLVVPEGDVLLPLSLMHIAVFPNAQSDKVFHALMKAGCIQLALNKICSKDSAFVPLLSRHTANIESPTSILKAVHYMVQTSTFRTDKLVENDFEALLMYFNCNLNHLMSQDDIKILKSLPCYKSISGRYMSIAKFGTCYVLTKSIPSAEVEKWTQLSSSAFLEEKMHLKELYEVLGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSSSEELSEIKEQLFEKLESLLIIHDANGRLKQAKHFYDRTVRVFEVMLPEKLFIPKDFFKKLEQLIKPKNQAAFMTSWVEFLRNIGLKHILSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERMDLLSGNFLKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIREQEGSELGPQEQLEQVLSMLSVNLDPPLDKVISNCRNICNITTLDEDMVKTRARVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDVISTKQYVEVLSRIFKNSEGKQLDPNEMRTVKRVVSGLFKSLQNDSVKVRGDLESVRDLALYLPSQDGRLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGTAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGCNDIYRISEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNSSFLGKIYQIDIGYSEYKIVSSLDLYKFSRPEESSQSRDSAPSTPTSPTEFPAPGLRSIPPLFSGRETPKTPSSKHHSPKKLKANSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDLANEVFKHLQNEINRLEKQAFLDQNSDRASRRPFSTPASRFPSDKFSFQRFYTSWNQEATSHKSERQQQNKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCFLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEYGQQLEGLTNDVHTLEAYGVDGLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFIQQKL", "length": 4579, "header": "tr|A0A287A818-1|A0A287A818_PIG Computationally mapped isoform of Sacsin OS=Sus scrofa OX=9823 GN=SACS PE=4 SV=1 CANONICAL=A0A286ZMI9-1" }, "locus": { "chromosome": "11", "start_pos": 2442117, "end_pos": 2383910, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041028.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041028.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039915.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039915.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 3102, "start_aa": "Thr", "end_pos": 3102, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr3102", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624042", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624042", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1M820-1", "protein_name": "Sacsin", "gene_name": "SACS", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "METQDNRWLRVTVLPGCAGCRTVAVPASWTVRDVKRRLAAETGFPASEQKLWLGGRQLSDWIKIGDLTSQNCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTQTLWSKDMAQYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLRDDSKEISELSDQFAPFIGLFGSTKETFVKGSFPGTFFRFPLRRQPSQLSGTLYNKQKVLELFESFQADADTVLLFLKNVQDVSLHVREADGSEKLVFRVTAREPAAPAPERPGAVEALGAALSDYCERVPSGGVTCVTYPVSIVLEDGDAQGARETSWLVCNSVGGRGLSAQLDALADELRFVPVIGIATPLSGLAEEHGAAGFSGKAFCFLPLPPGEESRTGLPVHVSGFFGLTDNRRSIKWRELDQWRDPAAVWNELLVLSVVPRAYAALILDAVARLRAGCSPGLPLSVAGVYGLWPDAAQVKLPWRPALEPLFQELFQHEVLPSLGGHWVPLEQACFSDLDEGLDYAPAVLRFLQRSGKEVVRVPAHLAAAAQLMASSAGPLTQVTPAWTRQVLRKVGLGGASAPERLHLLEFVLSDQAYSELLGLELLPLQSGAFLPFSSSACDQDVIYIASEEHPRSLFPGLEGRFLLDNLKPHLLAALKEAAQTRGRPCTQLQLLNTDRFARLIKEVMNTFWPGRELIVQWYPCDEDRKHPSVSWLRMVWKHLYVHFSEDLTLFDEMPLIPRTPLEEGQTCVELIRLRAPSLVILDDESEAQLPEFLADVVQKLGGIVLKKLDASIQHPLIKKYIHLPSPSAVLHIMEKMPLQKLCNQVASLLPTHKDALRKFLANLTESSEKEKRIIQELTIFKRINHSSSQGLSSYTRLKGCRVLHPAATLPAGLRLSISVVDSSDEATIRLANLLKVEKVRTTSCLKLILKDIESTFYSQEEVTHLVLWVLENLSSLKSENPNVLDWLTPLKFIQLPPGRLVMASELFDPDIEVLKDLFYDEEEACFPPSAFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQASSCPNQDTLLKKARTLLLVLNKNPALLHSCEGKATLKKIKWVPACKERPPNYPGSLVWKGDLCELCAPPDMCDAAHAILVGSSLPLVESVHVNLEKALGILTKPGINAVLKHFKIVVDWYTSKTFSDEDYYQFQHILLEIYGFMHDHLNEGKDAFRALKFPWVWTGKKFCPLAQAVIKPFHDLDLQPYLHSVPKTMAKFHQLFKACGSIEELTADHISMVIQKVYLKSDQDLSDQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSKNPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRAEVDKVGKFGLGFNSVYHITDIPVIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFMNVFDCQLPLTVEAPYSYSGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQNVTSMYLKYLKIEETNPSLAQDTIVIKKKPCSTKALTAPVISVLKEAAKLMKTCGTSNKKLPAEAPKSSCILQITVEEFHHVFRRIADLQSPLFRGPEDDPAALFEMAKVGQSKKPSDELPQKTVDCTTWLICTCMDTGEALRFSLSESGRRLGLVPCGAVAVLLAEVQDQKWAVRPQAGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVVVKAYLEALSVLRELAASGELTDYTYHTVWPDPDLVHDDFSVICQGFYEDIAHGKGKDLTRVFSDGSMWVSMKNVRFLDDSILKRRDVGPAAFKIFLKYLKKTGSKNLCAVELPSSVKLGFEEAGCKQILLENTFSERQFFSEVFFPNIQEIEAELRDPLMNFVLNEKVDEFSGILRVTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDTKDGRFPYGSTQDYLNPIILIKLVQLGMAKDDILWDDMLERAESVAEINKSDHGAACLRSSILLSLIDEKLKIRDPRAKDFAATYQTIPFLPFLTKPAGFSLDWKGNSFKPETMFAATDLYIAEHQDIVCLLQPILNENSHSFRGCGSVPLAVKEFLGLLRKPTVELVVNQLREVAKSVDDGITLYQENITNACYKYLHEAMMQNDSTKTAVTEKLKTFSFILVENAYVNSEKVAFHLNFEAAPYLYQLPNKYKNNFRELFESVGVRQSFTVEDFALVLESIAQEKETKQVTEENFQLCRRIISEGIWSLIREKKQEFCEKNYGHILLPDTNLKLLPAKSLCYNDCPWIKVKDSTVKYCHADIPREVAVKLGAVPKRHKALERYASNVCFTTLGSEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGRGTKEGNPCKTGQYGVGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSVSPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGALNVLYSVKGNITDGDRLKRKQFHASVIDSVTKKRQLPDIPVQQVTYTMDTEDSEGSLTSWLICNRSGFSSMDKVSKSVVSAHKNQDITLFPRGGVAACITHNYKKPHRVFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDNGVGVRSDWNSSLMTALIAPAYVELLAQLKKRYFSGSDPTLSVLQSTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYSCIHDDMKRLLPVVRAPSIDGSDLHSAVIITWVNMSTSNKTRPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLVDANIPVSYVTPADVRAFLMTFSSPDTNCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDTEESEFEVEGLPLLITLDSVLQTFDAKRPKFLTTYHELIPSRKDLFMNTLYLKYSNILLNCKVAKVFDISSFADLLPSVLPREYKTKSCTKWKDSFASESWLKNAWHFISESMNVKEDQEETKPAFDAVMDTLRDWALLPGTKFTVSANQLVVPEGDVLLPLSLMHIAVFPNAQTDKVFHALMKAGCIQLALNKICSKDSAFVPLLSSHTANIESPTSILKAVHYMVQTSTFRTEKLVENDFEALLMYFNCNLNHLMSQDDIKILKSLPCYKSISGRYMSIAKFGTCYVLTKSIPSAEVEKWTQSSSSAFLEEKIHLKELYELLGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSNVEELSEIKEQLFEKLEGLLIIHDANNRLKQAKHFYDRTVRVFEVMLPEKLFIPKDFFKKLEQLIKPKNQVAFMTSWVEFLRNIGLKHILSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERTDLFVGDFLKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIRFSGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIREQAGSDLGPQEQLEQVLSLLNVNLDPPVDKVINNCRNVCNITTLDEDMVRTRAKVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDVISTKQYVEVLSRIFKNSEGKQLDPNEMRTVKRVVSGLFRSLQNDSVKVRGDLENIRDLALYLPSQDGRLVRSSILVFDDAPHYKSRIQGSIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPRVCQFGALCSLQGRLQLLLSSEQFIAGLVRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPQSRSETFAFLKRFGNAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGCNDIYRISEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNSSFLGKIYQIDIGYSEYKIVSSLDLYKFSRPEESSQSRDSAPSTPTSPTEFLAPGLRSVPPLFPGREGLKTPSSKHHSPKKLKATSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEDHDMANEVFKHLQNEINRLEKQAFLDQNADRASRRTFPTSATRFQSEKFSFQRFYTSWNQEATSHKSERQQQNKEKGPPPAGQTYSQRFFVPPTFKTVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCFLSAKLALIAADYAVRGKSDKDVKPTALAQKIEEYSQQLEGLTNDVHTLEAYGVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFIQQKV", "length": 4578 }, "evidence": [ { "id": "A0A286ZMI9", "url": "https://omabrowser.org/oma/group/A0A286ZMI9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V0XRW6-1", "protein_name": "Sacsin", "gene_name": "SACS", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLGWKGPQEIIESNRLVKQLPYSRSYRLARVTILHGCLGCRTFELPPSADVGDVKARIDAEAGFPAARQRLWHCGRELSDDTKIVDLQKSQNQIFLKLQSEALKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVRFLYDETQYGTETLWSKDMAQYQGPAFYAYNDAIFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPSIFSGDQIGMLDPHQTLFGPHESGQCWNLKEDSKEINELTDQFAPFIGVFGSTKETFKNGNFPGTFFRFPLRLQPSQLSSNVYDKQKVLELFESFRADADTVLLFLKSVQDVSLHVREADGTEKLIFRVTASENKALKHERPNSIKILGTAINQYCKGVPSNSITCVTYHVNIALEDESVKDAQKTSWLVCNCVGGRGMCTELDCLADDLKFVPTIGIAMPLSYNEKDKGAVADFSGRAFCFLPLPPGEESKTGLPVHVSGFFGLTDNRRSIKWRELDQWRDPAALWNDLLVVNIVPKAYSTLILEAIKRMETEENSDFPLSAERIYGLWPDENKIRVPWKPIVVPLFKELLQHTVIYSVSNQWMKVEQVHFSEMDESLEYTQSVLNYLQNSGKQIAKVPANIASAVHFTTCTVKAVKKVTPAVVRQVLRKSGHSGPAEEKLHLLQFVLSDGVYSELIGLELLPLQNGNFISFSSSVSEQDIVYITSEDFPRSLFPGLEGRLLSDDLKPEVLAALKEAAKSRGRPCTQLQLLNPERFTRLIKEVMNSVWPGRDMVVQWYPGLEDKNHPSISWLKMVWKNLYMHFSDDLSALDDMPLIPKTLLEENQTSLELVRFRNPSPVILEDESETQLPDYIADIIEKVGGVVLKKLDVSIQHPLIKKYVHPPLPSAVLQIMEKVSLQKLCNQVSSLPSTHKDALRAFLASLNDVSEKEGRIIQELLIFKKMEKSSDDGVPVYAGLNGSKVLHHTAKIPPGLRFSVPVINSSDEATIRLANLLKIEQLKSTDCLKFIIQDIRSCFYSYDETTQIMQWVLENLTFLKNENTDVIDWLAALRFIRISEEKLMTANELFDPEVELLQNLFYSEEEISFPPAIFTSSDILHSLRQIGLKSEANLEESDIMRVANKIESLHADSNTDCDLLVRKARTLLMILNKNHKLLQSSETKTALKKIKWIPACKERPPNYPGSLVWKGDHCNLCLPPEMCDISHAILVGSSVPLVENVQFDIEKALGISTKPSIKAVLKHFKVVVDWHSSKTFSDEDYYQFQHILLEIYGFMHDHLEEGKEAFKALKFPWVWTGKTFCSLTQAVIKTVPDLDLQPYLHYVPKTMAKFHQLFKCCGSIEQLTPDHVSMVIQKIYLKSEQSLSEQESKQNLHIMLSIIRWLYSNQIPASLHTPMPLYSGKLPYKLVMRPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLNVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSISDIFKELLQNADDANASECNFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFLNITRLGESLKRSEVDKVGKFGLGFNSVYHITDVPIILSREFMIMFDPNVNHIGKHIRDKSNPGIKINWSKQQKRLRKFPNQFKPFIGVFGCQLPLTVESPYSYKGTLFRLSFRTQQEAKVSEVSNTCYNTADIYSLVDEFSICGHRLIIFAQSVNSMVLKYLKIEAEDPGAAQDVVTIKKRVCSSKALTGPNVSVLKEAAKLMKVCSSSNKKLPTETPKSSCILQIVVEEFHHVFRRIADLQSPLFRGAEDDPAAFFEMAKSGQVKRSADELPQKTVDSTTWLICSCMDTGDALKFSLHESGRRLGLVPCGGVAVLLTETQDQKWIVKPNCNNIGEVFCYLPLRIKTGLPLHINGCFAVTSNRKEIWKTDTKGRWNTVFMRHVIVKAYIEALCVLRDMAISGELVDYSYCAVWPDPDSVHDDFSVICQGFYEDIAHMKSKEGIKVFSDGISWVSMKNVRFLDDSILKRPDVGPSAFKIFLKYLKKTGSKNLCAVDLPSWVKTGFEEAGCKHILLENTFSEKQFFSEVFFPNVQEIAAELRDPLMRYVLNEKLEEFSGILRITPCIPCSLDGHPLVTPSRLIHPEGRVAKLYDAEDGRFPYGTTQDYLNPVILVKLVQLGMAKDDILWEDLIERAESVAEINKVDHAAACLRSSIILSLIDEKLKCRDPRAKEFAEKCQTIPFLPFLSKPAGFSLHWKGSDFPPDAMFSATDLFTADHQDIVCLIQPILNENSHSFKGCGALSLAVKEFLGLLKKPAVNLVINQLEEVAKSFDGITLYQENITNACYKHLHEAMLENESTKAMIIEQLTNCSFILVENVYVDPTKVSFHLNFEAAPYLYQLPNKYKNSFRELFESMGVRQSFTVEDFALVLELINQERGTKQLTEENFQLCRRIISEGIWSLIREKKQEFCVKKYGEILLPDTRFALLPAKSLCYNDCPWIKVKDTTVKYCHADIPREVAVKLGAIPKRHKALERYASNICFTTLGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPADRIFDEKWAPLQGPALCVYNNQPFTEDDIRGIQNLGKGTKVGNPCKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSTSPGRMFRDLDADFRTQFSDVLDLYLGDHFKLDNCTMFRFPLRNGEMAKVSEISTVPCSDRMVQNLLDKLRTDGAELLMFLNHMEKISICEIEKTTGALNVLYSVQGKITDGDRLKRKQFHASVIDSVTKKKQLSEIPVQQITYTMDTEDSEGNLTTWLICNRSGFSAMEKVSKSVVSAHKNEDITLFPRGGVAACITHNYKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDNGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGTDPTVSVLQNTPVHAVKDTLKKFLSFFPVNRLDVQPDWYCLVKAVYSCIYEDLKRLLPVMRAPNVDGSDLHSAVIITWVNMSTVNKGRPFFDNLLQDELQHLKNTEYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLVDADIPVTYVTPADVRLFLMTFSFPDSNCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEENEIQIEGLPLLITLDNVLQIFDSKRPKFLTTYHELIPSRKDLFMNTLYLRYNNILLSSDVAKVFDIASFAELLSSVLPREYKTKSCMKWKENFASESWLKNAWHFISESIAVKEEQEDIQEKFDGVVETLKDWTLLPGVKFTVSANHLVVPECDVLLPLSIMHIAVFPNAQSDKVFHALMKTGCIQLALNKICSKDSALVPLLSASTANIDNPSSILKAIQYMVQTSSFRTEKLAESDFEALLMYFNCNLCHLTSQDDIKILKSLPCYKSISGRYISISKYGTCYVLTKSIPSVEVDRWTQSTSSAFLEEKIHLKDLYTVLGCVSVDDLEVYLKHLLPKIESLSYDAKLEHLIYLKNRLSSIEETSEMKEQLFEKLESILIIHDASNRLKPAKYFYDRTVKVFEVMLPEKLFIPQDFFKKLEQITKPKSQAAFLPSWVTFLRHIGLKYIISQQQLLQFAKEISMRANTENWSKETLQNAVDVLLHHIFQERTDLLSGNFLKELSLIPFLCPERAPAEFVRFHPQYQEVNGTLPLIRFNGAQVNPKFKQTDVLQLLWTSCPILPEKATPLSIKEQEGSTLDMQEQLEQVLTMLSVNLDPPLDKVINNCRNICNITTVDEEMVKTRAKILRSIYEFLSTEKREFRFQLRGVSFVMVEEGWKLLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDVISTKQYVEVLGRIFKNSEGKQLDPNEMRTVKRVVSGLFKSLQNDSVKVRNDLENMRDFALYLPSQDGRLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEESPRTCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFAPIPHSKSETFAFLKRYGNAVILLYIQHSDSKDINFLLALAMSLKSATDNLISDTSYLIAMLGCNDIYRISEKLDSLGVKYDSSEPSKLELPTPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDGESPSFLGKIYQIDIGYSEYKIVSSLDLYRFSRPEESSQGRDSTPSTPTSPTEFPAHGLRTIPPLFTGRDSHKTTSSKHHSPKKLKSSSLPEILREVTSVIEQAWKLPESERKKIIRRLYLKWHPDKNADNLDIANEVFKHLQNEINRLEKQAFMDQNTDRASRRTFSSSASRFQSDKFSFQRFYTSWNQEATSHKSERQQYKEKCPSSTGPSFSQRFFVPPTFRSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIAADYAVKGKSDKDVKPAALAQKIEEYSQQLEGLANDVQTLEAYGVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFIQQKV", "length": 4599 }, "evidence": [ { "id": "A0A286ZMI9", "url": "https://omabrowser.org/oma/group/A0A286ZMI9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A1D3-1", "protein_name": "Sacsin", "gene_name": "Sacs", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTEETRWVRVTVLRGCVGCRTVAVRATATGRDLKERIFAETGFPVAEQRLWRGDREIPDWIKIGDLTSKTCLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDIKEINELPDQFAPFIGVFGSTKETFTNGSFPGTFFRFPLRLQPSQLSSNLYTKQKVLELFDSFRADADTVLLFLKSVQAVSLHVREADGTEKLVFRVTASENKTLKHERPNSIKILGTAISNYCKKIPSNSVTCVTYHINIALEDESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGLAMSLSGRDEENGATSDFSGKAFCFLPLPPGEESRTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNQFLIVNVVPKAYATLILDSIKRLETEKSSDFPLSVDAIYKLWPEASKVKAHWHPVLGPLFSELFQHAVIYSVGGEWVKLEQVHFSELDESLESTQSVLNYLQRSGKQIARVPGNLAAAVQLSAASATSTASPVRKVTPVWVRQVLRKCAHLGSAEEKLHLLEFVLSDQAYSELLGLELLPLQSGAFVPFSSSVSDQDVVYITSEEFPRSLFPGLEARLILENLKPHLLAALKEAAQTRAQQLLWGYSGRPCTQLQLLNPERFARLIKEVMNTFWPGRELVVQWYPLSEDKHHPSISWLKMVWKNLYIHFSEDLTLFDEMPLIPRTPLDADQTCVELIRLRVPSVVILDDETEAQLPEFLADIVQKLGGIVLKRLDTSLQHPLVKKYIHSPLPSAILQIMEKIPLQKLCNQIASLLPTHKDALRKFLASLTDTSEKEKRIIQELTIFKRINHSSDQGISSYTKLKGCKVLDHTAKLPTELRLSVSVIDSSDEATIRLANMLKIEKLKTTSCLKFVLKDIENAFYTQEEVTRLMLWILENLSSLKNENPSVLDWLMPLKFIHMSQEHVVAASDLFDPDIEVLRDLFYNEEEACFPPAVFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVSSCQNQDVLLKKAKTLLLVLNKNHTLLQSSEGKMALKKIKWVPACKERPPNYPGSLVWKGDLCNLCAPPDMCDAAHAVLVGSSLPLVESAHVSLEKTLGIFTKPTISAVLKHFKIVVDWYTSKTFSDEDYYQFQHILLEIYGFMHDHLSEGKDSFKALKYPWVWTGKNFCPLAQAVIKPIHDLDLQPYLYNVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYLKSDQELSEEESKQNLHLMLNIMRWLYSNQIPASPNTPVPIYHSKNPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFINITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLAVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVNSMYLKYLKIEETNPTLAQDTIIIKKKACPSKALNAPVLSVLKEAAKLMKTCSSSNKKLPTDVPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPATLFEMAKSGQSKKPSDELPQKTVDCTTWLICTCMDTGEALKFSLNESGRRLGLVPCGAVGVLLHETQEQKWTVKPHIGEVFCYLPLRIKTGLPIHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVIVKAYLQALSVLRDLAISGELIDYTYYAVWPDPDVVHDDFSVICQGFYEDIAHGKGKDLTRVFSDGSMWVSMKNVRFLDDSILQRKDVGSAAFKIFLKYLKKTGSKNLCAVELPSSVKVGFEEAGCKQILLENTFSEKQFFSEVFFPNIQEIEAELRDPLMNFVLNEKLDEFSGILRVTPCVPCSLEGHPLVLPSRLIHPEGRVAKLFDIKDGRFPYGSTQDYLNPIILIKLVQLGMAKDDILWDDMLERAESVAEINKSDHAAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQTIPFLPFLTKPAGFSLEWKGNSFKPETMFAATDLYTAEYQDIVCLLQPILNENSHSFRGCGSVSLAVKEFLGLLKKPTVDLVINQLKQVAKSVDDGITLYQENITNACYKYLHEAILQNEMAKATIIEKLKPFCFILVENVYVESEKVSFHLNFEAAPYLYQLPNKYKNNFRELFESVGVRQSFTVEDFALVLESIDQERGKKQITEENFQLCRRIISEGIWSLIREKRQEFCEKNYGKILLPDTNLLLLPAKSLCYNDCPWIKVKDSSVKYCHADIPREVAVKLGAIPKRHKALERYASNICFTAPGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPCKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSVSPGRMFRDLDADFRTQFSDVLDLYLGNHFKLDNCTMFRFPLRNAEMAQVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGGLNVLYSVKGKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTEDSEGNLTTWLICNRSGFSSMDKVSKSVISAHRNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDNGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGSDPTLSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYSCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSNKTKPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLVDAAIPVSYVTPADVRSFLMTFSSPDTNCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEESEFEVEGLPLLITLDSVLQIFDGKRPKFLTTYHELIPSRKDLFMNTLYLKYSSVLLNCKVAKVFDISSFADLLSSVLPREYKTKNCAKWKDNFASESWLKNAWHFISESVSVTDDQEEPKPAFDVIVDILKDWALLPGTKFTVSASQLVVPEGDVLIPLSLMHIAVFPNAQSDKVFHALMKAGCIQLALNKICSKDSALVPLLSCHTANIDSPASILKAVHYMVQTSTFRTEKLVENDFEALLMYFNCNLSHLMSQDDLKILKSLPCYKSISGRYMSIAKFGTCYVLTKSIPSAEVEKWTQSSSSAFLEEKVHLKELYEVLGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLASIEELSETKEQLFEKLESLLIIHDANNRLKQAKHFYDRTVRVFEVMLPEKLFIPKEFFKKLEQVIKPKNQVVFMTSWVEFLRNIGLKHVLSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERTDLLSGNFLKELSLIPFLCPERAPAEYIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIKEQEGSSLAPQEQLEQVLNMLNVNLDPPLDKVINNCRNICNITTLDEEMVKTRAKVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYEADFKPYLYKLPLELGTFHQLFKHLGTEDIISTKQYVEVLSRIFKNSEGKQLDPNEMRTVKRVVSGLFKSLQNDSVKVRSDLENARDLALYLPSQDGRLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGNAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGCNDIYRISEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNASFLGKIYQIDIGYSEYKIVSSLDLYKFSRPDESSQSRDSAPTTPTSPTEFLTPGLRSIPPLFSGKESHKPASSKHHSPRKLKVNALPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTFSTSASRFQSDKYSFQRFYTSWNQEATSHKSERQQQSKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEYSQQLEGLTNDVHTLEAYGVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFIQQKV", "length": 4590 }, "evidence": [ { "id": "A0A286ZMI9", "url": "https://omabrowser.org/oma/group/A0A286ZMI9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9JLC8-1", "protein_name": "Sacsin", "gene_name": "Sacs", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METKFQRWVRVTVLRGCVGCRTVAVPATATGRDLKERIFAETSFPVAEQRLWRGDREVPDWIKIGDLTSKTCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAQYQGSALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDIKEINELPDQFAPFIGVFGSTKETFTNGSFPGTFFRFPLRLQPSQLSSNLYTKQKVLELFDSFRADADTVLLFLKSVQAVSLHVREADGTEKLVFRVTASENKALKHERPNSIKILGTAISNYCKKIPSNSVTCVTYHINIVLEDESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGLAMPLSGKDEENGAISDFSGKAFCFLPLPPGEESRTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNEYLIVNVVPKTYATLILDSIKRLETEKSSDFPLSVDTIYKLWPEASKVKAHWHPVLGPLFSELFQHAVIYSIGGEWVKLEQVHFSELDGSLESTRSVLNYLQSSGKQIAKVPGNLAAAVQLSAASATSSASPVRKVTPAWVRQVLRKCAHLGSAEEKLHLLEFVLSDQAYSELLGLELLPLQSGAFVPFSSSVSDQDVVYITSEEFPRSLFPGLEARLILENLKPHLLAALKEAAQTRGRPCTQLQLLNPERFARLIKEVMNTFWPGRELVVQWYPFSEDKRHPSLSWLKMVWKNLYIHFSEDLTLFDEMPLIPRTLLNEDQTCVELIRLRIPSVVILDDETEAQLPEFLADIVQKLGGIVLKRLDTSIQHPLVKKYIHSPLPSAILQIMEKIPLQKLCNQIASLLPTHKDALRKFLASLTDTSEKEKRIIQELTIFKRINHSSDQGISSYTKLKGCKVLDHTAKLPTDLRLSVSVIDSSDEATIRLANMLKIEKLKTTSCLKFVLKDIGNAFYTQEEVTQLMLWILENLSSLKNENSNVLDWLMPLKFIHMSQGHVVAAGDLFDPDIEVLRDLFYNEEEACFPPTIFTSPDILHSLRQIGLKNESSLKEKDVVQVARKIEALQVSSCQNQDVLMKKAKTLLLVLNKNQTLLQSSEGKMALKKIKWVPACKERPPNYPGSLVWKGDLCNLCAPPDMCDAAHAVLVGSSLPLVESVHVNLEQALSIFTKPTINAVLKHFKTVVDWYTSKTFSDEDYYQFQHILLEIYGFMHDHLSEGKDSFKALKFPWVWTGKNFCPLAQAVIKPTHDLDLQPYLYNVPKTMAKFHQLFKACGSIEELTSDHISMVIQKVYLKSDQELSEEESKQNLHLMLNIMRWLYSNQIPASPNTPVPIYHSRNPSKLVMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSEFSDSDFLNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLAVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVNSMYLKYLKIEETNPSLAQDTIIIKKKVCPSKALNAPVLSVLKEAAKLMKTCSSSNKKLPTDVPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPATLFEMAKSGQSKKPSDELPQKTVDCTTWLICTCMDTGEALKFSLNESGRRLGLVPCGAVGVLLHETQEQKWTVKPHIGEVFCYLPLRIKTGLPIHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVIVKAYLQALSVLRDLAIGGELTDYTYYAVWPDPDLVHDDFSVICKGFYEDIAHGKGKELTRVFSDGSMWVSMKNVRFLDDSILQRKDVGSAAFKIFLKYLKKTGSKNLCAVELPSSVKAGFEEAGCKQILLENTFSEKQFFSEVFFPNIQEIEAELRDPLMNFVLNEKLDEFSGILRVTPCVPCSLEGHPLVLPSRLIHPEGRVAKLFDTKDGRFPYGSTQDYLNPIILIKLVQLGMAKDDILWDDMLERAESVAEINKSDHAAACLRSSILLSLIDEKLKIKDPRAKDFAAKYQTIPFLPFLTKPAGFSLEWKGNSFKPETMFAATDIYTAEYQDIVCLLQPILNENSHSFRGCGSVSLAVKEFLGLLKKPTVDLVINQLKQVAKSVDDGITLYQENITNACYKYLHEAVLQNEMAKATIIEKLKPFCFILVENVYVESEKVSFHLNFEAAPYLYQLPNKYKNNFRELFESVGVRQSFTVEDFALVLESIDQERGKKQITEENFQLCRRIISEGIWSLIREKRQEFCEKNYGKILLPDTNLLLLPAKSLCYNDCPWIKVKDSTVKYCHADIPREVAVKLGAIPKRHKALERYASNICFTALGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPCKTGHYGIGFNSVYHITDCPSFISGNDILGIFDPHARYAPGATSVSPGRMFRDLDADFRTQFSDVLDLYLGNHFKLDNCTMFRFPLRNAEMAQVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGGLNVLYSVKGKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTEDSEGNLTTWLICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDNGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGSDPTLSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYSCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSNKTRPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLVDADIPVSYVTPADVRSFLMTFSSPDTNCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEESEFEVEGLPLLITLDSVLQIFDGKRPKFLTTYHELIPSRKDLFMNTLYLKYSSVLLNCKVAKVFDISSFADLLSSVLPREYKTKNCAKWKDNFASESWLKNAWHFISESVSVTDDQEEPKPAFDVIVDILKDWALLPGTKFTVSTSQLVVPEGDVLIPLSLMHIAVFPNAQSDKVFHALMKAGCIQLALNKICSKDSALVPLLSCHTANIDSPASILKAVHYMVQTSTFRTEKLMENDFEALLMYFNCNLSHLMSQDDIKILKSLPCYKSISGRYMSIAKFGTCYVLTKSIPSAEVEKWTQSSSSAFLEEKVHLKELYEVLGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLASIEEPSEIKEQLFEKLESLLIIHDANNRLKQAKHFYDRTVRVFEVMLPEKLFIPKEFFKKLEQVIKPKNQAAFMTSWVEFLRNIGLKYALSQQQLLQFAKEISVRANTENWSKETLQSTVDILLHHIFQERMDLLSGNFLKELSLIPFLCPERAPAEYIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIKEQEGSDLAPQEQLEQVLNMLNVNLDPPLDKVINNCRNICNITTLDEEMVKTRAKVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYEADFKPYLYKLPLELGTFHQLFKHLGTEDIISTKQYVEVLSRIFKSSEGKQLDPNEMRTVKRVVSGLFKSLQNDSVKVRSDLENARDLALYLPSQDGKLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGNAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGCNDIYRISEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNTSFLGKIYQIDIGYSEYKIVSSLDLYKFSRPDESSQNRDSAPTTPTSPTEFLTPGLRSIPPLFSGKESHKSPSTKHHSPRKLKVNALPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTFSTSASRFQSDKYSFQRFYTSWNQEATSHKSERQQQSKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEYSQQLEGLTNDVHTLEAYGVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFIQQKV", "length": 4582 }, "evidence": [ { "id": "A0A286ZMI9", "url": "https://omabrowser.org/oma/group/A0A286ZMI9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NZJ4-1", "protein_name": "Sacsin", "gene_name": "SACS", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METKENRWVPVTVLPGCVGCRTVAALASWTVRDVKERIFAETGFPVSEQRLWRGGRELSDWIKIGDLTSKNCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELSDQFAPFVGIFGSTKETFINGNFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLYVREADGTEKLVFRVTSSESKALKHERPNSIKILGTAISNYCKKTPSNNITCVTYHVNIVLEEESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGIAMPLSSRDDEAKGATSDFSGKAFCFLPLPPGEESSTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNEFLVMNVVPKAYATLILDSIKRLEMEKSSDFPLSVDVIYKLWPEASKVKVHWQPVLEPLFSELLQNAVIYSISCDWVRLEQVYFSELDENLEYTKTVLNYLQSSGKQIAKVPGNVDAAVQLTAASGTTPVRKVTPAWVRQVLRKCAHLGCAEEKLHLLEFVLSDQAYSELLGLELLPLQNGNFVPFSSSVSDQDVIYITSAEYPRSLFPSLEGRFILDNLKPHLVAALKEAAQTRGRPCTQLQLLNPERFARLIKEVMNTFWPGRELIVQWYPFDENRNHPSVSWLKMVWKNLYIHFSEDLTLFDEMPLIPRTILEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGFVLKKLDASIQHPLIKKYIHSPLPSAVLQIMEKMPLQKLCNQITSLLPTHKDALRKFLASLTDSSEKEKRIIQELAIFKRINHSSDQGISSYTKLKGCKVLHHTAKLPADLRLSISVIDSSDEATIRLANMLKIEQLKTTSCLKLVLKDIENAFYSHEEVTQLMLWVLENLSSLKNENPNVLEWLTPLKFIQISQEQMVSAGELFDPDIEVLKDLFCNEEGTYFPPSVFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQVGACPDQDVLLKKAKTLLLVLNKNHTLLQSSEGKMTLKKIKWVPACKERPPNYPGSLVWKGDLCNLCAPPDMCDVGHAILIGSSLPLVESIHVNLEKALGIFTKPSLSAVLKHFKIVVDWYSSKTFSDEDYYQFQHILLEIYGFMHDHLNEGKDSFRALKFPWVWTGKKFCPLAQAVIKPIHDLDLQPYLHNVPKTMAKFHQLFKVCGSIEELTSDHISMVIQKIYLKSDQDLSEQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSKNPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVKSMYLKYLKIEETNPSLAQDTVIIKKKSCSSKALNTPVLSVLKEAAKLMKTCSSSNKKLPSDEPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELSQKTVECTTWLLCTCMDTGEALKFSLSESGRRLGLVPCGAVGVQLSEIQDQKWTVKPHIGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVIVKAYLQVLSVLRDLATSGELMDYTYYAVWPDPDLVHDDFSVICQGFYEDIAHGKGKELTKVFSDGSTWVSMKNVRFLDDSILKRRDVGSAAFKIFLKYLKKTGSKNLCAVELPSSVKLGFEEAGCKQILLENTFSEKQFFSEVFFPNIQEIEAELRDPLMIFVLNEKVDEFSGVLRVTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDIKDGRFPYGSTQDYLNPIILIKLVQLGMAKDDILWDDMLERAVSVAEINKSDHVAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQTIRFLPFLTKPAGFSLDWKGNSFKPETMFAATDLYTAEHQDIVCLLQPILNENSHSFRGCGSVSLAVKEFLGLLKKPTVDLVINQLKEVAKSVDDGITLYQENITNACYKYLHEALMQNEITKMSIIDKLKPFSFILVENAYVDSEKVSFHLNFEAAPYLYQLPNKYKNNFRELFETVGVRQSCTVEDFALVLESIDQERGTKQITEENFQLCRRIISEGIWSLIREKKQEFCEKNYGKILLPDTNLMLLPAKSLCYNDCPWIKVKDTTVKYCHADIPREVAVKLGAVPKRHKALERYASNVCFTTLGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPYKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSISPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKSTGALNVLYSVKGKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTEDSEGNLTTWLICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDNGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGSDPTLSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYNCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSNKTRPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLIDADIPVSYVTPADIRSFLMTFSSPDTNCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEENEIEVEGLPLLITLDSVLQTFDAKRPKFLTTYHELIPSRKDLFMNTLYLKYSNILLNCKVAKVFDISSFADLLSSVLPREYKTKSCTKWKDNFASESWLKNAWHFISESVSVKEDQEETKPTFDIVVDTLKDWALLPGTKFTVSANQLVVPEGDVLLPLSLMHIAVFPNAQSDKVFHALMKAGCIQLALNKICSKDSAFVPLLSCHTANIESPTSILKALHYMVQTSTFRAEKLVENDFEALLMYFNCNLNHLMSQDDIKILKSLPCYKSISGRYVSIGKFGTCYVLTKSIPSAEVEKWTQSSSSAFLEEKIHLKELYEVIGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSSAEELSEIKEQLFEKLESLLIIHDANSRLKQAKHFYDRTVRVFEVMLPEKLFIPNDFFKKLEQLIKPKNHVTFMTSWVEFLRNIGLKYILSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERMDLLSGNFLKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIKEQEGSDLGPQEQLEQVLNMLNVNLDPPLDKVINNCRNICNITTLDEEMVKTRAKVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDIISTKQYVEVLSRIFKNSEGKQLDPNEMRTVKRVVSGLFRSLQNDSVKVRSDLENVRDLALYLPSQDGRLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGNAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGCNDIYRIGEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNSSFLGKIYQIDIGYSEYKIVSSLDLYKFSRPEESSQSRDSAPSTPTSPTEFLTPGLRSIPPLFSGRESHKTSSKHQSPKKLKVNSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTFSTSASRFQSDKYSFQRFYTSWNQEATSHKSERQQQNKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEYSQQLEGLTNDVHTLEAYGVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFMQQKV", "length": 4579 }, "evidence": [ { "id": "A0A286ZMI9", "url": "https://omabrowser.org/oma/group/A0A286ZMI9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of inclusion body assembly", "id": "GO:0090084", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090084", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" }, { "name": "low-density lipoprotein particle receptor binding", "id": "GO:0050750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050750", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" }, { "name": "proteasome binding", "id": "GO:0070628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070628", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" }, { "name": "Hsp70 protein binding", "id": "GO:0030544", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030544", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMI9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1027, "end_pos": 1029, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1247, "end_pos": 1249, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1497, "end_pos": 1499, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1534, "end_pos": 1536, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1545, "end_pos": 1547, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1611, "end_pos": 1613, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1917, "end_pos": 1919, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2182, "end_pos": 2184, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2702, "end_pos": 2704, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2822, "end_pos": 2824, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2830, "end_pos": 2832, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2918, "end_pos": 2920, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3024, "end_pos": 3026, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3052, "end_pos": 3054, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3495, "end_pos": 3497, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3623, "end_pos": 3625, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3682, "end_pos": 3684, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3765, "end_pos": 3767, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3898, "end_pos": 3900, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4225, "end_pos": 4227, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4466, "end_pos": 4468, "annotation": "n_glycosylation_sequon" }, { "start_pos": 939, "end_pos": 941, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZMI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" }, { "id": "PS50910", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50910" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "HEPN", "eco_id": "ECO_0000259", "start_pos": 4460, "end_pos": 4576, "start_aa": "Leu", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZMI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 4315, "end_pos": 4402, "start_aa": "Ile", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZMI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMI9" }, { "id": "PS50053", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50053" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like", "eco_id": "ECO_0000259", "start_pos": 9, "end_pos": 67, "start_aa": "Leu", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 3102 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": 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"Protein" ] }, { "id": "A0A286ZMJ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMJ1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RE94", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RE94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RE94-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RE94-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASFGWKRKIGEKVSKVTSQQFEAEAADEKDAVENDEGNWLQAVKRRKEILLEGCAEKSKQLKDEGANLAENKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMFPAVHAAEMAVQRNPHSWESWQTLGRAQLGLGEIVLAIRSFQIALHIYPMNPEIWKEDLSWARTLQEQQKVAQRIKKSEAPTEVTHFSPKSIPDYDFESDEIVAVCAAIAEKQKTVSANKTMVIVSASGTVETVTEKEDGAAPPDGSVFIKAR", "length": 262, "header": "tr|A0A286ZMJ1-1|A0A286ZMJ1_PIG Isoform 1 of Tetratricopeptide repeat domain 33 OS=Sus scrofa OX=9823 GN=TTC33 PE=4 SV=3 CANONICAL=A0A286ZMJ1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMJ1-1", "url": 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"sequence": { "sequence": "MASFGWKRKIGEKVSKVTSQQFEAEAADEKDAVENDEGNWLQAVKRRKEILLEGCAEKSKQLKDEGANLAENKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMFPAVHAAEMAVQRNPHSWESWQTLGRAQLGLGEIVLERGAHRVAMKMSMKSNIPNSAPAAYGRYQARGRSGAVAANPSNEESKGSKLRLRPTPQHTATPDPSPTEQGQELNPQPLPLSPNRNSQNCCFLIELNLFEKIIKSFRFSCNSAQVCSCTSKCDFHSSETPSVDFRFHFQSACRKQKCIYLQFSAALINLC", "length": 305, "header": "tr|A0A5G2RE94-1|A0A286ZMJ1_PIG Computationally mapped isoform of Tetratricopeptide repeat domain 33 OS=Sus scrofa OX=9823 GN=TTC33 PE=4 SV=1 CANONICAL=A0A286ZMJ1-1" }, "locus": { "chromosome": "16", "start_pos": 25734852, "end_pos": 25676159, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084659.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084659.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069157.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069157.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RE94", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RE94" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625161", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625161", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NB44-1", "protein_name": "Tetratricopeptide repeat domain 33", "gene_name": "TTC33", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASFGWKRKIGEKVSRATSQQFEAEAADEKGPGGDEDEDWVHASKRRKEVLLEDCVKKSKRLKDEGASLAENRRYREAIQKWDEALQLTPEDATLYEMKSQVLMSLHEMFPAVHAAEMAVQRNPRSWDAWQTLGRAQLGLGEIALAIRSFQVSLHIFPMNPEVWKEDLSWARKLHEQQKATKTEAVQSQAKGKEIAQASIPDYDFESDEIVAVCAAIAEKEKALSEAKTVVIVSASGTVETVTEKENCTSTPDESVFIRAR", "length": 261 }, "evidence": [ { "id": "A0A286ZMJ1", "url": "https://omabrowser.org/oma/group/A0A286ZMJ1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HHG9-1", "protein_name": "Tetratricopeptide repeat protein 33 isoform X1", "gene_name": "Ttc33", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": 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polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW6" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMW6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 152, "end_pos": 154, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" }, { "start_pos": 27, "end_pos": 29, "annotation": "n_glycosylation_sequon" }, { "start_pos": 376, "end_pos": 378, "annotation": "n_glycosylation_sequon" }, { "start_pos": 460, "end_pos": 462, "annotation": "n_glycosylation_sequon" }, { "start_pos": 490, "end_pos": 492, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZMW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMW6" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 140, "end_pos": 167, "start_aa": "Tyr", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 152, "end_pos": 154 }, { "start_pos": 210, "end_pos": 212 }, { 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0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZMZ6-1", "uniprot_ac": "A0A286ZMZ6", "uniprot_id": "A0A286ZMZ6_PIG", "mass": { "chemical_mass": 111439.0, "monoisotopic_mass": 111439.0 }, "refseq": { "ac": "XP_020931982", "name": "histone deacetylase complex subunit SAP130 isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931982" }, "gene_names": [ { "name": "SAP130", "type": "recommended", "evidence": [ { "id": "A0A286ZMZ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ] }, { "name": "SAP130", "type": "synonym", "evidence": [ { "id": "XP_020931982", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931982" } ] } ], "protein_names": [ { "name": "Sin3A associated protein 130", "type": "synonym", "evidence": [ { "id": "A0A286ZMZ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6/entry#names_and_taxonomy" } ] }, { "name": "histone deacetylase complex subunit SAP130 isoform X4", "type": "synonym", "evidence": [ { "id": "XP_020931982", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931982" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SAP130", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6", "locus": { "chromosome": "15", "start_pos": 59410302, "end_pos": 59312418, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015859", "url": "https://www.ensembl.org/id/ENSSSCG00000015859" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015859", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015859", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100517613", "url": "https://www.ncbi.nlm.nih.gov/gene/100517613", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR024137", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024137", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031963", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031963", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GXVPPLA", "url": "https://omabrowser.org/oma/group/GXVPPLA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13497", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13497", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13497:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13497:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16014", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16014", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020931982", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931982", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZMZ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAV4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDY9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDY9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QDY9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDY9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWA9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWA9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWA9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RQJ0", "url": "https://www.uniprot.org/uniprotkb/F1RQJ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RQJ0-1", "url": "https://www.uniprot.org/uniprotkb/F1RQJ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSRDAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSLQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPEYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPIGTQGIHPATPISTQGLQPAPIGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETISNQNTDQPTIAVPPTAQQPPPTIPTMITAASPPSQPAVALPTIPGAVPITPPITTIAAAPPPSAAVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 1057, "header": "tr|A0A286ZMZ6-1|A0A286ZMZ6_PIG Isoform 1 of Sin3A associated protein 130 OS=Sus scrofa OX=9823 GN=SAP130 PE=3 SV=1 CANONICAL=A0A286ZMZ6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMZ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6/entry#A0A286ZMZ6-1", "sequence": { "sequence": "MSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSRDAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSLQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPEYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPIGTQGIHPATPISTQGLQPAPIGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETISNQNTDQPTIAVPPTAQQPPPTIPTMITAASPPSQPAVALPTIPGAVPITPPITTIAAAPPPSAAVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 1057, "header": "tr|A0A286ZMZ6-1|A0A286ZMZ6_PIG Isoform 1 of Sin3A associated protein 130 OS=Sus scrofa OX=9823 GN=SAP130 PE=3 SV=1 CANONICAL=A0A286ZMZ6-1" }, "locus": { "chromosome": "15", "start_pos": 59408021, "end_pos": 59314239, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043014.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043014.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032956.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032956.1" } ] } }, { "isoform_ac": "A0A5G2QAV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6/entry#A0A5G2QAV4-1", "sequence": { "sequence": "MSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSRDAEVTAREHMGSSSSLQSREEKQEPVVGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSLQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPEYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPIGTQGIHPATPISTQGLQPAPIGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETISNQNTDQPTIAVPPTAQQPPPTIPTMITAASPPSQPAVALPTIPGAVPITPPITTIAAAPPPSAAVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 959, "header": "tr|A0A5G2QAV4-1|A0A286ZMZ6_PIG Computationally mapped isoform of Sin3A associated protein 130 OS=Sus scrofa OX=9823 GN=SAP130 PE=3 SV=2 CANONICAL=A0A286ZMZ6-1" }, "locus": { "chromosome": "15", "start_pos": 59408021, "end_pos": 59314239, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069886.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069886.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061547.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061547.2" } ] } }, { "isoform_ac": "A0A5G2QDY9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6/entry#A0A5G2QDY9-1", "sequence": { "sequence": "MSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSRDAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSLQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPEYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETISNQNTDQPTIAVPPTAQQPPPTIPTMITAASPPSQPAVALPTIPGAVPITPPITTIAAAPPPSAAVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 955, "header": "tr|A0A5G2QDY9-1|A0A286ZMZ6_PIG Computationally mapped isoform of Sin3A associated protein 130 OS=Sus scrofa OX=9823 GN=SAP130 PE=3 SV=1 CANONICAL=A0A286ZMZ6-1" }, "locus": { "chromosome": "15", "start_pos": 59408021, "end_pos": 59314239, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080203.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080203.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061857.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061857.1" } ] } }, { "isoform_ac": "A0A5G2QWA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6/entry#A0A5G2QWA9-1", "sequence": { "sequence": "MSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSRDAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSLQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPEYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPIGTQGIHPATPISTQGLQPAPIGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGAKPKSEIHVSMATPVTVSMETISNQNTDQPTIAVPPTAQQPPPTIPTMITAASPPSQPAVALPTIPGAVPITPPITTIAAAPPPSAAVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 1019, "header": "tr|A0A5G2QWA9-1|A0A286ZMZ6_PIG Computationally mapped isoform of Sin3A associated protein 130 OS=Sus scrofa OX=9823 GN=SAP130 PE=3 SV=1 CANONICAL=A0A286ZMZ6-1" }, "locus": { "chromosome": "15", "start_pos": 59408021, "end_pos": 59314239, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087901.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087901.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066223.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066223.1" } ] } }, { "isoform_ac": "F1RQJ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6/entry#F1RQJ0-1", "sequence": { "sequence": "MSSQQFPRLGTPSTGLSQAPSQIANSGSAGLINPAATVNDESSRDAEVTAREHMGSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASGTPVTVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNTIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSLQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPEYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPIGTQGIHPATPISTQGLQPAPIGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATDGMAVRKTLIPPQPPEVASPRVESSMRSTSGSPRPAGMQKFPDQELNPSRRSNKAESLTASAKPKSEIHVSMATPVTVSMETISNQNTDQPTIAVPPTAQQPPPTIPTMITAASPPSQPAVALPTIPGAVPITPPITTIAAAPPPSAAVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 1081, "header": "tr|F1RQJ0-1|F1RQJ0_PIG Computationally mapped isoform of Sin3A associated protein 130 OS=Sus scrofa OX=9823 GN=SAP130 PE=3 SV=4 CANONICAL=A0A286ZMZ6-1" }, "locus": { "chromosome": "15", "start_pos": 59408021, "end_pos": 59314239, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017270.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017270.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016808.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016808.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 760, "start_aa": "Thr", "end_pos": 760, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr760", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAV4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAV4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LMW0-1", "protein_name": "Sin3A associated protein 130", "gene_name": "Sap130", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSQQFPRLGTPSPGLSQAPSQIASSGSTGLINQVATVNEEAGRDADVGTREHVGPSSSLPPREEKQEPVVVRPYPQVQMLPAHHAVASATPVAVTAPPAHLTPAVTLSFSEGLMKPSPKPTMPSRPIAPAPPSTMSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSSAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHLIHQPIQSRPPVSTSSTIPPAVVATVSATRAQSPVITTTAAHAADSALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTLPSATTAGSVSHTQAPTSTIVTMTMPSSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPDYPSERSSLIPISGHRASPNPVAMETRNDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSTITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTSGIQPAPIGTQGIHSAAPINTQGLQPAAMGNQQPQPEGKTSVVLADGATIVANPITSPFSAAPAATTVVQTHSQSASTNTPAQGSSPRPSILRKKPATDGMAVRKTLLPPQPPDVASPRVESSMRSASGSPRPAGTKPKSEVHVSIATPVTVSLETISNQNAEQPTVAVPPTAQQPPPTIPSMIAAASPPSQPAIALSTIPGAVPITPPVTTIAAAPTPSAPVGGTPPTVLGPPIPEIKVKEEVEPVDITRPVSTVPPLATNTVSPSLALLASNLSMPPSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 1057 }, "evidence": [ { "id": "A0A286ZMZ6", "url": "https://omabrowser.org/oma/group/A0A286ZMZ6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BIH0-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "Sap130", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQQFPRLGTPSPGLSQPPSQIASSGSAGLINQVATVNDEAGRDADVGTREHVGPSSSLPPREEKQEPVVVRPYPQVQMLPAHHAVASATPVAVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTMSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHLIHQPIQSRPPVTTSSTIPPAVVATVSATRAQSPVITTTAAHAADSTLSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTLPSTTTAGSVSHTQAPTSTIVTMTMPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPDYPPERSSLIPISGHRASPNPVAMETRNDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSTITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTSGIQPAPIGTPGIHSAAPINTQGLQPAAMANQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNTPAQGSSPRPSILRKKPATDGMAVRKTLLPPQPPDVATPRVESSMRSASGSPRPAGAKPKSEVHVSIATPVTVSLETISNQNAEQPTVAVPPTAQQPPPTIPSMIAAASPPSQPAIALSTIPGAVPVTPPITTIAATPTLSAPVGGTPSTVLGPPVPEIKVKEEAEPVDITRPVSTVPPLATNTVSPSLALLASNLSMPPSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSAAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 1057 }, "evidence": [ { "id": "A0A286ZMZ6", "url": "https://omabrowser.org/oma/group/A0A286ZMZ6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGPPRHPQAGEIEAGGAGGGRRLQVEMSSQQFPRLGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGRDSEVSAREHMSSSSSLQSREEKQEPVVVRPYPQVQMLSTHHAVASATPVAVTAPPAHLTPAVPLSFSEGLMKPPPKPTMPSRPIAPAPPSTLSLPPKVPGQVTVTMESSIPQASAIPVATISGQQGHPSNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQSPVITTTAAHATDSALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTVPSHSSHATAVTTSNIPVAKVVPQQITHTSPRIQPDYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASHARHIQGIQPAPISTQGIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGTQQPQPEGKTSAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGSSPRPSILRKKPATDGAKPKSEIHVSMATPVTVSMETVSNQNNDQPTIAVPPTAQQPPPTIPTMIAAASPPSQPAVALSTIPGAVPITPPITTIAAAPPPSVTVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV", "length": 1048 }, "evidence": [ { "id": "A0A286ZMZ6", "url": "https://omabrowser.org/oma/group/A0A286ZMZ6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Sin3-type complex", "id": "GO:0070822", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070822", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMZ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1042, "end_pos": 1044, "annotation": "n_glycosylation_sequon" }, { "start_pos": 827, "end_pos": 829, "annotation": "n_glycosylation_sequon" }, { "start_pos": 863, "end_pos": 865, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZMZ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMZ6" }, { "id": "PF16014", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16014" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Histone deacetylase complex subunit SAP130 C-terminal", "eco_id": "ECO_0000259", "start_pos": 635, "end_pos": 1040, "start_aa": "Ala", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 760 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1042, "end_pos": 1044 }, { "start_pos": 827, "end_pos": 829 }, { "start_pos": 863, "end_pos": 865 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A286ZN10-1" }, "locus": { "chromosome": "13", "start_pos": 21872803, "end_pos": 21871818, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025520.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025520.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032971.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032971.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN10", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN10" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN10", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN10" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN10", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN10" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN10", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN10" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 106, "end_pos": 108, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZN10-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 144, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZN10-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZN10" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZN10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN10" }, { "id": "PS50021", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50021" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Calponin-homology (CH)", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 139, "start_aa": "Ala", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 106, "end_pos": 108 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZN11-1", "uniprot_ac": "A0A286ZN11", "uniprot_id": "A0A286ZN11_PIG", "mass": { "chemical_mass": 193517.0, "monoisotopic_mass": 193517.0 }, "refseq": {}, "gene_names": [ { "name": "TNRC6B", "type": "recommended", "evidence": [ { "id": "A0A286ZN11", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11" } ] } ], "protein_names": [ { "name": "Trinucleotide repeat containing adaptor 6B", "type": "synonym", "evidence": [ { "id": "A0A286ZN11", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TNRC6B", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11", "locus": { "chromosome": "5", "start_pos": 8063985, "end_pos": 8311429, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000078", "url": "https://www.ensembl.org/id/ENSSSCG00000000078" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000078", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000078", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12712", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12712", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019486", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019486", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032226", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032226", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034925", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034925", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052068", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052068", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR13020", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13020", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13020:SF32", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13020:SF32", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10427", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10427", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16608", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16608", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-426496", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-426496", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZN11", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZN11-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VVU7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VVU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VVU7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MREKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSAAPGANPTNAQVTGTLLPSESGPAPESTLGGAAASNYANSTWGPGASSNNGASPNPIHIWDKVIVDGSDMEEWPCIASKDTESSSENTTDNNSASNPGSEKSALPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKAKSVQSSSSTTESNNGLGNWRNGSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGNSRKGALETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTASGQSNSGNNGNNGKDREDSWKGASVQKSTGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPAHPDCQAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELSASTEWKDPKNTGGWNDYKNNNSSNWGAGRPDEKTSSSWNETPSKDQGWGGGRQPSQGWTSGKNGWGEEVDQAKNSNWESSVSKPVSGWGEGGQNEIGTWGNGGNASLASKGGWEDCKRSPAWTETGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWGGPAPPPPGNGRPSNSNWSSGPQPVTPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGPAPREPNLPTPMTGKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGTAPSNAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVWNTAGSQGSASSHNSASWGQGGKKQMKNSLKGGNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLPDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKLSPSGSTLPNVSLGAIGTGLNPQNFAARQGGNHGLFGNSTAQSRGVHTPVQPLNSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASGSTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETSQTQSDPVGPALNLFGGSTGLGQWSSSAGGGSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI", "length": 1832, "header": "tr|A0A286ZN11-1|A0A286ZN11_PIG Isoform 1 of Trinucleotide repeat containing adaptor 6B OS=Sus scrofa OX=9823 GN=TNRC6B PE=3 SV=2 CANONICAL=A0A286ZN11-1" }, "isoforms": [ { "isoform_ac": "A0A286ZN11-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11/entry#A0A286ZN11-1", "sequence": { "sequence": "MREKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSAAPGANPTNAQVTGTLLPSESGPAPESTLGGAAASNYANSTWGPGASSNNGASPNPIHIWDKVIVDGSDMEEWPCIASKDTESSSENTTDNNSASNPGSEKSALPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKAKSVQSSSSTTESNNGLGNWRNGSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGNSRKGALETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTASGQSNSGNNGNNGKDREDSWKGASVQKSTGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPAHPDCQAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELSASTEWKDPKNTGGWNDYKNNNSSNWGAGRPDEKTSSSWNETPSKDQGWGGGRQPSQGWTSGKNGWGEEVDQAKNSNWESSVSKPVSGWGEGGQNEIGTWGNGGNASLASKGGWEDCKRSPAWTETGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWGGPAPPPPGNGRPSNSNWSSGPQPVTPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGPAPREPNLPTPMTGKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGTAPSNAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVWNTAGSQGSASSHNSASWGQGGKKQMKNSLKGGNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLPDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKLSPSGSTLPNVSLGAIGTGLNPQNFAARQGGNHGLFGNSTAQSRGVHTPVQPLNSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASGSTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETSQTQSDPVGPALNLFGGSTGLGQWSSSAGGGSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI", "length": 1832, "header": "tr|A0A286ZN11-1|A0A286ZN11_PIG Isoform 1 of Trinucleotide repeat containing adaptor 6B OS=Sus scrofa OX=9823 GN=TNRC6B PE=3 SV=2 CANONICAL=A0A286ZN11-1" }, "locus": { "chromosome": "5", "start_pos": 8200256, "end_pos": 8064535, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038352.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038352.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032960.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032960.2" } ] } }, { "isoform_ac": "A0A4X1VVU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN11/entry#A0A4X1VVU7-1", "sequence": { "sequence": "MQTNEGEVSEESSSKVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSAAPGANPTNAQVTGTLLPSESGPAPVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGTAPSNAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVWNTAGSQGSASSHNSASWGQGGKKQMKNSLKGGNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLPDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNSTAQSRGVHTPVQPLNSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASGSTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETSQTQSDPVGPALNLFGGSTGLGQWSSSAGGGSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16266", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16266:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16266:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00439", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00439", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25313", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25313", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25437", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25437", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZN34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZN34-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZT36", "url": "https://www.uniprot.org/uniprotkb/A0A286ZT36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZT36-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZT36-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAPTQIEAELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGREHRRSFEDLVAANAHIPPDYLLKICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNITSARQLTGCSRFSHIFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLPSGEDKVTKLKVTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENCKDEQLIPQLGYVANALRNPNMDISSSPNIGLRRSGQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEECRTAKGDIEISLYTVEKKKKPSYTTQRNDYQPSCGRSLRRTQRKRQHTYQTRSNIEHNSQASCQNSGVQEDSNSSSEEDETVGTSDASVEDPIIEWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQATRKICSSSEEENLKSLEERQKKPKQTRKKGGLVSMAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAEELNSTDAEEDTEIVDLDSDGPGTSSGRRVKCRGRRQSLKCNPDAWRKQCKELLGLIYEREDSEPFRQPSDHLSYPGHQEQEDESSESVIPERQQDPPVGEDYQDVIDTPMDFSTVKETLEAGNYGSPLEFYKDVRQIFSNSKAYTSNKKSRIYSMTLRLSALFESHIKNIISEYKSAIQSQKRRRPRYRKRLRSSSSSLSSSRAPSPKGKQKLMKLQPKNDQNTSVSYARTSSPFSSPVSDAAEGLSLYLLDDELDGPFSSSSFSGYSRNGNSHDPGKAKSFRNRVLPIKQDHSLDGPLTNGDGREPRTGIKRKLLSASEDESMGREEKEKKETKEKSHLSSSESGELGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQYANGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGRGSSRGATRAKRARIADDEFDTMFSGRFSRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY", "length": 1705, "header": "tr|A0A286ZN34-1|A0A286ZN34_PIG Isoform 1 of Bromodomain and WD repeat-containing protein 3 OS=Sus scrofa OX=9823 GN=BRWD3 PE=4 SV=3 CANONICAL=A0A286ZN34-1" }, "isoforms": [ { "isoform_ac": "A0A286ZN34-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34/entry#A0A286ZN34-1", "sequence": { "sequence": "MAAAPTQIEAELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGREHRRSFEDLVAANAHIPPDYLLKICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNITSARQLTGCSRFSHIFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLPSGEDKVTKLKVTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENCKDEQLIPQLGYVANALRNPNMDISSSPNIGLRRSGQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEECRTAKGDIEISLYTVEKKKKPSYTTQRNDYQPSCGRSLRRTQRKRQHTYQTRSNIEHNSQASCQNSGVQEDSNSSSEEDETVGTSDASVEDPIIEWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQATRKICSSSEEENLKSLEERQKKPKQTRKKGGLVSMAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAEELNSTDAEEDTEIVDLDSDGPGTSSGRRVKCRGRRQSLKCNPDAWRKQCKELLGLIYEREDSEPFRQPSDHLSYPGHQEQEDESSESVIPERQQDPPVGEDYQDVIDTPMDFSTVKETLEAGNYGSPLEFYKDVRQIFSNSKAYTSNKKSRIYSMTLRLSALFESHIKNIISEYKSAIQSQKRRRPRYRKRLRSSSSSLSSSRAPSPKGKQKLMKLQPKNDQNTSVSYARTSSPFSSPVSDAAEGLSLYLLDDELDGPFSSSSFSGYSRNGNSHDPGKAKSFRNRVLPIKQDHSLDGPLTNGDGREPRTGIKRKLLSASEDESMGREEKEKKETKEKSHLSSSESGELGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQYANGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGRGSSRGATRAKRARIADDEFDTMFSGRFSRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY", "length": 1705, "header": "tr|A0A286ZN34-1|A0A286ZN34_PIG Isoform 1 of Bromodomain and WD repeat-containing protein 3 OS=Sus scrofa OX=9823 GN=BRWD3 PE=4 SV=3 CANONICAL=A0A286ZN34-1" }, "locus": { "chromosome": "X", "start_pos": 64403658, "end_pos": 64244887, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058949.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058949.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033042.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033042.3" } ] } }, { "isoform_ac": "A0A286ZT36-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34/entry#A0A286ZT36-1", "sequence": { "sequence": "MHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMTGNNLPSGEDKVTKLKVTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDGIIRELQREQDLRLINEGDVPHFPINRSYSANGALRNPNMDISSSPNIGLRRSGQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEECRTAKGDIEISLYTVEKKKKPSYTTQRNDYQPSCGRSLRRTQRKRQHTYQTRSNIEHNSQASCQNSGVQEDSNSSSEEDETVGTSDASVEDPIIEWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQATRKICSSSEEENLKSLEERQKKPKQTRKKGGLVSMAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAEELNSTDAEEDTEIVDLDSDGPGTSSGRRVKCRGRRQSLKCNPDAWRKQCKELLGLIYEREDSEPFRQPSDHLSYPGHQEQEDESSESVIPERQQDPPVGEDYQDVIDTPMDFSTVKETLEAGNYGSPLEFYKDVRQIFSNSKAYTSNKKSRIYSMTLRLSALFESHIKNIISEYKSAIQSQKRRRPRYRKRLRSSSSSLSSSRAPSPKGKQKLMKLQPKNDQNTSVSYARTSSPFSSPVSDAAEGLSLYLLDDELDGPFSSSSFSGYSRNGNSHDPGKAKSFRNRVLPIKQDHSLDGPLTNGDGREPRTGIKRKLLSASEDESMGREEKEKKETKEKSHLSSSESGELGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQYANGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGRGSSRGATRAKRARIADDEFDTMFSGRFSRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY", "length": 1628, "header": "tr|A0A286ZT36-1|A0A286ZT36_PIG Computationally mapped isoform of Bromodomain and WD repeat-containing protein 3 OS=Sus scrofa OX=9823 GN=BRWD3 PE=4 SV=2 CANONICAL=A0A286ZN34-1" }, "locus": { "chromosome": "X", "start_pos": 64346733, "end_pos": 64244887, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062528.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062528.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034628.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034628.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34" } ], "pmid": "" }, { "name": "cytoskeleton organization", "id": "GO:0007010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007010", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34" } ], "pmid": "" }, { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN34", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1167, "end_pos": 1169, "annotation": "n_glycosylation_sequon" }, { "start_pos": 118, "end_pos": 120, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1387, "end_pos": 1389, "annotation": "n_glycosylation_sequon" }, { "start_pos": 145, "end_pos": 147, "annotation": "n_glycosylation_sequon" }, { "start_pos": 26, "end_pos": 28, "annotation": "n_glycosylation_sequon" }, { "start_pos": 764, "end_pos": 766, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZN34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN34" }, { "id": "PS50014", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50014" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Bromo", "eco_id": "ECO_0000259", "start_pos": 1062, "end_pos": 1132, "start_aa": "Leu", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1167, "end_pos": 1169 }, { "start_pos": 118, "end_pos": 120 }, { "start_pos": 1387, "end_pos": 1389 }, { "start_pos": 145, "end_pos": 147 }, { "start_pos": 26, "end_pos": 28 }, { "start_pos": 764, "end_pos": 766 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZN36-1", "uniprot_ac": "A0A286ZN36", "uniprot_id": "A0A286ZN36_PIG", "mass": { "chemical_mass": 134321.0, "monoisotopic_mass": 134321.0 }, "refseq": { "ac": "XP_020949373", "name": "genetic suppressor element 1 isoform X8", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949373" }, "gene_names": [ { "name": "GSE1", "type": "recommended", "evidence": [ { "id": "A0A286ZN36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36" } ] }, { "name": "GSE1", "type": "synonym", "evidence": [ { "id": "XP_020949373", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949373" } ] } ], "protein_names": [ { "name": "Gse1 coiled-coil protein", "type": "synonym", "evidence": [ { "id": "A0A286ZN36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36/entry#names_and_taxonomy" } ] }, { "name": "genetic suppressor element 1 isoform X8", "type": "synonym", "evidence": [ { "id": "XP_020949373", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949373" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZN36", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GSE1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36", "locus": { "chromosome": "6", "start_pos": 3246764, "end_pos": 3349122, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002664", "url": "https://www.ensembl.org/id/ENSSSCG00000002664" } ] } } ], "crossref": [ { "id": "A0A286ZN36", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZN36", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000002664", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002664", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513153", "url": "https://www.ncbi.nlm.nih.gov/gene/100513153", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR022207", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022207", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR17608", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17608", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR17608:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17608:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12540", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12540", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020949373", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949373", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZN36", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZN36-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APE3", "url": "https://www.uniprot.org/uniprotkb/A0A287APE3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APE3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287APE3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA71", "url": "https://www.uniprot.org/uniprotkb/I3LA71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA71-1", "url": "https://www.uniprot.org/uniprotkb/I3LA71-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKGMSHEPKSPSLGMLSTATRTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRGSSSGRERLIVEPPLPQEKAGGPAIPSHLLSTPYPFGISPSSVVQDSRFPPLNLQRPVHHVVPPSSVTEDYLRSFRPYHTTEDLRVSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPAPGSLPPLHPSAVHLHLSGVRYPPELPHSSLAALHSERMSSLSAERLQMDEELRREREREREREADREREKEREREREKEREREKELEREREKERELERQREQQRAREKELLAAKALEPAFLPVAELHGLRSHATEDRGKPSEQLTPTRAEKLKDAGLQAPKAVQHPLHPAPTPHHPVPSLLSNHGLFSLPGSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPAPAETEHRPESARPGPNRHEPGSRDPPQHFGGPPPLISPKPQHHSVPTALWNPVSLMDSALETRRAPESHALHSHPAPFEPSRPAAVPLVKVERVYGPEKAEEGPRKREATPLDKYQPPAREAGSLEPQAFPHGPGPFLAELEQSAQTVLGQPRASLAQPVPFGELAGPLKPGSPYRPPAPRGPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAQQPPLKLDTSSEKLEFLQLFGLTTQQQKEELLTQKRRKRRRMLRERSPSPPTVQSKRQTPSPRLALSTRYSPDEMNSSPNFEEKKKFLTIFSLAHVSAEKRKDEEKLVELLHAMKQKALSARADPLRSSPRDSPAVSLSEPATQPASLDTEKPVGIAASLPDVPKAPEPARLEPLRPQERGQEPAPTGGEKARLSETPGGRKSLSMLHYIRGPAPKDVPVPLSHSVNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGGAAVLSAEQNHKVDASVHYNIPELQSSSRLPLPQHNGQQEPPAGRKGPLAQEMDPDSEEEEEDGEEEEEEPPRRKWHGIEAIFEAYQEHVEEQNLERQVLQTQCRRLEAQHYSLSLAAEQLSHSMAELRSQKQKIVSERERLQAELDHLRKCLALPAMHWPRGYLKGYPR", "length": 1205, "header": "tr|A0A286ZN36-1|A0A286ZN36_PIG Isoform 1 of Gse1 coiled-coil protein OS=Sus scrofa OX=9823 GN=GSE1 PE=4 SV=2 CANONICAL=A0A286ZN36-1" }, "isoforms": [ { "isoform_ac": "A0A286ZN36-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36/entry#A0A286ZN36-1", "sequence": { "sequence": "MKGMSHEPKSPSLGMLSTATRTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRGSSSGRERLIVEPPLPQEKAGGPAIPSHLLSTPYPFGISPSSVVQDSRFPPLNLQRPVHHVVPPSSVTEDYLRSFRPYHTTEDLRVSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPAPGSLPPLHPSAVHLHLSGVRYPPELPHSSLAALHSERMSSLSAERLQMDEELRREREREREREADREREKEREREREKEREREKELEREREKERELERQREQQRAREKELLAAKALEPAFLPVAELHGLRSHATEDRGKPSEQLTPTRAEKLKDAGLQAPKAVQHPLHPAPTPHHPVPSLLSNHGLFSLPGSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPAPAETEHRPESARPGPNRHEPGSRDPPQHFGGPPPLISPKPQHHSVPTALWNPVSLMDSALETRRAPESHALHSHPAPFEPSRPAAVPLVKVERVYGPEKAEEGPRKREATPLDKYQPPAREAGSLEPQAFPHGPGPFLAELEQSAQTVLGQPRASLAQPVPFGELAGPLKPGSPYRPPAPRGPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAQQPPLKLDTSSEKLEFLQLFGLTTQQQKEELLTQKRRKRRRMLRERSPSPPTVQSKRQTPSPRLALSTRYSPDEMNSSPNFEEKKKFLTIFSLAHVSAEKRKDEEKLVELLHAMKQKALSARADPLRSSPRDSPAVSLSEPATQPASLDTEKPVGIAASLPDVPKAPEPARLEPLRPQERGQEPAPTGGEKARLSETPGGRKSLSMLHYIRGPAPKDVPVPLSHSVNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGGAAVLSAEQNHKVDASVHYNIPELQSSSRLPLPQHNGQQEPPAGRKGPLAQEMDPDSEEEEEDGEEEEEEPPRRKWHGIEAIFEAYQEHVEEQNLERQVLQTQCRRLEAQHYSLSLAAEQLSHSMAELRSQKQKIVSERERLQAELDHLRKCLALPAMHWPRGYLKGYPR", "length": 1205, "header": "tr|A0A286ZN36-1|A0A286ZN36_PIG Isoform 1 of Gse1 coiled-coil protein OS=Sus scrofa OX=9823 GN=GSE1 PE=4 SV=2 CANONICAL=A0A286ZN36-1" }, "locus": { "chromosome": "6", "start_pos": 3297548, "end_pos": 3247758, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042444.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042444.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032867.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032867.2" } ] } }, { "isoform_ac": "A0A287APE3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36/entry#A0A287APE3-1", "sequence": { "sequence": "MKGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRGSSSGRERLIVEPPLPQEKAGGPAIPSHLLSTPYPFGISPSSVVQDSRFPPLNLQRPVHHVVPPSSVTEDYLRSFRPYHTTEDLRVSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPAPGSLPPLHPSAVHLHLSGVRYPPELPHSSLAALHSERMSSLSAERLQMDEELRREREREREREADREREKEREREREKEREREKELEREREKERELERQREQQRAREKELLAAKALEPAFLPVAELHGLRSHATEDRGKPSEQLTPTRAEKLKDAGLQAPKAVQHPLHPAPTPHHPVPSLLSNHGLFSLPGSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPAPAETEHRPESARPGPNRHEPGSRDPPQHFGGPPPLISPKPQHHSVPTALWNPVSLMDSALETRRAPESHALHSHPAPFEPSRPAAVPLVKVERVYGPEKAEEGPRKREATPLDKYQPPAREAGSLEPQAFPHGPGPFLAELEQSAQTVLGQPRASLAQPVPFGELAGPLKPGSPYRPPAPRGPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAQQPPLKLDTSSEKLEFLQLFGLTTQQQKEELLTQKRRKRRRMLRERSPSPPTVQSKRQTPSPRLALSTRYSPDEMNSSPNFEEKKKFLTIFSLAHVSAEKRKDEEKLVELLHAMKQKALSARADPLRSSPRDSPAVSLSEPATQPASLDTEKPVGIAASLPDVPKAPEPARLEPLRPQERGQEPAPTGGEKARLSETPGGRKSLSMLHYIRGPAPKDVPVPLSHSVNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGGAAVLSAEQNHKVDASVHYNIPELQSSSRLPLPQHNGQQEPPAGRKGPLAQEMDPDSEEEEEDGEEEEEEPPRRKWHGIEAIFEAYQEHVEEQNLERQVLQTQCRRLEAQHYSLSLAAEQLSHSMAELRSQKQKIVSERERLQAELDHLRKCLALPAMHWPRGYLKGYPR", "length": 1132, "header": "tr|A0A287APE3-1|A0A287APE3_PIG Computationally mapped isoform of Gse1 coiled-coil protein OS=Sus scrofa OX=9823 GN=GSE1 PE=4 SV=2 CANONICAL=A0A286ZN36-1" }, "locus": { "chromosome": "6", "start_pos": 3297548, "end_pos": 3247758, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038241.2", "url": "https://www.ensembl.org/id/ENSSSCT00000038241.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045926.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045926.2" } ] } }, { "isoform_ac": "I3LA71-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36/entry#I3LA71-1", "sequence": { "sequence": "MAPWCPVAAPPPAARCRPRPRRPPALPPRCASSPNRRRSPESSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRGSSSGRERLIVEPPLPQEKAGGPAIPSHLLSTPYPFGISPSSVVQDSRFPPLNLQRPVHHVVPPSSVTEDYLRSFRPYHTTEDLRVSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPAPGSLPPLHPSAVHLHLSGVRYPPELPHSSLAALHSERMSSLSAERLQMDEELRREREREREREADREREKEREREREKEREREKELEREREKERELERQREQQRAREKELLAAKALEPAFLPVAELHGLRSHATEDRGKPSEQLTPTRAEKLKDAGLQAPKAVQHPLHPAPTPHHPVPSLLSNHGLFSLPGSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPAPAETEHRPESARPGPNRHEPGSRDPPQHFGGPPPLISPKPQHHSVPTALWNPVSLMDSALETRRAPESHALHSHPAPFEPSRPAAVPLVKVERVYGPEKAEEGPRKREATPLDKYQPPAREAGSLEPQAFPHGPGPFLAELEQSAQTVLGQPRASLAQPVPFGELAGPLKPGSPYRPPAPRGPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAQQPPLKLDTSSEKLEFLQLFGLTTQQQKEELLTQKRRKRRRMLRERSPSPPTVQSKRQTPSPRLALSTRYSPDEMNSSPNFEEKKKFLTIFSLAHVSAEKRKDEEKLVELLHAMKQKALSARADPLRSSPRDSPAVSLSEPATQPASLDTEKPVGIAASLPDVPKAPEPARLEPLRPQERGQEPAPTGGEKARLSETPGGRKSLSMLHYIRGPAPKDVPVPLSHSVNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGGAAVLSAEQNHKVDASVHYNIPELQSSSRLPLPQHNGQQEPPAGRKGPLAQEMDPDSEEEEEDGEEEEEEPPRRKWHGIEAIFEAYQEHVEEQNLERQVLQTQCRRLEAQHYSLSLAAEQLSHSMAELRSQKQKIVSERERLQAELDHLRKCLALPAMHWPRGYLKGYPR", "length": 1170, "header": "tr|I3LA71-1|A0A286ZN36_PIG Computationally mapped isoform of Gse1 coiled-coil protein OS=Sus scrofa OX=9823 GN=GSE1 PE=4 SV=4 CANONICAL=A0A286ZN36-1" }, "locus": { "chromosome": "6", "start_pos": 3279198, "end_pos": 3247758, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027946.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027946.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020938.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020938.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 457, "start_aa": "Thr", "end_pos": 457, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr457", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 960, "start_aa": "Thr", "end_pos": 960, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr960", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LA71", "url": "https://www.uniprot.org/uniprotkb/I3LA71" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 849, "end_pos": 851, "annotation": "n_glycosylation_sequon" }, { "start_pos": 92, "end_pos": 94, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZN36-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1205, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZN36-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZN36" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZN36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZN36" }, { "id": "PF12540", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12540" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Genetic suppressor element-like", "eco_id": "ECO_0000259", "start_pos": 726, "end_pos": 866, "start_aa": "Gln", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 457, 960 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 849, "end_pos": 851 }, { "start_pos": 92, "end_pos": 94 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", 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"https://www.uniprot.org/uniprotkb/A0A286ZNG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNG6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MERGDSRGMAPDRGLVSARQRPWQDPGTGTQVGDPGLGPVRARRFLLCLYVVGFLDLLGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGRRPSLLVCLLCSALGYLILGTSTNVFLFALARVPVGIFKHTLSISRALLSDLVTEKERPLVLGQFNTASSVGFILGPMVGGYLTELDGGFYLTAFICSSVFVLNAGLVWLFPWTEVQPNAQNDGLGQGKNRALWGKSDSAVPAGTTAGDRTAGPPWGEVLATLQGLKSLTRPGLWDVYLMRLLMAVAVMLYHSNYVLALEERFEVRPRTAGYLISCSSALGALSGCALGPLLRLYSHSSQRVLLHSSALTSALLLLFSTARSVGVAVACSLLLAFSTSIGRTCLTDLQLTVGGGARAGGTLLGLGQSVTAVGRIIAPLLSGVAQELSPCGPPGLGAALALVAVVIMSLHRPHSGGDNRDAKLKRE", "length": 472, "header": "tr|A0A286ZNG6-1|A0A286ZNG6_PIG Isoform 1 of Major facilitator superfamily domain containing 9 OS=Sus scrofa OX=9823 GN=MFSD9 PE=4 SV=1 CANONICAL=A0A286ZNG6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNG6/entry#A0A286ZNG6-1", "sequence": { "sequence": "MERGDSRGMAPDRGLVSARQRPWQDPGTGTQVGDPGLGPVRARRFLLCLYVVGFLDLLGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGRRPSLLVCLLCSALGYLILGTSTNVFLFALARVPVGIFKHTLSISRALLSDLVTEKERPLVLGQFNTASSVGFILGPMVGGYLTELDGGFYLTAFICSSVFVLNAGLVWLFPWTEVQPNAQNDGLGQGKNRALWGKSDSAVPAGTTAGDRTAGPPWGEVLATLQGLKSLTRPGLWDVYLMRLLMAVAVMLYHSNYVLALEERFEVRPRTAGYLISCSSALGALSGCALGPLLRLYSHSSQRVLLHSSALTSALLLLFSTARSVGVAVACSLLLAFSTSIGRTCLTDLQLTVGGGARAGGTLLGLGQSVTAVGRIIAPLLSGVAQELSPCGPPGLGAALALVAVVIMSLHRPHSGGDNRDAKLKRE", "length": 472, "header": "tr|A0A286ZNG6-1|A0A286ZNG6_PIG Isoform 1 of Major facilitator superfamily domain containing 9 OS=Sus scrofa OX=9823 GN=MFSD9 PE=4 SV=1 CANONICAL=A0A286ZNG6-1" }, "locus": { "chromosome": "3", "start_pos": 51523373, "end_pos": 51511457, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052194.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052194.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033121.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033121.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNG6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNG6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626073", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626073", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZTY6-1", "protein_name": "Major facilitator superfamily domain containing 9", "gene_name": "Slc67a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALGVRGRGASGQDLTSETPVTATASSSAVSSRRFLLWLYLDLFGVSMTVPLLNLHVRSLGVSPVVAGIVGSSYGILQLFSSTFVGCWSDVVGRRCSLLVCILLSALGYLLLGMSTNVFLFTLARVPVGVFKHTLSISRALLSDLVTEKERPLVLGQFNTASGVGFILGPVIGGYLTELDGGFYVTAFMCCSVFLLNAGLVWLLPWRETSLNIPDSGWSLDQKHATVTIKSESTLQGAATTPEARRSGRNLRPPWVEVMSTLKDMKNLIFSALWDVFLVRLLMGVAVMLYYSNFVLALEERFGVRPKTTGYLISYTSALGTLAGFAVGPILRLYKHNSHMVLLHSSALTCLLLLLYSTTNSMAMVVLSSTLLSFSTTIGRTCITDLQLSVGGAQASGTVIGVGQSVTAVGRILAPLLSGLAQEISPCGPPSLGAALALVAILIMTLYRPPFSGDGSERLKRE", "length": 462 }, "evidence": [ { "id": "A0A286ZNG6", "url": "https://omabrowser.org/oma/group/A0A286ZNG6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BAZ5-1", "protein_name": "Major facilitator superfamily domain containing 9", "gene_name": "MFSD9", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRMEPGDQTSGMAPDRGLVSATRRPRQEPGTGTQEGAPGPGAVRARRFLLCLYLVGFLDLFGVSMVVPLLSVHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGRRSSLLVCILCSALGYLLLGASTNVFLFTLARVPAGIFKHTLSISRALLADLVTEEERPVVLGQFNTASSMGFILGPVVGGYLAELDGGFYLTAFVCSSVFVLNAGLVWLFPWSEVKLSGPEDDLPRGRNQALWEKTDSAVQRAASAHGTPASPQGTPVSKGPARLLWAEVLATLWGLRSLVLSALWVVFLVRLLMAVAVMLYYSNFVLALEERFSMGPRAAGYVTSCGSALGVLAGFALGPLLRLYGHQSYRLLLHSSVLTSMLLLLFASARSLDVAVACSVLLSFSTAIGRTCITDLQLTVGGVRAGGSLLGMGQSVTAVGRVLAPILSGVAQEVSPCGPPGLGAALGFVAVVIMSRNRPHSGGQGGDQLKSE", "length": 485 }, "evidence": [ { "id": "A0A286ZNG6", "url": "https://omabrowser.org/oma/group/A0A286ZNG6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3H6H8-1", "protein_name": "Major facilitator superfamily domain-containing protein 9 isoform X4", "gene_name": "Mfsd9", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVVPLLSLHVKSLGVSPVVAGVVGSSYGALQLFSSTFVGCWSDVVGRRSSLLVCILLSALGYLLLGVSTNVFLFTLARVPVGVFKHTLSISRALLSDLVTEKERPLVLGQFNTASGVGFILGPMVGGYLTELDGGFYMTAFICSSVFLLNAGLVWLLPWRETNLHSAENGWSLDQKHATAPRKSEGTLQGAATTPKVRWSEKKVQRPWVEVVSALKDMKSLIFSTLWDIFLVRLLMGVAVMLYYSNFVLALEERFGVRPKTTGYLISYTSALGTLAGFAVGPILRLYKHNSYMVLLHSSALTCLLLLLYSVASTMHVVVFSSTLLSFSTSIGRTCVTDLQLSAGGAQASGTVIGVGQSVTAVGRIIAPLLSGVAQEISPCGPPSLGAALALVAILIMSLNKPHSSGDGSKVLKRE", "length": 415 }, "evidence": [ { "id": "A0A286ZNG6", "url": "https://omabrowser.org/oma/group/A0A286ZNG6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8C0T7-1", "protein_name": "Solute carrier family 67 member A2", "gene_name": "Slc67a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGVPGHGASRQDLASETPVTATAPSSAVSSRRFLLWLYLVGFLDLFGVSMVVPLLNLHVRSLGASPVVAGIVGSSYGVLQLFSSTFVGCWSDVVGRRSSLLVCILLSALGYLLLGMSTNVFLFTLARVPVGVFKHTLSISRALLSDLVTEKERPLVLGQFNTASGVGFILGPVVGGYLTELDGGFYVTAFICCSVFLLNAGLVWLLPWRETSLNIPDNGWSLDGKHTTEPIKSEGTLQGAATTSTARRSERTVQAPWVEVMLALKDMKNLIFSALWDVFLMRLLMGVAVMLYYSNFVLALEERFEVRPKTTGYLISYTSALGTLAGFAVGPILRLYKHNSYMVLLHSSVLTCLLLVVYSTTCSMAMVVFSSTLLSFSTTIGRTCITDLQLSVGGAQASGTVIGVGQSVTAVGRILAPLLSGVAQEISPCGPPSLGAALALVAILIMTLNRPPFSGDGSERLKQE", "length": 466 }, "evidence": [ { "id": "A0A286ZNG6", "url": "https://omabrowser.org/oma/group/A0A286ZNG6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NBP5-1", "protein_name": "Solute carrier family 67 member A2", "gene_name": "SLC67A2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MELGGHWDMNSAPRLVSETAERKQEQKTGTEAEAADSGAVGARRFLLCLYLVGFLDLFGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDVVPEKERPLVIGHFNTASGVGFILGPVVGGYLTELEDGFYLTAFICFLVFILNAGLVWFFPWREAKPGSTEKGLPLRKTHVLLGRSHDTVQEAATSRRARASKKTAQPWVEVVLALRNMKNLLFSEMWDIFLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGAVAGLALGPILRLYKHNSQALLLHSSILTCTLLLLYSLAPTMGAVVLSSTLLSFSTAIGRTCITDLQLTVGGAQASGTLIGVGQSVTAVGRIIAPLLSGVAQEVSPCGPPSLGAVLALVAIFIMSLNKRHSSGDGNSKLKSE", "length": 474 }, "evidence": [ { "id": "A0A286ZNG6", "url": "https://omabrowser.org/oma/group/A0A286ZNG6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNG6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNG6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNG6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNG6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZNG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNG6" }, { "id": "PS50850", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50850" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Major facilitator superfamily (MFS) profile", "eco_id": "ECO_0000259", "start_pos": 45, "end_pos": 461, "start_aa": "Phe", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZNH1-1", "uniprot_ac": "A0A286ZNH1", "uniprot_id": "A0A286ZNH1_PIG", "mass": { "chemical_mass": 9431.0, "monoisotopic_mass": 9431.0 }, "refseq": { "ac": "XP_020922284", "name": "small integral membrane protein 5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922284" }, "gene_names": [ { "name": "SMIM5", "type": "recommended", "evidence": [ { "id": "A0A286ZNH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1" } ] }, { "name": "SMIM5", "type": "synonym", "evidence": [ { "id": "XP_020922284", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922284" } ] } ], "protein_names": [ { "name": "Small integral membrane protein 5", "type": "synonym", "evidence": [ { "id": "A0A286ZNH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1/entry#names_and_taxonomy" } ] }, { "name": "small integral membrane protein 5", "type": "synonym", "evidence": [ { "id": "XP_020922284", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922284" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNH1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SMIM5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1", "locus": { "chromosome": "12", "start_pos": 5757009, "end_pos": 5763754, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038844", "url": "https://www.ensembl.org/id/ENSSSCG00000038844" } ] } } ], "crossref": [ { "id": "A0A286ZNH1", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZNH1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000038844", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038844", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20254", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20254", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625566", "url": "https://www.ncbi.nlm.nih.gov/gene/100625566", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR031671", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031671", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047133", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047133", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625566", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625566", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HCCCCGK", "url": "https://omabrowser.org/oma/group/HCCCCGK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZNH1", "url": "https://www.orthodb.org/?gene=A0A286ZNH1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR37344", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37344", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37344:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37344:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15831", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15831", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020922284", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922284", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZNH1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTAADFVQEMHSVWERLLLKLQRLPQAEPVEIATFSVLVIFAATVVLLLLVAICYCCVQCCCPDRRGRKVQVRPMTPLQGTRR", "length": 83, "header": "tr|A0A286ZNH1-1|A0A286ZNH1_PIG Isoform 1 of Small integral membrane protein 5 OS=Sus scrofa OX=9823 GN=SMIM5 PE=4 SV=1 CANONICAL=A0A286ZNH1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1/entry#A0A286ZNH1-1", "sequence": { "sequence": "MTAADFVQEMHSVWERLLLKLQRLPQAEPVEIATFSVLVIFAATVVLLLLVAICYCCVQCCCPDRRGRKVQVRPMTPLQGTRR", "length": 83, "header": "tr|A0A286ZNH1-1|A0A286ZNH1_PIG Isoform 1 of Small integral membrane protein 5 OS=Sus scrofa OX=9823 GN=SMIM5 PE=4 SV=1 CANONICAL=A0A286ZNH1-1" }, "locus": { "chromosome": "12", "start_pos": 5758105, "end_pos": 5757492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041737.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041737.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033020.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033020.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNH1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625566", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625566", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7KB90-1", "protein_name": "Small integral membrane protein 5", "gene_name": "Smim5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAATDFEEEIRSVTERLLLKLRGLPQADPVEVVAFSIIILFTATVLLLMLLACSYCCVHCCCPERRARKVAVMTIRTR", "length": 78 }, "evidence": [ { "id": "A0A286ZNH1", "url": "https://omabrowser.org/oma/group/A0A286ZNH1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BAR0-1", "protein_name": "Small integral membrane protein 5", "gene_name": "SMIM5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAASKLMQEIHSIGDRLLLKLQRLPQAEPVEILAFSVLVVFTATVVLLLLIACGFCCCQYCWPRRRGRRTQVGPMTPP", "length": 78 }, "evidence": [ { "id": "A0A286ZNH1", "url": "https://omabrowser.org/oma/group/A0A286ZNH1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1C7Q5-1", "protein_name": "Small integral membrane protein 5", "gene_name": "SMIM5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSSEAFLKEMQTIGEKLLLKLQKLPKADPVEIVSFCVVLLFIVTVLVLMIIACSCCCYSCCSCNEGPDHRRRKAQVRPTAHP", "length": 82 }, "evidence": [ { "id": "A0A286ZNH1", "url": "https://omabrowser.org/oma/group/A0A286ZNH1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "M0R3V6-1", "protein_name": "Small integral membrane protein 5", "gene_name": "Smim5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVTDFVEEIRSVGERLLLKLKELPQAEPVELVAFSIIVLFTATVLMLLLIACSWCCAHCCCSEGRDRKIPVRPRKPR", "length": 78 }, "evidence": [ { "id": "A0A286ZNH1", "url": "https://omabrowser.org/oma/group/A0A286ZNH1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q71RC9-1", "protein_name": "Small integral membrane protein 5", "gene_name": "SMIM5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAATDFVQEMRAVGERLLLKLQRLPQAEPVEIVAFSVIILFTATVLLLLLIACSCCCTHCCCPERRGRKVQVQPTPP", "length": 77 }, "evidence": [ { "id": "A0A286ZNH1", "url": "https://omabrowser.org/oma/group/A0A286ZNH1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BT42-1", "protein_name": "Small integral membrane protein 5", "gene_name": "Smim5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAATDFVGEIRSVGERLLLKLQQLPQAEPVELVAFSIIVLFTATVLVLGLIACSCCCAHCCCSESRQRKIPVRPTKPR", "length": 78 }, "evidence": [ { "id": "A0A286ZNH1", "url": "https://omabrowser.org/oma/group/A0A286ZNH1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNH1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNH1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZNH1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 83, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZNH1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZNH1" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939870" }, "gene_names": [ { "name": "ADAT3", "type": "recommended", "evidence": [ { "id": "A0A286ZNI1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" } ] }, { "name": "ADAT3", "type": "synonym", "evidence": [ { "id": "XP_020939870", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939870" } ] } ], "protein_names": [ { "name": "Adenosine deaminase tRNA specific 3", "type": "synonym", "evidence": [ { "id": "A0A286ZNI1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1/entry#names_and_taxonomy" } ] }, { "name": "probable inactive tRNA-specific adenosine deaminase-like protein 3", "type": "synonym", "evidence": [ { "id": "XP_020939870", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939870" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNI1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADAT3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1", "locus": { "chromosome": "2", "start_pos": 76628633, "end_pos": 76634262, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038810", "url": "https://www.ensembl.org/id/ENSSSCG00000038810" } ] } } ], "crossref": [ { "id": "ENSSSCG00000038810", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038810", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01285", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01285", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "102159223", "url": "https://www.ncbi.nlm.nih.gov/gene/102159223", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002125", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002125", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016193", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016193", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102159223", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102159223", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QHWPTSF", "url": "https://omabrowser.org/oma/group/QHWPTSF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZNI1", "url": "https://www.orthodb.org/?gene=A0A286ZNI1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11079", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11079", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11079:SF156", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11079:SF156", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00383", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00383", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939870", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939870", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZNI1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNI1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPALGIMELRGDVKAGSPEGELASWEALPVLSEQQSGDVELVLAYAAPVLDKRQTSRLLKEVSAVHPLPAQPHLKRVRPSRDPSRPHTLEMLLCLAGPAAGTRSLAELLPTPAVDPCGLGQPFLVPVPARPPLTRDQFEEARTHWPTSFHEDRQVTRALAGQLFSAQERAVMQGHMERAVWAAQQAASRGLRAVGAVVVDPASGRVLATGHDCSGTATPLLHAAMVCIDLVAQGQGRGTYDLTHHPACSFAPAAAPESVRVGSVRKLEEDMDGLPYVCTGYDLYVTREPCAMCAMALVHSRVRRVFYGAPSPDGALGTHFRIHARPDLNHRFQAFRGVLEAQCCQLDPDA", "length": 351, "header": "tr|A0A286ZNI1-1|A0A286ZNI1_PIG Isoform 1 of Adenosine deaminase tRNA specific 3 OS=Sus scrofa OX=9823 GN=ADAT3 PE=3 SV=1 CANONICAL=A0A286ZNI1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNI1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1/entry#A0A286ZNI1-1", "sequence": { "sequence": "MDPALGIMELRGDVKAGSPEGELASWEALPVLSEQQSGDVELVLAYAAPVLDKRQTSRLLKEVSAVHPLPAQPHLKRVRPSRDPSRPHTLEMLLCLAGPAAGTRSLAELLPTPAVDPCGLGQPFLVPVPARPPLTRDQFEEARTHWPTSFHEDRQVTRALAGQLFSAQERAVMQGHMERAVWAAQQAASRGLRAVGAVVVDPASGRVLATGHDCSGTATPLLHAAMVCIDLVAQGQGRGTYDLTHHPACSFAPAAAPESVRVGSVRKLEEDMDGLPYVCTGYDLYVTREPCAMCAMALVHSRVRRVFYGAPSPDGALGTHFRIHARPDLNHRFQAFRGVLEAQCCQLDPDA", "length": 351, "header": "tr|A0A286ZNI1-1|A0A286ZNI1_PIG Isoform 1 of Adenosine deaminase tRNA specific 3 OS=Sus scrofa OX=9823 GN=ADAT3 PE=3 SV=1 CANONICAL=A0A286ZNI1-1" }, "locus": { "chromosome": "2", "start_pos": 76629977, "end_pos": 76628925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047042.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047042.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033184.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033184.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNI1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102159223", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102159223", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7GZI0-1", "protein_name": "Probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1", "gene_name": "Adat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVPMCRTLDPVGRTPLRMEPASGPAEQPEPEKAGSEEQETAQWQALPVLSEQQSGAVELVLAYAAPVLDKRQTSRLLREVSAIYPLPAQPHLKRVRPSRSAGGAHASDLLLCLAGPSAGPRSLAELLPRPAVDPRGLGTPFLVPVPARPPLTRSQFEEARAHWPTSFHEDKQVTSALAGQLFSAQARAAMQSHMERAVRAAQRAAGQGLRAVGAVVVDPASDSVLATGHDCSDVASPLLHAVMVCIDLVAQGQGRGTCDLRRHPTCSFTLATTPQGARAGSVRKLDEDDDGMPYVCTGYDLYITREPCVMCAMALVHARIQRVFYGASSPDGALGTRFRVHARPDLNHRFQVFRGILEDQCRQLDPDP", "length": 368 }, "evidence": [ { "id": "A0A286ZNI1", "url": "https://omabrowser.org/oma/group/A0A286ZNI1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F4KH86-1", "protein_name": "tRNA-specific adenosine deaminase TAD3", "gene_name": "TAD3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSDAWEIIHIPEKPSLSPDHQPTVKVYASLIKPRFANTIVRHLCKIAPLEDLRHVKRVKKKILPDCGETQLTVILCLAPEHNDQLSDMPPDVQRLVDPYELSPFITQVCKYAAVSKEEWEEQSKIWPTSFHPPTYNIDGIGGFSEEETQSICKFMRVVIDMAVSGHTPLVNAAVIVDPSVRRIIASETDQVYASSAPRDMTSAETRPFEETGEICLNDTLEKQNGSLSALSCLNPWQWSLQPHDTENCSQWHPLRHASMVAIESSSARDRNLFPNPSKIFDQDHVPPSNTDSPAKKQKTSSQSPDVQNDSREETVRDPSMERPYLCTGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRVLLPDDALRQMTTV", "length": 400 }, "evidence": [ { "id": "A0A286ZNI1", "url": "https://omabrowser.org/oma/group/A0A286ZNI1/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q561R2-1", "protein_name": "tRNA-specific adenosine-34 deaminase regulatory subunit ADAT3", "gene_name": "Adat3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPTSGFAEQPGPEKVESEEQEPAQWQALPVLSEQQSGAVELVLAYAAPVLDKRQTSRLLREVSAVYPLPAQPHLKRVRPSRSAGGAHSSDLLLCLAGPSAGPRSLAELLPRPAVDPRGLGTPFLVPVPARPPLTRSQFEEARAHWPTSFHEDKQVTSALAGQLFSAQARAAMQTHMERAVRAAQRAAAQGLRAVGAVVVDPASDHVLATGHDCCSEASPLLHAVMVCIDLVAQGQGRGSCDLRRHPACSFTQATATQSARAGSVRKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPDGALGTRFRVHARPDLNHRFQVFRGILEDQCRQLDPDP", "length": 349 }, "evidence": [ { "id": "A0A286ZNI1", "url": "https://omabrowser.org/oma/group/A0A286ZNI1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6PAT0-1", "protein_name": "tRNA-specific adenosine-34 deaminase regulatory subunit ADAT3", "gene_name": "Adat3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPTSGFAEQPGPVKAESEEQEPAQWQALPVLSEQQSGAVELILAYAAPVLDKRQTSRLLREVSAVYPLPAQPHLKRVRPSRSAGGAQSSDLLLCLAGPSAGPRSLAELLPRPAVDPRGLGTPFLVPVPARPPLTRSQFEEARAHWPTSFHEDKQVTSALAGQLFSTQERAAMQTHMERAVCAAQRAAAQGLRAVGAVVVDPASDRVLATGHDCSSVASPLLHAVMVCIDLVAQGQGRGSCDLRSHPACSFTQATATQGARAGSVRKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPDGALGTLFRVHARPDLNHRFQVFRGILEDQCRQLDPDP", "length": 349 }, "evidence": [ { "id": "A0A286ZNI1", "url": "https://omabrowser.org/oma/group/A0A286ZNI1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8JFW4-1", "protein_name": "tRNA-specific adenosine-34 deaminase regulatory subunit adat3", "gene_name": "adat3", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEPQAKRKKEMDDYDDTWEVLPVLSDEQSQDPELLPAYAAPILERRETSRLVKELSLIHPLPNLQHIKRVRPCKHKDSPHPLEVIVCLVSDVQCTDPKKVTLSHLLHTQCFNSNGLGDPFIVQIPANPPLTRPQFEKASKHWPTSFHEDKLVTFALKGQLFTAHQKTKMREYMCVAVKAAKSGRELGMDAVGAVIVDPKTEQIIAVAHDCKRGSHPLHHAVMVCIDLVACGQDGGAYNYEKYPACRFSCSNSVCDGKETGLPYICTGYDLYVTREPCVMCAMALVHSRISRVFYGASTADGAFGSRYKIHCQKDLNHRFEVFKGVMVNACEDLCKE", "length": 336 }, "evidence": [ { "id": "A0A286ZNI1", "url": "https://omabrowser.org/oma/group/A0A286ZNI1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q96EY9-1", "protein_name": "tRNA-specific adenosine-34 deaminase regulatory subunit ADAT3", "gene_name": "ADAT3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MILCSRLCLPQSASLRMEPAPGLVEQPKCLEAGSPEPEPAPWQALPVLSEKQSGDVELVLAYAAPVLDKRQTSRLLKEVSALHPLPAQPHLKRVRPSRDAGSPHALEMLLCLAGPASGPRSLAELLPRPAVDPRGLGQPFLVPVPARPPLTRGQFEEARAHWPTSFHEDKQVTSALAGRLFSTQERAAMQSHMERAVWAARRAAARGLRAVGAVVVDPASDRVLATGHDCSCADNPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAPAAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSPDGALGTRFRIHARPDLNHRFQVFRGVLEEQCRWLDPDT", "length": 367 }, "evidence": [ { "id": "A0A286ZNI1", "url": "https://omabrowser.org/oma/group/A0A286ZNI1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNI1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNI1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "tRNA processing", "id": "GO:0008033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008033", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNI1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "catalytic activity", "id": "GO:0003824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003824", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNI1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZNI1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNI1" }, { "id": "PS51747", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51747" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CMP/dCMP-type deaminase", "eco_id": "ECO_0000259", "start_pos": 171, "end_pos": 336, "start_aa": "Ala", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZNJ3-1", "uniprot_ac": "A0A286ZNJ3", "uniprot_id": "A0A286ZNJ3_PIG", "mass": { "chemical_mass": 40633.0, "monoisotopic_mass": 40633.0 }, "refseq": { "ac": "XP_005663100", "name": "protein phosphatase 1 regulatory subunit 42 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663100" }, "gene_names": [ { "name": "PPP1R42", "type": "recommended", "evidence": [ { "id": "A0A286ZNJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3" } ] }, { "name": "PPP1R42", "type": "synonym", "evidence": [ { "id": "XP_005663100", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663100" } ] } ], "protein_names": [ { "name": "Protein phosphatase 1 regulatory subunit 42", "type": "recommended", "evidence": [ { "id": "A0A286ZNJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3/entry#names_and_taxonomy" } ] }, { "name": "Leucine-rich repeat-containing protein 67", "type": "synonym", "evidence": [ { "id": "A0A286ZNJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3/entry#names_and_taxonomy" } ] }, { "name": "protein phosphatase 1 regulatory subunit 42 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005663100", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663100" } ] } ], "function": [ { "annotation": "Regulates phosphatase activity of protein phosphatase 1 (PP1) complexes in the testis.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3#function" }, { "database": "UniProtKB", "id": "ARBA00053544", "url": "https://www.uniprot.org/uniprotkb/ARBA00053544#function" }, { "database": "UniProtKB", "id": "A0A4X1UZ90", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZ90#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPP1R42", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3", "locus": { "chromosome": "4", "start_pos": 67816230, "end_pos": 67772806, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006204", "url": "https://www.ensembl.org/id/ENSSSCG00000006204" } ] } } ], "crossref": [ { "id": "A0A286ZNJ3", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZNJ3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006204", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006204", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21340", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21340", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100154403", "url": "https://www.ncbi.nlm.nih.gov/gene/100154403", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025875", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025875", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050836", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050836", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154403", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154403", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RRFLMNW", "url": "https://omabrowser.org/oma/group/RRFLMNW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZNJ3", "url": "https://www.orthodb.org/?gene=A0A286ZNJ3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1UZ90", "url": "https://www.orthodb.org/?gene=A0A4X1UZ90", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46652", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46652", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46652:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46652:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12799", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12799", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14580", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14580", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005663100", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663100", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZNJ3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNJ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UZ90", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZ90", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UZ90-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZ90-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVRLTLDLIAKNINLKSRKEETISQYLKKITHINFSDKNIDAIDNLSLCKNLSVLYLYDNRISQITNLNYATNLTHLYLQNNCISSMENLRSLKKLEKLYLGGNYIAVIEGLEGLEGLRELHVESQRLPPGEKLLFDPRTLHSLAKSLSILNISNNNIDDIRDLEILENLKQLTAVDNQLLHVKDLEFLLNKLMKLWKMDLNRNPVCLKPKYRDRLILVSKSLEILDGKEIKNMERQFLMNWKASKDAKKISKKRNNKNEDTSNSNIGNFETMHHTVPVYYPQVGKPKLVFFSDIQRYFANGNASPKSIEEDNPKITEEMGNLSLKKSESLLAKIDVHELHPPHNSKVKENL", "length": 352, "header": "tr|A0A286ZNJ3-1|A0A286ZNJ3_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit 42 OS=Sus scrofa OX=9823 GN=PPP1R42 PE=4 SV=1 CANONICAL=A0A286ZNJ3-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNJ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3/entry#A0A286ZNJ3-1", "sequence": { "sequence": "MVRLTLDLIAKNINLKSRKEETISQYLKKITHINFSDKNIDAIDNLSLCKNLSVLYLYDNRISQITNLNYATNLTHLYLQNNCISSMENLRSLKKLEKLYLGGNYIAVIEGLEGLEGLRELHVESQRLPPGEKLLFDPRTLHSLAKSLSILNISNNNIDDIRDLEILENLKQLTAVDNQLLHVKDLEFLLNKLMKLWKMDLNRNPVCLKPKYRDRLILVSKSLEILDGKEIKNMERQFLMNWKASKDAKKISKKRNNKNEDTSNSNIGNFETMHHTVPVYYPQVGKPKLVFFSDIQRYFANGNASPKSIEEDNPKITEEMGNLSLKKSESLLAKIDVHELHPPHNSKVKENL", "length": 352, "header": "tr|A0A286ZNJ3-1|A0A286ZNJ3_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit 42 OS=Sus scrofa OX=9823 GN=PPP1R42 PE=4 SV=1 CANONICAL=A0A286ZNJ3-1" }, "locus": { "chromosome": "4", "start_pos": 67815284, "end_pos": 67782700, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045803.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045803.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033024.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033024.1" } ] } }, { "isoform_ac": "A0A4X1UZ90-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3/entry#A0A4X1UZ90-1", "sequence": { "sequence": "MVRLTLDLIAKNINLKSRKEETISQYLKKITHINFSDKNIDAIDNLSLCKNLSVLYLYDNRISQITNLNYATNLTHLYLQNNCISSMENLRSLKKLEKLYLGGNYIAVIEGLEGLEGLRELHVESQRLPPGEKLLFDPRTLHSLAKSLSILNISNNNIDDIRDLEILENLKQLTAVDNQLLHVKDLEFLLNKLMKLWKMDLNRNPVCLKPKYRDRLILVSKSLEILDGKEIKNMERQFLMNWKASKDAKKISKKRNNKNEDTSNSNIEISL", "length": 271, "header": "tr|A0A4X1UZ90-1|A0A4X1UZ90_PIG Computationally mapped isoform of Protein phosphatase 1 regulatory subunit 42 OS=Sus scrofa OX=9823 GN=PPP1R42 PE=4 SV=1 CANONICAL=A0A286ZNJ3-1" }, "locus": { "chromosome": "4", "start_pos": 67815201, "end_pos": 67782700, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006799.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006799.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006615.3", "url": "https://www.ensembl.org/id/ENSSSCP00000006615.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154403", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154403", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5PTQ4-1", "protein_name": "Protein phosphatase 1 regulatory subunit 42", "gene_name": "PPP1R42", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVRLTTDLIARCLGHRNRREEDLGQHLRKITHLNLSDKNLDAIGDISLCRNLRVLYLYDNQISQIQNLGFASHLTHLYLQNNCISCIENLSSLKKLEKLYLGGNSIAVVEGLDQLQEIRELHIESQHLPLGEKLLFDPGSLRSLAKSLSVLNISNNNIDELEELAVLENLSHLRAADNQLQHMKDLEVVLNKWTKLCSMDLTGNPICHKPKYRDRIVVQSQTLEYLDGKEIKDMERVFLMNWKASRAVRKKSKGRMTNEHADYLHFSAGFETPRPILPSNYSPSLTEKTNILILPEMHKDRRNPLPGTVGKKNKPEENSG", "length": 320 }, "evidence": [ { "id": "A0A286ZNJ3", "url": "https://omabrowser.org/oma/group/A0A286ZNJ3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B1WBU1-1", 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"url": "https://www.ensembl.org/id/ENSSSCP00000033046.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156422", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156422", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9SFS0-1", "protein_name": "Ankyrin repeat domain 34C", "gene_name": "ANKRD34C", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MMDDDTELRTDGNSLLKAVWLGRLRLTRLLLEGGAYINESNDKGETALMVACITKHVDQQSISKSKMVKYLLDNRADPNIQDKSGKTALIHACIRRAGGDVVSLLLENGADPSLEDRTGASALVYAINADDKDALRHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNVPPLPKEEDRQSPPPCASPSEVELKAPGLGSPPSEKEDGFFSLQSGHPSSCNSAKALNEPGSPTRKVGNLKKARLPQLKRLQSEPWGLTAPSVLAASCVRQDETHGVGMDGEVKSIGDVSFPRRGPLSRTSSIDGKDASLVHTVTEQVVKIPVSSASASWKAAYEKTQAPHPRLARRGTLPIDQEKVGICPVGPSALKDTMTLKWLENDLYDLELHPGADLPNPISLESGKGPLDRKKLNSSYLSLFQGSRESLDAVSSTSPNSARRRPPHLLERRGSGTLLLDRISQTRPGFLPPLNVNLNPPIPDIRVSSKPSSPLASGLKSMVPVAPSSPKRVDLRSKKKLLRRHSMQVEQMKQLSDFEETMT", "length": 535 }, "evidence": [ { "id": "A0A286ZNJ4", "url": "https://omabrowser.org/oma/group/A0A286ZNJ4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZI64-1", "protein_name": "Ankyrin repeat domain 34C", "gene_name": "Ankrd34c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMDDDTELRTDGNSLLKAVWLGRLRLTRLLLEGGAYINESNDKGETALMVACITKHVDQQSISKSKMVKYLLDNRADPNIQDKSGKTALIHACIRRAGGEVVSLLLENGADPSLEDRTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNVPPSPKVEDRQSPPLCATPSDVELKASGLSSPPSEKDDDFFILQTGHQSCCSTSKVLNEPGSPTRKVSSLKRARLPQLKRLQSEPWGLIAPSVLAAAARQDETHGTSTDNEVIRSINDLSFPKRGPLSRANSIDSKDPTMFPTVQEQVLKVSSSTPASWKAAYEKGQAPHPRLARRGTLPVDQEKCGMCPPGPSTLKDTASLKMLENDLYDLDIQPGGDPPNSMSLESGKGPLDRKKLNSSHLSLFHGSRESLDAVPSTSPSSVRRRPPHLLERRGSGTLLLDRIAHTRPGFLPPLNVNLNPPIPDIRASNKPASPLASGLKSMVPVAPNSPKRVDLRSKKKLLRRHSMQIEQMKQLSDFEEIMA", "length": 534 }, "evidence": [ { "id": "A0A286ZNJ4", "url": "https://omabrowser.org/oma/group/A0A286ZNJ4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QC31-1", "protein_name": "Ankyrin repeat domain-containing protein 34C", "gene_name": "ankrd34c", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADVLELRTDGNSLLKAVWLRRLRLTRLLLEGGAYINESNDRGETPLMVACMSKHSDQQSVSKAKLVKYLLDNKADPNIQDKAGRSALMHACSHRAGHEVVSLLLTNGADPSLEDRHGSSALVYAVNADDKETLKVLLDACKAKGKEVIIITTDKSPSGTKTTKQYLNVPPSPELDERATPAPCASPSEIDLHASPSPSKEEEKDTVFNFQTKFKSTSSTAAKLPNGLTSPSKKPANPKRARLPQLKRLQSEPWGLIAPSVLAAANEESKRANSDEDVVAGVNGLSLSRRGTLSRHNSVDGKDILFPMMGDQNTKISPTSSLPPSSKASYERSLAQHQPLARRSTVPTEQEASGVNFGPASLRDTVHRRRLGTEHYDSDSQLYSDSSMLDSPKAPLERRKLNTSPLAMLTGSRESLDSNPSTSSPSTARCRAPGLLERRGSGTLLLDYISHTRPGHLPPLNVNPNPPIPDIGASSKPSSPLAAGIRLIAPVAPNSPKRGNLRTKKKLVRRHSMQVEQMKQLSNFEELNHQS", "length": 531 }, "evidence": [ { "id": "A0A286ZNJ4", "url": "https://omabrowser.org/oma/group/A0A286ZNJ4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3GTA8-1", "protein_name": "Ankyrin repeat domain-containing protein 34C", "gene_name": "Ankrd34c", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MMDDDTELRTDGNSLLKAVWLGRLRLTRLLLEGGAYINESNDKGETALMVACITKHVDQQSISKSKMVKYLLDNRADPNIQDKSGKTALIHACIRRAGGEVVSLLLENGADPSLEDRTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNVPPSPKVEDRQSPPLCASPSDIELKAPSLDSPPSEKDDDFFILQSGHQSGCSTSKALNEPGSPTRKVSSLKRARLPQLKRLQSEPWGLIAPSVLAASTRQDETHGTSTDNEIVRSINDISFPKRGPLSRANSIDSKDCTLFPTVQEQVLKVPASAPATWKAAYEKGQAPHPRLARRGTTLPVDQEKAGMCPPGPSALKDPASLKLLENDLYDLDVQPGADPPNTMSLESAKGPLDRKKLNSSHLSLFHGSRECLDAVPSTSPSSVRRRPPHLLERRGSGTLLLDRIAHTRPGFLPPLNVNSNPPIPDIRASSKPAAPLAGGLKSMVPIAPNSPKRVDLRSKKKLLRRHSMQIEQMKQLSDFEEIMT", "length": 535 }, "evidence": [ { "id": "A0A286ZNJ4", "url": "https://omabrowser.org/oma/group/A0A286ZNJ4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P0C6C1-1", "protein_name": "Ankyrin repeat domain-containing protein 34C", "gene_name": "ANKRD34C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMDDDTELRTDGNSLLKAVWLGRLRLTRLLLEGGAYINESNDKGETALMVACITKHVDQQSISKSKMVKYLLDNRADPNIQDKSGKTALIHACIRRAGGEVVSLLLENGADPSLEDRTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNVPPSPKVEDRHSPPLCASPSDIELKALGLDSPLTEKEDDFFSLQAGHPSSCNTSKAVNEPGSPTRKVSNLKRARLPQLKRLQSEPWGLIAPSVLAASTRQDETHGASTDNEVIKSISDISFPKRGPLSRTNSIDSKDPTLFHTVTEQVLKIPVSSAPASWKAAYEKGQAPHPRLARRGTLPVDQEKCGMGPSGPSALKEPASLKWLENDLYDLDIQPGPDPPNSISLESGKGPLDRKKLNSSHLSLFHGSRESLDTVPSTSPSSARRRPPHLLERRGSGTLLLDRISHTRPGFLPPLNVNLNPPIPDIRSSSKPSCSLASGLKSMVPVAPSSPKRVDLRSKKKLLRRHSMQIEQMKQLSDFEEIMT", "length": 535 }, "evidence": [ { "id": "A0A286ZNJ4", "url": "https://omabrowser.org/oma/group/A0A286ZNJ4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BLB8-1", "protein_name": "Ankyrin repeat domain-containing protein 34C", "gene_name": "Ankrd34c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDDDTELRTDGNSLLKAVWLGRLRLTRLLLEGGAYINESNDKGETALMVACITKHVDQQSISKSKMVKYLLDNRADPNIQDKSGKTALIHACIRRAGGEVVSLLLENGADPSLEDRTGASALVYAINADDKDALKHLLDACKAKGKEVIIITTDKSSSGTKTTKQYLNVPPSPKVEDRQSPPLCTTPSDVELKTSGLASPPSEKDDDFFILQTGHQSGCSTSKVLNEPGSPTRKVSSLKRARLPQLKRLQSEPWGLIAPSVLAAATRQDETHGTSTDNEVIRSINDVTFPKRGPLSRTNSIDSKDPTLFPTVQEQVLKVSASTPASWKAAYEKGQAPHPRLARRGTLPLDQEKSGMCPPGPSTLKDPASLKLLENDLYDLDIQPVGDPPNSMSLESGKGPLDRKKLNSSHLSLFHGSRESLEVVPSTSPTSVRRRPPHLLERRGSGTLLLDRIAHTRPGFLPPLNVNLNPPIPDIRASSKPASPLASGLKSMAPVAPNSPKRVDLRSKKKLLRRHSMQIEQMKQLSDFEEIMA", "length": 534 }, "evidence": [ { "id": "A0A286ZNJ4", "url": "https://omabrowser.org/oma/group/A0A286ZNJ4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 221, "end_pos": 223, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" }, { "start_pos": 409, "end_pos": 411, "annotation": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZNJ9-1", "uniprot_ac": "A0A286ZNJ9", "uniprot_id": "A0A286ZNJ9_PIG", "mass": { "chemical_mass": 33090.0, "monoisotopic_mass": 33090.0 }, "refseq": { "ac": "XP_005672552", "name": "small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672552" }, "gene_names": [ { "name": "SGTB", "type": "recommended", "evidence": [ { "id": "A0A286ZNJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9" } ] }, { "name": "SGTB", "type": "synonym", "evidence": [ { "id": "XP_005672552", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672552" } ] } ], "protein_names": [ { "name": "Small glutamine-rich tetratricopeptide repeat-containing protein beta", "type": "recommended", "evidence": [ { "id": "A0A286ZNJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9/entry#names_and_taxonomy" } ] }, { "name": "Beta-SGT", "type": "synonym", "evidence": [ { "id": "A0A286ZNJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9/entry#names_and_taxonomy" } ] }, { "name": "small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005672552", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672552" } ] } ], "function": [ { "annotation": "Co-chaperone that binds directly to HSC70 and HSP70 and regulates their ATPase activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9#function" }, { "database": "UniProtKB", "id": "ARBA00058932", "url": "https://www.uniprot.org/uniprotkb/ARBA00058932#function" }, { "database": "UniProtKB", "id": "A0A8W4F6A5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6A5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SGTB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9", "locus": { "chromosome": "16", "start_pos": 44186562, "end_pos": 44225633, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000040603", "url": "https://www.ensembl.org/id/ENSSSCG00000040603" } ] } } ], "crossref": [ { "id": "A0A286ZNJ9", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZNJ9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000040603", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000040603", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513246", "url": "https://www.ncbi.nlm.nih.gov/gene/100513246", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032374", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032374", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047150", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047150", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZNJ9", "url": "https://www.orthodb.org/?gene=A0A286ZNJ9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45831", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45831", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45831:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45831:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00515", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00515", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13414", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13414", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16546", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16546", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005672552", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672552", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZNJ9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNJ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F6A5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6A5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F6A5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6A5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSIKHLVYAVIRFLREQSQMDAYTSDEQESLEVAIQCLETVFKVSPEDTHLAVSQPLTEMFTNSFCKNDILPLSNSVPEDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLRETGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSTDEHS", "length": 300, "header": "tr|A0A286ZNJ9-1|A0A286ZNJ9_PIG Isoform 1 of Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Sus scrofa OX=9823 GN=SGTB PE=1 SV=1 CANONICAL=A0A286ZNJ9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNJ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9/entry#A0A286ZNJ9-1", "sequence": { "sequence": "MSSIKHLVYAVIRFLREQSQMDAYTSDEQESLEVAIQCLETVFKVSPEDTHLAVSQPLTEMFTNSFCKNDILPLSNSVPEDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLRETGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSTDEHS", "length": 300, "header": "tr|A0A286ZNJ9-1|A0A286ZNJ9_PIG Isoform 1 of Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Sus scrofa OX=9823 GN=SGTB PE=1 SV=1 CANONICAL=A0A286ZNJ9-1" }, "locus": { "chromosome": "16", "start_pos": 44224238, "end_pos": 44188220, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051694.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051694.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033156.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033156.2" } ] } }, { "isoform_ac": "A0A8W4F6A5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9/entry#A0A8W4F6A5-1", "sequence": { "sequence": "MSSIKHLVYAVIRFLREQSQMDAYTSDEQESLEVAIQCLETVFKVSPEDTHLAVSQPLTEMFTNSFCKNDILPLSNSVPEDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLRETGTGLSFDMASLINNPAFISMVSIFPFLMSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSTDEHS", "length": 294, "header": "tr|A0A8W4F6A5-1|A0A286ZNJ9_PIG Computationally mapped isoform of Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Sus scrofa OX=9823 GN=SGTB PE=1 SV=1 CANONICAL=A0A286ZNJ9-1" }, "locus": { "chromosome": "16", "start_pos": 44224238, "end_pos": 44188220, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106551.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106551.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074696.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074696.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F6A5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6A5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "post-translational protein targeting to endoplasmic reticulum membrane", "id": "GO:0006620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006620", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNJ9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNJ9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": 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"database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03052", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03052", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd10302", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10302", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625236", "url": "https://www.ncbi.nlm.nih.gov/gene/100625236", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004045", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004045", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010987", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010987", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036282", "url": 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"categories": [ "Protein Classification", "Other" ] }, { "id": "PF13410", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13410", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003360051", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003360051", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZNL7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNL7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNL7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNL7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDS5", "url": "https://www.uniprot.org/uniprotkb/F1SDS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDS5-1", "url": "https://www.uniprot.org/uniprotkb/F1SDS5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATPNNLTPTNCSWWPISALESDAAKLVEAPDAPAAASHAHWPKESLVLYHWTQSFSSQKVRLVIAEKGLACEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYVERTFTGDHVVALMPEAGSPQHARVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQKRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASFLMGSLGGMGYFAYWYLKKKYI", "length": 367, "header": "tr|A0A286ZNL7-1|A0A286ZNL7_PIG Isoform 1 of Ganglioside induced differentiation associated protein 1 like 1 OS=Sus scrofa OX=9823 GN=GDAP1L1 PE=1 SV=1 CANONICAL=A0A286ZNL7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNL7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNL7/entry#A0A286ZNL7-1", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/A0A286ZNL7/entry#F1SDS5-1", "sequence": { "sequence": "MATPNNLTPTNCSWWPISALESDAAKLVEAPDAPAAASHAHWPKESLVLYHWTQSFSSQKVRLVIAEKGLACEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYVERTFTGDHVVALMPEAGSPQHARVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAEIRRQKCELWLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQKRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASFLMGSLGGMGYFAYWYLKKKYI", "length": 296, "header": "tr|F1SDS5-1|A0A286ZNL7_PIG Computationally mapped isoform of Ganglioside induced differentiation associated protein 1 like 1 OS=Sus scrofa OX=9823 GN=GDAP1L1 PE=1 SV=4 CANONICAL=A0A286ZNL7-1" }, "locus": { "chromosome": "17", "start_pos": 46733245, "end_pos": 46709470, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008071.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008071.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007856.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007856.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDS5", "url": "https://www.uniprot.org/uniprotkb/F1SDS5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625236", "name": "", "url": 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[9823]" } ], "gene": [ { "name": "ZNF462", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5", "locus": { "chromosome": "1", "start_pos": 248179784, "end_pos": 248031631, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000031592", "url": "https://www.ensembl.org/id/ENSSSCG00000031592" } ] } } ], "crossref": [ { "id": "ENSSSCG00000031592", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000031592", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100158126", "url": "https://www.ncbi.nlm.nih.gov/gene/100158126", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050688", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050688", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057830", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057830", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057831", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057831", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057832", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057832", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR059058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR059058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR059059", "url": "https://www.ebi.ac.uk/interpro/entry/IPR059059", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100158126", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158126", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CAFQSFS", "url": "https://omabrowser.org/oma/group/CAFQSFS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4F9A6", "url": "https://www.orthodb.org/?gene=A0A8W4F9A6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24403", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24403", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24403:SF58", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24403:SF58", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23075", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23075", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23077", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23077", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23223", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23223", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23224", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23224", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23225", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23225", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020922861", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922861", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNY5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHX1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHX1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BFI4", "url": "https://www.uniprot.org/uniprotkb/A0A287BFI4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BFI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BFI4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9A6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9A6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9A6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9A6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNVNEPRSGSMNASNQTEVEFSSIKDEFAIAEDLSGQNATALGTGSYYGHSPGYYGQHIAPNPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEGSSVGPPLPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNNLKETTAPPPAPSPMPDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSLRQQQEGTNLPDVQNKSAPSPTSNSTYLSMNVASREIPNTNVSNFRGSMGNSIMRPNSSSASKFSPMSYPQMKPKSPHNSGLVNLAERSRYGMADMTNSSADLETNSMLNDSSSDEELNEIDSENGLNAMDHQTAGMSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTTSDWDAVNSQSESISSSLNEGVVSYESSSINGRKSGVLLDPLQQQQPPPPPPPPPPPPPSQPQPPQLQPPHQVPPQPQPPPPPPPTQVPPLHPYKCTMCSYSTTTLKGLRVHQQHKHSFCDNLPKFEGQPASLPLESETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLTNDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDEEEEEDNEVEIEVELDREEEPTEPVLEVPTSFAAQQIWARDAPEPQKEPTFRTVTHDYNATNGAEIELTLSEDEEDYYGSSTNMKDHQVSNTALLNTQTPIYGTEHNNESTDFSDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLREILNSAPKNMATSTPVARGGGMPAPFAKNTPSKTFPPECENQKDPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALSQLSFEVGAPMSPKMSTMGSPPPPQPPPPDLSTELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGAEGPQGSPRPPAPMQQLNRSSAERDGLPVENEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKKPTSCMLVPSSSMERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHTEPSGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSPPSLTMPAEAKTYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDQSVLLDIIKEKDAVENPILPSEELVGPMNCENSMSAPLMEQEAECPEDARLSPEKSIQLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSIKVTAEDFVHDVEQSADMTQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSQSPPKLPVSLEPEITTEVSPSQVSVTEDEVGEEPVSTSHFATSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPVLMEEEERGGFEKAEVEGSEGQEIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGGGPRPQSSAYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEVPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHHSSQKATPSEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNNSRVSPVPLSGASGGAEQKTEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCYYETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMSSKADDRDLMRFSDRGAAINTEKRFPCEFCGRAFSQGSEWERHVLRHGMALNDTKQVSREEIHLKDSMEDSIKMPSIEEKEADEAIGIDFSLKNETVAICVVAADRSLLENAEAKKE", "length": 2498, "header": "tr|A0A286ZNY5-1|A0A286ZNY5_PIG Isoform 1 of Zinc finger protein 462 OS=Sus scrofa OX=9823 GN=ZNF462 PE=1 SV=1 CANONICAL=A0A286ZNY5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNY5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5/entry#A0A286ZNY5-1", "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNVNEPRSGSMNASNQTEVEFSSIKDEFAIAEDLSGQNATALGTGSYYGHSPGYYGQHIAPNPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEGSSVGPPLPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNNLKETTAPPPAPSPMPDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSLRQQQEGTNLPDVQNKSAPSPTSNSTYLSMNVASREIPNTNVSNFRGSMGNSIMRPNSSSASKFSPMSYPQMKPKSPHNSGLVNLAERSRYGMADMTNSSADLETNSMLNDSSSDEELNEIDSENGLNAMDHQTAGMSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTTSDWDAVNSQSESISSSLNEGVVSYESSSINGRKSGVLLDPLQQQQPPPPPPPPPPPPPSQPQPPQLQPPHQVPPQPQPPPPPPPTQVPPLHPYKCTMCSYSTTTLKGLRVHQQHKHSFCDNLPKFEGQPASLPLESETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLTNDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDEEEEEDNEVEIEVELDREEEPTEPVLEVPTSFAAQQIWARDAPEPQKEPTFRTVTHDYNATNGAEIELTLSEDEEDYYGSSTNMKDHQVSNTALLNTQTPIYGTEHNNESTDFSDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLREILNSAPKNMATSTPVARGGGMPAPFAKNTPSKTFPPECENQKDPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALSQLSFEVGAPMSPKMSTMGSPPPPQPPPPDLSTELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGAEGPQGSPRPPAPMQQLNRSSAERDGLPVENEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKKPTSCMLVPSSSMERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHTEPSGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSPPSLTMPAEAKTYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDQSVLLDIIKEKDAVENPILPSEELVGPMNCENSMSAPLMEQEAECPEDARLSPEKSIQLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSIKVTAEDFVHDVEQSADMTQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSQSPPKLPVSLEPEITTEVSPSQVSVTEDEVGEEPVSTSHFATSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPVLMEEEERGGFEKAEVEGSEGQEIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGGGPRPQSSAYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEVPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHHSSQKATPSEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNNSRVSPVPLSGASGGAEQKTEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCYYETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMSSKADDRDLMRFSDRGAAINTEKRFPCEFCGRAFSQGSEWERHVLRHGMALNDTKQVSREEIHLKDSMEDSIKMPSIEEKEADEAIGIDFSLKNETVAICVVAADRSLLENAEAKKE", "length": 2498, "header": "tr|A0A286ZNY5-1|A0A286ZNY5_PIG Isoform 1 of Zinc finger protein 462 OS=Sus scrofa OX=9823 GN=ZNF462 PE=1 SV=1 CANONICAL=A0A286ZNY5-1" }, "locus": { "chromosome": "1", "start_pos": 248179134, "end_pos": 248092426, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062986.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062986.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033331.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033331.1" } ] } }, { "isoform_ac": "A0A287AHX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5/entry#A0A287AHX1-1", "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNVNEPRSGSMNASNQTEVEFSSIKDEFAIAEDLSGQNATALGTGSYYGHSPGYYGQHIAPNPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEGSSVGPPLPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNNLKETTAPPPAPSPMPDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSLRQQQEGTNLPDVQNKSAPSPTSNSTYLSMNVASREIPNTNVSNFRGSMGNSIMRPNSSSASKFSPMSYPQMKPKSPHNSGLVNLAERSRYGMADMTNSSADLETNSMLNDSSSDEELNEIDSENGLNAMDHQTAGMSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTTSDWDAVNSQSESISSSLNEGVVSYESSSINGRKSGVLLDPLQQQQPPPPPPPPPPPPPSQPQPPQLQPPHQVPPQPQPPPPPPPTQVPPLHPYKCTMCSYSTTTLKGLRVHQQHKHSFCDNLPKFEGQPASLPLESETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLTNDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDEEEEEDNEVEIEVELDREEEPTEPVLEVPTSFAAQQIWARDAPEPQKEPTFRTVTHDYNATNGAEIELTLSEDEEDYYGSSTNMKDHQVSNTALLNTQTPIYGTEHNNESTDFSDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLREILNSAPKNMATSTPVARGGGMPAPFAKNTPSKTFPPECENQKDPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALSQLSFEVGAPMSPKMSTMGSPPPPQPPPPDLSTELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGAEGPQGSPRPPAPMQQLNRSSAERDGLPVENEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKKPTSCMLVPSSSMERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHTEPSGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSPPSLTMPAEAKTYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDQSVLLDIIKEKDAVENPILPSEELVGPMNCENSMSAPLMEQEAECPEDARLSPEKSIQLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSIKVTAEDFVHDVEQSADMTQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSQSPPKLPVSLEPEITTEVSPSQVSVTEDEVGEEPVSTSHFATSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPVLMEEEERGGFEKAEVEGSEGQEIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGGGPRPQSSAYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEVPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHHSSQKATPSEEVEDSNEERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCYYETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMSSKADDRDLMRFSDRGAAINTEKRFPCEFCGRAFSQGSEWERHVLRHGMALNDTKQVSREEIHLKDSMEDSIKMPSIEEKEADEAIGIDFSLKNETVAICVVAADRSLLENAEAKKE", "length": 2363, "header": "tr|A0A287AHX1-1|A0A287AHX1_PIG Computationally mapped isoform of Zinc finger protein 462 OS=Sus scrofa OX=9823 GN=ZNF462 PE=1 SV=1 CANONICAL=A0A286ZNY5-1" }, "locus": { "chromosome": "1", "start_pos": 248179134, "end_pos": 248092426, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053639.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053639.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043637.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043637.1" } ] } }, { "isoform_ac": "A0A287BFI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5/entry#A0A287BFI4-1", "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNVNEPRSGSMNASNQTEVEFSSIKDEFAIAEDLSGQNATALGTGSYYGHSPGYYGQHIAPNPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEGSSVGPPLPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNNLKETTAPPPAPSPMPDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSLRQQQEGTNLPDVQNKSAPSPTSNSTYLSMNVASREIPNTNVSNFRGSMGNSIMRPNSSSASKFSPMSYPQMKPKSPHNSGLVNLAERSRYGMADMTNSSADLETNSMLNDSSSDEELNEIDSENGLNAMDHQTAGMSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTTSDWDAVNSQSESISSSLNEGVVSYESSSINGRKSGVLLDPLQQQQPPPPPPPPPPPPPSQPQPPQLQPPHQVPPQPQPPPPPPPTQVPPLHPYKCTMCSYSTTTLKGLRVHQQHKHSFCDNLPKFEGQPASLPLESETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLTNDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDEEEEEDNEVEIEVELDREEEPTEPVLEVPTSFAAQQIWARDAPEPQKEPTFRTVTHDYNATNGAEIELTLSEDEEDYYGSSTNMKDHQVSNTALLNTQTPIYGTEHNNESTDFSDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLREILNSAPKNMATSTPVARGGGMPAPFAKNTPSKTFPPECENQKDPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALSQLSFEVGAPMSPKMSTMGSPPPPQPPPPDLSTELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGAEGPQGSPRPPAPMQQLNRSSAERDGLPVENEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKKPTSCMLVPSSSMERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHTEPSGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSPPSLTMPAEAKTYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDQSVLLDIIKEKDAVENPILPSEELVGPMNCENSMSAPLMEQEAECPEDARLSPEKSIQLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSIKVTAEDFVHDVEQSADMTQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSQSPPKLPVSLEPEITTEVSPSQVSVTEDEVGEEPVSTSHFATSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPVLMEEEERGGFEKAEVEGSEGQEIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGGGPRPQSSAYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEVPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHHSSQKATPSEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNNSRVSPVPLSGASGGAEQKTEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCYYETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMSSKADDRDLMRFSDRGAAINTEKRFPCEFCGRAFSQGSEWERHVLRHGM", "length": 2430, "header": "tr|A0A287BFI4-1|A0A287BFI4_PIG Computationally mapped isoform of Zinc finger protein 462 OS=Sus scrofa OX=9823 GN=ZNF462 PE=1 SV=2 CANONICAL=A0A286ZNY5-1" }, "locus": { "chromosome": "1", "start_pos": 248177818, "end_pos": 248092426, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051400.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051400.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054830.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054830.2" } ] } }, { "isoform_ac": "A0A8W4F9A6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5/entry#A0A8W4F9A6-1", "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNVNEPRSGSMNASNQTEVEFSSIKDEFAIAEDLSGQNATALGTGSYYGHSPGYYGQHIAPNPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEGSSVGPPLPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNNLKETTAPPPAPSPMPDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSLRQQQEGTNLPDVQNKSAPSPTSNSTYLSMNVASREIPNTNVSNFRGSMGNSIMRPNSSSASKFSPMSYPQMKPKSPHNSGLVNLAERSRYGMADMTNSSADLETNSMLNDSSSDEELNEIDSENGLNAMDHQTAGMSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTTSDWDAVNSQSESISSSLNEGVVSYESSSINGRKSGVLLDPLQQQQPPPPPPPPPPPPPSQPQPPQLQPPHQVPPQPQPPPPPPPTQVPPLHPYKCTMCSYSTTTLKGLRVHQQHKHSFCDNLPKFEGQPASLPLESETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLTNDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDEEEEEDNEVEIEVELDREEEPTEPVLEVPTSFAAQQIWARDAPEPQKEPTFRTVTHDYNATNGAEIELTLSEDEEDYYGSSTNMKDHQVSNTALLNTQTPIYGTEHNNESTDFSDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLREILNSAPKNMATSTPVARGGGMPAPFAKNTPSKTFPPECENQKDPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALSQLSFEVGAPMSPKMSTMGSPPPPQPPPPDLSTELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGAEGPQGSPRPPAPMQQLNRSSAERDGLPVENEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKKPTSCMLVPSSSMERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHTEPSGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSPPSLTMPAEAKTYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDQSVLLDIIKEKDAVENPILPSEELVGPMNCENSMSAPLMEQEAECPEDARLSPEKSIQLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSIKVTAEDFVHDVEQSADMTQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSQSPPKLPVSLEPEITTEVSPSQVSVTEDEVGEEPVSTSHFATSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPVLMEEEERGGFEKAEVEGSEGQEIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGGGPRPQSSAYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEVPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKQEAEDPSHLFLDGLEAAKDASGALVDRVDGEHCLLDGMLEDETRPGGYHCSQCDRVLMSMQGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHHSSQKATPSEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNNSRVSPVPLSGASGGAEQKTEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCYYETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMSSKADDRDLMRFSDRGAAINTEKRFPCEFCGRAFSQGSEWERHVLRHGMALNDTKQVSREEIHLKDSMEDSIKMPSIEEKEADEAIGIDFSLKNETVAICVVAADRSLLENAEAKKE", "length": 2559, "header": "tr|A0A8W4F9A6-1|A0A286ZNY5_PIG Computationally mapped isoform of Zinc finger protein 462 OS=Sus scrofa OX=9823 GN=ZNF462 PE=1 SV=1 CANONICAL=A0A286ZNY5-1" }, "locus": { "chromosome": "1", "start_pos": 248179134, "end_pos": 248092426, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102552.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102552.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075410.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075410.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 582, "start_aa": "Thr", "end_pos": 582, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr582", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F9A6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9A6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100158126", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158126", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LIX2-1", "protein_name": "Zinc finger protein 462", "gene_name": "Zfp462", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNDDEPLSGSVNAGNQTEVEFSSIKDEFVIAEDLSGQSATALGSGSYYGHSPGYYGQHITPNPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEESPTGPPVPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNSLKESAAPPPAPAPLSDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSNIRQQQEGTNVSEVQNNNEPSPTSNSTYLSMNAASREMPNTNVSNFRGSVGNSIMRPNSSSTSKFSPMSYPQMKPKSPHNSGLVNLTERSRYGMSDMTNSSADLDTNSMLNDSSSDEDLNEVDSENGLSVMDHQASGLSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTSDWDTVNSQSESLSSSLNEGMLSYESPSINGRKSGVMLDPLQQQQPPQPPPPLPPPPPPPSQPVQQPPPPQLQSPHQVPPQPQPPPPTQQPQPPTQVPPLHPYKCTMCSYSTMTLKGLRVHQQHKHSFCDNLPKFEGQPSSLPLENETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLANDFPLDLSPVKKRTRIDEIASNLQSKINQTKLQEDAIINVEDDEEEEDDNEVEIEVELDREEEPTEPIMDVPTAFSAQQIWARDTSESQKEANYRSITHDYTATNGAEIELTLSEDEEDYYGSSTSIKDHQVSNAALLNTQPPIYGTEHSNENTDFGDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNAESQTLREILNSAPKSMATSTPVARGGGMPATFNKNTSPKTFTPECENQKDPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALAQLSFEVGAPMSPKMSNMGSPPPPQPPPPDLSIELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGAEGLQDSPRPPAPMQLNRSSSERDCPPVETEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKPASCVLLPASGMERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHMEPSGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSSPTLTMSAEAKTYRCRDCAFEAVSIWDITNHYQAFHPWAMNGDESVLLDIIKEKDGVDKALLAPEELIGAVNCENSLPNPLPEQEAECPEDARLSPEKSIHLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDVDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPAIKVTAEDFVHDVEQSADITQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSPSPPKLPVSLEPEITTEVSPSQVSMTEEEVGEDPMSTAHFSTSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPPLMEEEGRSGFERPEVEGEAQDIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGSGPRFQNSTFQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEAPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKQEAEDPSHLFLDGFEAARDASGTLVGRVDGGHCLLDGMLEDETRPGGYHCSQCDRVLMSMQGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHHSSQKATPAEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNNSRVSPVPPSGTAAGTEQKAEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELRPYKCQLCYYETKHTEELDTHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKDDEMSSKTEDRELMRFSDRGAGVNTEKRFPCEFCGRAFSQGSEWERHVLRHGMALHDTDQVSRDEIHTKEMVEDSMQLPSIEAKEDDEPIGIDFPLKSETVTICVVAADKSLLENAEAKTE", "length": 2565 }, "evidence": [ { "id": "A0A286ZNY5", "url": "https://omabrowser.org/oma/group/A0A286ZNY5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B1AWL2-1", "protein_name": "Zinc finger protein 462", "gene_name": "Znf462", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNDDEPLSGSMNASNQTEVEFSSIKDEFVIAEDLPGQSATALGSGGYYGHSPGYYGQHITPNPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEESPTGPPVPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNSLKESTAPPPAPAPLPDPLVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSIRQQEGPNVSEAQNDNEPSPTSNSTYLSMNAASREMPNANVSNFRGSMGNSIMRPNSSSTSKFSSSMSYPQMKPKSPHNSGLVNLTERSRYGMSDMTNSSADLDTNSMLNDSSSDEDLNEVDSENGLSVLDHQASGLSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTSDWDTVNSQSESLSSSLNEGMVSYESSSINGRKSGVMLDPLQQQQPPQPPPPLPPPPPPPSQPLPQPPPPPLQSPHQVPPPTQQPQPPTQAPPLHPYKCTMCSYSTMTLKGLRVHQQHKHSFCDNLPKFEGQPSSLPLENETDSHPSSSNTVKKSQTSILGLSSKNNFVAKANRKLASDFPLDLSPVKKRTRIDEIASNLQSKINQTKLQEDAIINVEDDEEEEDDNEVEIEVELDREEEATDPIMEVPTAFSAQQIWARDASEAQKEPNYRSITHDYTATNGAEIELTLSEDEEDYYGSSASMKDQVSNAALLNTQPAIYGTEPSNENTDFGDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNAESQTLREILNSAPKSMATSTPVARGGGLPATFNKNTPPKTFTPECESQKDPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALSQLSFEVGAPMSPKMSNMGSPPPPQPPPPDLSIELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGAEGLQDSPRPPAPLQLNSSERDCPPVETEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKPASCVLLPASGMERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHMEPSGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSSPTLTMSAEAKTYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDESVLLDIIKEKDGVDKALLAPEELIGPVNCENSIPNPLPEQEAECPEDARLSPEKSIHLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPAIKVTAEDFVHDVEQSADISQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSPPPPKLPVSLEPEITTEVSPSQVSVTEEEVGEDPMSTAHFSTSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPPLMEEEERSSFERAEVEGEAQDIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGSGPRFQNSTFQCKHCDSKLQSIAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEVPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPAVSAAVKGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHAHPSSQKATPAEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNKSRVSPVPPSGTAAGTEQKAEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCYYETKHTEELDTHLRDEHKVSRNFELVGRVNLDQLEQMKEKIESSSSEDEDKDDEMSSKAEDRELMRFADRGPGVNTEKRFPCEFCGRAFSQGSEWERHVLRHGMSLHDTNQVSRNEIHTKEMVEESMQLPSIEAKEDDEPIGIDFPLKSETVTICVVAADKSLLEDAEAKNE", "length": 2495 }, "evidence": [ { "id": "A0A286ZNY5", "url": "https://omabrowser.org/oma/group/A0A286ZNY5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96JM2-1", "protein_name": "Zinc finger protein 462", "gene_name": "ZNF462", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVAEDNVNELRCGSVNASNQTEVEFSSIKDEFAIAEDLSGQNATSLGTGGYYGHSPGYYGQHIAANPKPTNKFFQCKFCVRYFRSKNLLIEHTRKVHGAQAEGSSSGPPVPGSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKHQKMYHKNNLKETTAPPPAPAPMPDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSLRQQQEGTNLPDVPNKSAPSPTSNSTYLTMNAASREIPNTTVSNFRGSMGNSIMRPNSSASKFSPMSYPQMKPKSPHNSGLVNLTERSRYGMTDMTNSSADLETNSMLNDSSSDEELNEIDSENGLSAMDHQTSGLSAEQLMGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECPFTCKSSLKLGAHKQCHTGTTSDWDAVNSQSESISSSLNEGVVSYESSSINGRKSGVMLDPLQQQQPPQPPPPPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPPTQQPQPPTQAAPLHPYKCTMCNYSTTTLKGLRVHQQHKHSFCDNLPKFEGQPSSLPLENETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLANDFPLDLSPVKKRTRIDEIASNLQSKINQTKQQEDAVINVEDDEEEEEDNEVEIEVELDREEEPTEPIIEVPTSFSAQQIWVRDTSEPQKEPNFRNITHDYNATNGAEIELTLSEDEEDYYGSSTNLKDHQVSNTALLNTQTPIYGTEHNSENTDFGDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLREILNSAPKNMATSTPVARGGGLPATFNKNTPKTFTPECENQKDPLVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRMVSVDRGSALSQLSFEVGAPMSPKMSNMGSPPPPQPPPPDLSTELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAMMRGVEGPQGSPRPPAPIQQLNRSSSERDGPPVENEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRNQKKPASCVLVSPSNLERDKTKLRALKCRQCSYTSPYFYALRKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHTEPNGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSPPSLTMPAEAKTYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDESVLLDIIKEKDAVEKPILSSEELAGPVNCENSIPTPFPEQEAECPEDARLSPEKSLQLASANPAISSTPYQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSIKVTAEDFVHDVEQSADISQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFSQSPPKLPVPLEPEMTTEVSPSQVSITEEEVGEEPVSTSHFSTSHLVSHTVFRCQLCKYFCSTRKGIARHYRIKHNNVRAQPEGKNNLFKCALCAYTNPIRKGLAAHYQKRHDIDAYYTHCLAASRTISDKPNKVIIPSPPKDDSPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHPGVFPKKQHASKLGGYFTAVYADEHEKPTLMEEEERGNFEKAEVEGEAQEIEWLPFRCIKCFKLSFSTAELLCMHYTDHHSRDLKRDFIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERPFGHLEEVPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGNVPAVSAAVKGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTLPRPRIVSLLSSHSHHSSQKATPAEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNNSRVSPVPLSGAAAGTEQKTEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCYYETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMNSKAEDRELMRFSDHGAALNTEKRFPCEFCGRAFSQGSEWERHVLRHGMALNDTKQVSREEIHPKEIMENSVKMPSIEEKEDDEAIGIDFSLKNETVAICVVTADKSLLENAEAKKE", "length": 2506 }, "evidence": [ { "id": "A0A286ZNY5", "url": "https://omabrowser.org/oma/group/A0A286ZNY5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZNY5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1114, "end_pos": 1116, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1168, "end_pos": 1170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1193, "end_pos": 1195, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2134, "end_pos": 2136, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2159, "end_pos": 2161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2433, "end_pos": 2435, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2475, "end_pos": 2477, "annotation": 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"annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZNY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY5" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 108, "end_pos": 136, "start_aa": "Phe", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 582 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], 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}, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZNZ5-1", "uniprot_ac": "A0A286ZNZ5", "uniprot_id": "A0A286ZNZ5_PIG", "mass": { "chemical_mass": 36828.0, "monoisotopic_mass": 36828.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A286ZNZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNZ5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF27241", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZNZ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNZ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNZ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNZ5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSHICKVEKEIALLKAQHEQYVAEAEEKLQRARLLVESVQKERVDLSNQLEEGRRRGGRWRTCSSELQAIESLCLSQHTNMIESNNISGEKIRMKEAVEGLQDKLNKRDKEVTALTSQTEMLRAQVSALEGKCRSGEKKVDAFQKEKRRLEAKLEAVSLKTHDASGQLVLISQKLLRKERSLNELWVLLLEANRHSLGPERDLSHVVHKAEWRIKEQKLKDDIRGLQEKLTRLDKEKSLSDQRRYSLIDQSSSSAAEVLRLQHQLMNTEDVLRNTLDQAQQVERLVEAMRSCPDKPQAIGNSGSANSIHQQDKAHKQEDKH", "length": 321, "header": "tr|A0A286ZNZ5-1|A0A286ZNZ5_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A286ZNZ5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNZ5-1", "url": 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] }, { "uniprot_canonical_ac": "A0A286ZP08-1", "uniprot_ac": "A0A286ZP08", "uniprot_id": "A0A286ZP08_PIG", "mass": { "chemical_mass": 37294.0, "monoisotopic_mass": 37294.0 }, "refseq": { "ac": "XP_020922066", "name": "myeloid-associated differentiation marker-like protein 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922066" }, "gene_names": [ { "name": "MYADML2", "type": "recommended", "evidence": [ { "id": "A0A286ZP08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP08" } ] }, { "name": "MYADML2", "type": "synonym", "evidence": [ { "id": "XP_020922066", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922066" } ] } ], "protein_names": [ { "name": "Myeloid-associated differentiation marker-like protein 2", "type": "recommended", "evidence": [ { "id": "A0A286ZP08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP08/entry#names_and_taxonomy" } ] }, { "name": "myeloid-associated 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{ "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP08", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP08" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623121", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623121", 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], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DNAJB2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17", "locus": { "chromosome": "15", "start_pos": 121335991, "end_pos": 121319982, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016217", "url": "https://www.ensembl.org/id/ENSSSCG00000016217" } ] } } ], "crossref": [ { "id": "A0A286ZP17", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZP17", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016217", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016217", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100522168", "url": "https://www.ncbi.nlm.nih.gov/gene/100522168", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDD5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDD5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDD5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SR79", "url": "https://www.uniprot.org/uniprotkb/F1SR79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SR79-1", "url": "https://www.uniprot.org/uniprotkb/F1SR79-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASYYEILDVPRSATADDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGTGPSRAEAGGGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDLGPFSELQNRGPRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSITINGIPDDLALGLELSRREQQQSVTSRSGATQVGQTPASHSPDGDLSEDDEDLQLAMAYSLSEMEAAGKKPAGGRGAPRRRQGQPKAQNQDPGTGETCEGARGDTAKPSPSPEEKASRCLIL", "length": 325, "header": "tr|A0A286ZP17-1|A0A286ZP17_PIG Isoform 1 of DnaJ heat shock protein family (Hsp40) member B2 OS=Sus scrofa OX=9823 GN=DNAJB2 PE=1 SV=1 CANONICAL=A0A286ZP17-1" }, "isoforms": [ { "isoform_ac": "A0A286ZP17-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17/entry#A0A286ZP17-1", "sequence": { "sequence": "MASYYEILDVPRSATADDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGTGPSRAEAGGGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDLGPFSELQNRGPRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSITINGIPDDLALGLELSRREQQQSVTSRSGATQVGQTPASHSPDGDLSEDDEDLQLAMAYSLSEMEAAGKKPAGGRGAPRRRQGQPKAQNQDPGTGETCEGARGDTAKPSPSPEEKASRCLIL", "length": 325, "header": "tr|A0A286ZP17-1|A0A286ZP17_PIG Isoform 1 of DnaJ heat shock protein family (Hsp40) member B2 OS=Sus scrofa OX=9823 GN=DNAJB2 PE=1 SV=1 CANONICAL=A0A286ZP17-1" }, "locus": { "chromosome": "15", "start_pos": 121325523, "end_pos": 121320411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048652.2", "url": "https://www.ensembl.org/id/ENSSSCT00000048652.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033208.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033208.1" } ] } }, { "isoform_ac": "A0A286ZVQ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17/entry#A0A286ZVQ8-1", "sequence": { "sequence": "MGHFVPWWQVLAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGTGPSRAEAGGGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDLGPFSELQNRGPRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSITINGIPDDLALGLELSRREQQQSVTSRSGATQVGQTPASHSPDGDLSEDDEDLQLAMAYSLSEMEAAGKKPAGGRGAPRRRQGQPKAQNQDPGTGETCEGARGDTAKPSPSPEEKASRCLIL", "length": 315, "header": "tr|A0A286ZVQ8-1|A0A286ZVQ8_PIG Computationally mapped isoform of DnaJ heat shock protein family (Hsp40) member B2 OS=Sus scrofa OX=9823 GN=DNAJB2 PE=1 SV=1 CANONICAL=A0A286ZP17-1" }, "locus": { "chromosome": "15", "start_pos": 121325523, "end_pos": 121321097, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047045.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047045.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035753.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035753.2" } ] } }, { "isoform_ac": "A0A287A532-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17/entry#A0A287A532-1", "sequence": { "sequence": "MASYYEILDVPRSATADDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGTGPSRAEAGGGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDLGPFSELQNRGPRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSITINGIPDDLALGLELSRREQQQSVTSRSGATQVGQTPASHSPDGDLSEDDEDLQLAMAYSLSEMEAAGKKPADVF", "length": 278, "header": "tr|A0A287A532-1|A0A287A532_PIG Computationally mapped isoform of DnaJ heat shock protein family (Hsp40) member B2 OS=Sus scrofa OX=9823 GN=DNAJB2 PE=1 SV=1 CANONICAL=A0A286ZP17-1" }, "locus": { "chromosome": "15", "start_pos": 121326482, "end_pos": 121320411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041853.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041853.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039043.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039043.2" } ] } }, { "isoform_ac": "A0A5G2R3C4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17/entry#A0A5G2R3C4-1", "sequence": { "sequence": "MASYYEILDVPRSATADDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGTGPSRAEAGGGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDLGPFSELQNRGPRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSITINGIPDDLALGLELSRREQQQSVTSRSGATQVGQTPASHSPDGDLSEDDEDLQLAMAYSLSEMEAAGKKPAGSHIWLPPGSCCFLCKAICHPVLHSAARTRLRPAASSPMGHPGSGRGKSLHLASSGRTA", "length": 334, "header": "tr|A0A5G2R3C4-1|A0A5G2R3C4_PIG Computationally mapped isoform of DnaJ heat shock protein family (Hsp40) member B2 OS=Sus scrofa OX=9823 GN=DNAJB2 PE=1 SV=1 CANONICAL=A0A286ZP17-1" }, "locus": { "chromosome": "15", "start_pos": 121335909, "end_pos": 121320411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103279.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103279.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077443.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077443.1" } ] } }, { "isoform_ac": "A0A8W4FDD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17/entry#A0A8W4FDD5-1", "sequence": { "sequence": "MASYYEILDVPRSATADDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGTGPSRAEAGGGGPGFTFTFRSPEEVFREFFGSGDPFAELFDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSITINGIPDDLALGLELSRREQQQSVTSRSGATQVGQTPASHSPDGDLSEDDEDLQLAMAYSLSEMEAAGKKPAGSHIWLPPGSCCFLCKAICHPVLHSAARTRLRYDLTENMRTAESWKCIKR", "length": 294, "header": "tr|A0A8W4FDD5-1|A0A286ZP17_PIG Computationally mapped isoform of DnaJ heat shock protein family (Hsp40) member B2 OS=Sus scrofa OX=9823 GN=DNAJB2 PE=1 SV=1 CANONICAL=A0A286ZP17-1" }, "locus": { "chromosome": "15", "start_pos": 121327758, "end_pos": 121320411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104692.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104692.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077420.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077420.1" } ] } }, { "isoform_ac": "F1SR79-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17/entry#F1SR79-1", "sequence": { "sequence": "MASYYEILDVPRSATADDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGTGPSRAEAGGGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDLGPFSELQNRGPRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSITINGIPDDLALGLELSRREQQQSVTSRSGATQVGQTPASHSPDGDLSEDDEDLQLAMAYSLSEMEAAGKKPAACPGPRD", "length": 282, "header": "tr|F1SR79-1|A0A286ZP17_PIG Computationally mapped isoform of DnaJ heat shock protein family (Hsp40) member B2 OS=Sus scrofa OX=9823 GN=DNAJB2 PE=1 SV=2 CANONICAL=A0A286ZP17-1" }, "locus": { "chromosome": "15", "start_pos": 121326256, "end_pos": 121320411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017658.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017658.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017180.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017180.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SR79", "url": "https://www.uniprot.org/uniprotkb/F1SR79" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522168", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522168", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P25686-3", "protein_name": "DnaJ homolog subfamily B member 2", "gene_name": "DNAJB2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPFAELFDDLGPFSELQNRGSRHSGPFFTFSSSFPGHSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVTINGVPDDLALGLELSRREQQPSVTSRSGGTQVQQTPASCPLDSDLSEDEDLQLAMAYSLSEMEAAGKKPAGGREAQHRRQGRPKAQHQDPGLGGTQEGARGEATKRSPSPEEKASRCLIL", "length": 324 }, "evidence": [ { "id": "A0A286ZP17", "url": "https://omabrowser.org/oma/group/A0A286ZP17/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QYI5-3", "protein_name": "DnaJ homolog subfamily B member 2", "gene_name": "Dnajb2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSRSETGGAGPGFTFTFRSPEEVFREFFGSGDPFSELFDDLGVFSELQNQGPRLTGPFFTFSSSFPANSDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQERVEVEEDGQLKSVSINGVPDDLALGLELSRREQQPSVAPGLGVMQVRPTSLSRPPDHDLSEDEDLQLAMAYSLSEMEAAGQKPAGGRGAQQRQHGQPKAQHRDLDVGGTHKSVRGEAAKLSPSSEEKASRCHIL", "length": 324 }, "evidence": [ { "id": "A0A286ZP17", "url": "https://omabrowser.org/oma/group/A0A286ZP17/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP17", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP17", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP17", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "unfolded protein binding", "id": "GO:0051082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051082", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP17", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP17" } ], "pmid": "" }, { "name": "Hsp70 protein binding", "id": "GO:0030544", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030544", "evidence": [ { 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The C-degron recognized by the DesCEND pathway is usually a motif of less than ten residues and can be present in full-length proteins, truncated proteins or proteolytically cleaved forms. The CRL5(KLHDC1) complex mediates ubiquitination and degradation of truncated SELENOS selenoprotein produced by failed UGA/Sec decoding, which ends with a glycine.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZYK3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYK3#function" }, { "database": "UniProtKB", "id": "ARBA00056997", "url": "https://www.uniprot.org/uniprotkb/ARBA00056997#function" }, { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLHDC1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18", "locus": { "chromosome": 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"Protein" ] }, { "id": "A0A286ZP18-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYK3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYK3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPJ6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPJ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPJ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPJ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADSQLFCVAEERSGHCAVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWTMHLMEGELPTSMSGSCGACINGKLYVFGGYDDKGYSNRLYFVNLRTRDGTYIWEKITNFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHNELQDCFDVHDASWEEQIFWGWHNDVHIFDTKTQSWLQPEIKGGVPPQPRAAHTCAVLGNKGYIFGGRVLQTRMNDLHYLNLDTWTWSGRIPVNGENPKHRSWHTLTPIADDTLFLFGGLSADNVPLSDGWIHNVITNCWKQLTHLPKTKPRLWHTACLGKENEIMVFGGSKDDLLSLDTGHCNDLLIFQTQPYSLLRLCLDCIGKNAIILESQISLLPPKLLQQVLKKITFWTAANHREEQRAQKEETENKYQWISGN", "length": 406, "header": "tr|A0A286ZP18-1|A0A286ZP18_PIG Isoform 1 of Kelch domain-containing protein 1 OS=Sus scrofa OX=9823 GN=KLHDC1 PE=4 SV=1 CANONICAL=A0A286ZP18-1" }, "isoforms": [ { "isoform_ac": "A0A286ZP18-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18/entry#A0A286ZP18-1", "sequence": { "sequence": "MADSQLFCVAEERSGHCAVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWTMHLMEGELPTSMSGSCGACINGKLYVFGGYDDKGYSNRLYFVNLRTRDGTYIWEKITNFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHNELQDCFDVHDASWEEQIFWGWHNDVHIFDTKTQSWLQPEIKGGVPPQPRAAHTCAVLGNKGYIFGGRVLQTRMNDLHYLNLDTWTWSGRIPVNGENPKHRSWHTLTPIADDTLFLFGGLSADNVPLSDGWIHNVITNCWKQLTHLPKTKPRLWHTACLGKENEIMVFGGSKDDLLSLDTGHCNDLLIFQTQPYSLLRLCLDCIGKNAIILESQISLLPPKLLQQVLKKITFWTAANHREEQRAQKEETENKYQWISGN", "length": 406, "header": "tr|A0A286ZP18-1|A0A286ZP18_PIG Isoform 1 of Kelch domain-containing protein 1 OS=Sus scrofa OX=9823 GN=KLHDC1 PE=4 SV=1 CANONICAL=A0A286ZP18-1" }, "locus": { "chromosome": "1", "start_pos": 179604213, "end_pos": 179540635, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061246.1", "url": "https://www.ensembl.org/id/ENSSSCT00000061246.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033327.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033327.1" } ] } }, { "isoform_ac": "A0A286ZYK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18/entry#A0A286ZYK3-1", "sequence": { "sequence": "MADSQLFCVAEERSGHCAVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWTMHLMEGELPTSMSGSCGACINGKLYVFGGYDDKGYSNRLYFVNLRTRDGTYIWEKITNFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHNELQDCFDVHDASWVRLPELFIAQTGFCMREEQIFWGWHNDVHIFDTKTQSWLQPEIKGGVPPQPRAAHTCAVLGNKGYIFGGRVLQTRMNDLHYLNLDTWTWSGRIPVNGENPKHRSWHTLTPIADDTLFLFGGLSADNVPLSDGWIHNVITNCWKQLTHLPKTKPRLWHTACLGKENEIMVFGGSKDDLLSLDTGHCNDLLIFQTQPYSLLRLCLDCIGKNAIILESQISLLPPKLLQQVLKKITFWTAANHREEQRAQKEETENKYQWISGN", "length": 422, "header": "tr|A0A286ZYK3-1|A0A286ZYK3_PIG Computationally mapped isoform of Kelch domain-containing protein 1 OS=Sus scrofa OX=9823 GN=KLHDC1 PE=4 SV=2 CANONICAL=A0A286ZP18-1" }, "locus": { "chromosome": "1", "start_pos": 179604213, "end_pos": 179540635, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051347.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051347.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036720.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036720.2" } ] } }, { "isoform_ac": "A0A8W4FPJ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18/entry#A0A8W4FPJ6-1", "sequence": { "sequence": "MADSQLFCVAEERSGHCAVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWTMHLMEGELPTSMSGSCGACINGKLYVFGGYDDKGYSNRLYFVNLRTRDGTYIWEKITNFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHNELQDCFDVHDASWGGVPPQPRAAHTCAVLGNKGYIFGGRVLQTRMNDLHYLNLDTWTWSGRIPVNGENPKHRSWHTLTPIADDTLFLFGGLSADNVPLSDGWIHNVITNCWKQLTHLPKTKPRLWHTACLGKENEIMVFGGSKDDLLSLDTGHCNDLLIFQTQPYSLLRLCLDCIGKNAIILESQISLLPPKLLQQVLKKITFWTAANHREEQRAQKEETENKYQWISGN", "length": 378, "header": "tr|A0A8W4FPJ6-1|A0A8W4FPJ6_PIG Computationally mapped isoform of Kelch domain containing 1 OS=Sus scrofa OX=9823 GN=KLHDC1 PE=4 SV=1 CANONICAL=A0A286ZP18-1" }, "locus": { "chromosome": "1", "start_pos": 179604213, "end_pos": 179540635, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104441.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104441.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081123.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081123.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110262107", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110262107", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2KAE3-1", "protein_name": "Kelch domain-containing protein 1", "gene_name": "Klhdc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSQAFCVAEERSGHCAVVDGHFLYVWGGYVSIEDNEVYLPNDEIWTYDVDSGLWKMHLMEGELPPSMSGSCGACINGRLYVFGGYDDKGYSNRLYFVDLRTRDGTYIWEKITKFEGQPPTPRDKLSCWVYKDRLIYFGGYGYRRHSELQECFDVHDASWEEQIFWGWHNDVHVFDTKTRTWSQPEIKGGVPPQPRAAHSCAVLGNKGYVFGGRVLQTRMNDLHYLNLDTWVWSGRISVNGESPKHRSWHTLTAIADDKLFLFGGLSADNIPLSDGWIHNIITNCWKQLRHLPYTRPRLWHTACLGKENEIMVFGGSKDNLLFLDTGHCNDLLIFQTQPYSLLRSCLDCIGKNAIILKSQISLLPPKLLQQVFQKITFWTAANYRKEQRIQKGETENKQPRVSSC", "length": 406 }, "evidence": [ { "id": "A0A286ZP18", "url": "https://omabrowser.org/oma/group/A0A286ZP18/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q1N5K3-1", "protein_name": "Kelch domain-containing protein 1", "gene_name": "KLHDC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MADSQLFCVAEERSGHCAVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWTMHLMEGELPTSMSGSCGACINGKLYVFGGYDDKGYSNRLYFVNLRTRDGTYVWEKITNFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHNELQDCFDVHDASWVRPPELFIAQTGFCMTEEQIFWGWHNDVHIFDTKTHSWLQPEIKGGIPPQPRAAHTCAVLGNKGYIFGGRVLQTRMNDLHYLNLDTWTWSGRIPINGENPKHRSWHTLTPIADDTLFLFGGLSADNIPLSDGWIHNVITNCWKQLTHLPKTKPRLWHTACLGKENEIMVFGGSKDDLLSLDTGHCNDLLIFQTQPYSLLRLCLDCIGKNAIILESQISLLPPKLLQQVLKKITFWTAANHREEQRAQKEETENKYQWISSN", "length": 422 }, "evidence": [ { "id": "A0A286ZP18", "url": "https://omabrowser.org/oma/group/A0A286ZP18/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q80YG3-1", "protein_name": "Kelch domain-containing protein 1", "gene_name": "Klhdc1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADPQAFCVAEERSGHCAVVDGHFLYVWGGYVSIEDNEVYLPNDEMWTYDIDSGLWKMHLMEGELPPSMSGSCGACIHGRLYVFGGYDDKGYSNRLYFVNLRTRDGTYTWEKITKFDGQPPTPRDKLSCWVYKDRLIYFGGYGYRRHSELQECFDVHDASWEEQIFWGWHNDVHVFDTKTRTWSQPEIKGGVPPQPRAAHSCAVLGNKGYVFGGRVLQTRMNDLHYLNLDTWVWSGRISVNGESPKHRSWHTLTAITDDKLFLFGGLNADNIPLSDGWIHNITTNCWKQLRHLPYTRPRLWHTACLGKENEIMVFGGSKDNLLFLDTGHCNDLLIFQTQPYSLLRSCLDCIGKNAIILKSQISLLPPKLLQQVLKKITFWTAANYRKEQRIRKEETENNQPRVSSC", "length": 406 }, "evidence": [ { "id": "A0A286ZP18", "url": "https://omabrowser.org/oma/group/A0A286ZP18/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N7A1-1", "protein_name": "Kelch domain-containing protein 1", "gene_name": "KLHDC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MADSQLFCVAEERSGHCAVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWRMHLMEGELPASMSGSCGACINGKLYIFGGYDDKGYSNRLYFVNLRTRDETYIWEKITDFEGQPPTPRDKLSCWVYKDRLIYFGGYGCRRHSELQDCFDVHDASWEEQIFWGWHNDVHIFDTKTQTWFQPEIKGGVPPQPRAAHTCAVLGNKGYIFGGRVLQTRMNDLHYLNLDTWTWSGRITINGESPKHRSWHTLTPIADDKLFLCGGLSADNIPLSDGWIHNVTTNCWKQLTHLPKTRPRLWHTACLGKENEIMVFGGSKDDLLALDTGHCNDLLIFQTQPYSLLRSCLDCIGKNSIMLESQISLLPPKLLQQVLKKITFWAAANHREEQRVQKEETENKYQWISSN", "length": 406 }, "evidence": [ { "id": "A0A286ZP18", "url": "https://omabrowser.org/oma/group/A0A286ZP18/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18" } ], "pmid": "" }, { "name": "ubiquitin ligase complex", "id": "GO:0000151", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000151", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18" } ], "pmid": "" }, { "name": "Cul5-RING ubiquitin ligase complex", "id": "GO:0031466", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031466", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "ubiquitin-dependent protein catabolic process via the C-end degron rule pathway", "id": "GO:0140627", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140627", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP18", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP18" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZP18-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 406, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZP18-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZP18" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZP19-1", "uniprot_ac": "A0A286ZP19", "uniprot_id": "A0A286ZP19_PIG", "mass": { "chemical_mass": 16368.0, "monoisotopic_mass": 16368.0 }, "refseq": { "ac": "XP_013845676", "name": "keratin-associated protein 12-1-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845676" }, "gene_names": [ { "name": "LOC106508044", "type": "recommended", "evidence": [ { "id": "A0A286ZP19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP19" } ] }, { "name": "LOC106508044", "type": "synonym", "evidence": [ { "id": "XP_013845676", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845676" } ] } ], "protein_names": [ { "name": "Keratin-associated protein 12-1-like", "type": "recommended", "evidence": [ { "id": "A0A286ZP19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP19/entry#names_and_taxonomy" } ] }, { "name": "keratin-associated protein 12-1-like", "type": "synonym", "evidence": [ { "id": "XP_013845676", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845676" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP19" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC106508044", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP19", "locus": {} } ], "crossref": [ { "id": "A0A286ZP19", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZP19", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000037222", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037222", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "106508044", "url": "https://www.ncbi.nlm.nih.gov/gene/106508044", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ssc:106508044", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106508044", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZP19", "url": "https://www.orthodb.org/?gene=A0A286ZP19", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013845676", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845676", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZP19", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP19", "database": "UniProtKB", "categories": [ 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CANONICAL=A0A286ZP19-1" }, "locus": { "chromosome": "13", "start_pos": 207393877, "end_pos": 207393407, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063110.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063110.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033217.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033217.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZP39-1", "uniprot_ac": "A0A286ZP39", "uniprot_id": "A0A286ZP39_PIG", "mass": { "chemical_mass": 69637.0, "monoisotopic_mass": 69637.0 }, "refseq": { "ac": "XP_020946121", "name": "tigger transposable element-derived protein 5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946121" }, "gene_names": [ { "name": "TIGD5", "type": "recommended", "evidence": [ { "id": "A0A286ZP39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39" } ] }, { "name": "TIGD5", "type": "synonym", "evidence": [ { "id": "XP_020946121", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946121" } ] } ], "protein_names": [ { "name": "Tigger transposable element derived 5", "type": "synonym", "evidence": [ { "id": "A0A286ZP39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39/entry#names_and_taxonomy" } ] }, { "name": "tigger transposable element-derived protein 5", "type": "synonym", "evidence": [ { "id": "XP_020946121", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946121" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TIGD5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39", "locus": { "chromosome": "4", "start_pos": 967370, "end_pos": 969283, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000040119", "url": "https://www.ensembl.org/id/ENSSSCG00000040119" } ] } } ], "crossref": [ { "id": "A0A286ZP39", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZP39", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000040119", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000040119", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "110260410", "url": "https://www.ncbi.nlm.nih.gov/gene/110260410", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004875", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004875", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006600", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006600", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007889", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007889", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050863", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050863", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110260410", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260410", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AYKCLAP", "url": "https://omabrowser.org/oma/group/AYKCLAP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZP39", "url": "https://www.orthodb.org/?gene=A0A286ZP39", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19303", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19303", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19303:SF56", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19303:SF56", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03184", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03184", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03221", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03221", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04218", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04218", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020946121", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946121", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZP39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZP39-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYPAGPPACSAPRRGRRPPPGRPTQPLRTPTPALVPAARPPPPAAGPRPRGAVKMAFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYSWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAEPPAAGPAPGPPVKQEPVQHPRAGPLPHRVLNAPAPAEGGYGDEQIYNANVTGLYWKLLPEQASPLGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVRRYLRRSCLQQKAVLLVAHPPCPSPTSRMPALEDSDETPRRCRPEPQGPPEELQTPDGAVRVLFLSRGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCAGGSPLDFMRSFMLKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPRPVEERAGQPAGQAEEVLSDLTHLAALAYKRLAPEEVAEWLHLDDDGGLPDGCREDSGPSRPPVLVPGAPPTPGSPPPVVAGGEEEEEEATVPTAGEAVRGLETALRWLESRDPQEVGPLKLVQLRSLISMARRLGGIGPSPAVPDDGV", "length": 637, "header": "tr|A0A286ZP39-1|A0A286ZP39_PIG Isoform 1 of Tigger transposable element derived 5 OS=Sus scrofa OX=9823 GN=TIGD5 PE=3 SV=3 CANONICAL=A0A286ZP39-1" }, "isoforms": [ { "isoform_ac": "A0A286ZP39-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39/entry#A0A286ZP39-1", "sequence": { "sequence": "MYPAGPPACSAPRRGRRPPPGRPTQPLRTPTPALVPAARPPPPAAGPRPRGAVKMAFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYSWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAEPPAAGPAPGPPVKQEPVQHPRAGPLPHRVLNAPAPAEGGYGDEQIYNANVTGLYWKLLPEQASPLGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVRRYLRRSCLQQKAVLLVAHPPCPSPTSRMPALEDSDETPRRCRPEPQGPPEELQTPDGAVRVLFLSRGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCAGGSPLDFMRSFMLKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPRPVEERAGQPAGQAEEVLSDLTHLAALAYKRLAPEEVAEWLHLDDDGGLPDGCREDSGPSRPPVLVPGAPPTPGSPPPVVAGGEEEEEEATVPTAGEAVRGLETALRWLESRDPQEVGPLKLVQLRSLISMARRLGGIGPSPAVPDDGV", "length": 637, "header": "tr|A0A286ZP39-1|A0A286ZP39_PIG Isoform 1 of Tigger transposable element derived 5 OS=Sus scrofa OX=9823 GN=TIGD5 PE=3 SV=3 CANONICAL=A0A286ZP39-1" }, "locus": { "chromosome": "4", "start_pos": 969283, "end_pos": 967373, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049615.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049615.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033234.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033234.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 560, "start_aa": "Thr", "end_pos": 560, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr560", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 629, "start_aa": "Ser", "end_pos": 629, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser629", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP39", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP39" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110260410", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110260410", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y6L1-1", "protein_name": "Tigger transposable element derived 5", "gene_name": "TIGD5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGEEEEVGGGAAGMAGGQQGGGGGGGGGGTSNGRGTSSGGGGTSNGGGTTNGGGGGGGTSNGGGGGTSNGGGTSNGGGGGTSNGGGTSNGCVGGGTSDGSGGGGGSSNGGGISNGGGVGVSMKMAFRRAYSIKDKLHAIERVKKGERQASVCRAFGVPGGTLRGWLKDEAKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEGALHAEPERASVAHPNLPPTPGSDTGGYGDEQIYNANITGLYWKLLPGRTAPRQRVTVLLAANLTGTHKLKPLVVGGLRDPPSLCHHNQEKFPAGYRYSPEARLGPALLRVWFFEDFVPCVKRYLRRSCLQQKAVLLLTSPPSSGGRHEDLPQLQTPDGSIRALFLSKSPTGSSSTGGGSRIPAPLEQGVVSAFKQLYKRELLRLAISAGGPVDFARSFLLKDMLYLAGLSWDLIPPNAIEKCWLLGLRAAFEPQPGEEERGGGGDCATGEEGNGDGKVFSDLTQLAALAYKRLAPEEVANWLHLDDMAPGTGEDDEDAMEEGPGGCKEEEEGAGGGGNEAGEGGSPLMPTAHEAIRGLETALRWLEGQDPRRVGPLKLVQLRSLISMAQRLHHGSSPDP", "length": 664 }, "evidence": [ { "id": "A0A286ZP39", "url": "https://omabrowser.org/oma/group/A0A286ZP39/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9RX55-1", "protein_name": "Tigger transposable element derived 5", "gene_name": "TIGD5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MYSAGPPAVPAPRRCRRPPPGRPMQPPRPPAPAPVPAARPPPPAPGPRPRVAVKMAFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYSWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAEPVAAGPAPGPPVNQEPAQPTRAGPLPDRAASTPAPAEGGYGDEQIYNANVTGLYWKLLPEQAAPVGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVRRYLRRSCLQQKAVLLVAHPPCPSSEARMPALEESEETRRRCRPEPTGPPEELQTPDGAVRVLFLCRGSGRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCAGGSPLDFMRSFMLKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPRPVEERAGQPAGQAEEAAEHSRVLSDLTHLAALAYKRLAPEEVAEWLHLDDDGGLPDGGREDWGPSRPPVLVPGGPLLPASLPSAVAGGAEEEEEEAIPTAGEAVRGLETALRWLETQDPREVGPLKLVQLRSLISTARRLGGIGPSPMVPDDGL", "length": 643 }, "evidence": [ { "id": "A0A286ZP39", "url": "https://omabrowser.org/oma/group/A0A286ZP39/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "B1WC39-1", "protein_name": "Tigger transposable element derived 5", "gene_name": "Tigd5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYPASPSAGPALHPVPHRARLPRPRCLAEPPRSPAPGPGSTARPPPPAPGPRPRVAVKMTFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLDQLGGEVGTQRKKMRLANEEEIDRAVYSWFLTLRQHGVPLSGPVIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAEPPVAGPAPVKEEPAQPSSAGLLLDGTPATLPHSEGGYGDEQIYNANVTGLYWRLLPEQNATPGTGDSREPGECSRRWCSDRVTVLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQQKAVLLVAHPPCPSWTTSMPAVEESEGTPRQCQPELLGSPEELQTPDGAVRVLFLSRGNSRAHIPAPLEHGVVAAFKHLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPGQQPAHQVEEAAEHSRMLSDLTHLAALAYKRLAPEEVAEWLHLDDDGGLPEGCGEEVAPAAPPSPASLPSSIGAGEEEEEEATEQGGVLVPTAGEAVWGLETALRWLESQDPREVGPLRLVQLRSLITMARRLGGIGPSAAASDDGV", "length": 642 }, "evidence": [ { "id": "A0A286ZP39", "url": "https://omabrowser.org/oma/group/A0A286ZP39/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q499M4-1", "protein_name": "Tigger transposable element derived 5", "gene_name": "Tigd5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MYPASPPAGPALHPVPHRARLPQPRCLAEPPRSPAPGPGSTARPPPPPAPGPRPRVAVKMTFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLDQLGGEVGTQRKKMRLANEEEIDRAVYSWFLTLRQHGVPLSGPVIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRIYGEAESPVAGPAPVKEEPAQSPGAVLVPDGAPATLPHSEGGYGDEQIYNANVTGLYWRLLPEQASTPGTGDSKEPGGCSRRWRSDRVTVLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQQKAVLLVAHPPCPSWATSMPPLEESEETPRQCQPELLGSPEELQTPDGAVRVLFLSKGTSRAHIPAPLEHGVVAAFKHLYKRELLRLAVSCASGSPLDFMRSFVLKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPGQQPAHQVEETAEHSRVLSDLTHLAALAYKRLAPEEVAQWLHLDDDGGLPEGCREEVAPAAPPSPASLPSSIGAGEEEEEATEQGGVLVPTAGEAVWGLETALRWLESQDPREVGPLRLVQLRSLITMARRLGGIGPSAVTSDDGV", "length": 642 }, "evidence": [ { "id": "A0A286ZP39", "url": "https://omabrowser.org/oma/group/A0A286ZP39/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q53EQ6-1", "protein_name": "Tigger transposable element-derived protein 5", "gene_name": "TIGD5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MYPAGPPAGPVPRRGRRPLPGPPAPAPAPVPAARPPPPAPGPRPRVAVKMAFRKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEVAEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGEDEEEATDYGGTSVPTAGEAVRGLETALRWLENQDPREVGPLRLVQLRSLISMARRLGGIGHTPAGPYDGV", "length": 642 }, "evidence": [ { "id": "A0A286ZP39", "url": "https://omabrowser.org/oma/group/A0A286ZP39/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": 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{ "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZP97-1", "uniprot_ac": "A0A286ZP97", "uniprot_id": "A0A286ZP97_PIG", "mass": { "chemical_mass": 62567.0, "monoisotopic_mass": 62567.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF467", "type": "recommended", "evidence": [ { "id": "A0A286ZP97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ] } ], "protein_names": [ { "name": "Zinc finger protein 467", "type": "recommended", "evidence": [ { "id": "A0A286ZP97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Transcription factor that promotes adipocyte differentiation and suppresses osteoblast differentiation in the bone marrow. Enhances the osteoclast-supporting ability of stromal cells. Binds with STAT3 the consensus sequence 5'-CTTCTGGGAAGA-3' of the acute phase response element (APRE). Transactivates several promoters including FOS, OSM and PPARG. Recruits a histone deacetylase complex.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97#function" }, { "database": "UniProtKB", "id": "ARBA00053501", "url": "https://www.uniprot.org/uniprotkb/ARBA00053501#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF467", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97", "locus": { "chromosome": "18", "start_pos": 55775264, "end_pos": 55783421, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000039041", "url": "https://www.ensembl.org/id/ENSSSCG00000039041" } ] } } ], "crossref": [ { "id": "A0A286ZP97", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZP97", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000039041", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000039041", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "QCAQCTR", "url": "https://omabrowser.org/oma/group/QCAQCTR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZP97-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRESLEGLSSLGFSVGQPEMAPQTEPGEGSHNSQEHMAPPQEEKALGTCSGCEAPRPEEGAPTEQAEAPSRGSRAYAPRKAEPMGSCPGDEWMIRKVKVEEEDQEAEEEAEWPQHLSLISSPFPAPDLGPLAATYKLEPGVPGTLGGLALAGWVPTSEKPYGCGECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCPECEKRFRKKTHLIRHQRIHTGERPYQCAQCARSFTHKQHLVRHQRVHEAAGRSPPGPKPFSCSDCGLSFSWKKNPATHQGLHGSRGRPFGCDECALGATVDPAATEPLACAPRSAAAPEGAPTSERSFFCPDCGRGFAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARRFSSKTNLVRHQAIHTGSRPFSCPQCGKSFSRKTHLVRHERIHGGAAHPASESDLSAPAWPTPTEVAAPTLLF", "length": 568, "header": "tr|A0A286ZP97-1|A0A286ZP97_PIG Isoform 1 of Zinc finger protein 467 OS=Sus scrofa OX=9823 GN=ZNF467 PE=3 SV=1 CANONICAL=A0A286ZP97-1" }, "isoforms": [ { "isoform_ac": "A0A286ZP97-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97/entry#A0A286ZP97-1", "sequence": { "sequence": "MRESLEGLSSLGFSVGQPEMAPQTEPGEGSHNSQEHMAPPQEEKALGTCSGCEAPRPEEGAPTEQAEAPSRGSRAYAPRKAEPMGSCPGDEWMIRKVKVEEEDQEAEEEAEWPQHLSLISSPFPAPDLGPLAATYKLEPGVPGTLGGLALAGWVPTSEKPYGCGECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCPECEKRFRKKTHLIRHQRIHTGERPYQCAQCARSFTHKQHLVRHQRVHEAAGRSPPGPKPFSCSDCGLSFSWKKNPATHQGLHGSRGRPFGCDECALGATVDPAATEPLACAPRSAAAPEGAPTSERSFFCPDCGRGFAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARRFSSKTNLVRHQAIHTGSRPFSCPQCGKSFSRKTHLVRHERIHGGAAHPASESDLSAPAWPTPTEVAAPTLLF", "length": 568, "header": "tr|A0A286ZP97-1|A0A286ZP97_PIG Isoform 1 of Zinc finger protein 467 OS=Sus scrofa OX=9823 GN=ZNF467 PE=3 SV=1 CANONICAL=A0A286ZP97-1" }, "locus": { "chromosome": "18", "start_pos": 55781119, "end_pos": 55775267, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064777.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064777.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033285.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033285.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 557, "start_aa": "Thr", "end_pos": 557, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr557", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9RXT6-1", "protein_name": "Zinc finger protein 467", "gene_name": "ZNF467", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRETLEALSSLGLSVGQPEMTPQSEPGEQSHDAQERMSPPQEQRVLGTSSGREAPRPEKGARTEQAETPCREDQVCAPRKPEPTGSCPGDEWMIRKVKVEEEEEDREAHKEAEWPQHLALRPSPFPPPDLGSLAAAYKLESGAPGTLGGLALAGWVPTASEKPYGCGECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHLLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCPECEKRFRKKTHLIRHQRIHTGERPYKCAQCARSFTHKQHLVRHQRVHAAAGRTPPSPGAPASPTSSASSPTASPPGPKPFSCSHCGLSFGWKKNLTTHQRLHSGEERPFGCDECALGAPVDPAAPEPLACAPRGTPALPGTPGGERSFLCPECGRSFAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARSFSSKTNLVRHQAVHTGSRPFPCPQCGKSFSRKTHLVRHQRIHGGAAHPASGSDLSSPAWPTSTDVTAPALFF", "length": 591 }, "evidence": [ { "id": "A0A286ZP97", "url": "https://omabrowser.org/oma/group/A0A286ZP97/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5RJR4-1", "protein_name": "Zinc finger protein 467", "gene_name": "Znf467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNPQEKMSSRDESTLHSCSGPETPGQKEGIHTEQAEAPCMGSQACIPQKAEPASSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLGQLAVAYKLEPGTPGTLGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQRVHDAASRTRSSPDIPATPHPPTASLAPSPTGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPFGCDECALGTNVDPAAEPSACTPHAPDCGPGSGPVAPQRTTSSERSFFCPDCGRGFAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARCFSSKTNLVRHQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGEAALPASASNLSAPAWSNPSEVVPPPIFF", "length": 594 }, "evidence": [ { "id": "A0A286ZP97", "url": "https://omabrowser.org/oma/group/A0A286ZP97/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7Z7K2-1", "protein_name": "Zinc finger protein 467", "gene_name": "ZNF467", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRETLEALSSLGFSVGQPEMAPQSEPREGSHNAQEQMSSSREERALGVCSGHEAPTPEEGAHTEQAEAPCRGQACSAQKAQPVGTCPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSLLPSPFPAPDLGHLAAAYKLEPGAPGALSGLALSGWGPMPEKPYGCGECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCAQCARSFTHKQHLVRHQRVHQTAGPARPSPDSSASPHSTAPSPTPSFPGPKPFACSDCGLSFGWKKNLATHQCLHRSEGRPFGCDECALGATVDAPAAKPLASAPGGPGCGPGSDPVVPQRAPSGERSFFCPDCGRGFSHGQHLARHPRVHTGERPFACTQCDRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARSFSSKTNLVRHQAIHTGSRPFSCPQCGKSFSRKTHLVRHQLIHGEAAHAAPDAALAAPAWSAPPEVAPPPLFF", "length": 595 }, "evidence": [ { "id": "A0A286ZP97", "url": "https://omabrowser.org/oma/group/A0A286ZP97/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8JZL0-1", "protein_name": "Zinc finger protein 467", "gene_name": "Znf467", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNAQEKMSSRGESTLHSCSGHETPGQKEGIHTEQAEAPCMGSQASTPQKAEPAGSVPGEEWMIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLGQLAVTYKLEPGTPGALGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPDCGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQRVHDAASRTRSSPDIPVAPHSPTASLTPSPPGPKPFACSHCGQSFGWKKNLATHQSLHLTEGRPFGCDECALGTNVDPAAEPSACTPHAPDCGPGSGPAAPQRTTSSERSFFCPDCGRGFAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKSHLGRHQAVHTGSRPHACAVCARCFSSKTNLVRHQAIHTGSRPFSCPQCAKSFSRKTHLVRHQRIHGDAALPAPASNLSAPAWSNPSEVVPPPIFF", "length": 594 }, "evidence": [ { "id": "A0A286ZP97", "url": "https://omabrowser.org/oma/group/A0A286ZP97/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZP97", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP97" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZP97-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 568, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": 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"url": "https://www.uniprot.org/uniprotkb/A0A286ZPG7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG7", "locus": {} } ], "crossref": [ { "id": "A0A286ZPG7", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZPG7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000040362", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000040362", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "A0A286ZPG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "HAKFFSGFHLFKEGAGLRRVATLDFPIALLETFELGSTLFQGPEEAILPEPLSHSLIHLAVSMTVSESLIKLSLTENCKECSGLFIAPVYTCHLLILKAPVILFHPAFSLSAGW", "length": 114, "header": "tr|A0A286ZPG7-1|A0A286ZPG7_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A286ZPG7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPG7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG7/entry#A0A286ZPG7-1", "sequence": { "sequence": "HAKFFSGFHLFKEGAGLRRVATLDFPIALLETFELGSTLFQGPEEAILPEPLSHSLIHLAVSMTVSESLIKLSLTENCKECSGLFIAPVYTCHLLILKAPVILFHPAFSLSAGW", "length": 114, "header": "tr|A0A286ZPG7-1|A0A286ZPG7_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A286ZPG7-1" }, "locus": { "chromosome": "1", "start_pos": 128089434, "end_pos": 128088277, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041823.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041823.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033491.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033491.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPG7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPG7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZPG7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 114, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZPG7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZPG7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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}, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZPH2-1", "uniprot_ac": "A0A286ZPH2", "uniprot_id": "A0A286ZPH2_PIG", "mass": { "chemical_mass": 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[], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NTN1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2", "locus": { "chromosome": "12", "start_pos": 54292193, "end_pos": 54089472, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017993", "url": "https://www.ensembl.org/id/ENSSSCG00000017993" } ] } } ], "crossref": [ { "id": "ENSSSCG00000017993", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017993", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00055", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00055", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd03579", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03579", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "733599", "url": "https://www.ncbi.nlm.nih.gov/gene/733599", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001134", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001134", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002049", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002049", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008211", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008211", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018933", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018933", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050440", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050440", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056863", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056863", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FSQFSMR", "url": "https://omabrowser.org/oma/group/FSQFSMR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10574", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10574", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10574:SF378", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10574:SF378", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00053", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00053", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00055", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00055", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01759", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01759", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24973", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24973", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020921916", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921916", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPH2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A555", "url": "https://www.uniprot.org/uniprotkb/A0A287A555", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A555-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A555-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLH3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLH3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SS89", "url": "https://www.uniprot.org/uniprotkb/F1SS89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SS89-1", "url": "https://www.uniprot.org/uniprotkb/F1SS89-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMRAVWEALAALAAVSCLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGASRIRRGDQNLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKKA", "length": 604, "header": "tr|A0A286ZPH2-1|A0A286ZPH2_PIG Isoform 1 of Netrin-1 OS=Sus scrofa OX=9823 GN=NTN1 PE=4 SV=2 CANONICAL=A0A286ZPH2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPH2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2/entry#A0A286ZPH2-1", "sequence": { "sequence": "MMRAVWEALAALAAVSCLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGASRIRRGDQNLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKKA", "length": 604, "header": "tr|A0A286ZPH2-1|A0A286ZPH2_PIG Isoform 1 of Netrin-1 OS=Sus scrofa OX=9823 GN=NTN1 PE=4 SV=2 CANONICAL=A0A286ZPH2-1" }, "locus": { "chromosome": "12", "start_pos": 54288672, "end_pos": 54106881, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041880.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041880.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033370.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033370.3" } ] } }, { "isoform_ac": "A0A287A555-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2/entry#A0A287A555-1", "sequence": { "sequence": "MMRAVWEALAALAAVSCLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRCAKGYQQSRSPIAPCISFVCAPPSPADCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGASRIRRGDQNLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKKA", "length": 596, "header": "tr|A0A287A555-1|A0A287A555_PIG Computationally mapped isoform of Netrin-1 OS=Sus scrofa OX=9823 GN=NTN1 PE=4 SV=2 CANONICAL=A0A286ZPH2-1" }, "locus": { "chromosome": "12", "start_pos": 54288672, "end_pos": 54106881, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059342.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059342.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038932.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038932.2" } ] } }, { "isoform_ac": "A0A5G2QLH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2/entry#A0A5G2QLH3-1", "sequence": { "sequence": "MMRAVWEALAALAAVSCLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRCAKGYQQSRSPIAPCISTREPPSGGGAWAGGGAFRRLVSPPPSSGGSADSRGSLRSEGPHETSPSPSVSLCSDKDEISCSPKGIRLLPFPRVLLPYSTLTLGLQGVGDLNQGRPLLLLRACQEPLPLADSEQKGRSPQGLGEKPGRAPMQAPTLRKDGSLPEVLEALAGQLSAPEMPEPGEGDEQGGRGHSGALR", "length": 631, "header": "tr|A0A5G2QLH3-1|A0A5G2QLH3_PIG Computationally mapped isoform of Netrin 1 OS=Sus scrofa OX=9823 GN=NTN1 PE=4 SV=1 CANONICAL=A0A286ZPH2-1" }, "locus": { "chromosome": "12", "start_pos": 54236702, "end_pos": 54106881, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072120.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072120.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065681.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065681.1" } ] } }, { "isoform_ac": "F1SS89-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2/entry#F1SS89-1", "sequence": { "sequence": "MMRAVWEALAALAAVSCLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGVTCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGASRIRRGDQNLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKEL", "length": 600, "header": "tr|F1SS89-1|A0A286ZPH2_PIG Computationally mapped isoform of Netrin-1 OS=Sus scrofa OX=9823 GN=NTN1 PE=4 SV=4 CANONICAL=A0A286ZPH2-1" }, "locus": { "chromosome": "12", "start_pos": 54292102, "end_pos": 54106881, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019582.4", "url": "https://www.ensembl.org/id/ENSSSCT00000019582.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019063.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019063.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SS89", "url": "https://www.uniprot.org/uniprotkb/F1SS89" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "O09118-1", "protein_name": "Netrin-1", "gene_name": "Ntn1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKKA", "length": 604 }, "evidence": [ { "id": "A0A286ZPH2", "url": "https://omabrowser.org/oma/group/A0A286ZPH2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O95631-1", "protein_name": "Netrin-1", "gene_name": "NTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKKA", "length": 604 }, "evidence": [ { "id": "A0A286ZPH2", "url": "https://omabrowser.org/oma/group/A0A286ZPH2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q90922-1", "protein_name": "Netrin-1", "gene_name": "NTN1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPRRGAEGPLALLLAAAWLAQPLRGGYPGLNMFAVQTAQPDPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRSCHLCNASDPKRAHPPSFLTDLNNPHNLTCWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCRKMYNKPSRAAITKQNEQEAICTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAAPPPTAASSTEEPADCDSYCKASKGKLKINMKKYCKKDYAVQIHILKAEKNADWWKFTVNIISVYKQGSNRLRRGDQTLWVHAKDIACKCPKVKPMKKYLLLGSTEDSPDQSGIIADKSSLVIQWRDTWARRLRKFQQREKKGKCRKA", "length": 606 }, "evidence": [ { "id": "A0A286ZPH2", "url": "https://omabrowser.org/oma/group/A0A286ZPH2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q924Z9-1", "protein_name": "Netrin-1", "gene_name": "Ntn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "basement membrane", "id": "GO:0005604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005604", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "dendrite development", "id": "GO:0016358", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016358", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "animal organ morphogenesis", "id": "GO:0009887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009887", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "regulation of synapse assembly", "id": "GO:0051963", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051963", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "tissue development", "id": "GO:0009888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009888", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "motor neuron axon guidance", "id": "GO:0008045", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008045", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" }, { "name": "chemorepulsion of axon", "id": "GO:0061643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061643", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 131, "end_pos": 133, "annotation": "n_glycosylation_sequon" }, { "start_pos": 417, "end_pos": 419, "annotation": "n_glycosylation_sequon" }, { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZPH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" }, { "id": "PS50027", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50027" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Laminin EGF-like", "eco_id": "ECO_0000259", "start_pos": 404, "end_pos": 453, "start_aa": "Cys", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZPH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH2" }, { "id": "PS51117", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51117" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Laminin N-terminal", "eco_id": "ECO_0000259", "start_pos": 47, "end_pos": 284, 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZPH9-1", "uniprot_ac": "A0A286ZPH9", "uniprot_id": "A0A286ZPH9_PIG", "mass": { "chemical_mass": 17418.0, "monoisotopic_mass": 17418.0 }, "refseq": {}, "gene_names": [ { "name": "FAM162B", "type": "recommended", "evidence": [ { "id": "A0A286ZPH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH9" } ] } ], "protein_names": [ { "name": "Family with sequence similarity 162 member B", "type": "synonym", "evidence": [ { "id": "A0A286ZPH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPH9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPH9", "url": 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"evidence": [ { "id": "A0A286ZPI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Component of the commander complex that is essential for endosomal recycling of transmembrane cargos; the commander complex is composed of the CCC subcomplex and the retriever subcomplex. Component of the retriever complex, which is a heterotrimeric complex related to retromer cargo-selective complex (CSC) and essential for retromer-independent retrieval and recycling of numerous cargos such as integrin alpha-5/beta-1 (ITGA5:ITGB1). The recruitment of the retriever complex to the endosomal membrane involves CCC and WASH complexes. In the endosomes, drives the retriever and recycling of NxxY-motif-containing cargo proteins by coupling to SNX17, a cargo essential for the homeostatic maintenance of numerous cell surface proteins associated with processes that include cell migration, cell adhesion, nutrient supply and cell signaling.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FIT5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIT5#function" }, { "database": "UniProtKB", "id": "ARBA00093280", "url": "https://www.uniprot.org/uniprotkb/ARBA00093280#function" }, { "database": "UniProtKB", "id": "A0A5G2QS49", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QS49#function" }, { "database": "UniProtKB", "id": "A0A286ZPI7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7#function" }, { "database": "UniProtKB", "id": "A0A287ADE5", "url": "https://www.uniprot.org/uniprotkb/A0A287ADE5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPI7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "VPS26C", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7", "locus": { "chromosome": "13", "start_pos": 200869167, "end_pos": 200926108, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000012063", "url": "https://www.ensembl.org/id/ENSSSCG00000012063" } ] } } ], "crossref": [ { "id": "ENSSSCG00000012063", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000012063", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100738307", "url": "https://www.ncbi.nlm.nih.gov/gene/100738307", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR014752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014756", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014756", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028934", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028934", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738307", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738307", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CVTMPIT", "url": "https://omabrowser.org/oma/group/CVTMPIT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZPI7", "url": "https://www.orthodb.org/?gene=A0A286ZPI7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1TRV9", "url": "https://www.orthodb.org/?gene=A0A4X1TRV9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12233", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12233", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03643", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03643", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZPI7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADE5", "url": "https://www.uniprot.org/uniprotkb/A0A287ADE5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ADE5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TRV9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TRV9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TRV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TRV9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TRY3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TRY3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TRY3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TRY3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QS49", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QS49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QS49-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QS49-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIT5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIT5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIT5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISGKDSVQHQGVSLTVEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTVEMAKPGKFPSGKTEIPFEFPLHVKGTKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHPDHLITENFPLKLCRM", "length": 297, "header": "tr|A0A286ZPI7-1|A0A286ZPI7_PIG Isoform 1 of Vacuolar protein sorting-associated protein 26C OS=Sus scrofa OX=9823 GN=VPS26C PE=1 SV=1 CANONICAL=A0A286ZPI7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7/entry#A0A286ZPI7-1", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISGKDSVQHQGVSLTVEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTVEMAKPGKFPSGKTEIPFEFPLHVKGTKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHPDHLITENFPLKLCRM", "length": 297, "header": "tr|A0A286ZPI7-1|A0A286ZPI7_PIG Isoform 1 of Vacuolar protein sorting-associated protein 26C OS=Sus scrofa OX=9823 GN=VPS26C PE=1 SV=1 CANONICAL=A0A286ZPI7-1" }, "locus": { "chromosome": "13", "start_pos": 200926011, "end_pos": 200874332, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066009.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066009.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033516.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033516.1" } ] } }, { "isoform_ac": "A0A287ADE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7/entry#A0A287ADE5-1", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISGKDSVQHQGVSLTVEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTVEMAKPGKFPSGKTEIPFEFPLHVKGTKVLYETYHGVFVNIQPQKGKLTPSPVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHPDHLITENFPLKLCRM", "length": 270, "header": "tr|A0A287ADE5-1|A0A287ADE5_PIG Computationally mapped isoform of Vacuolar protein sorting-associated protein 26C OS=Sus scrofa OX=9823 GN=VPS26C PE=1 SV=1 CANONICAL=A0A286ZPI7-1" }, "locus": { "chromosome": "13", "start_pos": 200926011, "end_pos": 200874332, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063758.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063758.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041851.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041851.2" } ] } }, { "isoform_ac": "A0A4X1TRV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7/entry#A0A4X1TRV9-1", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISGKDSVQHQGVSLTVEGTVNLQLSAKSVGVFEAFYNSVKYTLRCDMKRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHPDHLITENFPLKLCRM", "length": 247, "header": "tr|A0A4X1TRV9-1|A0A4X1TRV9_PIG Computationally mapped isoform of VPS26 endosomal protein sorting factor C OS=Sus scrofa OX=9823 GN=VPS26C PE=1 SV=1 CANONICAL=A0A286ZPI7-1" }, "locus": { "chromosome": "13", "start_pos": 200926011, "end_pos": 200874332, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059080.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059080.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050592.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050592.1" } ] } }, { "isoform_ac": "A0A4X1TRY3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7/entry#A0A4X1TRY3-1", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGPIQIINSTVEMAKPGKFPSGKTEIPFEFPLHVKGTKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHPDHLITENFPLKLCRM", "length": 249, "header": "tr|A0A4X1TRY3-1|A0A4X1TRY3_PIG Computationally mapped isoform of VPS26 endosomal protein sorting factor C OS=Sus scrofa OX=9823 GN=VPS26C PE=1 SV=1 CANONICAL=A0A286ZPI7-1" }, "locus": { "chromosome": "13", "start_pos": 200926011, "end_pos": 200874332, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013195.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013195.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012843.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012843.3" } ] } }, { "isoform_ac": "A0A5G2QS49-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7/entry#A0A5G2QS49-1", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISGKDSVQHQGVSLTVEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTVEMAKPGKFPSGKTEIPFEFPLHVKGTKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPRLFTCPTLETTNFKVGL", "length": 272, "header": "tr|A0A5G2QS49-1|A0A286ZPI7_PIG Computationally mapped isoform of Vacuolar protein sorting-associated protein 26C OS=Sus scrofa OX=9823 GN=VPS26C PE=1 SV=2 CANONICAL=A0A286ZPI7-1" }, "locus": { "chromosome": "13", "start_pos": 200926011, "end_pos": 200878550, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081617.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081617.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067627.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067627.2" } ] } }, { "isoform_ac": "A0A8W4FIT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPI7/entry#A0A8W4FIT5-1", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISGKDSVQHQGVSLTVEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTVEMAKPGKFPSGKTEIPFEFPLHVKGTKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQLVRVETCGKAVQKAMPAMPLRFRTSRSPTGTCVGASLCPYTWSSPGCSPARRWRPPTSKWVGALPSGSRAHMAWARAGDRELCEGH", "length": 298, "header": "tr|A0A8W4FIT5-1|A0A8W4FIT5_PIG Computationally mapped isoform of Vacuolar protein sorting-associated protein 26C OS=Sus scrofa OX=9823 GN=VPS26C PE=1 SV=1 CANONICAL=A0A286ZPI7-1" }, "locus": { "chromosome": "13", "start_pos": 200926011, "end_pos": 200878477, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094058.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094058.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078223.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078223.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QS49", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QS49" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738307", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738307", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M4M6-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", "gene_name": "Vps26c", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGTSLDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQILSSTIDVLKPGKLPSGKTEIPFEFPLHVKGSKVLYETYHGVFVNIQYTLRCDMRRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPETLQNVKERASLPKFLIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIADGDICRSLSVPLYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHADHLITENFPLKLCRT", "length": 297 }, "evidence": [ { "id": "A0A286ZPI7", "url": "https://omabrowser.org/oma/group/A0A286ZPI7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BSI1-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", "gene_name": "DSCR3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGTALDIKIKRANKVYRCGEILSGVVVITSKDTVQHQGISLTMEGSVNLQLSAKSVGVFEAFYNSVKPIQIINSTIEMVKPGKLPSGKTEIPFEFPLHVKGNKVLYETYHGVFVNIQYTLRCDMRRSLLAKDLTKTCEFIVHSLSQKGKLTPSPVDFTITPETLQNVKERASLPKFLIRGHLSSTNCVITQPLTGELVVESAEAAVKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLPIPIYMVFPRLFTCPTLETTNFKVEFEVNIVVLLHDDHLITENFPLKLCRM", "length": 297 }, "evidence": [ { "id": "A0A286ZPI7", "url": "https://omabrowser.org/oma/group/A0A286ZPI7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E9PU42-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", "gene_name": "Vps26c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVLYETYHGVFVNIQYTLRCDMRRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPETLQNVKERASLPKFLIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIADGDICRNLSVPLYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHADHLITENFPLKLCRT", "length": 297 }, "evidence": [ { "id": "A0A286ZPI7", "url": "https://omabrowser.org/oma/group/A0A286ZPI7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F4HYH6-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", "gene_name": "VPS26C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATATTVNVKLSRSNRIYRSSEPVEGKIVIKSATSISHQAIRLSVNGSVNLQVRGGSAGVIESFYGVIKPIQIVKKTIEVKSSGKIPPGTTEIPFSLNLREPGEGIVEKFYETFHGTNINIQYLLTADIPRGYLHKPLSATMEFIIESGRVDLPERPIPPEIVIFYITQDTQRHPLLPDIKTGGFRVTGKLATQCSLQDPLSGELTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQSTQIADGDVCRNMTLPIYVLLPRLLMCPSVFAGPFSVEFKVCITISFKSKLAKAQPKSDPTAPRLWMALERLPLELVRTKRDQFSC", "length": 327 }, "evidence": [ { "id": "A0A286ZPI7", "url": "https://omabrowser.org/oma/group/A0A286ZPI7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O14972-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", "gene_name": "VPS26C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGTALDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQKGKFTPSPVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVVLLHPDHLITENFPLKLCRI", "length": 297 }, "evidence": [ { "id": "A0A286ZPI7", "url": "https://omabrowser.org/oma/group/A0A286ZPI7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O35075-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", "gene_name": "Vps26c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGTTLDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVLYETYHGVFVNIQYTLRCDMRRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPETLQNVKERASLPKFFIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIADGDICRNLSVPLYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHADHLITENFPLKLCRT", "length": 297 }, "evidence": [ { "id": "A0A286ZPI7", "url": "https://omabrowser.org/oma/group/A0A286ZPI7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54DI8-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", "gene_name": "vps26c", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNVLDLKLKKIDKIYRPGSKVSGNVVINSKDDMSHSGVTIVVEGTVQLQLSSKSVGLFEAFYNSLKPITLMHYTISVTNGGGKFQAGITELPFEFTLEPLPNQQLYDTYHGVFVNIQYSIKCDVKRGILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNITPDSLVNFKKISKADVPTFKISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTEIQNIQIADGDIWRNFKIPLYMVFPRLFTCISTAGKTFKIEFEVNLVIMLEDGHLITENFPIKLIR", "length": 304 }, "evidence": [ { "id": "A0A286ZPI7", "url": "https://omabrowser.org/oma/group/A0A286ZPI7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9VPC3-1", "protein_name": "Vacuolar protein sorting-associated protein 26C", 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"UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9" } ] } ], "protein_names": [ { "name": "SPEM family member 2", "type": "synonym", "evidence": [ { "id": "A0A286ZPK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPK9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SPEM2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9", "locus": { "chromosome": "12", "start_pos": 52730822, "end_pos": 52728826, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024584", "url": "https://www.ensembl.org/id/ENSSSCG00000024584" } ] } } ], "crossref": [ { "id": "A0A286ZPK9", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZPK9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024584", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024584", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR031368", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031368", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR34834", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34834", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34834:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34834:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15670", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15670", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZPK9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9", 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"tr|A0A286ZPK9-1|A0A286ZPK9_PIG Isoform 1 of SPEM family member 2 OS=Sus scrofa OX=9823 GN=SPEM2 PE=4 SV=2 CANONICAL=A0A286ZPK9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9/entry#A0A286ZPK9-1", "sequence": { "sequence": "MENQLWHDHLGCCHQYQESTQNAEDLLLLLLGLVVLVNIGINMATVMWQGLQNVLDKIAHWTNDKNEVLQACERSPKYPPAKAHDVHLHCTLDPVEVKMAQPTRYSSFSYHHLCNRSRRRRRRRRSRCRPPHRPRYPQTVPLQPLGLPKPHGSHKMAQLRPVSSFDPEDLDSYLEEEDLSPPRPKYLPGGWGGGLYPQMGLPSNVGLWGRQGGILASLPPPSLYLSPELRRLPKRVEAKSELRLQSYGPPYSPSRIWGNVEAEQWTSSLPPPRRLPPNPSWVPGGHSPYPSRGQLPYDSWDQRRRGLEGSEPPSALVTRGSRPEAREHSSPHSPRRSLPGQPHGQPNRSPHPSTGHLIYSRDPHEVRRRGAEWAEALPTRHPLTTSTSLTMLGEASYQRAPAPSSALLLRSSQPLPEVQATEPPPPPPTFMPLSRNPGGNANHQVYDSLELKRQVQESRARANSLPPSTSASRPSLHRSRKIN", "length": 483, "header": "tr|A0A286ZPK9-1|A0A286ZPK9_PIG Isoform 1 of SPEM family member 2 OS=Sus scrofa OX=9823 GN=SPEM2 PE=4 SV=2 CANONICAL=A0A286ZPK9-1" }, "locus": { "chromosome": "12", "start_pos": 52730819, "end_pos": 52729025, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060607.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060607.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033412.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033412.2" } ] } }, { "isoform_ac": "I3LTP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9/entry#I3LTP7-1", "sequence": { "sequence": "MENQLWHDHLGCCHQYQESTQNAEDLLLLLLGLVVLVNIGINMATVMWQGLQNVLDKIAHWTNDKRPGLLPGGGGPFPPTSQVPAGGLGRRALPADGPALQRGALGPPGWDPGQPAATLSLPVTRAAPPAQACGGQVGTEAAVLRAPLLTVPHLGQRGGRAVDLVSAAPPPAAPKPLLGPWGAQPLPLTGPAPV", "length": 194, "header": "tr|I3LTP7-1|A0A286ZPK9_PIG Computationally mapped isoform of SPEM family member 2 OS=Sus scrofa OX=9823 GN=SPEM2 PE=4 SV=3 CANONICAL=A0A286ZPK9-1" }, "locus": { "chromosome": "12", "start_pos": 52730260, "end_pos": 52729025, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025897.4", "url": 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"https://www.uniprot.org/uniprotkb/I3LTP7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPK9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPK9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 115, "end_pos": 117, "annotation": "n_glycosylation_sequon" }, { "start_pos": 347, "end_pos": 349, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZPK9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 483, "overlap": "1.0", "method": 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"url": "https://www.uniprot.org/uniprotkb/A0A286ZPN5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZPN5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 119, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZPN5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZPN5" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", 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"uniprot_canonical_ac": "A0A286ZPP1-1", "uniprot_ac": "A0A286ZPP1", "uniprot_id": "A0A286ZPP1_PIG", "mass": { "chemical_mass": 21422.0, "monoisotopic_mass": 21422.0 }, "refseq": { "ac": "XP_005666588", "name": "PRELI domain containing protein 3B-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666588" }, "gene_names": [ { "name": "LOC100525472", "type": "synonym", "evidence": [ { "id": "XP_005666588", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666588" } ] } ], "protein_names": [ { "name": "PRELI/MSF1 domain-containing protein", "type": "recommended", "evidence": [ { "id": "A0A286ZPP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPP1/entry#names_and_taxonomy" } ] }, { "name": "PRELI domain containing protein 3B-like", "type": "synonym", "evidence": [ { "id": "XP_005666588", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666588" } ] } ], "function": [], "disease": [], "snv": [], 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] }, { "id": "IPR037365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525472", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525472", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YCPWNEK", "url": "https://omabrowser.org/oma/group/YCPWNEK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZPP1", "url": "https://www.orthodb.org/?gene=A0A286ZPP1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11158", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11158", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005666588", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666588", 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"https://omabrowser.org/oma/group/A0A286ZPP1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q58DB0-1", "protein_name": "PRELI domain containing protein 3B", "gene_name": "PRELID3B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIVKSIIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTILTQEAIITVKGVSLGSYLEGLMASTISSNANKGREAMEWVIHKLNAEIEELTASARGSIRTPMAAAAFVEK", "length": 194 }, "evidence": [ { "id": "A0A286ZPP1", "url": "https://omabrowser.org/oma/group/A0A286ZPP1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6P9U4-1", "protein_name": "PRELI domain containing protein 3B", "gene_name": "Prelid3b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHVDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPIRRTMELKSTNISFTNMVSVDERLTYKPHPQDPEKTVLTQEALITVKGVSLSSYLEGLMASTISSNANKGREAMEWVIHKLNAEIEELAASARGSIRTPMAAAAALVDK", "length": 195 }, "evidence": [ { "id": "A0A286ZPP1", "url": "https://omabrowser.org/oma/group/A0A286ZPP1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CYY7-1", "protein_name": "PRELI domain containing protein 3B", "gene_name": "Prelid3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHVDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVTRTMELKSTNISFTNMVSVDERLTYKPHLQDPEKTVLTQEALITVKGVSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEELAASARGSIRTPMAAAAALVDK", "length": 195 }, "evidence": [ { "id": "A0A286ZPP1", "url": "https://omabrowser.org/oma/group/A0A286ZPP1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FYA3-1", "protein_name": "MSF1-like family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKLDTETGKLHTTRALTIHAPGPWFLHRIIGQDICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEERIRYDPHPDNPSAWTVCSQETSIRIKPLSALASMAEKVEQKCAEKFMQNSAKGREVMERICKYMEAESARI", "length": 183 }, "evidence": [ { "id": "A0A286ZPP1", "url": "https://omabrowser.org/oma/group/A0A286ZPP1/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9V3U9-1", "protein_name": "Protein slowmo", "gene_name": "slmo", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYFPKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEVTESARKSMDEISAQAAKAAKAMHIT", "length": 215 }, "evidence": [ { "id": "A0A286ZPP1", "url": 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEDLVTFGDVAVDFSQEEWEWLSPAQRHLYRKVMLENYRSLVSLGVSASKPDVISLLEQGKEPWMMKKEGTRRACPDWEYASKNNEFSSKQVTYEESSKVVIMARSHLSYNLDCSSLRENCTSEDWCKNQLRSQEVHPGQLMITHKEILNVEQSNEYTKSWQTFHQGAIFDIKQSFPTKERIHKHEPQKRRYQKKPAEMKRKKVYVEKKLLKCNECEKVFNQTSSLTLHQRIHTGEKPYACVECGKTFSQSANLAQHKRIHTGEKPYECKECRKAFSQNAHLAQHQRVHTGEKPYQCKECKKAFSQIAHLTQHQRVHTGERPFECIECGKAFSNGSFLAQHQRIHTGEKPYVCSVCGKAFSHRGYLIVHQRIHTGERPYECKECRKTFSQYAHLAQHQRVHTGEKPYECKVCRKAFSQIAYLDQHQRVHTGEKPYECIECGKAFSNSSSLAQHQRSHTGEKPYMCKECRKTFSQNAGLAQHQRIHTGEKPYECNICGKAFSYSGSLTLHQRIHTGERPYECKDCRKSFRQRAHLAHHERIHTMESFLTLSSPSPSMSSQLPRPIGLIS", "length": 569, "header": "tr|A0A286ZQ02-1|A0A286ZQ02_PIG Isoform 1 of Zinc finger protein 583 OS=Sus scrofa OX=9823 GN=ZNF583 PE=3 SV=1 CANONICAL=A0A286ZQ02-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQ02-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ02/entry#A0A286ZQ02-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCP00000033558.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 211, "start_aa": "Thr", "end_pos": 211, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr211", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 213, "start_aa": "Thr", "end_pos": 213, "end_aa": "Thr", "residue": "Thr", 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sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQD5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738507", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738507", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1LRM4-1", "protein_name": "Homeobox protein DBX2", "gene_name": "Dbx2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDGSDTPSIPVVKTQSGSADCSRTLPEALLRAKDALRSPDPAGALSRSPRTRSPRLPGQRARTMLPSAVAAQAGAYWDVVASSALLGLPAPGFGSLGKSFLIENLLRAGAGPTHAPPSPRPAAGPECPQLRSLPANPVPLKLCPAGPFGARWAFQMPPGRAPGERDSAFQPSAPVPSKPFLLSAGPFYSACCGGSCRRPASPTAFSREEHGLPLLTQDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQNRRMKWRNSKEKEVLSNRCLQEVSLQEDRLAQPAAGCPPQCPSVWEVSQPHSSPSWREESPESVERLSQENSGVPEAGSLRGVLYLCPEKGPRDKDGLCSAI", "length": 377 }, "evidence": [ { "id": "A0A286ZQD5", "url": "https://omabrowser.org/oma/group/A0A286ZQD5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VQH7-1", "protein_name": "Homeobox protein DBX2", "gene_name": "Dbx2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDGPDTPSIPVLKTLSGSADRSRTLPEEPLRAKDSPLSPDPVRALSLSLRTRSPRLPGQRARTMLPSAVAAQAGAYWDVVASSALFGLPAPGFGSLGKSFLIENLLRAGAGPTHAPPPPRPAPGPECPQLRPLPASPVPLKLCPAGPFGVRWAFQMPPGRAPGERDSAFQPSAPVPSKPFLLSAPPFYSACCGGSCRRPASPTAFSREEHGLPLLTQDSNSKARRGILRRAVFSEEQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQVKIWFQNRRMKWRNSKEKEVLSSRCLQEVSLQEDRLARPAVGCPPQCPSIWEVSQPHSSPSWREETPESAERLTQENSGVLEADSLRGTLYLCPEKGPRDKHGLQSTI", "length": 377 }, "evidence": [ { "id": "A0A286ZQD5", "url": "https://omabrowser.org/oma/group/A0A286ZQD5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q17QR5-1", "protein_name": "Homeobox protein DBX2", "gene_name": "DBX2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLPSAVAAHAGAYWDVVASSSLLNFPAAPGFGNLGKSFLIENLLRAGGAPPLGLPPPQHHGSAAALGAGAQVRSLPASPVPLKLCPAAEPVSPGGAPYGTRWAFQVLSPSADGARLPGRAPGDPDCAFQPPAPAPSKPFFLSAPPFYSACCGGSCRRPASPTAFAREESVLPLLTQESTSKVRRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEVLSNRCLQEVVLQEDPLSRSALGFPSPCASLWEVSQQHPSPGWRENSPEPSERLIQGSPGAEALPPEAKSLQGALYLCSEEDARDKNALTGTV", "length": 340 }, "evidence": [ { "id": "A0A286ZQD5", "url": "https://omabrowser.org/oma/group/A0A286ZQD5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6ZNG2-1", "protein_name": "Homeobox protein DBX2", "gene_name": "DBX2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLPSAVAAHAGAYWDVVASSALLNLPAAPGFGNLGKSFLIENLLRVGGAPTPRLQPPAPHDPATALATAGAQLRPLPASPVPLKLCPAAEQVSPAGAPYGTRWAFQVLSPSADSARLPGRAPGDRDCTFQPSAPAPSKPFLLSTPPFYSACCGGSCRRPASSTAFPREESMLPLLTQDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEVLSNRCIQEVGLQEDPLSRSALGFPSPCPSIWDVPQQHSSPRWRENSPEPSERLIQESSGAPPPEANSLQGALYLCSEEEAGSKGVLTGAV", "length": 339 }, "evidence": [ { "id": "A0A286ZQD5", "url": "https://omabrowser.org/oma/group/A0A286ZQD5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQD5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQD5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQD5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQD5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZQD5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQD5" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Homeobox", "eco_id": "ECO_0000259", "start_pos": 183, "end_pos": 243, "start_aa": "Arg", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZQE2-1", "uniprot_ac": "A0A286ZQE2", "uniprot_id": "A0A286ZQE2_PIG", "mass": { "chemical_mass": 149135.0, "monoisotopic_mass": 149135.0 }, "refseq": {}, "gene_names": [ { "name": "SBNO1", "type": "recommended", "evidence": [ { "id": "A0A286ZQE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQE2" } ] } ], "protein_names": [ { "name": "Protein strawberry notch homolog 1", "type": "recommended", "evidence": [ { "id": "A0A286ZQE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQE2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a crucial role in the regulation of neural stem cells (NSCs) proliferation. Enhances the phosphorylation of GSK3B through the PI3K-Akt signaling pathway, thereby upregulating the Wnt/beta-catenin signaling pathway and promoting the proliferation of NSCs. Improves ischemic stroke recovery while inhibiting neuroinflammation through small extracellular vesicles (sEVs)-mediated mechanism. Enhances the secretion of sEVs from NSCs, which in turn inhibit both the MAPK and NF-kappaB pathways in microglia. This inhibition suppresses the pro-inflammatory M1 polarization of microglia, promoting a shift towards the M2 anti-inflammatory phenotype, which is beneficial for reducing neuroinflammation.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQE2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQE2#function" }, { "database": "UniProtKB", "id": "ARBA00057925", "url": "https://www.uniprot.org/uniprotkb/ARBA00057925#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQE2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQE2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SBNO1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQE2", "locus": { "chromosome": "14", "start_pos": 29620090, "end_pos": 29571125, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009776", "url": "https://www.ensembl.org/id/ENSSSCG00000009776" } ] } } ], "crossref": [ { "id": "ENSSSCG00000009776", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009776", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR026741", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026741", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026937", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026937", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057332", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057332", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12706", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12706", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12706:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12706:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13871", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13871", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13872", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13872", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25373", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25373", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZQE2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQE2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLATLTPTPPVQQSVPLSALELNLETEAAVPVKQEPETVSTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITLTKFIQTTANTRPSVSAPAVRNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVATAATDVSNGTVKKESSNKEVARIWINDVKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKIKKRKGEEITREAKKARKVGGLTGSSSDDSGSGSDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIRKDHKKNKDKKKRKSIDPDSIQSALLASGLGSKRPSFSSTPVISPTPNSAPANSNINSNSSLITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGDKRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSDDALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQQRHPQSIANLSNA", 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"end_pos": 59703694, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025289.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025289.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033863.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033863.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 171, "start_aa": "Thr", "end_pos": 171, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr171", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], 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"publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQI0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q80VM4-1", "protein_name": "Zinc finger protein 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PE=4 SV=3 CANONICAL=A0A286ZQK2-1" }, "locus": { "chromosome": "10", "start_pos": 7797103, "end_pos": 7776962, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025633.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025633.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020192.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020192.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 454, "start_aa": "Thr", "end_pos": 454, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr454", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L834", "url": "https://www.uniprot.org/uniprotkb/I3L834" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4IP63-1", "protein_name": "G patch domain-containing protein 2", "gene_name": "gpatch2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MFRAAEIKSFGKAGTGWHFRRTMDELVHDLVSALEESSEQARGGFGDGGDHALAVGCLLKRQARKRRGRKRRSDNPHPPWDTCHLSEGSESSLEEQKDYRSSTAAGGANTRDNNSDSDEQLGAKRRTPLTADSGRGKRPLWLDDLSGADVLGTRSLRRRRKVKRMAVDPPLDVTAMLAPPAKAPAVGGGRETVFGPEAKVSDANKNRVKKRKFTVQRLTQDVADEGVVVESEEAGHSLKDKMDFEEQKGSDEEMSDRCETSSVSNSSDGGLYTNDEGRQGDDEQSDWFYEGEPGGACGIAGVVPWWERDSNELDLNDPVFNSILTGAFPLMSQGAQRGFQARLARQTCLEQSQGSSQGISDRLPRLSQDPHESWFSSGARRDQLLWDSRSDRSHRKSCSLKTASRQTSGHLGSLCTGDIKRRRKAAPVGAQSSSGVVGESAAPLPDSNLGNRMLQSMGWTPGTGLGPEGRGITEPIRASQRPKGAGLGFN", "length": 490 }, "evidence": [ { "id": "A0A286ZQK2", "url": "https://omabrowser.org/oma/group/A0A286ZQK2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A3Q1M3I0-1", "protein_name": "G-patch domain containing 2", "gene_name": "GPATCH2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAMDSLGNRTLRRRRKVKRMAVDLPPENPNKRTMTQPLEGCRDQDMDNDNRAYQYQEFSKNKVKKRKLKIVRQGPKIQDEGVVLESEEISQTNKDKMEYEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITGVIPWWEKEDPTDLDKNLPDPVFESILTGSFPLMSHPGRRGFQARLSRLHGMPSKNIKKSGGTPPSMVTTPGPVSNKRMVHFSPDSHHHDHWFSPGARTEHGQHQLLRDNRAERGHKKNCSVKTASRQTSMHLGSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGWTPGTGLGRDGKGIAEPIPALQRPKGLGLGFPLPKSTSATTASNSGKSA", "length": 529 }, "evidence": [ { "id": "A0A286ZQK2", "url": "https://omabrowser.org/oma/group/A0A286ZQK2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I6GC35-1", "protein_name": "G patch domain containing 2", "gene_name": "Gpatch2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"MFGADGRPAIGTAAGKSWHFSRTMEELVHDLVSALEESSEQARGGFAETGEHSRNLSCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYREKHSNNKKDRSDSDDQMLVAKRRPSSNLSSSVRGKRLLWHESDFAVDSLGNRTLRRRRKVKRMAVDLPQDVSSKRTMTQLPEGCRDQDMDNDRASQYPEFTRKKVKKRKLKGIRPGPKTQEEGGVLESEERSQPNKDRMEYEEQKASDELRSESDTSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGIAGVVPWWEKDEPAELDTNLPDPVFESILSGSFPLMSHPGRGGFQARLSRLHGTPSKNIKKSSGAPPSMLSAPGPGSNKRMVHFSPDAHRHDHWFSPGARTEHGQHQLLRDNRAERGHKKSCSLKTASRQTSMHLGSLCTGDIKRRRKAAPLPGPTAAGIVGENAQPILESNIGNRMLQSMGWTPGSGLGRDGRGIAEPVQAVQRPKGLGLGFPLPKSSPTSPAPTSGNPA", "length": 527 }, "evidence": [ { "id": "A0A286ZQK2", "url": "https://omabrowser.org/oma/group/A0A286ZQK2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NW75-1", "protein_name": "G patch domain-containing protein 2", "gene_name": "GPATCH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITGVVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSGGTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCSVRTASRQTSMHLGSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA", "length": 528 }, "evidence": [ { "id": "A0A286ZQK2", "url": "https://omabrowser.org/oma/group/A0A286ZQK2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQK2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK2" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQK2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQK2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 106, "end_pos": 108, "annotation": "n_glycosylation_sequon" }, { "start_pos": 155, "end_pos": 157, "annotation": "n_glycosylation_sequon" }, { "start_pos": 419, "end_pos": 421, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZQK6-1", "uniprot_ac": "A0A286ZQK6", "uniprot_id": "A0A286ZQK6_PIG", "mass": { "chemical_mass": 19050.0, "monoisotopic_mass": 19050.0 }, "refseq": { "ac": "XP_020942403", "name": "zymogen granule protein 16 homolog B", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942403" }, "gene_names": [ { "name": "ZG16B", "type": "recommended", "evidence": [ { "id": "A0A286ZQK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6" } ] }, { "name": "ZG16B", "type": "synonym", "evidence": [ { "id": "XP_020942403", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942403" } ] } ], "protein_names": [ { "name": "Zymogen granule protein 16B", "type": "synonym", "evidence": [ { "id": "A0A286ZQK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6/entry#names_and_taxonomy" } ] }, { "name": "zymogen granule protein 16 homolog B", "type": "synonym", "evidence": [ { "id": "XP_020942403", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942403" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQK6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZG16B", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6", "locus": {} } ], "crossref": [ { "id": "A0A286ZQK6", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZQK6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000033610", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033610", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "110259942", "url": "https://www.ncbi.nlm.nih.gov/gene/110259942", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001229", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001229", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036404", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036404", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052321", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052321", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110259942", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259942", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "STTCWAG", "url": "https://omabrowser.org/oma/group/STTCWAG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZQK6", "url": "https://www.orthodb.org/?gene=A0A286ZQK6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33589", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33589", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33589:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33589:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01419", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01419", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020942403", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942403", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZQK6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLWLTLTLLWSSPCWAGQTYGIGGGSYFSTSKDNESEITGIRVYIGLVGLIKSIQVRYGSSWSEKYGSPGGNAQEFILQPGEHIIAVYGTYRLYLRYLVLYTDFDRWATFGEKTGQEFFAYPDASEKVLTGLFGHHKLLGITDIGFQWDYPLIDVTSAQPDTTYIQNK", "length": 169, "header": "tr|A0A286ZQK6-1|A0A286ZQK6_PIG Isoform 1 of Zymogen granule protein 16B OS=Sus scrofa OX=9823 GN=ZG16B PE=4 SV=2 CANONICAL=A0A286ZQK6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6/entry#A0A286ZQK6-1", "sequence": { "sequence": "MLLWLTLTLLWSSPCWAGQTYGIGGGSYFSTSKDNESEITGIRVYIGLVGLIKSIQVRYGSSWSEKYGSPGGNAQEFILQPGEHIIAVYGTYRLYLRYLVLYTDFDRWATFGEKTGQEFFAYPDASEKVLTGLFGHHKLLGITDIGFQWDYPLIDVTSAQPDTTYIQNK", "length": 169, "header": "tr|A0A286ZQK6-1|A0A286ZQK6_PIG Isoform 1 of Zymogen granule protein 16B OS=Sus scrofa OX=9823 GN=ZG16B PE=4 SV=2 CANONICAL=A0A286ZQK6-1" }, "locus": { "chromosome": "3", "start_pos": 39336729, "end_pos": 39334339, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063421.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063421.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054233.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054233.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQK6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110259942", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259942", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q96DA0-1", "protein_name": "Pancreatic adenocarcinoma up-regulated factor", "gene_name": "ZG16B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLLLLTLALLGGPTWAGKMYGPGGGKYFSTTEDYDHEITGLRVSVGLLLVKSVQVKLGDSWDVKLGALGGNTQEVTLQPGEYITKVFVAFQAFLRGMVMYTSKDRYFYFGKLDGQISSAYPSQEGQVLVGIYGQYQLLGIKSIGFEWNYPLEEPTTEPPVNLTYSANSPVGR", "length": 172 }, "evidence": [ { "id": "A0A286ZQK6", "url": "https://omabrowser.org/oma/group/A0A286ZQK6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQK6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQK6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 35, "end_pos": 37, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZQK6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 169, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZQK6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZQK6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZQK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK6" }, { "id": "PS51752", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51752" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Jacalin-type lectin", "eco_id": "ECO_0000259", "start_pos": 15, "end_pos": 151, "start_aa": "Cys", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 35, "end_pos": 37 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZQP0-1", "uniprot_ac": "A0A286ZQP0", "uniprot_id": "A0A286ZQP0_PIG", "mass": { "chemical_mass": 96139.0, "monoisotopic_mass": 96139.0 }, "refseq": {}, "gene_names": [ { "name": "VWA7", "type": "recommended", "evidence": [ { "id": "A0A286ZQP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0" } ] } ], "protein_names": [ { "name": "von Willebrand factor A domain containing 7", "type": "synonym", "evidence": [ { "id": "A0A286ZQP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "VWA7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0", "locus": { "chromosome": "7", "start_pos": 23874899, "end_pos": 23885994, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036796", "url": "https://www.ensembl.org/id/ENSSSCG00000036796" } ] } } ], "crossref": [ { "id": "ENSSSCG00000036796", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036796", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR036465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052577", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052577", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056475", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056475", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056861", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056861", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056862", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056862", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057613", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057613", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057615", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057615", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR14905", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14905", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14905:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14905:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23560", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23560", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23610", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23610", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23619", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23619", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25106", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25106", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZQP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPU4", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPU4-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPU4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQW0", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQW0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQW0-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQW0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5US60", "url": "https://www.uniprot.org/uniprotkb/A0ABB5US60", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5US60-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5US60-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLPADAPLSHLGPPALLLLQLLLPPTTAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFLGRTLLADDLFAAYFGPGFPSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRTRLVGALRETVVAAALDHTLARQRLGAALHALQDFYSHSNWVELGMQQPHPHLLWPRQELRSLAQVDDPTCSDCEELSCPGNLLGVTLLTSGYFGTHPSKPPGKCSHGGHFDQSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRNRLGDRGFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHIVEQRRGSPMEPSHYVLVPFHDPGFGPVFITSDPDSFWQQLNEIHALGGGDEPEMCLSALELALLHTPPLSDIFVFTDASPKDAYLTNRVESLTRERRCRVTFLVTEDPSRVRGRARREVLSPLRFEPYEAVALASGGEVIFTKDQYIQDVAAIVGDSIADLVTLPLEPPIVVPERPLVFNVDGLLQRVTVRIHGEVSSFWIRNPAGVSQGQDEGEGPLGHTRHFGQFWIVTMNDPLQTGTWEIQVTANGTPRVRVQAQTSLDFLFHFGIPVEDGPHPGLYPLTQPVTGLQTQLLVEVTGLGSRGNPGDPLPRFSHVVLRGVLQGEELGRVPLEPMGPQERGLLTASLPPTLLATSGPFSLELIGQDGAGQGLHRAAPQPCAVVPVFLELSGPPGFLAPGTKAPLTLRIASFSGPQDLDLRTSVNPSFALSSNISRVHLEPNESAWGHLWLEVPDSATPDSMVMVTVTATTDGEASTAPPTHAFLRLLVLAPAPQDQLPAPVHSTGLVLTTAGPVFHPSVLETLSRAGGGLVGTPWWGTVAGVLLLLGLAFW", "length": 891, "header": "tr|A0A286ZQP0-1|A0A286ZQP0_PIG Isoform 1 of von Willebrand factor A domain containing 7 OS=Sus scrofa OX=9823 GN=VWA7 PE=1 SV=3 CANONICAL=A0A286ZQP0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0/entry#A0A286ZQP0-1", "sequence": { "sequence": "MLPADAPLSHLGPPALLLLQLLLPPTTAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFLGRTLLADDLFAAYFGPGFPSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRTRLVGALRETVVAAALDHTLARQRLGAALHALQDFYSHSNWVELGMQQPHPHLLWPRQELRSLAQVDDPTCSDCEELSCPGNLLGVTLLTSGYFGTHPSKPPGKCSHGGHFDQSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRNRLGDRGFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHIVEQRRGSPMEPSHYVLVPFHDPGFGPVFITSDPDSFWQQLNEIHALGGGDEPEMCLSALELALLHTPPLSDIFVFTDASPKDAYLTNRVESLTRERRCRVTFLVTEDPSRVRGRARREVLSPLRFEPYEAVALASGGEVIFTKDQYIQDVAAIVGDSIADLVTLPLEPPIVVPERPLVFNVDGLLQRVTVRIHGEVSSFWIRNPAGVSQGQDEGEGPLGHTRHFGQFWIVTMNDPLQTGTWEIQVTANGTPRVRVQAQTSLDFLFHFGIPVEDGPHPGLYPLTQPVTGLQTQLLVEVTGLGSRGNPGDPLPRFSHVVLRGVLQGEELGRVPLEPMGPQERGLLTASLPPTLLATSGPFSLELIGQDGAGQGLHRAAPQPCAVVPVFLELSGPPGFLAPGTKAPLTLRIASFSGPQDLDLRTSVNPSFALSSNISRVHLEPNESAWGHLWLEVPDSATPDSMVMVTVTATTDGEASTAPPTHAFLRLLVLAPAPQDQLPAPVHSTGLVLTTAGPVFHPSVLETLSRAGGGLVGTPWWGTVAGVLLLLGLAFW", "length": 891, "header": "tr|A0A286ZQP0-1|A0A286ZQP0_PIG Isoform 1 of von Willebrand factor A domain containing 7 OS=Sus scrofa OX=9823 GN=VWA7 PE=1 SV=3 CANONICAL=A0A286ZQP0-1" }, "locus": { "chromosome": "7", "start_pos": 23885422, "end_pos": 23875374, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107856.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107856.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082240.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082240.1" } ] } }, { "isoform_ac": "A0ABB5UPU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0/entry#A0ABB5UPU4-1", "sequence": { "sequence": "MLPADAPLSHLGPPALLLLQLLLPPTTAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFLGRTLLADDLFAAYFGPGFPSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRTRLVGALRETVVAAALDHTLARQRLGAALHALQDFYSHSNWVELGMQQPHPHLLWPRQELRSLAQVDDPTCSDCEELSCPGNLLGVTLLTSGYFGTHPSKPPGCKTGPSGLHPGLQPPTKPPGRQGFLQAAGHHPSLQPELRPGYHRQYG", "length": 288, "header": "tr|A0ABB5UPU4-1|A0ABB5UPU4_PIG Computationally mapped isoform of von Willebrand factor A domain containing 7 OS=Sus scrofa OX=9823 GN=VWA7 PE=1 SV=1 CANONICAL=A0A286ZQP0-1" }, "locus": { "chromosome": "7", "start_pos": 23885422, "end_pos": 23881997, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107858.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107858.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082242.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082242.1" } ] } }, { "isoform_ac": "A0ABB5UQW0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0/entry#A0ABB5UQW0-1", "sequence": { "sequence": "MLPADAPLSHLGPPALLLLQLLLPPTTAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRPPLRLEDFLGRTLLADDLFAAYFGPGFPSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRTRLVGALRETVVAAALDHTLARQRLGAALHALQDFYSHSNWVELGMQQPHPHLLWPRQELRSLAQVDDPTCSDCEELSCPGNLLGVTLLTSGYFGTHPSKPPGKCSHGGHFDQSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRNRLGDRGFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHIVEQRRGSPMEPSHYVLVPFHDPGNCVLAGIVQGSPGQG", "length": 378, "header": "tr|A0ABB5UQW0-1|A0ABB5UQW0_PIG Computationally mapped isoform of von Willebrand factor A domain containing 7 OS=Sus scrofa OX=9823 GN=VWA7 PE=1 SV=1 CANONICAL=A0A286ZQP0-1" }, "locus": { "chromosome": "7", "start_pos": 23885422, "end_pos": 23881843, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107861.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107861.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000082244.1", "url": "https://www.ensembl.org/id/ENSSSCP00000082244.1" } ] } }, { "isoform_ac": "A0ABB5US60-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQP0/entry#A0ABB5US60-1", "sequence": { "sequence": "MQQPHPHLLWPRQELRSLAQVDDPTCSDCEELSCPGNLLGVTLLTSGYFGTHPSKPPGKCSHGGHFDQSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRNRLGDRGFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHIVEQRRGSPMEPSHYVLVPFHDPGFGPVFITSDPDSFWQQLNEIHALGGGDEPEMCLSALELALLHTPPLSDIFVFTDASPKDAYLTNRVESLTRERRCRVTFLVTEDPSRVRGRARREVLSPLRFEPYEAVALASGGEVIFTKDQYIQDVAAIVGDSIADLVTLPLEPPIVVPERPLVFNVDGLLQRVTVRIHGEVSSFWIRNPAGVSQGQDEGEGPLGHTRHFGQFWIVTMNDPLQTGTWEIQVTANGTPRVRVQAQTSLDFLFHFGIPVEDGPHPGLYPLTQPVTGLQTQLLVEVTGLGSRGNPGDPLPRFSHVVLRGVLQGEELGRVPLEPMGPQERGLLTASLPPTLLATSGPFSLELIGQDGAGQGLHRAAPQPCAVVPVFLELSGPPGFLAPGTKAPLTLRIASFSGPQDLDLRTSVNPSFALSSNISRVHLEPNESAWGHLWLEVPDSATPDSMVMVTVTATTDGEASTAPPTHAFLRLLVLAPAPQDQLPAPVHSTGLVLTTAGPVFHPSVLETLSRAGGGLVGTPWWGTVAGVLLLLGLAFW", "length": 708, "header": "tr|A0ABB5US60-1|A0ABB5US60_PIG Computationally mapped isoform of von Willebrand factor A domain containing 7 OS=Sus scrofa OX=9823 GN=VWA7 PE=1 SV=1 CANONICAL=A0A286ZQP0-1" }, "locus": { "chromosome": "7", "start_pos": 23884127, "end_pos": 23875374, "strand": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030104", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030104", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047067", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047067", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110261238", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261238", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CYDPRDN", "url": "https://omabrowser.org/oma/group/CYDPRDN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B596", "url": "https://www.orthodb.org/?gene=A0A287B596", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412:SF35", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412:SF35", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24681", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24681", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020952386", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952386", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZQU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A364", "url": "https://www.uniprot.org/uniprotkb/A0A287A364", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A364-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A364-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AUQ5", "url": "https://www.uniprot.org/uniprotkb/A0A287AUQ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AUQ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AUQ5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B596", "url": "https://www.uniprot.org/uniprotkb/A0A287B596", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B596-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B596-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6A5", "url": "https://www.uniprot.org/uniprotkb/A0A287B6A5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6A5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6A5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMR6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMR6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASEGCAKAGDSPFSSDKHAQLILAQMNKMRNGQHFCDVQLQVGKETFNVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQVLLDFIYTGTVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKVLRSEELSIEDEYQVFLAAMQWILKDLGRRRKHVVEVLDPIRFPLLPPQRLLKYIEGVSDFNLRVALQTLLKEYCEVSKSPKENKFCNFLQTSKVRPRKKARKYLYAVGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWIGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 528, "header": "tr|A0A286ZQU9-1|A0A286ZQU9_PIG Isoform 1 of Intracisternal A particle-promoted polypeptide OS=Sus scrofa OX=9823 GN=IPP PE=4 SV=1 CANONICAL=A0A286ZQU9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9/entry#A0A286ZQU9-1", "sequence": { "sequence": "MASEGCAKAGDSPFSSDKHAQLILAQMNKMRNGQHFCDVQLQVGKETFNVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQVLLDFIYTGTVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKVLRSEELSIEDEYQVFLAAMQWILKDLGRRRKHVVEVLDPIRFPLLPPQRLLKYIEGVSDFNLRVALQTLLKEYCEVSKSPKENKFCNFLQTSKVRPRKKARKYLYAVGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWIGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 528, "header": "tr|A0A286ZQU9-1|A0A286ZQU9_PIG Isoform 1 of Intracisternal A particle-promoted polypeptide OS=Sus scrofa OX=9823 GN=IPP PE=4 SV=1 CANONICAL=A0A286ZQU9-1" }, "locus": { "chromosome": "6", "start_pos": 165700073, "end_pos": 165674684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040668.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040668.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033952.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033952.1" } ] } }, { "isoform_ac": "A0A287A364-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9/entry#A0A287A364-1", "sequence": { "sequence": "MASEGCAKAGDSPFSSDKHAQLILAQMNKMRNGQHFCDVQLQVGKETFNVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQVLLDFIYTGTVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKVLRSEELSIEDEYQVFLAAMQWILKDLGRRRKHVVEVLDPIRFPLLPPQRLLKYIEGVSDFNLRVALQTLLKEYCEVSKSPKENKFCNFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFTQYWTTVSSLHQARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWIGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGFPARRICSAEFGKVE", "length": 566, "header": "tr|A0A287A364-1|A0A287A364_PIG Computationally mapped isoform of Actin-binding protein IPP OS=Sus scrofa OX=9823 GN=IPP PE=4 SV=1 CANONICAL=A0A286ZQU9-1" }, "locus": { "chromosome": "6", "start_pos": 165709153, "end_pos": 165674684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057175.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057175.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038393.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038393.1" } ] } }, { "isoform_ac": "A0A287AUQ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9/entry#A0A287AUQ5-1", "sequence": { "sequence": "MASEGCAKAGDSPFSSDKHAQLILAQMNKMRNGQHFCDVQLQVGKETFNVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQVLLDFIYTGTVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKVLRSEELSIEDEYQVFLAAMQWILKDLGRRRKHVVEVLDPIRFPLLPPQRLLKYIEGVSDFNLRVALQTLLKEYCEVSKSPKENKFCNFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFTQYWTTVSSLHQARCGLGVAVLGGMVYAIGGGWIGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 538, "header": "tr|A0A287AUQ5-1|A0A287AUQ5_PIG Computationally mapped isoform of Intracisternal A particle-promoted polypeptide OS=Sus scrofa OX=9823 GN=IPP PE=4 SV=1 CANONICAL=A0A286ZQU9-1" }, "locus": { "chromosome": "6", "start_pos": 165700073, "end_pos": 165674684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061739.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061739.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047664.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047664.1" } ] } }, { "isoform_ac": "A0A287B596-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9/entry#A0A287B596-1", "sequence": { "sequence": "MASEGCAKAGDSPFSSDKHAQLILAQMNKMRNGQHFCDVQLQVGKETFNVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQVLLDFIYTGTVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKVLRSEELSIEDEYQVFLAAMQWILKDLGRRRKHVVEVLDPIRFPLLPPQRLLKYIEGVSDFNLRVALQTLLKEYCEVSKSPKENKFCNFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFTQYWTTVSSLHQARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWIGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 584, "header": "tr|A0A287B596-1|A0A287B596_PIG Computationally mapped isoform of Actin-binding protein IPP OS=Sus scrofa OX=9823 GN=IPP PE=4 SV=1 CANONICAL=A0A286ZQU9-1" }, "locus": { "chromosome": "6", "start_pos": 165700073, "end_pos": 165674684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055357.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055357.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051657.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051657.1" } ] } }, { "isoform_ac": "A0A287B6A5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9/entry#A0A287B6A5-1", "sequence": { "sequence": "MASEGCAKAGDSPFSSDKHAQLILAQMNKMRNGQHFCDVQLQVGKETFNVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQVLLDFIYTGTVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKVLRSEELSIEDEYQVFLAAMQWILKDLGRRRKHVVEVLDPIRFPLLPPQRLLKYIEGGYTRLQGGRWSDSRALSCVERFDTFTQYWTTVSSLHQARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWIGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 532, "header": "tr|A0A287B6A5-1|A0A287B6A5_PIG Computationally mapped isoform of Intracisternal A particle-promoted polypeptide OS=Sus scrofa OX=9823 GN=IPP PE=4 SV=1 CANONICAL=A0A286ZQU9-1" }, "locus": { "chromosome": "6", "start_pos": 165700073, "end_pos": 165674684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059216.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059216.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051836.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051836.1" } ] } }, { "isoform_ac": "A0A5G2QMR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9/entry#A0A5G2QMR6-1", "sequence": { "sequence": "MASEGCAKAGDSPFSSDKHAQLILAQMNKMRNGQHFCDVQLQVGKETFNVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQVLLDFIYTGTVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKVLRSEELSIEDEYQVFLAAMQWILKDLGRRRKHVVEVLDPIRFPLLPPQRLLKYIEGVSDFNLRVALQTLLKEYCEVSKSPKENKFCNFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFTQYWTTVSSLHQARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWIGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEGRAHGISGSQTRCRIRAVVTDLHHSDNTRSKLRLQPTPQLTAMPDP", "length": 556, "header": "tr|A0A5G2QMR6-1|A0A286ZQU9_PIG Computationally mapped isoform of Intracisternal A particle-promoted polypeptide OS=Sus scrofa OX=9823 GN=IPP PE=4 SV=1 CANONICAL=A0A286ZQU9-1" }, "locus": { "chromosome": "6", "start_pos": 165694574, "end_pos": 165674684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084842.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084842.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065338.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065338.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMR6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMR6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110261238", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110261238", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JYR6-1", "protein_name": "Actin-binding protein IPP", "gene_name": "Ipp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKEEYAKAADSSFSSDKHAQLILAQMNKMRTGQHFCDVQLQVGKETFQVHRLVLAASSPYFAALFTGGMKESSKDVVQILGVEAGIFQLLLDFIYTGLVNIAVSNVQELIVAADMLQLTEVVNLCCDFLKGQIDPQNCIGLFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIRILRSEELSIEDEYQVFLAAMQWILKDLGKRRKHVVEVLDPVRFPLLPSQRLLKYIEGVSDFNLRVALQTLLKEYCEVCKSPKENKFCSFLQTSKARPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFSQYWTTVSSLHQARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWVGAEIGDTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYAVGGISNEGLELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYAIGGWNETQDALHTVEKYSFEEEKWIEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 584 }, "evidence": [ { "id": "A0A286ZQU9", "url": "https://omabrowser.org/oma/group/A0A286ZQU9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8C2QKS9-1", "protein_name": "Actin-binding protein IPP", "gene_name": "Ipp", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSKEECAKAGDSSFSSDKHAELILAQINRMRNGQHFCDVQLQVGKETFQVHRLVLAASSPYFAALFAGGMKESSKDVVQILGIEAGIFQLLLDFIYTGLVNIAVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPQNCIGLFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKILRSEELSIEDEYQVFLAAMQWILKDLGKRRKHVVEVLDPIRFPLLPSQRLLKYIEGVSDFNLRVALQTLLKEYCEVSKSPKENKFCSFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFSQYWTTVSSLHQARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWVGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGLELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSIGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 584 }, "evidence": [ { "id": "A0A286ZQU9", "url": "https://omabrowser.org/oma/group/A0A286ZQU9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BIL6-1", "protein_name": "Actin-binding protein IPP", "gene_name": "IPP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MANEGCAKAGDSHFSLDKHAQLILAQINKMRNGEHFCDVELQVGKETFKVHRLVLAASSPYFAALFTGGMKESSKDVVQILGIEAGIFQILLDFIYTGIVNIGVNNVQELIVAADMLQLTEVVNLCCEFLKGQIDPLNCIGIFQFSEQIACHDLLEFTENYIHVHFLEVHSGEEFLALTKDQLIKILRSEELSIEDEYQVFLAAMQWILKDLGKRRKHVVEVLDPIRFPLLPPQRLVKYIEGISDFNLRVALQTLLKEYCEVCKSPKENKFCSFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFSQYWTTVSSLHQARCGLGVAVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWVGAEIGNTVERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVVGGISNEGIELCSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYAIGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGLCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 584 }, "evidence": [ { "id": "A0A286ZQU9", "url": "https://omabrowser.org/oma/group/A0A286ZQU9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P28575-1", "protein_name": "Actin-binding protein IPP", "gene_name": "Ipp", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSKEECPKAADNSFSSDKHAQLILAQMNKMRSGQHFCDVQLQVGKETFQVHRLVLAASSPYFAALFTGGMKESSKDVVQILGVEAGIFQLLLDFIYTGVVNIAVTNVQELIVAADMLQLTEVVNLCCDFLKGQIDPQNCIGLFQFSEQIACHDLLEFTENYIHVHFLEVHTGEEFLGLTKDQLIKILRSEELSIEDEYQVFLAAMQWILKDLGKRRKHVVEVLDPVRFPLLPSQRLLKYIEGVSDFNLRVALQTLLKEYCEVCKSPKENKFCSFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFSQYWTTVSSLHQARCGLGVAVVGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWVGAEIGNTIERFDPDENKWEVVGSMAVSRYYFGCCEMQGLIYAVGGISNEGLELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYAIGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCAVTVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 584 }, "evidence": [ { "id": "A0A286ZQU9", "url": "https://omabrowser.org/oma/group/A0A286ZQU9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VK21-1", "protein_name": "Kelch-like protein diablo", "gene_name": "Ipp", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPPLKTYQIHEYNGNTSPNANANQNANQNPTGGGGDGDFFGQNLGSGATAASHRTNLPSYCNAQYPFKVLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEAMFRPELGLNEVKQKSVVLHTIDGDILHILLDFIYTGRCEITQSNVQELLAAADMLQLNEVVDGCCEFLCRELHASNALGILRFAEAHNCESLAKSALNFVHANFPAVTLEDEFLETPQTLLSQLLNSELLRVDSESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDKALKDDCRDMSVKIALRSICRDIASKRGQLVPLRVCPRQLAKKNIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRILPGVSALNGKIYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGGWIGDDIGGSMECYDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLISFNPVTKEWNELARMQTARCQMGVAVLDRYLYVVGGSSISQDILSSVERYSFDEDKWTTVCALNVPRAIPAVVAADGLLYVAGGDQPCEVNFYRAQVTINAVECYDPLSDTWKNCPDLPVSRSEAGAVVV", "length": 627 }, "evidence": [ { "id": "A0A286ZQU9", "url": "https://omabrowser.org/oma/group/A0A286ZQU9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y573-1", "protein_name": "Actin-binding protein IPP", "gene_name": "IPP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MANEDCPKAADSPFSSDKHAQLILAQINKMRNGQHFCDVQLQVGQESFKAHRLVLAASSPYFAALFTGGMKESSKDVVPILGIEAGIFQILLDFIYTGIVNIGVNNVQELIIAADMLQLTEVVHLCCEFLKGQIDPLNCIGIFQFSEQIACHDLLEFSENYIHVHFLEVHSGEEFLALTKDQLIKILRSEELSIEDEYQVFLAAMQWILKDLGKRRKHVVEVLDPIRFPLLPPQRLLKYIEGVSDFNLRVALQTLLKEYCEVCKSPKENKFCSFLQTSKVRPRKKARKYLYAVGGYTRLQGGRWSDSRALSCVERFDTFSQYWTTVSSLHQARSGLGVTVLGGMVYAIGGEKDSMIFDCTECYDPVTKQWTTVASMNHPRCGLGVCVCYGAIYALGGWVGAEIGNTIERFDPDENKWEVVGNMAVSRYYFGCCEMQGLIYVIGGISNEGIELRSFEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYSVGGWNETQDALHTVEKYSFEEEKWVEVASMKVPRAGMCVVAVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL", "length": 584 }, "evidence": [ { "id": "A0A286ZQU9", "url": "https://omabrowser.org/oma/group/A0A286ZQU9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9" } ], "pmid": "" }, { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 438, "end_pos": 440, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZQU9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 528, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZQU9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZQU9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZQU9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQU9" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 37, "end_pos": 104, "start_aa": "Cys", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 438, "end_pos": 440 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZQW4-1", "uniprot_ac": "A0A286ZQW4", "uniprot_id": "A0A286ZQW4_PIG", "mass": { "chemical_mass": 193445.0, "monoisotopic_mass": 193445.0 }, "refseq": {}, "gene_names": [ { "name": "NUP210L", "type": "recommended", "evidence": [ { "id": "A0A286ZQW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4" } ] } ], "protein_names": [ { "name": "Nucleoporin 210 like", "type": "synonym", "evidence": [ { "id": "A0A286ZQW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQW4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NUP210L", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4", "locus": { "chromosome": "4", "start_pos": 95698197, "end_pos": 95574108, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000038125", "url": "https://www.ensembl.org/id/ENSSSCG00000038125" } ] } } ], "crossref": [ { "id": "ENSSSCG00000038125", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000038125", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR003343", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003343", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008964", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008964", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045197", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045197", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055094", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055094", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055099", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055099", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056897", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056897", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056899", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056899", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057586", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057586", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058779", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058779", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23019", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23019", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23019:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23019:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02368", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02368", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22959", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22959", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22963", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22963", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22967", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22967", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22969", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22969", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24902", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24902", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24991", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24991", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25354", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25354", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26181", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26181", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26182", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26182", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26183", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26183", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26184", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26184", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZQW4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQW4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R363", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R363", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R363-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R363-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLELRAQLGLSGNRGLAVAMTGSPAPRGSALLCLPLQRYLLLFLFLHGTLANKLNVPQVLLPFSREPGRVPFLLEAQRGCYTWHSTHRDAVTVEPLYENGTSCSQKAVLIAESTQPTRLSSIILAREIVTDHELRCDVKVDIIDSIEIISRTRELYVDDSPLELMVRALDAKGNTFSSLAGMMFEWSIAQDNESAREELSSKIRILKYSEAEYSPPAYIVEMEKEGKQGDMILVSGIRTGAAVVKVRIYEPFYKKVAAALIRLLVLENIFLIPSHDIYLLVGAYIKYRVAKMVQGRMTEVEFPLEHYTLELQDHSVAYNVSRSGRVALLDERTAMVTAVQLGHTNLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGFTVQPGDRWSLEVGQVYVITVEVFDKSSAKVYVSDNLRIMYQFLREYFEEQLTTVNGSYHIVKALKNGVVVINASLTSIIYQNKNIQPIKFPIIHQQEVKIYFPIKLTPNFLAFPHHRMGMLYRYKVQVEGGSGNFTWTSSNETVTMVTTKGVVTAGQVRGNSTVLARDVQNPFRYGEIKIQRPGPTHCSSTHIAAKSLGHTLVTVSVTEYEEYLESSATFAAYEPLKALNPVEVALVTWQSVKEMVFEGGPRPWILEPSRFFLELSVEKTEKIRITQVRLPAKRKQNQYIYRVLCLDLGEQILTFRIGNHPGVLNPSPAVEVVQVHFICAHPASMSVTPVYKVPAGAQPCPLPQHNKQLIPVSSLRDTVLELAVFDQHRRKFDNFSSLMLEWKSSNETLAHFENYNSVEMVAKDDGSGQTRLHGHQILKVHQIKGTVLIGVNFVGYSEKKSPKELSNLPRSAAVELLLVDDVTVLPKNATIYNHPDVKEIFSLVEGSGYFLVNSSEQDIVTITYLEAESSVQLVPVHPGFLALEVYDLCLAFLGPAMAHLRVSDIQELELDLIDKVEIGKTVLVTMRVLGSSKLPFRNKYFRNMELKLQLASAIVTLTLMEEQDEYSENYILRAITVGQTTLVAIAKDKMGRKFTSAPRQIEVFPPFRLVPEKMTLIPANMMQVMSEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKVVGKAVVHGTIQTVNEDTGKVIVFSQDEVQIEVVQLRAVRILAAATRLITATEMPVYVMGVTSTQTPFSFSNANPGLTFHWTMSKRDVLDLLPRHSEVFEKLQLFYPECQPEQILMPMNSQLKLHTNREGAAFVSSRVLKCFPNSSVIEEDGEGLLKAGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRISSQPKLYAAQGRTLSAFPLGMSLTFFVQFYNSIGEKFHTHNTQLYLALNRDDLLLIGPGNKNYTYMAQAVNRGVTLIGLWDQRHPGMADYIPVSVEHAIEPDTTLTFVGDVICFSTHLLSQNGEPGTWMISADNILQTDIVTGVGVARSPGTATIFHDIPGLVKTYRETCTPSQALAITTILLPETLMLCHVQFSNTLLDIPASKVFHVHSGFSTEKGAYVCLIKVRPQSEELLQALSMADTSVYGWATLVSERSKNGMQRILIPFTPAFYINQSELVLSHKKDIGEIRVLGVDRVLEKLEVFPSSPVLVVSGHRQASVTPGLVIYPIRVVNFTSLQQMASPVFINVSCALTSQNEAVRVRAKKVKSGADQCKDSGVLQKFMGSYQILFTLFAVLASTAFLFLAYNALLKKIQTVPVVYVPTLGTSQSGSYTYTRSPPPFVSPQPPPSQRLQHWLWSIRH", "length": 1738, "header": "tr|A0A286ZQW4-1|A0A286ZQW4_PIG Isoform 1 of Nucleoporin 210 like OS=Sus scrofa OX=9823 GN=NUP210L PE=3 SV=3 CANONICAL=A0A286ZQW4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQW4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4/entry#A0A286ZQW4-1", "sequence": { "sequence": "MLELRAQLGLSGNRGLAVAMTGSPAPRGSALLCLPLQRYLLLFLFLHGTLANKLNVPQVLLPFSREPGRVPFLLEAQRGCYTWHSTHRDAVTVEPLYENGTSCSQKAVLIAESTQPTRLSSIILAREIVTDHELRCDVKVDIIDSIEIISRTRELYVDDSPLELMVRALDAKGNTFSSLAGMMFEWSIAQDNESAREELSSKIRILKYSEAEYSPPAYIVEMEKEGKQGDMILVSGIRTGAAVVKVRIYEPFYKKVAAALIRLLVLENIFLIPSHDIYLLVGAYIKYRVAKMVQGRMTEVEFPLEHYTLELQDHSVAYNVSRSGRVALLDERTAMVTAVQLGHTNLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGFTVQPGDRWSLEVGQVYVITVEVFDKSSAKVYVSDNLRIMYQFLREYFEEQLTTVNGSYHIVKALKNGVVVINASLTSIIYQNKNIQPIKFPIIHQQEVKIYFPIKLTPNFLAFPHHRMGMLYRYKVQVEGGSGNFTWTSSNETVTMVTTKGVVTAGQVRGNSTVLARDVQNPFRYGEIKIQRPGPTHCSSTHIAAKSLGHTLVTVSVTEYEEYLESSATFAAYEPLKALNPVEVALVTWQSVKEMVFEGGPRPWILEPSRFFLELSVEKTEKIRITQVRLPAKRKQNQYIYRVLCLDLGEQILTFRIGNHPGVLNPSPAVEVVQVHFICAHPASMSVTPVYKVPAGAQPCPLPQHNKQLIPVSSLRDTVLELAVFDQHRRKFDNFSSLMLEWKSSNETLAHFENYNSVEMVAKDDGSGQTRLHGHQILKVHQIKGTVLIGVNFVGYSEKKSPKELSNLPRSAAVELLLVDDVTVLPKNATIYNHPDVKEIFSLVEGSGYFLVNSSEQDIVTITYLEAESSVQLVPVHPGFLALEVYDLCLAFLGPAMAHLRVSDIQELELDLIDKVEIGKTVLVTMRVLGSSKLPFRNKYFRNMELKLQLASAIVTLTLMEEQDEYSENYILRAITVGQTTLVAIAKDKMGRKFTSAPRQIEVFPPFRLVPEKMTLIPANMMQVMSEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKVVGKAVVHGTIQTVNEDTGKVIVFSQDEVQIEVVQLRAVRILAAATRLITATEMPVYVMGVTSTQTPFSFSNANPGLTFHWTMSKRDVLDLLPRHSEVFEKLQLFYPECQPEQILMPMNSQLKLHTNREGAAFVSSRVLKCFPNSSVIEEDGEGLLKAGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRISSQPKLYAAQGRTLSAFPLGMSLTFFVQFYNSIGEKFHTHNTQLYLALNRDDLLLIGPGNKNYTYMAQAVNRGVTLIGLWDQRHPGMADYIPVSVEHAIEPDTTLTFVGDVICFSTHLLSQNGEPGTWMISADNILQTDIVTGVGVARSPGTATIFHDIPGLVKTYRETCTPSQALAITTILLPETLMLCHVQFSNTLLDIPASKVFHVHSGFSTEKGAYVCLIKVRPQSEELLQALSMADTSVYGWATLVSERSKNGMQRILIPFTPAFYINQSELVLSHKKDIGEIRVLGVDRVLEKLEVFPSSPVLVVSGHRQASVTPGLVIYPIRVVNFTSLQQMASPVFINVSCALTSQNEAVRVRAKKVKSGADQCKDSGVLQKFMGSYQILFTLFAVLASTAFLFLAYNALLKKIQTVPVVYVPTLGTSQSGSYTYTRSPPPFVSPQPPPSQRLQHWLWSIRH", "length": 1738, "header": "tr|A0A286ZQW4-1|A0A286ZQW4_PIG Isoform 1 of Nucleoporin 210 like OS=Sus scrofa OX=9823 GN=NUP210L PE=3 SV=3 CANONICAL=A0A286ZQW4-1" }, "locus": { "chromosome": "4", "start_pos": 95697193, "end_pos": 95574261, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052241.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052241.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033858.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033858.3" } ] } }, { "isoform_ac": "A0A5G2R363-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4/entry#A0A5G2R363-1", "sequence": { "sequence": "MLELRAQLGLSGNRGLAVAMTGSPAPRGSALLCLPLQRYLLLFLFLHGTLANKLNVPQVLLPFSREPGRVPFLLEAQRGCYTWHSTHRDAVTVEPLYENGTSCSQKAVLIAESTQPTRLSSIILAREIVTDHELRCDVKVDIIDSIEIISRTRELYVDDSPLELMVRALDAKGNTFSSLAGMMFEWSIAQDNESAREELSSKIRILKYSEAEYSPPAYIVEMEKEGKQGDMILVSGIRTGAAVVKVRIYEPFYKKVAAALIRLLVLENIFLIPSHDIYLLVGAYIKYRVAKMVQGRMTEVEFPLEHYTLELQDHSVAYNVSRSGRVALLDERTAMVTAVQLGHTNLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGFTVQPGDRWSLEVGQVYVITVEVFDKSSAKVYVSDNLRIMYQFLREYFEEQLTTVNGSYHIVKALKNGVVVINASLTSIIYQNKNIQPIKFPIIHQQEVKIYFPIKLTPNFLAFPHHRMGMLYRYKVQVEGGSGNFTWTSSNETVTMVTTKGVVTAGQVRGNSTVLARDVQNPFRYGEIKIQRPGPTHCSSTHIAAKSLGHTLVTVSVTEYEEYLESSATFAAYEPLKALNPVEVALVTWQSVKEMVFEGGPRPWILEPSRFFLELSVEKTEKIRITQVRLPAKRKQNQYIYRVLCLDLGEQILTFRIGNHPGVLNPSPAVEVVQVHFICAHPASMSVTPVYKVPAGAQPCPLPQHNKQLIPVSSLRDTVLELAVFDQHRRKFDNFSSLMLEWKSSNETLAHFENYNSVEMVAKDDGSGQTRLHGHQILKVHQIKGTVLIGVNFVGYSEKKSPKELSNLPRSAAVELLLVDDVTVLPKNATIYNHPDVKEIFSLVEGSGYFLVNSSEQDIVTITYLEAESSVQLVPVHPGFLALEVYDLCLAFLGPAMAHLRVSDIQELELDLIDKVEIGKTVLVTMRVLGSSKLPFRNKYFRNMELKLQLASAIVTLTLMEEQDEYSENYILRAITVGQTTLVAIAKDKMGRKFTSAPRQIEVFPPFRLVPEKMTLIPANMMQVMSEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKVVGKAVVHGTIQTVNEDTGKVIVFSQDEVQIEVVQLRAVRILAAATRLITATEMPVYVMGVTSTQTPFSFSNANPGLTFHWTMSKRDVLDLLPRHSEVFEKLQLFYPECQPEQILMPMNSQLKLHTNREGAAFVSSRVLKCFPNSSVIEEDGEGLLKAGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRISSQPKLYAAQGRTLSAFPLGMSLTFFVQFYNSIGEKFHTHNTQLYLALNRDDLLLIGPGNKNYTYMAQAVNRGVTLIGLWDQRHPGMADYIPVSVEHAIEPDTTLTFVGDVICFSTHLLSQNGEPGTWMISADNILQTDIVTGVGVARSPGTATIFHDIPGLVKTYRETCTPSQALAITTILLPETLMLCHVQFSNTLLDIPASKVFHVHSGFSTEKDQCKDSGVLQKFMGSYQILFTLFAVLASTAFLFLAYNALLKKIQTVPVVYVPTLGTSQSGSYTYTRSPPPFVSPQPPPSQRLQHWLWSIRH", "length": 1586, "header": "tr|A0A5G2R363-1|A0A286ZQW4_PIG Computationally mapped isoform of Nucleoporin 210 like OS=Sus scrofa OX=9823 GN=NUP210L PE=3 SV=2 CANONICAL=A0A286ZQW4-1" }, "locus": { "chromosome": "4", "start_pos": 95697193, "end_pos": 95574261, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088496.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088496.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071623.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071623.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1598, "start_aa": "Thr", "end_pos": 1598, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1598", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R363", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R363" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nuclear pore", "id": "GO:0005643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005643", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQW4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQW4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1068, "end_pos": 1070, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1227, "end_pos": 1229, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1261, "end_pos": 1263, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1340, "end_pos": 1342, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1551, "end_pos": 1553, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1610, "end_pos": 1612, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1624, "end_pos": 1626, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 319, "end_pos": 321, "annotation": "n_glycosylation_sequon" }, { "start_pos": 363, "end_pos": 365, "annotation": "n_glycosylation_sequon" }, { "start_pos": 431, "end_pos": 433, "annotation": "n_glycosylation_sequon" }, { "start_pos": 448, "end_pos": 450, "annotation": "n_glycosylation_sequon" }, { "start_pos": 510, "end_pos": 512, "annotation": "n_glycosylation_sequon" }, { "start_pos": 517, "end_pos": 519, "annotation": "n_glycosylation_sequon" }, { "start_pos": 537, "end_pos": 539, "annotation": "n_glycosylation_sequon" }, { "start_pos": 760, "end_pos": 762, "annotation": "n_glycosylation_sequon" }, { "start_pos": 772, "end_pos": 774, "annotation": "n_glycosylation_sequon" }, { "start_pos": 854, "end_pos": 856, "annotation": "n_glycosylation_sequon" }, { "start_pos": 879, "end_pos": 881, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZQW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW4" }, { "id": "SM00635", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00635" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BIG2", "eco_id": "ECO_0000259", "start_pos": 1029, "end_pos": 1104, "start_aa": "Val", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1598 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1068, "end_pos": 1070 }, { "start_pos": 1227, "end_pos": 1229 }, { "start_pos": 1261, "end_pos": 1263 }, { "start_pos": 1340, "end_pos": 1342 }, { "start_pos": 1551, "end_pos": 1553 }, { "start_pos": 1610, "end_pos": 1612 }, { "start_pos": 1624, "end_pos": 1626 }, { "start_pos": 192, "end_pos": 194 }, { "start_pos": 319, "end_pos": 321 }, { "start_pos": 363, "end_pos": 365 }, { "start_pos": 431, "end_pos": 433 }, { "start_pos": 448, "end_pos": 450 }, { "start_pos": 510, "end_pos": 512 }, { "start_pos": 517, "end_pos": 519 }, { "start_pos": 537, "end_pos": 539 }, { "start_pos": 760, "end_pos": 762 }, { "start_pos": 772, "end_pos": 774 }, { "start_pos": 854, "end_pos": 856 }, { "start_pos": 879, "end_pos": 881 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZQW7-1", "uniprot_ac": "A0A286ZQW7", "uniprot_id": "A0A286ZQW7_PIG", "mass": { "chemical_mass": 75868.0, "monoisotopic_mass": 75868.0 }, "refseq": {}, "gene_names": [ { "name": "PHF21A", "type": "recommended", "evidence": [ { "id": "A0A286ZQW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW7" } ] } ], "protein_names": [ { "name": "PHD finger protein 21A", "type": "synonym", "evidence": [ { "id": "A0A286ZQW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZQW7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PHF21A", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQW7", "locus": { "chromosome": "2", "start_pos": 16545272, "end_pos": 16344322, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023974", "url": "https://www.ensembl.org/id/ENSSSCG00000023974" } ] } } ], "crossref": [ { "id": "A0A286ZQW7", "url": 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"MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRKNLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQFHHHHTPAASSPSLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINNQKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIMAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTIKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEHWPKGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSSSISKCMEMKSTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANATTSTPAPSPSSSSSQSCTANCNQGEETK", "length": 635, "header": "tr|A0A287ASV5-1|A0A287ASV5_PIG Computationally mapped isoform of PHD finger protein 21A OS=Sus scrofa OX=9823 GN=PHF21A PE=1 SV=2 CANONICAL=A0A286ZQW7-1" }, "locus": { "chromosome": "2", "start_pos": 16540634, "end_pos": 16381344, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058477.3", "url": 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"MYLWPCLKTRQGELKESLIFFLSNQNADLKKQLHELQAKITALSEKQKRVVEQLRKNLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQFHHHHTPAASSPSLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINNQKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIMAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTIKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPTSPPSSHPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAVPFLFPAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSSSISKCMEMKSTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANATTSTPAPSPSSSSSQSCTANCNQGEETK", "length": 684, "header": "tr|F1SI97-1|A0A286ZQW7_PIG Computationally mapped isoform of PHD finger protein 21A OS=Sus scrofa OX=9823 GN=PHF21A PE=1 SV=5 CANONICAL=A0A286ZQW7-1" }, "locus": { "chromosome": "2", "start_pos": 16540634, "end_pos": 16388631, "strand": "-", "evidence": [ { "database": "Ensembl 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"https://www.ebi.ac.uk/interpro/entry/IPR022181", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12112", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12112", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12112:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12112:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12496", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12496", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13716", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13716", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZRA1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRA1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AR01", "url": "https://www.uniprot.org/uniprotkb/A0A287AR01", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AR01-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AR01-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9F5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9F5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9F5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9F5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQN8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQN8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQN8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQN8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSSSWPATCQRTSSPNDRSLCTPRTSSCAARFAVNWKSARTLVPVDTNTELSPSNFDWEVETDRSDSPAGGDIGPPNGASERMLEVEEEKTISTEEPEQITSECGEERYTEKNEGHPAPPMDYILVNHEENSPPQPEACESRESTSQLEELQMDSKETGLLATQLANLSDTCQLASLKERNHLSAERPPSKDGEKSSFESPGQDQSWMVLVHSEVGESSSEMRDTGPGQSGQALEPASGHSLGTGPQMQVLGEMKPVESLTLEEASGLGSQSQKSKSRGRAGPDAVMLQPVTHDNEWEMLSPQPSQKNIIPETEIEEETEFLEPRTRKPRPNGLLSEDEGMDIPFEEGMLSPTAADMRPEPPNSLDLNDSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTGHEDPTANRDSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDMKVIEPYKKVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAEDYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSCRINTTLIIKISTNIFFLFFFFSSKFSSKIKYVSSLSELSGLIPMDCIHIPESIIKEKNDPFSVFF", "length": 644, "header": "tr|A0A286ZRA1-1|A0A286ZRA1_PIG Isoform 1 of Protein prune homolog 2 OS=Sus scrofa OX=9823 GN= PE=1 SV=3 CANONICAL=A0A286ZRA1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRA1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1/entry#A0A286ZRA1-1", "sequence": { "sequence": "MSSSSWPATCQRTSSPNDRSLCTPRTSSCAARFAVNWKSARTLVPVDTNTELSPSNFDWEVETDRSDSPAGGDIGPPNGASERMLEVEEEKTISTEEPEQITSECGEERYTEKNEGHPAPPMDYILVNHEENSPPQPEACESRESTSQLEELQMDSKETGLLATQLANLSDTCQLASLKERNHLSAERPPSKDGEKSSFESPGQDQSWMVLVHSEVGESSSEMRDTGPGQSGQALEPASGHSLGTGPQMQVLGEMKPVESLTLEEASGLGSQSQKSKSRGRAGPDAVMLQPVTHDNEWEMLSPQPSQKNIIPETEIEEETEFLEPRTRKPRPNGLLSEDEGMDIPFEEGMLSPTAADMRPEPPNSLDLNDSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTGHEDPTANRDSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDMKVIEPYKKVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAEDYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSCRINTTLIIKISTNIFFLFFFFSSKFSSKIKYVSSLSELSGLIPMDCIHIPESIIKEKNDPFSVFF", "length": 644, "header": "tr|A0A286ZRA1-1|A0A286ZRA1_PIG Isoform 1 of Protein prune homolog 2 OS=Sus scrofa OX=9823 GN= PE=1 SV=3 CANONICAL=A0A286ZRA1-1" }, "locus": { "chromosome": "1", "start_pos": 229666319, "end_pos": 229596544, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048113.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048113.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034157.3", "url": "https://www.ensembl.org/id/ENSSSCP00000034157.3" } ] } }, { "isoform_ac": "A0A287AR01-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1/entry#A0A287AR01-1", "sequence": { "sequence": "MLRSCNQASLSPFGNQPPLVLRRLLSEDEGMDIPFEEGMLSPTAADMRPEPPNSLDLNDSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTGHEDPTANRDSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDMKVIEPYKKVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAEDYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFISSKFSSKIKYVSSLSELSGLIPMDCIHIPESIIKLDEELREASEAAKTSCLYNDPEMSSMEKDIHLKLKEL", "length": 352, "header": "tr|A0A287AR01-1|A0A287AR01_PIG Computationally mapped isoform of Protein prune homolog 2 OS=Sus scrofa OX=9823 GN= PE=1 SV=2 CANONICAL=A0A286ZRA1-1" }, "locus": { "chromosome": "1", "start_pos": 229643814, "end_pos": 229581653, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056691.2", "url": "https://www.ensembl.org/id/ENSSSCT00000056691.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046485.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046485.2" } ] } }, { "isoform_ac": "A0A287B9F5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1/entry#A0A287B9F5-1", "sequence": { "sequence": "MARADVPRVKPPNSLDLNDSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTGHGKSPNSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDMKVIEPYKKVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAEDYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSCRINTTLIIKISTNIFFLFFFFSSKFSSKIKYVSSLSELSGLIPMDCIHIPESIIKEKNDPFSVFF", "length": 290, "header": "tr|A0A287B9F5-1|A0A287B9F5_PIG Computationally mapped isoform of Protein prune homolog 2 OS=Sus scrofa OX=9823 GN= PE=1 SV=2 CANONICAL=A0A286ZRA1-1" }, "locus": { "chromosome": "1", "start_pos": 229621468, "end_pos": 229596544, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058878.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058878.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052964.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052964.2" } ] } }, { "isoform_ac": "A0A8W4FQN8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1/entry#A0A8W4FQN8-1", "sequence": { "sequence": "RLLSEDEGMDIPFEEGMLSPTAADMRPEPPNSLDLNDSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTGHEDPTANRDSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDMKVIEPYKKVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAEDYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFISSKFSSKIKYVSSLSELSGLIPMDCIHIPESIIK", "length": 293, "header": "tr|A0A8W4FQN8-1|A0A8W4FQN8_PIG Computationally mapped isoform of Protein prune homolog 2 OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZRA1-1" }, "locus": { "chromosome": "1", "start_pos": 229623702, "end_pos": 229596989, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093492.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093492.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080725.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080725.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRA1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRA1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRA1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 369, "end_pos": 371, "annotation": "n_glycosylation_sequon" }, { "start_pos": 384, "end_pos": 386, "annotation": "n_glycosylation_sequon" }, { "start_pos": 582, "end_pos": 584, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZRA1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 644, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZRA1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZRA1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZRA1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA1" }, { "id": "PF13716", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13716" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CRAL-TRIO", "eco_id": "ECO_0000259", "start_pos": 494, "end_pos": 629, "start_aa": "Ala", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 168, "end_pos": 170 }, { "start_pos": 369, "end_pos": 371 }, { "start_pos": 384, "end_pos": 386 }, { "start_pos": 582, "end_pos": 584 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"evidence": [ { "id": "A0A286ZRA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRA4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRA4", "locus": {} } ], "crossref": [ { "id": "A0A286ZRA4", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZRA4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000037718", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037718", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": 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"MGTVNCRQGQHAQMAAPRKQGGNIQGPWVRGWKSLWSGVGTTRSGLEELWGLRGHRCLHQEPLGPAPLVEKPLPEWPVPQFINLFLPEFPMRPLRGHQQLKILGLVAKGSFGTVLKVLDCDQKAVFAVKVVAKAKVLQRDILRQCKEEVSIQRQINHPFVHSFGDSWQGKRHLFLMCSYCSTDLYSLWSTVGCFAEASIRLFAAELILVLCYLHDLGIIHRDVKMENILLDERGHLKLTDFGLSRHLPQGARAYTICGSLQYMAPEVLSGGPYNHAADWWSLGVLLFSLATGKFPVPAERDHVAMLASVTHCDSEIPASLNQGLSLLLHELLCQNPLHRLRYLHHFQVHPFFRGVAFDPELLQKHPVNLVLETQATQSSPSSESIFFKDFECNLESYLVHPNLA", "length": 404, "header": "tr|A0A286ZRK4-1|A0A286ZRK4_PIG Isoform 1 of Ribosomal protein S6 kinase related OS=Sus scrofa OX=9823 GN=KIAA0100 PE=4 SV=2 CANONICAL=A0A286ZRK4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK4/entry#A0A286ZRK4-1", "sequence": { "sequence": "MGTVNCRQGQHAQMAAPRKQGGNIQGPWVRGWKSLWSGVGTTRSGLEELWGLRGHRCLHQEPLGPAPLVEKPLPEWPVPQFINLFLPEFPMRPLRGHQQLKILGLVAKGSFGTVLKVLDCDQKAVFAVKVVAKAKVLQRDILRQCKEEVSIQRQINHPFVHSFGDSWQGKRHLFLMCSYCSTDLYSLWSTVGCFAEASIRLFAAELILVLCYLHDLGIIHRDVKMENILLDERGHLKLTDFGLSRHLPQGARAYTICGSLQYMAPEVLSGGPYNHAADWWSLGVLLFSLATGKFPVPAERDHVAMLASVTHCDSEIPASLNQGLSLLLHELLCQNPLHRLRYLHHFQVHPFFRGVAFDPELLQKHPVNLVLETQATQSSPSSESIFFKDFECNLESYLVHPNLA", "length": 404, "header": "tr|A0A286ZRK4-1|A0A286ZRK4_PIG Isoform 1 of Ribosomal protein S6 kinase related OS=Sus scrofa OX=9823 GN=KIAA0100 PE=4 SV=2 CANONICAL=A0A286ZRK4-1" }, "locus": { "chromosome": "12", "start_pos": 44859535, "end_pos": 44855946, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043280.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043280.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034258.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034258.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRK4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRK4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK4" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRK4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRK4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZRK4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 404, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZRK4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZRK4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZRK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK4" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 100, "end_pos": 352, "start_aa": "Leu", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", 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"table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZRP0-1", "uniprot_ac": "A0A286ZRP0", "uniprot_id": "A0A286ZRP0_PIG", "mass": { "chemical_mass": 214074.0, "monoisotopic_mass": 214074.0 }, "refseq": {}, "gene_names": [ { "name": "DENND4A", "type": "recommended", "evidence": [ { "id": "A0A286ZRP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" } ] } ], "protein_names": [ { "name": "DENN domain containing 4A", "type": "synonym", "evidence": [ { "id": "A0A286ZRP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DENND4A", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0", "locus": { "chromosome": "1", "start_pos": 163660244, "end_pos": 163790334, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004938", "url": "https://www.ensembl.org/id/ENSSSCG00000004938" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004938", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004938", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001194", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001194", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005112", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005112", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005113", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005113", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043153", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043153", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051696", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051696", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12296", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12296", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12296:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12296:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02141", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02141", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03455", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03455", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10240", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10240", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8876198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZRP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAY0", "url": "https://www.uniprot.org/uniprotkb/A0A287AAY0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAY0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAY0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJK3", "url": "https://www.uniprot.org/uniprotkb/F1SJK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJK3-1", "url": "https://www.uniprot.org/uniprotkb/F1SJK3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1914, "header": "tr|A0A286ZRP0-1|A0A286ZRP0_PIG Isoform 1 of DENN domain containing 4A OS=Sus scrofa OX=9823 GN=DENND4A PE=4 SV=2 CANONICAL=A0A286ZRP0-1" }, "locus": { "chromosome": "1", "start_pos": 163749699, "end_pos": 163662679, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044216.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044216.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034150.3", "url": "https://www.ensembl.org/id/ENSSSCP00000034150.3" } ] } }, { "isoform_ac": "A0A287AAY0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0/entry#A0A287AAY0-1", "sequence": { "sequence": 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"length": 1906, "header": "tr|A0A287AAY0-1|A0A287AAY0_PIG Computationally mapped isoform of DENN domain containing 4A OS=Sus scrofa OX=9823 GN=DENND4A PE=4 SV=3 CANONICAL=A0A286ZRP0-1" }, "locus": { "chromosome": "1", "start_pos": 163749699, "end_pos": 163662679, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039194.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039194.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041049.3", "url": "https://www.ensembl.org/id/ENSSSCP00000041049.3" } ] } }, { "isoform_ac": "F1SJK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0/entry#F1SJK3-1", "sequence": { "sequence": "MIEDKGPRVADYFVVAGLTDTSKPLEEEIHFNDACHKVAKPKEPITDVSVIIKSLGEEVPRDYTCIDVTPSGLSADLNNGSLVGPQIFLCYRRGRDKPPLTDLGVLYDWKERLKQGCEIIQSTPYGRPANISGSTSSQRIYITYRRASENMTQNTLAVTDICIIIPSKGESPPHTFCKVDKNLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPQEDYESFSLPESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYSEENLTEKQRFLLGLASSSDEKSDSSKTIHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPSPQRPRILVQLSPHDSLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILIHSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYDPPPDVSCVDLDTNTISQTGDKKNVAWKILPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGLMDLAMNDYDFNYGKRLHMIDLEIQEAFLCFMASILKGYRSYLRPITQAPSETATDAASLFALQAFLRSRDRSHQKFYNMMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKSGETRLIELDESFKSEHTVFVTPPEIPHLPNGEEPPLQYSYNGFPVLKNNLFERPEGFLQTRKSNLPSKSSSPSSPSPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFICLPAYVKVCHSKVRALKTAYDVLKKMQSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMKKAGIDPNAITYGYYNKAVLESTWPSRSRSDYFLWTKVRNVVLGVAQFKRALKKHAHLSQTTLSGGQSDLGYNSLSKDEVRRGNTSTEDIQEEKDKKGSDSSSLSESESAKGSADCLPKLDYQSSSSIVRLNSKNNNADKISGESTESTSEPPLISSFEDTNDTGNIQSRCFRKRHKSDNEPNLQQQMSWGNRNRNLSGGVLMGLMLNRVNQEANPGDMVEKLGADAKILSSVISKSTRPNSLDIGKPSLRSKRDSLEKESSDDDTPFDGSNCLVDKVDSPVIFDLEDLDGETDGSKAADVAPQNPKRSQCLNSSFSVKPFEKTDVATGFDPLSLLVAETEQQQKEEGEEEEDDSKSISTPSARRDLAEEIVMYMNNMTSPLTSRTPSIDLQRACDDKATTKKSPTLVKACRRSSLPPNSPRPVRLTKSKSYSKSEDRPRDRLWSSPAFSPTCPFREESQAALTHSSPSFNLDTLLVPKLDVLRNSMFTAGKGVAEKASKWYSRFTMYTTSSKDQSSDRTSLSSVGAQDSESTSLTDEDVCHEVEGATSQESSATSGTKGVDFSRTSLESSASLEGSLSKFAIPGKSEVASSCNTSNANIFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLNIEIRDLRRPGRYFLKSSPSTENMHFPSSFSSQTRQSCISTSASGLDTSVISVQGNFDLNSKSKLENTCARSIQIPTDKSKTSMSKCPIFPMARSVGTYGPLDKEDTGGQKLIPTGSLPATLQGATDALGLEWHLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKYSKIPRHCMSEDSKYVLIQMLWDNMKLHQDPGQPLYILWNAHTQKYPMVHLLQKGDNSFNQELLKNMVKSIKMNDVYGPMSQILETLNKCPHFKRQRSLYREILFLSLVALGRENIDIDAFDKEYKMAYDRLTPNQVKSTHNCDRPPSTGVMECRKTFGEPYL", "length": 1862, "header": "tr|F1SJK3-1|A0A286ZRP0_PIG Computationally mapped isoform of DENN domain containing 4A OS=Sus scrofa OX=9823 GN=DENND4A PE=4 SV=4 CANONICAL=A0A286ZRP0-1" }, "locus": { "chromosome": "1", "start_pos": 163749699, "end_pos": 163662679, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005449.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005449.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005314.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005314.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1676, "start_aa": "Thr", "end_pos": 1676, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1676", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 679, "start_aa": "Thr", "end_pos": 679, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr679", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJK3", "url": "https://www.uniprot.org/uniprotkb/F1SJK3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8876198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "resource": "Reactome", "description": "RAB GEFs exchange GTP for GDP on RABs" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of Rab protein signal transduction", "id": "GO:0032483", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032483", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1042, "end_pos": 1044, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1076, "end_pos": 1078, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1193, "end_pos": 1195, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1257, "end_pos": 1259, "annotation": "n_glycosylation_sequon" }, { "start_pos": 130, "end_pos": 132, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1474, "end_pos": 1476, "annotation": "n_glycosylation_sequon" }, { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1520, "end_pos": 1522, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1787, "end_pos": 1789, "annotation": "n_glycosylation_sequon" }, { "start_pos": 184, "end_pos": 186, "annotation": "n_glycosylation_sequon" }, { "start_pos": 283, "end_pos": 285, "annotation": "n_glycosylation_sequon" }, { "start_pos": 79, "end_pos": 81, "annotation": "n_glycosylation_sequon" }, { "start_pos": 964, "end_pos": 966, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZRP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" }, { "id": "PS51498", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51498" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MABP", "eco_id": "ECO_0000259", "start_pos": 42, "end_pos": 200, "start_aa": "Lys", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZRP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP0" }, { "id": "PS50211", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50211" } ], "ann_type": "Domain_Extent_Annotation", 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050729", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050729", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PECHYAT", "url": "https://omabrowser.org/oma/group/PECHYAT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AJB0", "url": "https://www.orthodb.org/?gene=A0A287AJB0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23176", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23176", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23176:SF107", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23176:SF107", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00018", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00018", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00397", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00397", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00620", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00620", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16618", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16618", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013424", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013424", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9035034", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9035034", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJ58-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLT7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLT7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLT7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLT7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A413", "url": "https://www.uniprot.org/uniprotkb/A0A287A413", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A413-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A413-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJB0", "url": "https://www.uniprot.org/uniprotkb/A0A287AJB0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJB0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AJB0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AV22", "url": "https://www.uniprot.org/uniprotkb/A0A287AV22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AV22-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AV22-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYI7", "url": "https://www.uniprot.org/uniprotkb/A0A287AYI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYI7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5D5", "url": "https://www.uniprot.org/uniprotkb/A0A287B5D5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5D5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5D5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJX3", "url": "https://www.uniprot.org/uniprotkb/A0A287BJX3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJX3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWC6", "url": "https://www.uniprot.org/uniprotkb/F1RWC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RWC6-1", "url": "https://www.uniprot.org/uniprotkb/F1RWC6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQELLSSEENYQSICYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKPLLPLLHLPCFHGVLPVFPTFTQGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 837, "header": "tr|A0A286ZJ58-1|A0A286ZJ58_PIG Isoform 1 of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=2 CANONICAL=A0A286ZJ58-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJ58-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A286ZJ58-1", "sequence": { "sequence": "MADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQELLSSEENYQSICYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKPLLPLLHLPCFHGVLPVFPTFTQGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 837, "header": "tr|A0A286ZJ58-1|A0A286ZJ58_PIG Isoform 1 of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=2 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553215, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050368.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050368.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031588.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031588.2" } ] } }, { "isoform_ac": "A0A286ZLT7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A286ZLT7-1", "sequence": { "sequence": "MADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQELLSSEENYQSICYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCYPENESSPSSPKHQDTGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFEVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 806, "header": "tr|A0A286ZLT7-1|A0A286ZLT7_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=1 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553215, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041109.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041109.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032413.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032413.1" } ] } }, { "isoform_ac": "A0A287A413-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A287A413-1", "sequence": { "sequence": "MADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQEYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCYPENESSPSSPKHQDTGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 765, "header": "tr|A0A287A413-1|A0A287A413_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=1 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553215, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066336.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066336.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038497.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038497.1" } ] } }, { "isoform_ac": "A0A287AJB0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A287AJB0-1", "sequence": { "sequence": "MADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQELLSSEENYQSICYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCYPENESSPSSPKHQDTPLLPLLHLPCFHGVLPVFPTFTQGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 862, "header": "tr|A0A287AJB0-1|A0A287AJB0_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=1 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553215, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062860.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062860.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043974.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043974.1" } ] } }, { "isoform_ac": "A0A287AV22-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A287AV22-1", "sequence": { "sequence": "MADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQELLSSEENYQSICYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCYPENESSPSSPKHQDTGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWSFCHQGSVSELLLSLLSSWKNSVSRRPAVAYVKSDPVSAVTFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 880, "header": "tr|A0A287AV22-1|A0A287AV22_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=1 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553215, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045314.1", "url": "https://www.ensembl.org/id/ENSSSCT00000045314.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047715.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047715.1" } ] } }, { "isoform_ac": "A0A287AYI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A287AYI7-1", "sequence": { "sequence": "IKMADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQEWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCYPENESSPSSPKHQDTGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 794, "header": "tr|A0A287AYI7-1|A0A287AYI7_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=2 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553221, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056090.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056090.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048944.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048944.2" } ] } }, { "isoform_ac": "A0A287B5D5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A287B5D5-1", "sequence": { "sequence": "MADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQEGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 698, "header": "tr|A0A287B5D5-1|A0A287B5D5_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=1 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553215, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045467.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045467.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051308.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051308.1" } ] } }, { "isoform_ac": "A0A287BJX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#A0A287BJX3-1", "sequence": { "sequence": "IKMADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQELLSSEENYQSICYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 816, "header": "tr|A0A287BJX3-1|A0A287BJX3_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=2 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553221, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042987.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042987.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056458.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056458.2" } ] } }, { "isoform_ac": "F1RWC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58/entry#F1RWC6-1", "sequence": { "sequence": "IKMADRGGKIVPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVGRKALMPPVKQAAGLPNNSVKMMQSLHLQRSTENVNKLPELSSFGKPSAAVQGSGLIRDANQNFGPSYIPGQTHNLSLDLTHNNGKFNSDSHSPKVPGQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRSTRDTNISKGDFQSPGDQEWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCYPENESSPSSPKHQDTASSPKGQEKYGLLNVTKISENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLRGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTISNQVVEPDEAIEEETPDSPGIEKHDREKDHKDPKKFRSTKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLANLCQRENSTVPKFVKLCIEHVEEYGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVSAVKDLIRQLPKPNQDTMQILFRHLKRVIENGERNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLEINSIFGR", "length": 799, "header": "tr|F1RWC6-1|F1RWC6_PIG Computationally mapped isoform of Rho GTPase-activating protein 12 OS=Sus scrofa OX=9823 GN=ARHGAP12 PE=1 SV=4 CANONICAL=A0A286ZJ58-1" }, "locus": { "chromosome": "10", "start_pos": 42553221, "end_pos": 42460369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012068.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012068.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011760.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011760.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" }, { "id": "R-SSC-9013424", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013424", "resource": "Reactome", "description": "RHOV GTPase cycle" }, { "id": "R-SSC-9035034", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9035034", "resource": "Reactome", "description": "RHOF GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2N892-1", "protein_name": "Rho GTPase-activating protein 12", "gene_name": "Arhgap12", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAERSGKIAAGQVYIEVEYDYEYEAKDRKIVIRQGERYILVKKTNDDWWQVRLDENSKAFYVPAQYVKEVTRKALMPPVKQAAGLPNNSMKTIQSMHLQRSTENVNKMPELSSFGKPSSSVQGTGLTRDANQNFGSNYNSGQTLNLSLDLTHNNGKFNSDSHSPKVSSQNRTRLFGHFPGPEFLDVEKTSFSQEQSCDSAGEGSERTHQDSESGDELSSSSTEQMRATTPPSQGRPDSPVYANLQELKISQSALPPLPGSPAIQVNGEWETHKDSSGRCYYYNRATQERTWKPPRWARDTGTNRDFQSPGELEPFSSEENYHSSCYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTKEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTTTKNCLPENESSPTSSKHQDPGQEKYGLLNVTKITENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDAVINDWFKVLSSTINNQAAEADEAADEEAPDSPGVEKQDKEKDQKDLKKLRSMKGSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGCNLASLCQRENGTVPKFVKLCIEHVEEHGLDVDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVVTGALKMFFRELPEPLFTFNHFNDFVNAIKQDPRQRVTAVKDLIRQLPKPNQDTMQILFRHLKRVIENGEKNRMTYQSIAIVFGPTLLKPERETGNIAVHTVYQNQIVELILLELSTIFGR", "length": 838 }, "evidence": [ { "id": "A0A286ZJ58", "url": "https://omabrowser.org/oma/group/A0A286ZJ58/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AC58GV37-1", "protein_name": "Rho GTPase-activating protein 12b isoform X1", "gene_name": "arhgap12b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSERDGRCDLSIAPGQVYIEVEYDYEYKAKDKLISIRQGECYMLVRKTNEDWWQVRREEGTKAFYVPAQYVREVRRALMPPPKPRAKPPNVLEITHCRSSNENLNQRAPTEKSTFGRPPPSTTPSPLPGQQTPPLLLRDSNHNPGMKSVVAELTLLNNNNHHNFHHANPTLPQGRAESPPRDQGCQGKLTGGLSVDTDGSVSPGDGVEKMRNDSESGDELSSSSTEHIQSVSLSGQGRPESPVYTNLQELKICQSSVPPVPSTSPLHVLGDWETHKDTSGRNFYFNRTTQERTWKPPRSRDNGVSRGDTSNTGDMEPLSSEENCPSTHSSQSDSQYGSPPRGWSEELDEHGHTLYVSEYTNEKWIKHVDEQGRPYYYSADGSRSEWELPKYNLSPPISGEAPKSHSLERKQQEPIVLTKWRHSTYVLDISDKTTWFYLFANKKLPFKNRWFSVNHPPRGFGLPVYREPSEKCGVLNVTKITEHGKKVRKNWASTWTVLQGSSLLFAKGQGSGTSWSYCHNGSFPELLLSLLSNWKRSIKPRPAVSYTHCRRARASSFGGNQSKPEFTVDLRGGSVEWASKEKSSKKHVIELKTRVGTELLIQSEIDSVINDWFRALSETINTHAWESDEAIEEDMPESPGSEKHDKEKDPRDSKKNRVVKNSSMESSEQKKTRVKLKKFLTRRPTLQAVRDKGYIKDQVFGCSLTALCQREGTSVPNFVKMCIEHVENTGLNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLDDSKWEDIHVTTGALKMLFRELPEPLFTYASFNDFVEAIKNSDYKQRVQSIKDLIKQLPKPNQETMKVLFKHLKRVIDHGEVNRMTTQSVAIVFGPTLLRPEIETGNMAVHMVYQNQIVELILLEYENIFGR", "length": 893 }, "evidence": [ { "id": "A0A286ZJ58", "url": "https://omabrowser.org/oma/group/A0A286ZJ58/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D3ZDI5-1", "protein_name": "Rho GTPase-activating protein 12", "gene_name": "Arhgap12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAERSGKIASGQVYIEVEYDYEYEAKDRKIVIRQGERYLLVKKTNDDWWQVRLDENSKAFYVPAQYVKEVTRKALMPPVKQTTGLPNNSMKTTQSMHLQRSTENVNKMPELSSFGKPSSSVQGTGLIRDANQNFGSNYNSGQTLNLSLDLTHNNGKFNSDSHSPKVSSQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERTHQDSESGDELSSSSTEQMRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQVNGEWETHKDSSGRCYYYNRTTQERTWKPPRWARDVSTSRDFQSPGEQEPLSSEENYHSSCFSQSDSQCGSPPRGWSEELDERGHTLYTSDYTKEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDSNDKDSPTSTKLCLPENESPPTSTKHQDPGQEKYGLLNVTKITENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGAAIEMASKDKSSKKNVFELKTRQGTELLIQSDNDAVINDWFKVLSSTINNQVAEADEAAEEEAPDSPGVEKQDKEKDQKELKKLRSMKGSSMDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGSNLANLCQRENGTVPKFVKLCIEHVEEHGLDVDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVTAVKDLIRQLPKPNQDTMQILFRHLKRVIENGEKNRMTYQSIAIVFGPTLLKPERETGNIAVHTVYQNQIVELILLELSTVFGR", "length": 838 }, "evidence": [ { "id": "A0A286ZJ58", "url": "https://omabrowser.org/oma/group/A0A286ZJ58/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8C0D4-1", "protein_name": "Rho GTPase-activating protein 12", "gene_name": "Arhgap12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAERSGKITAGQAYIEVEYDYEYDAKDRKIVIRQGERYLLVKKTNDDWWQVRPDENSKAFYVPAQYVKEVTRKALMPPVKQATGLPNNSMKTIQSMHLQRSTENVNKMPELSSFGKPSSSVQGTGLIRDANQNFGSNYNSGQTLNLSLDLTHNNGKFNSDSHSPKVSSQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQDSESGDELSSSSTEQMRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQVNGEWETHKDSSGRCYYYNRTTQERTWKPPRWARDVSTSRDFQSPGEQEPLSSEENYHSSCFSQSDSQCGSPPRGWSEELDERGHTLYTSDYTKEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDSNDKDSPTTTKLCLPENESPPTSSKHQDPGQEKYGLLNVTKITENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGAVIEMASKDKSSKKNVFELKTRQGTELLIQSDNDAVINDWFKVLSSTINNQVAEADEAAEEETPDSPGVEKHDKEKDQKELKKLRSMKGSSMDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGSNLANLCQRENGTVPKFVKLCIEHVEEHGLDVDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVTAVKDLIRQLPKPNQDTMQILFRHLKRVIENGEKNRMTYQSIAIVFGPTLLKPERETGNIAVHTVYQNQIVELILLELSTVFGR", "length": 838 }, "evidence": [ { "id": "A0A286ZJ58", "url": "https://omabrowser.org/oma/group/A0A286ZJ58/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IWW6-1", "protein_name": "Rho GTPase-activating protein 12", "gene_name": "ARHGAP12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKMADRSGKIIPGQVYIEVEYDYEYEAKDRKIVIKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVTRKALMPPVKQVAGLPNNSTKIMQSLHLQRSTENVNKLPELSSFGKPSSSVQGTGLIRDANQNFGPSYNQGQTVNLSLDLTHNNGKFNNDSHSPKVSSQNRTRSFGHFPGPEFLDVEKTSFSQEQSCDSAGEGSERIHQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQINGEWETHKDSSGRCYYYNRGTQERTWKPPRWTRDASISKGDFQNPGDQELLSSEENYYSTSYSQSDSQCGSPPRGWSEELDERGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCFPENESSPSSPKHQDTASSPKDQEKYGLLNVTKIAENGKKVRKNWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGATIEMASKDKSSKKNVFELKTRQGTELLIQSDNDTVINDWFKVLSSTINNQAVETDEGIEEEIPDSPGIEKHDKEKEQKDPKKLRSFKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGSNLANLCQRENGTVPKFVKLCIEHVEEHGLDIDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVAAVKDLIRQLPKPNQDTMQILFRHLRRVIENGEKNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLELSSIFGR", "length": 846 }, "evidence": [ { "id": "A0A286ZJ58", "url": "https://omabrowser.org/oma/group/A0A286ZJ58/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" }, { "name": "phagocytosis, engulfment", "id": "GO:0006911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006911", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" }, { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" }, { "name": "negative regulation of small GTPase mediated signal transduction", "id": "GO:0051058", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051058", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" }, { "name": "small GTPase-mediated signal transduction", "id": "GO:0007264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007264", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" }, { "name": "morphogenesis of an epithelial sheet", "id": "GO:0002011", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002011", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "phagocytic cup", "id": "GO:0001891", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001891", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJ58", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJ58" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 145, "end_pos": 147, "annotation": "n_glycosylation_sequon" }, { "start_pos": 170, "end_pos": 172, "annotation": "n_glycosylation_sequon" }, { "start_pos": 301, 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"length": 1097, "header": "tr|A0A286ZJP9-1|A0A286ZJP9_PIG Isoform 1 of Neurabin-1 OS=Sus scrofa OX=9823 GN=PPP1R9A PE=1 SV=2 CANONICAL=A0A286ZJP9-1" }, "locus": { "chromosome": "9", "start_pos": 74938071, "end_pos": 74637880, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065331.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065331.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031704.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031704.2" } ] } }, { "isoform_ac": "A0A286ZKM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9/entry#A0A286ZKM9-1", "sequence": { "sequence": "MLKTESSGERTTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKAKEGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPSENAAVIAKTRGKGGPSSPQRRMKPKEFLEKTDGSVVKLESSVSERISRFDTMYDGPSYSKFTETRKMFERSVHESGQNNRYSPKKEKAGGGEPPEEWGGSKSNRGSTDSLDSLSSRTEAVSPTVSQLSAVFENTDSPGAIISEKTENNEYSVTGHYPLNLPSVTVTNLDTFGHLKDSNSWSPPSKHSDDAEDAEKSNVIPVLEVASKSTSLASVPSEEAEQNKEAEDSTSNQESSDRIDRDFPEEPCAENKAVPESEIPSPQNEPSEDAEANLVGSEAAMQQKKDLAGGDFTSAVVSRFACGKELLEDSHHFGSSHVYMHSDYNVYRVRSRYNSDWGETGTEQDEQEDSDENSYYQPDLEYSEIVGLPEEEDIPANRKIKFSSAPIKVFSTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLEQHYAQYDADDDETGEYATDEEEDEVGPVLPGSDLAIEVFELPENEDMFSPSDLDTTKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKTQLQQNIEENKERMLKLESYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEAERKKIEDLEKAHLVEVQGLQVRIRDLEAEVFRLLKQNGTQVNNNNNIFERRTSLGEVSKGDSIENLDVKQTSCHDGLSQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPSRTRLYDSVSSTDGEDSLERKPSNSFYNHMHITKSLLPKGLRTSPESDSGAPSLTPVAGSVPFSSDHIAELQEGPLHLEREPSSSPGGGTSLSSPSKSEHDNEESLCHHQATTKKILQEKDGATGPRSLRASSSLVVRGGKIKRKFVDLGAPLRRSSNKGKKWKEKEKEANRFSPGGRIFRSRLEPWKPKPASMCSTGLPFSWFNESRKGSYSFRNLPSPKSPLQPSPETLISDKKGSKNFTFTDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDEALGMTSSQDRAVVKKKLKEMKVSLEKARKAQEKMEKQREKLRRKEQEQMQRKSKKTERMAAATEGAGEQ", "length": 1246, "header": "tr|A0A286ZKM9-1|A0A286ZKM9_PIG Computationally mapped isoform of Protein phosphatase 1 regulatory subunit 9A OS=Sus scrofa OX=9823 GN=PPP1R9A PE=1 SV=2 CANONICAL=A0A286ZJP9-1" }, "locus": { "chromosome": "9", "start_pos": 74938071, "end_pos": 74637880, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053487.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053487.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032024.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032024.2" } ] } }, { "isoform_ac": "A0A287A9Q2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9/entry#A0A287A9Q2-1", "sequence": { "sequence": "MLKTESSGERTTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKAKEGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPSENAAVIAKTRGKGGPSSPQRRMKPKEFLEKTDGSVVKLESSVSERISRFDTMYDGPSYSKFTETRKMFERSVHESGQNNRYSPKKEKAGGGEPPEEWGGSKSNRGSTDSLDSLSSRTEAVSPTVSQLSAVFENTDSPGAIISEKTENNEYSVTGHYPLNLPSVTVTNLDTFGHLKDSNSWSPPSKHSDDAEDAEKSNVIPVLEVASKSTSLASVPSEEAEQNKEAEDSTSNQESSDRIDRDFPEEPCAENKAVPESEIPSPQNEPSEDAEANLVGSEAAMQQKKDLAGGDFTSAVVSRFACGKELLEDSHHFGSSHVYMHSDYNVYRVRSRYNSDWGETGTEQDEQEDSDENSYYQPDLEYSEIVGLPEEEDIPANRKIKFSSAPIKVFSTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLEQHYAQYDADDDENTVAELQGVSGNCNNNNNYFLKTGEYATDEEEDEVGPVLPGSDLAIEVFELPENEDMFSPSDLDTTKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKTQLQQNIEENKERMLKLESYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEAERKKIEDLEKAHLVEVQGLQVRIRDLEAEVFRLLKQNGTQVNNNNNIFERRTSLGEVSKGDSIENLDVKQTSCHDGLSQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPSRTRLYDSVSSTDGEDSLERKNFTFTDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSQYPNRAVHEWSVQQVSHWLMSLNLEQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRAVVKKKLKEMKVSLEKARKAQEKMEKQREKLRRKEQEQMQRKSKKTERMAAATEGAGEQ", "length": 1119, "header": "tr|A0A287A9Q2-1|A0A287A9Q2_PIG Computationally mapped isoform of Neurabin-1 OS=Sus scrofa OX=9823 GN=PPP1R9A PE=1 SV=2 CANONICAL=A0A286ZJP9-1" }, "locus": { "chromosome": "9", "start_pos": 74938071, "end_pos": 74637880, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058476.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058476.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040730.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040730.2" } ] } }, { "isoform_ac": "A0A287B2F8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9/entry#A0A287B2F8-1", "sequence": { "sequence": "MLKTESSGERTTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKAKEGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPSENAAVIAKTRGKGGPSSPQRRMKPKEFLEKTDGSVVKLESSVSERISRFDTMYDGPSYSKFTETRKMFERSVHESGQNNRYSPKKEKAGGGEPPEEWGGSKSNRGSTDSLDSLSSRTEAVSPTVSQLSAVFENTDSPGAIISEKTENNEYSVTGHYPLNLPSVTVTNLDTFGHLKDSNSWSPPSKHSDDAEDAEKSNVIPVLEVASKSTSLASVPSEEAEQNKEAEDSTSNQESSDRIDRDFPEEPCAENKAVPESEIPSPQNEPSEDAEANLVGSEAAMQQKKDLAGGDFTSAVVSRFACGKELLEDSHHFGSSHVYMHSDYNVYRVRSRYNSDWGETGTEQDEQEDSDENSYYQPDLEYSEIVGLPEEEDIPANRKIKFSSAPIKVFSTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLEQHYAQYDADDDENTVAELQGVSGNCNNNNNYFLKTGEYATDEEEDEVGPVLPGSDLAIEVFELPENEDMFSPSDLDTTKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKTQLQQNIEENKERMLKLESYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEAERKKIEDLEKAHLVEVQGLQVRIRDLEAEVFRLLKQNGTQVNNNNNIFERRTSLGEVSKGDSIENLDVKQTSCHDGLSQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPSRTRLYDSVSSTDGEDSLERKPSNSFYNHMHITKSLLPKGLRTSPESDSGAPSLTPVAGSVPFSSDHIAELQEGPLHLEREPSSSPGGGTSLSSPSKSEHDNEESLCHHQATTKKILQEKDGATGPRSLRASSSLVVRGGKIKRKFVDLGAPLRRSSNKGKKWKEKEKEANRFSPGGRIFRSRLEPWKPKPASMCSTGLPFSWFNESRKGSYSFRNLPSPKSPLQPSPETLISDKKGSKNFTFTDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSQYPNRAVHEWSVQQVSHWLMSLNLEQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRAVVKKKLKEMKVSLEKARKAQEKMEKQREKLRRKEQEQMQRKSKKTERMAAATEGAGEQ", "length": 1337, "header": "tr|A0A287B2F8-1|A0A287B2F8_PIG Computationally mapped isoform of Neurabin-1 OS=Sus scrofa OX=9823 GN=PPP1R9A PE=1 SV=1 CANONICAL=A0A286ZJP9-1" }, "locus": { "chromosome": "9", "start_pos": 74938071, "end_pos": 74637880, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037238.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037238.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050591.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050591.1" } ] } }, { "isoform_ac": "F1SFA4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9/entry#F1SFA4-1", "sequence": { "sequence": "MLKTESSGERTTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKAKEGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPSENAAVIAKTRGKGGPSSPQRRMKPKEFLEKTDGSVVKLESSVSERISRFDTMYDGPSYSKFTETRKMFERSVHESGQNNRYSPKKEKAGGGEPPEEWGGSKSNRGSTDSLDSLSSRTEAVSPTVSQLSAVFENTDSPGAIISEKTENNEYSVTGHYPLNLPSVTVTNLDTFGHLKDSNSWSPPSKHSDDAEDAEKSNVIPVLEVASKSTSLASVPSEEAEQNKEAEDSTSNQESSDRIDRDFPEEPCAENKAVPESEIPSPQNEPSEDAEANLVGSEAAMQQKKDLAGGDFTSAVVSRFACGKELLEDSHHFGSSHVYMHSDYNVYRVRSRYNSDWGETGTEQDEQEDSDENSYYQPDLEYSEIVGLPEEEDIPANRKIKFSSAPIKVFSTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLEQHYAQYDADDDETGEYATDEEEDEVGPVLPGSDLAIEVFELPENEDMFSPSDLDTTKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKTQLQQNIEENKERMLKLESYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEAERKKIEDLEKAHLVEVQGLQVRIRDLEAEVFRLLKQNGTQVNNNNNIFERRTSLGEVSKGDSIENLDVKQTSCHDGLSQDFNEAVPETERLDSKALKTRAQLSVKNRRQRPSRTRLYDSVSSTDGEDSLERKPSNSFYNHMHITKSLLPKGLRTSPESDSGAPSLTPVAGSVPFSSDHIAELQEGPLHLEREPSSSPGGGTSLSSPSKSEHDNEESLCHHQATTKKILQEKDGATGPRSLRASSSLVVRGGKIKRKFVDLGAPLRRSSNKGKKWKEKEKEANRFSPGGRIFRSRLEPWKPKPASMCSTGLPFSWFNESRKGSYSFRNLPSPKSPLQPSPETLISDKKGSKNFTFTDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSQYPNRAVHEWSVQQVSHWLMSLNLEQYVSEFSAQNITGEQLLQLDGNKLKALGMTSSQDRAVVKKKLKEMKVSLEKARKAQEKMEKQREKLRRKEQEQMQRKSKKTERMAAATEGAGEQ", "length": 1315, "header": "tr|F1SFA4-1|A0A286ZJP9_PIG Computationally mapped isoform of Neurabin-1 OS=Sus scrofa OX=9823 GN=PPP1R9A PE=1 SV=4 CANONICAL=A0A286ZJP9-1" }, "locus": { "chromosome": "9", "start_pos": 74938071, "end_pos": 74637880, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016702.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016702.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016256.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016256.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 201, "start_aa": "Thr", "end_pos": 201, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr201", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFA4", "url": "https://www.uniprot.org/uniprotkb/F1SFA4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "O35867-1", "protein_name": "Neurabin-1", "gene_name": "Ppp1r9a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKAESSGERTTLRSASPHRNAYRTEFQALKSTFDKPKPDGEQKTKEGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAIIAKTRGKGRPSSPQKRMKPKEFVEKTDGSVVKLESSVSERISRFDTMHDGPSYAKFTETRKMFERSGHESGQNNRHSPKKEKAGEAEPQDEWGGSKSNRGSSDSLDSLSPRTEAVSPTVSQLSAVFENSESPGAITPGKAENSNYSVTGHYPLNLPSVTVTNLDTFGRLKDSNSRPSSNKQATDTEEPEKSEAVPVPEVAQKGTSLASLPSEERQLSTEAEDVTAQPDTPDSTDKDSPGEPSAESQAMPKSNTLSRPKEPLEDAEANVVGSEAEQPQRRDLTGGGDLTSPDASASSCGKEVPEDSNSFEGSHVYMHSDYNVYRVRSRYNSDWGETGTEQDEGDDSDENNYYQPDMEYSEIVGLPQEEEIPANRKIKFSCAPIKVFNTYSNEDYDRRNDDVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLERHYAQYDADDDETGEYATDEEEDEVGPILPGGDMAIEVFELPENEDMFSPSDLDTSKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKNQLQQNIEENKERMVKLESYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIRRQEVERKKLEEVEKAHLVEVQGLQVRIRDLEAEVFRLLKQNGTQVNNNNNIFERRPSPGEVSKGDTMENVEVKQTSCQDGLSQDLNEAVPETERLDSKALKTRAQLSVKNRRQRPTRTRLYDSVSSTDGEDSLERKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHTQSQSRAVHEWSVQQVSHWLVGLSLDQYVSEFSAQNISGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMSLEKARKAQEKMEKQREKLRRKEQEQMQRKSKKSEKMTSTTEQP", "length": 1095 }, "evidence": [ { "id": "A0A286ZJP9", "url": "https://omabrowser.org/oma/group/A0A286ZJP9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ULJ8-1", "protein_name": "Neurabin-1", "gene_name": "PPP1R9A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLKTESSGERTTLRSASPHRNAYRTEFQALKSTFDKPKSDGEQKTKEGEGSQQSRGRKYGSNVNRIKNLFMQMGMEPNENAAVIAKTRGKGGHSSPQRRMKPKEFLEKTDGSVVKLESSVSERISRFDTMYDGPSYSKFTETRKMFERSVHESGQNNRYSPKKEKAGGSEPQDEWGGSKSNRGSTDSLDSLSSRTEAVSPTVSQLSAVFENTDSPSAIISEKAENNEYSVTGHYPLNLPSVTVTNLDTFGHLKDSNSWPPSNKRGVDTEDAHKSNATPVPEVASKSTSLASIPGEEIQQSKEPEDSTSNQQTPDSIDKDGPEEPCAESKAMPKSEIPSPQSQLLEDAEANLVGREAAKQQRKELAGGDFTSPDASASSCGKEVPEDSNNFDGSHVYMHSDYNVYRVRSRYNSDWGETGTEQDEEEDSDENSYYQPDMEYSEIVGLPEEEEIPANRKIKFSSAPIKVFNTYSNEDYDRRNDEVDPVAASAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPGQVSEVAQLISQTLEQERRQRELLEQHYAQYDADDDETGEYATDEEEDEVGPVLPGSDMAIEVFELPENEDMFSPSELDTSKLSHKFKELQIKHAVTEAEIQKLKTKLQAAENEKVRWELEKTQLQQNIEENKERMLKLESYWIEAQTLCHTVNEHLKETQSQYQALEKKYNKAKKLIKDFQQKELDFIKRQEAERKKIEDLEKAHLVEVQGLQVRIRDLEAEVFRLLKQNGTQVNNNNNIFERRTSLGEVSKGDTMENLDGKQTSCQDGLSQDLNEAVPETERLDSKALKTRAQLSVKNRRQRPSRTRLYDSVSSTDGEDSLERKNFTFNDDFSPSSTSSADLSGLGAEPKTPGLSQSLALSSDESLDMIDDEILDDGQSPKHSQCQNRAVQEWSVQQVSHWLMSLNLEQYVSEFSAQNITGEQLLQLDGNKLKALGMTASQDRAVVKKKLKEMKMSLEKARKAQEKMEKQREKLRRKEQEQMQRKSKKTEKMTSTTAEGAGEQ", "length": 1098 }, "evidence": [ { "id": "A0A286ZJP9", "url": "https://omabrowser.org/oma/group/A0A286ZJP9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "plasma membrane bounded cell projection", "id": "GO:0120025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120025", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZJP9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJP9" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": 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"database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1RXC8", "url": "https://www.orthodb.org/?gene=F1RXC8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21656", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21656", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21656:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21656:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15275", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15275", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16801", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16801", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3214847", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3214847", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005653965", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653965", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZQ98", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQ98-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ98-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBN2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBN2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBN2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBN2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RXC8", "url": "https://www.uniprot.org/uniprotkb/F1RXC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RXC8-1", "url": "https://www.uniprot.org/uniprotkb/F1RXC8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTMRSAVFKAAAAPAGGNPEQRLDYERAAALGGPEDEPGAAEAHFLPRHRKLKEPGPPLASSQGGSPAPSPAGCGGKGRGLLLPAGAAPGQQEESWGGSVPLPCPPPATKQAGIGGEPAAAGAGCSPRPKYQAVLPIQTGSLVAAAKEPTPWAGDKGGAAPPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGRWKSMRKSPLGGGGGSGASSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEELKSERDTLLARIERMERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKIPVKKLAPEFSKVKTKTPKHSPVKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVAIPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK", "length": 598, "header": "tr|A0A286ZQ98-1|A0A286ZQ98_PIG Isoform 1 of Male-specific lethal 1 homolog OS=Sus scrofa OX=9823 GN=MSL1 PE=3 SV=1 CANONICAL=A0A286ZQ98-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQ98-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ98/entry#A0A286ZQ98-1", "sequence": { "sequence": "MTMRSAVFKAAAAPAGGNPEQRLDYERAAALGGPEDEPGAAEAHFLPRHRKLKEPGPPLASSQGGSPAPSPAGCGGKGRGLLLPAGAAPGQQEESWGGSVPLPCPPPATKQAGIGGEPAAAGAGCSPRPKYQAVLPIQTGSLVAAAKEPTPWAGDKGGAAPPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGRWKSMRKSPLGGGGGSGASSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEELKSERDTLLARIERMERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKIPVKKLAPEFSKVKTKTPKHSPVKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVAIPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK", "length": 598, "header": "tr|A0A286ZQ98-1|A0A286ZQ98_PIG Isoform 1 of Male-specific lethal 1 homolog OS=Sus scrofa OX=9823 GN=MSL1 PE=3 SV=1 CANONICAL=A0A286ZQ98-1" }, "locus": { "chromosome": "12", "start_pos": 22236943, "end_pos": 22227125, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065296.2", "url": "https://www.ensembl.org/id/ENSSSCT00000065296.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033781.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033781.1" } ] } }, { "isoform_ac": "A0A5G2RBN2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ98/entry#A0A5G2RBN2-1", "sequence": { "sequence": "MERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKIPVKKLAPEFSKVKTKTPKHSPVKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK", "length": 351, "header": "tr|A0A5G2RBN2-1|A0A286ZQ98_PIG Computationally mapped isoform of Male-specific lethal 1 homolog OS=Sus scrofa OX=9823 GN=MSL1 PE=3 SV=1 CANONICAL=A0A286ZQ98-1" }, "locus": { "chromosome": "12", "start_pos": 22233633, "end_pos": 22227125, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069296.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069296.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073750.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073750.1" } ] } }, { "isoform_ac": "F1RXC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQ98/entry#F1RXC8-1", "sequence": { "sequence": "MTMRSAVFKAAAAPAGGNPEQRLDYERAAALGGPEDEPGAAEAHFLPRHRKLKEPGPPLASSQGGSPAPSPAGCGGKGRGLLLPAGAAPGQQEESWGGSVPLPCPPPATKQAGIGGEPAAAGAGCSPRPKYQAVLPIQTGSLVAAAKEPTPWAGDKGGAAPPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGRWKSMRKSPLGGGGGSGASSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEELKSERDTLLARIERMERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKIPVKKLAPEFSKVKTKTPKHSPVKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK", "length": 614, "header": "tr|F1RXC8-1|F1RXC8_PIG Computationally mapped isoform of Male-specific lethal 1 homolog OS=Sus scrofa OX=9823 GN=MSL1 PE=3 SV=1 CANONICAL=A0A286ZQ98-1" }, "locus": { "chromosome": "12", "start_pos": 22236943, "end_pos": 22227125, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019027.4", "url": "https://www.ensembl.org/id/ENSSSCT00000019027.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018522.2", "url": "https://www.ensembl.org/id/ENSSSCP00000018522.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RBN2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBN2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524896", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524896", "resource": "KEGG Pathway" }, { "id": "R-SSC-3214847", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3214847", "resource": "Reactome", "description": "HATs acetylate histones" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1N7Z0-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTMRSAVFKAAAAPAGGNPEQRLDYERAAALGGPEDEPGAAEAHFLPRHRKLKEPGPPLASSQGGSPAPSPAGCGGKGRGLLLPAGAAPGQQEESWGGSVPLPCPPPATKQAGIGGEPAAAGAGCSPRPKYQAVLPIQTGSLVAAAKEPTPWAGDKGGAAPPAATASDPAGPPPLPLPGPPPLAPTAAAGTLAASEGRWKSMRKSPLGGGGGSGASSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEELKSERDTLLARIERMERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETPQTLPPKPFSCGRSGKGHKRKSPFGSTERKIPVKKLAPEFSKVKTKTPKHSPVKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSIHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVAIPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK", "length": 598 }, "evidence": [ { "id": "A0A286ZQ98", "url": "https://omabrowser.org/oma/group/A0A286ZQ98/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZBD0-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "Msl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTMRSAVFKAAAAPAGGNPEQRLDYERAAALGGPEDESGAAETHFLPRHRKLKEPGPPLASTQGGSPAPSPAGCGGGKGRGLLLPAGAAPGQQEESWGGSVPLPCPPPATKQAGIGGEPVAAGAGCSPRPKYQAVLPIQTGSLVAAAKEPTPWAGDKGGAAPPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGRWKSIRKSPLGGGGGSGASSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEELKSERDTLLARIERMERRMQLVKRDNEKERHKLFQGYEPEEREETELSEKIKLERQPELCETSQALPSKPFSCGRSGKGHKRKTPFGNTERKTPVKKLAPEFSKFKTKTPKHSPIKEEPCGSISETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEQAFSSEMEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVAIPSWRDHSVEPLRDPNPSDILENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK", "length": 599 }, "evidence": [ { "id": "A0A286ZQ98", "url": "https://omabrowser.org/oma/group/A0A286ZQ98/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTMRSAVFKAAAAPAGGNPEQRLDYERAAALGGPEDEPGAAEAHFLPRHRKLKEPGPPLASSQGGSPAPSPAGCGGKGRGLLLPAGAAPGQQEESWGGSVPLPCPPPATKQAGIGGEPAAAGAGCSPRPKYQAVLPIQTGSLVAAAKEPTPWAGDKGGAASPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGRWKSMRKSPLGGGGGSGASSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEELKSERDTLLARIERMERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK", "length": 614 }, "evidence": [ { "id": "A0A286ZQ98", "url": "https://omabrowser.org/oma/group/A0A286ZQ98/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6PDM1-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "Msl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/A0A5G2QZ53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2REG3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2REG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REG3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFX6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFX6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FD85", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FD85-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FD85-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGF6", "url": "https://www.uniprot.org/uniprotkb/F1SGF6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGF6-1", "url": "https://www.uniprot.org/uniprotkb/F1SGF6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFSGLKDADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1225, "header": "tr|A0A286ZKF9-1|A0A286ZKF9_PIG Isoform 1 of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=2 CANONICAL=A0A286ZKF9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIE7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A286ZIE7-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAASGARLSPSRTSEGSGGGAGLGSGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGVGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNSQQMHVYLSGLPPNTDPEGSKTPSPSEPEAKKDTKKESKKRKNPKTQANTEPKRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVNNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1345, "header": "tr|A0A286ZIE7-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=1 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044538.2", "url": "https://www.ensembl.org/id/ENSSSCT00000044538.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031326.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031326.1" } ] } }, { "isoform_ac": "A0A286ZKF9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A286ZKF9-1", "sequence": { "sequence": "MRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFSGLKDADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1225, "header": "tr|A0A286ZKF9-1|A0A286ZKF9_PIG Isoform 1 of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=2 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481304, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066159.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066159.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032047.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032047.2" } ] } }, { "isoform_ac": "A0A5G2Q7F2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A5G2Q7F2-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAAPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEGKREMDPSRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVNNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1275, "header": "tr|A0A5G2Q7F2-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=2 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083643.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083643.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060004.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060004.2" } ] } }, { "isoform_ac": "A0A5G2QMH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A5G2QMH3-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAASGARLSPSRTSEGSGGGAGLGSGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGVGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEGKSSSLSPLCLLFFCQISKAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVNNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1275, "header": "tr|A0A5G2QMH3-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=2 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072066.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072066.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063307.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063307.2" } ] } }, { "isoform_ac": "A0A5G2QNY9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A5G2QNY9-1", "sequence": { "sequence": "RSPRSTNKHVSVGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVSKEISFSCSPVSLQKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1276, "header": "tr|A0A5G2QNY9-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=2 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44482164, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090325.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090325.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066415.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066415.2" } ] } }, { "isoform_ac": "A0A5G2QZ53-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A5G2QZ53-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAASGARLSPSRTSEGSGGGAGLGSGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGVGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEPHVDKGEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1354, "header": "tr|A0A5G2QZ53-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=1 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090432.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090432.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069423.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069423.1" } ] } }, { "isoform_ac": "A0A5G2REG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A5G2REG3-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAASGARLSPSRTSEGSGGGAGLGSGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGVGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEGKKREMYEHPVFCLASQVMDLTIQNQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1370, "header": "tr|A0A5G2REG3-1|A0A5G2REG3_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=1 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087138.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087138.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069257.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069257.1" } ] } }, { "isoform_ac": "A0A5G2RFX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A5G2RFX6-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAASGARLSPSRTSEGSGGGAGLGSGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGVGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEGKKREMYEHPVFCLASQVMDLTIQNVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1364, "header": "tr|A0A5G2RFX6-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=1 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084411.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084411.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073797.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073797.1" } ] } }, { "isoform_ac": "A0A8W4FD85-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#A0A8W4FD85-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAAPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVSKEISFSCSPVSLQKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1285, "header": "tr|A0A8W4FD85-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=1 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103041.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103041.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077282.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077282.1" } ] } }, { "isoform_ac": "F1SGF6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9/entry#F1SGF6-1", "sequence": { "sequence": "MLDPSSSEEESDEIVEEESGKEVLGSAASGARLSPSRTSEGSGGGAGLGSGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGVGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDHNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVNNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1254, "header": "tr|F1SGF6-1|A0A286ZKF9_PIG Computationally mapped isoform of Calcium dependent secretion activator OS=Sus scrofa OX=9823 GN=CADPS PE=1 SV=4 CANONICAL=A0A286ZKF9-1" }, "locus": { "chromosome": "13", "start_pos": 44481682, "end_pos": 43980738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012572.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012572.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012243.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012243.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7F2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7F2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q62717-1", "protein_name": "Calcium-dependent secretion activator 1", "gene_name": "Cadps", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLDPSSSEEESDEILEEESGKEVLGSAASGARLSPSRTNEGSAGSAGMGGSGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRPRKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVLLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLKPRAETCLSMDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDYNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVNNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEERTASVSEGGGLQGISMKDSDEEDEEDD", "length": 1289 }, "evidence": [ { "id": "A0A286ZKF9", "url": "https://omabrowser.org/oma/group/A0A286ZKF9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80TJ1-1", "protein_name": "Calcium-dependent secretion activator 1", "gene_name": "Cadps", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLDPSSSEEESDEILEEERGKDVLGSAASGARLSPSRTSEGSAGSAGMGGSGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVLLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFSGLKDADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEPHVDKGEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDYNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVNIPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNIICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD", "length": 1355 }, "evidence": [ { "id": "A0A286ZKF9", "url": "https://omabrowser.org/oma/group/A0A286ZKF9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NHE5-2", "protein_name": "Calcium-dependent secretion activator", "gene_name": "Cadps", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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"url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKF9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9" } ], "pmid": "" }, { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKF9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9" } ], "pmid": "" }, { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZKF9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKF9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasmic vesicle membrane", "id": "GO:0030659", "url": 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"Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5099900", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5099900", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5140745", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5140745", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8856825", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856825", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8856828", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856828", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8866427", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8866427", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8964038", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8964038", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013420", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013420", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013424", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013424", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R4Y7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4Y7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4Y7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4Y7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1U8P1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1U8P1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1U8P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1U8P1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAA6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAA6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAA6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAA6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMX9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMX9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMX9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMX9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGD4", "url": "https://www.uniprot.org/uniprotkb/I3LGD4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGD4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKGIKKDSGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM", "length": 1680, "header": "tr|I3LGD4-1|I3LGD4_PIG Isoform 1 of Clathrin heavy chain OS=Sus scrofa OX=9823 GN=CLTC PE=1 SV=4 CANONICAL=I3LGD4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R4Y7-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD4/entry#A0A5G2R4Y7-1", "sequence": { "sequence": "MHEYQVFLIHFVIRFINFFSLFPQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVMAPLRTYYLECCSPSPGTFWLWLYCTTLWAATAWLWVQHVRREADPVVAYFQTETSSLPASQFLIGENRHMFL", "length": 1693, "header": "tr|A0A5G2R4Y7-1|A0A5G2R4Y7_PIG Computationally mapped isoform of Clathrin heavy chain OS=Sus scrofa OX=9823 GN=CLTC PE=1 SV=2 CANONICAL=I3LGD4-1" }, "locus": { "chromosome": "12", "start_pos": 35917964, "end_pos": 35870429, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069841.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069841.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065629.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065629.2" } ] } }, { "isoform_ac": "A0A5K1U8P1-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD4/entry#A0A5K1U8P1-1", "sequence": { "sequence": "MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGNLSL", "length": 1639, "header": "tr|A0A5K1U8P1-1|A0A5K1U8P1_PIG Computationally mapped isoform of Clathrin heavy chain OS=Sus scrofa OX=9823 GN=CLTC PE=1 SV=2 CANONICAL=I3LGD4-1" }, "locus": { "chromosome": "12", "start_pos": 35915437, "end_pos": 35849381, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000033168.4", "url": "https://www.ensembl.org/id/ENSSSCT00000033168.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000030190.4", "url": "https://www.ensembl.org/id/ENSSSCP00000030190.4" } ] } }, { "isoform_ac": "A0A8W4FAA6-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD4/entry#A0A8W4FAA6-1", "sequence": { "sequence": "MGALFGKLKGLNDVGAWMERTRVWVHRGARPGLDLKLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM", "length": 1697, "header": "tr|A0A8W4FAA6-1|I3LGD4_PIG Computationally mapped isoform of Clathrin heavy chain OS=Sus scrofa OX=9823 GN=CLTC PE=1 SV=1 CANONICAL=I3LGD4-1" }, "locus": { "chromosome": "12", "start_pos": 35917863, "end_pos": 35849550, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092669.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092669.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076259.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076259.1" } ] } }, { "isoform_ac": "A0A8W4FMX9-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD4/entry#A0A8W4FMX9-1", "sequence": { "sequence": "MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM", "length": 612, "header": "tr|A0A8W4FMX9-1|A0A8W4FMX9_PIG Computationally mapped isoform of Clathrin heavy chain OS=Sus scrofa OX=9823 GN=CLTC PE=1 SV=1 CANONICAL=I3LGD4-1" }, "locus": { "chromosome": "12", "start_pos": 35917863, "end_pos": 35849381, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105204.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105204.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080253.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080253.1" } ] } }, { "isoform_ac": "I3LGD4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD4/entry#I3LGD4-1", "sequence": { "sequence": 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[ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC98-1", "uniprot_ac": "I3LC98", "uniprot_id": "I3LC98_PIG", "mass": { "chemical_mass": 193942.0, "monoisotopic_mass": 193942.0 }, "refseq": {}, "gene_names": [ { "name": "KIF13A", "type": "recommended", "evidence": [ { "id": "I3LC98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ] } ], "protein_names": [ { "name": "Kinesin family member 13A", "type": "synonym", "evidence": [ { "id": "I3LC98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC98/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KIF13A", "url": "https://www.uniprot.org/uniprotkb/I3LC98", "locus": { "chromosome": "7", "start_pos": 13498222, "end_pos": 13716757, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000020858", "url": "https://www.ensembl.org/id/ENSSSCG00000020858" } ] } } ], "crossref": [ { "id": "ENSSSCG00000020858", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000020858", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01365", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01365", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22729", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22729", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008984", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008984", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019821", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019821", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022140", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022140", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032405", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032405", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR47117", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47117", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00225", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00225", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00498", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00498", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12423", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12423", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12473", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12473", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16183", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16183", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AWF7", "url": "https://www.uniprot.org/uniprotkb/A0A287AWF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AWF7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AWF7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L676", "url": "https://www.uniprot.org/uniprotkb/I3L676", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L676-1", "url": "https://www.uniprot.org/uniprotkb/I3L676-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC98-1", "url": "https://www.uniprot.org/uniprotkb/I3LC98-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFJ8", "url": "https://www.uniprot.org/uniprotkb/I3LFJ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFJ8-1", "url": "https://www.uniprot.org/uniprotkb/I3LFJ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LVQ0", "url": "https://www.uniprot.org/uniprotkb/I3LVQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LVQ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LVQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDTKVKVAVRVRPLNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQRGLIPRLCCALFQRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPEHCEIDIASDGEVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDVDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQLSPERQPQSSGPERLAFSSQTAQQKVTQWAEERDELFRQSLTKLREQLVKANTLVREANFLAEEMNKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVKIKEATGLPLSLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISEGALAIEVWGHRCTGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSISIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKTEDDVEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDEEVSATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALMAARSENEGTSDGETYIEKYTRGVLQVENILSLERLRQAVTVKEALSTKARQLRRSLSTPNVHNGWPESQLDMSDYSPSYQDVSCYGTLPRDSPRRSKEGCTSENPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRMSLEAKPLLSQEDSEEEENDLEALNRKLLSSQPYVPVEFADFSVYNASLESREWFSSKVDLTNSKVLEKDVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLALPAKDADASEHPGPSFVHDFRPSSNKELTELDRGLVKDKMTMVPLKENSALAKGSPSSQSTPEKNSTALCRTGSCSGQEACSGRKGPPARGFCPREVTVEHTTDILEDHSFTEFMGVSDGKDLDGLTAPSAGELSSSRTLPSPTDSKRAPFGPQDPGQPPSSAGNDQGRTATR", "length": 1733, "header": "tr|I3LC98-1|I3LC98_PIG Isoform 1 of Kinesin family member 13A OS=Sus scrofa OX=9823 GN=KIF13A PE=3 SV=4 CANONICAL=I3LC98-1" }, "isoforms": [ { "isoform_ac": "A0A287AWF7-1", "url": "https://www.uniprot.org/uniprotkb/I3LC98/entry#A0A287AWF7-1", "sequence": { "sequence": "MMGSAEQRGLIPRLCCALFQRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPEHCEIDIASDGEVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDVDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQLSPERQPQSSGPERLAFSSQTAQQKVTQWAEERDELFRQSLTKLREQLVKANTLVREANFLAEEMNKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVKIKEATGLPLSLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISEGALAIEVWGHRCTGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSISIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKTEDDVEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDEEVSATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALMAARSENEGTSDGETYIEKYTRGVLQVENILSLERLRQAITVKEALSTKARQLRRSLSTPNVHNVSSSRPDLSGFDDDDKGWPESQLDMSDYSPSYQDVSCYGTLPRDSPRRSKEGCTSENPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRMSLEAKPLLSQESMPPPQAHNPGCIVPSGSNGSSMPVEHNSKREKKIDSEEEENDLEALNRKLLSSQPYVPVEFADFSVYNASLESREWFSSKVDLTNSKVLEKDVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLALPAKDADASEHPGPSFVHDFRPSSNKELTELDRGLVKDKMTMVPLKENSALAKGSPSSQSTPEKNSTALCRTGSCSGQEACSGRKGPPARGFCPREVTVEHTTDILEDHSFTEFMGVSDGKDLDGLTAPSAGELSSSRTLPSPTDSKRAPFGPQDPGQPPSSAGNDQGRTATR", "length": 1673, "header": "tr|A0A287AWF7-1|A0A287AWF7_PIG Computationally mapped isoform of Kinesin family member 13A OS=Sus scrofa OX=9823 GN=KIF13A PE=3 SV=3 CANONICAL=I3LC98-1" }, "locus": { "chromosome": "7", "start_pos": 13587316, "end_pos": 13499881, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052972.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052972.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048464.3", "url": "https://www.ensembl.org/id/ENSSSCP00000048464.3" } ] } }, { "isoform_ac": "I3L676-1", "url": "https://www.uniprot.org/uniprotkb/I3LC98/entry#I3L676-1", "sequence": { "sequence": "MEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQRGLIPRLCCALFQRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPEHCEIDIASDGEVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDVDAASEASSEPDYNYEFAQMEVIMKTLNSNGGFPIISLSAWWSSPWWSYLKILFPLLWFQTKLLHKHWDKDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQLSPERQPQSSGPERLAFSSQTAQQKVTQWAEERDELFRQSLTKLREQLVKANTLVREANFLAEEMNKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVKIKEATGLPLSLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISEGALAIEVWGHRCTGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSISIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKTEDDVEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDEEVSATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALMAARSENEGTSDGETYIEKYTRGVLQVENILSLERLRQAITVKEALSTKARQLRRSLSTPNVHNVSSSRPDLSGFDDDDKGWPESQLDMSDYSPSYQDVSCYGTLPRDSPRRSKEGCTSENPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRMSLEAKPLLSQEDSEEEENDLEALNRKLLSSQPYVPVEFADFSVYNASLESREWFSSKVDLTNSKVLEKDVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLALPAKDADASEHPGPSFVHDFRPSSNKELTELDRGLVKDKMTMVPLKENSALAKGSPSSQSTPEKNSTALCRTGSCSGQEACSGRKGPPARGFCPREVTVEHTTDILEDHSFTEFMGVSDGKDLDGLTAPSAGELSSSRTLPSPTDSKRAPFGPQDPGQPPSSAGNDQGRTATR", "length": 1773, "header": "tr|I3L676-1|I3L676_PIG Computationally mapped isoform of Kinesin family member 13A OS=Sus scrofa OX=9823 GN=KIF13A PE=3 SV=4 CANONICAL=I3LC98-1" }, "locus": { "chromosome": "7", "start_pos": 13716310, "end_pos": 13499881, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023668.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023668.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019527.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019527.4" } ] } }, { "isoform_ac": "I3LC98-1", "url": "https://www.uniprot.org/uniprotkb/I3LC98/entry#I3LC98-1", "sequence": { "sequence": "MSDTKVKVAVRVRPLNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQRGLIPRLCCALFQRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPEHCEIDIASDGEVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDVDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQLSPERQPQSSGPERLAFSSQTAQQKVTQWAEERDELFRQSLTKLREQLVKANTLVREANFLAEEMNKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVKIKEATGLPLSLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISEGALAIEVWGHRCTGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSISIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKTEDDVEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDEEVSATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALMAARSENEGTSDGETYIEKYTRGVLQVENILSLERLRQAVTVKEALSTKARQLRRSLSTPNVHNGWPESQLDMSDYSPSYQDVSCYGTLPRDSPRRSKEGCTSENPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRMSLEAKPLLSQEDSEEEENDLEALNRKLLSSQPYVPVEFADFSVYNASLESREWFSSKVDLTNSKVLEKDVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLALPAKDADASEHPGPSFVHDFRPSSNKELTELDRGLVKDKMTMVPLKENSALAKGSPSSQSTPEKNSTALCRTGSCSGQEACSGRKGPPARGFCPREVTVEHTTDILEDHSFTEFMGVSDGKDLDGLTAPSAGELSSSRTLPSPTDSKRAPFGPQDPGQPPSSAGNDQGRTATR", "length": 1733, "header": "tr|I3LC98-1|I3LC98_PIG Isoform 1 of Kinesin family member 13A OS=Sus scrofa OX=9823 GN=KIF13A PE=3 SV=4 CANONICAL=I3LC98-1" }, "locus": { "chromosome": "7", "start_pos": 13716675, "end_pos": 13499881, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029912.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029912.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021672.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021672.4" } ] } }, { "isoform_ac": "I3LFJ8-1", "url": "https://www.uniprot.org/uniprotkb/I3LC98/entry#I3LFJ8-1", "sequence": { "sequence": "MSDTKVKVAVRVRPLNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQRGLIPRLCCALFQRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPEHCEIDIASDGEVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDVDAASEASSEPDYNYEFAQMEVIMKTLNSNGGFPIISLSAWWSSPWWSYLKILFPLLWFQTKLLHKHWDKDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQLSPERQPQSSGPERLAFSSQTAQQKVTQWAEERDELFRQSLTKLREQLVKANTLVREANFLAEEMNKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVKIKEATGLPLSLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISEGALAIEVWGHRCTGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSISIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKTEDDVEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDEEVSATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALMAARSENEGTSDGETYIEKYTRGVLQVENILSLERLRQAITVKEALSTKARQLRRSLSTPNVHNVSSSRPDLSGFDDDDKGWPESQLDMSDYSPSYQDVSCYGTLPRDSPRRSKEGCTSENPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRMSLEAKPLLSQEILKLIYLEELHLLGDSEEEENDLEALNRKLLSSQPYVPVEFADFSVYNASLESREWFSSKVDLTNSKVLEKDVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLALPAKDADASEHPGPSFVHDFRPSSNKELTELDRGLVKDKMTMVPLKENSALAKGSPSSQSTPEKNSTALCRTGSCSGQEACSGRKGPPARGFCPREVTVEHTTDILEDHSFTEFMGVSDGKDLDGLTAPSAGELSSSRTLPSPTDSKRAPFGPQDPGQPPSSAGNDQGRTATR", "length": 1816, "header": "tr|I3LFJ8-1|I3LC98_PIG Computationally mapped isoform of Kinesin family member 13A OS=Sus scrofa OX=9823 GN=KIF13A PE=3 SV=3 CANONICAL=I3LC98-1" }, "locus": { "chromosome": "7", "start_pos": 13716675, "end_pos": 13499881, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029683.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029683.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022840.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022840.3" } ] } }, { "isoform_ac": "I3LVQ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LC98/entry#I3LVQ0-1", "sequence": { "sequence": "MSDTKVKVAVRVRPLNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGSAEQRGLIPRLCCALFQRISLEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPEHCEIDIASDGEVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDVDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQLSPERQPQSSGPERLAFSSQTAQQKVTQWAEERDELFRQSLTKLREQLVKANTLVREANFLAEEMNKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVKIKEATGLPLSLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISEGALAIEVWGHRCTGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSISIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKKEKTEDDVEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDEEVSATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALMAARSENEGTSDGETYIEKYTRGVLQVENILSLERLRQAITVKEALSTKARQLRRSLSTPNVHNVSSSRPDLSGFDDDDKGWPESQLDMSDYSPSYQDVSCYGTLPRDSPRRSKEGCTSENPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRMSLEAKPLLSQEILKLIYLEELHLLGDSEEEENDLEALNRKLLSSQPYVPVEFADFSVYNASLESREWFSSKVDLTNSKVLEKDVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLALPAKDADASEHPGPSFVHDFRPSSNKELTELDRGLVKDKMTMVPLKENSALAKGSPSSQSTPEKNSTALCRTGSCSGQEACSGRKGPPARGFCPREVTVEHTTDILEDHSFTEFMGVSDGKDLDGLTAPSAGELSSSRTLPSPTDSKRAPFGPQDPGQPPSSAGNDQGRTATR", "length": 1776, "header": "tr|I3LVQ0-1|I3LVQ0_PIG Computationally mapped isoform of Kinesin family member 13A OS=Sus scrofa OX=9823 GN=KIF13A PE=3 SV=3 CANONICAL=I3LC98-1" }, "locus": { "chromosome": "7", "start_pos": 13716675, "end_pos": 13499881, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023576.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023576.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028203.3", "url": "https://www.ensembl.org/id/ENSSSCP00000028203.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1704, "start_aa": "Thr", "end_pos": 1704, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1704", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFJ8", "url": "https://www.uniprot.org/uniprotkb/I3LFJ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "microtubule motor activity", "id": "GO:0003777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003777", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "kinesin complex", "id": "GO:0005871", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005871", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "microtubule-based movement", "id": "GO:0007018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007018", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "establishment of protein localization", "id": "GO:0045184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045184", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "endosome to lysosome transport", "id": "GO:0008333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008333", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "melanosome organization", "id": "GO:0032438", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032438", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "regulation of cytokinesis", "id": "GO:0032465", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032465", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" }, { "name": "vesicle cargo loading", "id": "GO:0035459", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035459", "evidence": [ { "database": "UniProtKB", "id": "I3LC98", "url": "https://www.uniprot.org/uniprotkb/I3LC98" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1497, "end_pos": 1499, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1542, "end_pos": 1544, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1625, "end_pos": 1627, "annotation": "n_glycosylation_sequon" }, { "start_pos": 204, "end_pos": 206, "annotation": "n_glycosylation_sequon" }, { "start_pos": 276, "end_pos": 278, "annotation": "n_glycosylation_sequon" }, { "start_pos": 33, "end_pos": 35, "annotation": "n_glycosylation_sequon" }, { "start_pos": 515, "end_pos": 517, "annotation": "n_glycosylation_sequon" }, { "start_pos": 68, "end_pos": 70, "annotation": "n_glycosylation_sequon" }, { "start_pos": 715, "end_pos": 717, "annotation": "n_glycosylation_sequon" }, { "start_pos": 846, "end_pos": 848, "annotation": "n_glycosylation_sequon" }, { "start_pos": 935, "end_pos": 937, "annotation": "n_glycosylation_sequon" }, { "start_pos": 961, "end_pos": 963, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LC98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC98" }, { "id": "PS50067", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50067" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Kinesin motor", "eco_id": "ECO_0000259", "start_pos": 5, "end_pos": 352, "start_aa": "Lys", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1704 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 138, "end_pos": 140 }, { "start_pos": 1497, "end_pos": 1499 }, { "start_pos": 1542, "end_pos": 1544 }, { "start_pos": 1625, "end_pos": 1627 }, { "start_pos": 204, "end_pos": 206 }, { "start_pos": 276, "end_pos": 278 }, { "start_pos": 33, "end_pos": 35 }, { "start_pos": 515, "end_pos": 517 }, { "start_pos": 68, "end_pos": 70 }, { "start_pos": 715, "end_pos": 717 }, { "start_pos": 846, "end_pos": 848 }, { "start_pos": 935, "end_pos": 937 }, { "start_pos": 961, "end_pos": 963 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", 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}, { "id": "F1SJH0", "url": "https://www.uniprot.org/uniprotkb/F1SJH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJH0-1", "url": "https://www.uniprot.org/uniprotkb/F1SJH0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTVTKMSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDLLENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC", "length": 480, "header": "tr|A0A286ZS32-1|A0A286ZS32_PIG Isoform 1 of Coronin OS=Sus scrofa OX=9823 GN=CORO2B PE=1 SV=1 CANONICAL=A0A286ZS32-1" }, "isoforms": [ { "isoform_ac": "A0A286ZS32-1", "url": 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"ENSSSCP00000034458.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034458.1" } ] } }, { "isoform_ac": "A0A287AUL1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32/entry#A0A287AUL1-1", "sequence": { "sequence": "MLLGRWSALSHGPSPGPSQMSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDLLENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC", "length": 494, "header": "tr|A0A287AUL1-1|A0A287AUL1_PIG Computationally mapped isoform of Coronin OS=Sus scrofa OX=9823 GN=CORO2B PE=1 SV=3 CANONICAL=A0A286ZS32-1" }, "locus": { "chromosome": "1", "start_pos": 166606538, "end_pos": 166538514, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063026.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063026.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047799.3", "url": "https://www.ensembl.org/id/ENSSSCP00000047799.3" } ] } }, { "isoform_ac": "A0A5G2QEK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32/entry#A0A5G2QEK2-1", "sequence": { "sequence": "MLLGRWSALSHGPSPGPSQMSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDLLENVPPRTENEPGLFRGIFLSVTNTISSPLLASAASDPNK", "length": 480, "header": "tr|A0A5G2QEK2-1|A0A286ZS32_PIG Computationally mapped isoform of Coronin OS=Sus scrofa OX=9823 GN=CORO2B PE=1 SV=2 CANONICAL=A0A286ZS32-1" }, "locus": { "chromosome": "1", "start_pos": 166601670, "end_pos": 166538514, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078692.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078692.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062113.2", "url": "https://www.ensembl.org/id/ENSSSCP00000062113.2" } ] } }, { "isoform_ac": "A0A5G2QQX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32/entry#A0A5G2QQX6-1", "sequence": { "sequence": "MFSSPACAQACSSAPCGWATSAVNILSYRRLPTLPVPSVGTFPAVSNETTALIGHLCGARPRAHSPRDSQSGEGVAGLTLVSPGPSQMSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVSRTVASWGGWAHGSSSQVMGYRWGQPPVLIWNLDVGEPVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDLLENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC", "length": 540, "header": "tr|A0A5G2QQX6-1|A0A286ZS32_PIG Computationally mapped isoform of Coronin OS=Sus scrofa OX=9823 GN=CORO2B PE=1 SV=2 CANONICAL=A0A286ZS32-1" }, "locus": { "chromosome": "1", "start_pos": 166606538, "end_pos": 166510382, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069283.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069283.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066452.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066452.2" } ] } }, { "isoform_ac": "F1SJH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32/entry#F1SJH0-1", "sequence": { "sequence": "MFSSPACAQACSSAPCGWATSAVNILSYRRLPTLPVPSVGTFPAVSNETTALIGHLCGARPRAHSPRDSQSGEGGRIINMSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHSDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDLLENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC", "length": 554, "header": "tr|F1SJH0-1|A0A286ZS32_PIG Computationally mapped isoform of Coronin OS=Sus scrofa OX=9823 GN=CORO2B PE=1 SV=4 CANONICAL=A0A286ZS32-1" }, "locus": { "chromosome": "1", "start_pos": 166606538, "end_pos": 166510382, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005474.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005474.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005337.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005337.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 372, "start_aa": "Thr", "end_pos": 372, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr372", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJH0", "url": "https://www.uniprot.org/uniprotkb/F1SJH0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520530", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520530", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" }, { "name": "vinculin binding", "id": "GO:0017166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017166", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" }, { "name": "talin binding", "id": "GO:1990147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990147", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "focal adhesion", "id": "GO:0005925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005925", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" }, { "name": "actin filament", "id": "GO:0005884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005884", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" }, { "name": "focal adhesion assembly", "id": "GO:0048041", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048041", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS32", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 125, "end_pos": 127, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZS32-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 480, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZS32-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZS32" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZS32", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS32" }, { "id": "SM01166", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01166" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF1899", "eco_id": "ECO_0000259", "start_pos": 10, "end_pos": 74, "start_aa": "Pro", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 372 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 125, "end_pos": 127 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LG90-1", "uniprot_ac": "I3LG90", "uniprot_id": "I3LG90_PIG", "mass": { "chemical_mass": 74159.0, "monoisotopic_mass": 74159.0 }, "refseq": {}, "gene_names": [ { "name": "LMLN", "type": "recommended", "evidence": [ { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ] } ], "protein_names": [ { "name": "Leishmanolysin-like peptidase", "type": "recommended", "evidence": [ { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90/entry#names_and_taxonomy" } ] }, { "name": "3.4.24.-", "type": "synonym", "evidence": [ { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Metalloprotease.", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90#function" }, { "database": "UniProtKB", "id": "ARBA00002657", "url": "https://www.uniprot.org/uniprotkb/ARBA00002657#function" }, { "database": "UniProtKB", "id": "F1SQ72", "url": "https://www.uniprot.org/uniprotkb/F1SQ72#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LMLN", "url": "https://www.uniprot.org/uniprotkb/I3LG90", "locus": { "chromosome": "13", "start_pos": 134656744, "end_pos": 134596150, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011857", "url": "https://www.ensembl.org/id/ENSSSCG00000011857" } ] } } ], "crossref": [ { "id": "I3LG90", "url": "https://alphafold.ebi.ac.uk/entry/I3LG90", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011857", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011857", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514985", "url": "https://www.ncbi.nlm.nih.gov/gene/100514985", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001577", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001577", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514985", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514985", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MVRHHVH", "url": "https://omabrowser.org/oma/group/MVRHHVH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SQ72", "url": "https://www.orthodb.org/?gene=F1SQ72", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10942", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10942", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10942:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10942:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01457", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01457", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SQ72", "url": "https://www.uniprot.org/uniprotkb/F1SQ72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ72-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ72-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG90-1", "url": "https://www.uniprot.org/uniprotkb/I3LG90-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVTTLGLKMAAELGRGEGSRGPGRGPSQWHWSGSLWIRGVLLLLGGLRASATSIPVYLGNSPPCRHHVPSDSEVINKVHLKANHIVRRDVNEHLRIKTVYDKSIEELLPEKRYLVKNKLFPQAVSYLEKTFQVRRPAGTILLSRQCATNQYQYLRKENDHHRCCTEECAEHTKCGPVIVPEEHLQQCRVCCGGKWPCGAVGVPDQEGVRDADFVLYVGALATERCSHENIISYAAYCQQEAKMDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEIIHALGFSAGLFAFYHDKDGNPLTSRFADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKRVPHTVYLLVTPRVVDEARKHFNCPILEGMELENQGGMGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGRQVLSPYCDTLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGVPSEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRVLENQPDLFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPAINLTRALPLDLCSRSSSLVVTLWLLLGNLFPLLAGFLLCVWH", "length": 657, "header": "tr|I3LG90-1|I3LG90_PIG Isoform 1 of Leishmanolysin-like peptidase OS=Sus scrofa OX=9823 GN=LMLN PE=3 SV=3 CANONICAL=I3LG90-1" }, "isoforms": [ { "isoform_ac": "F1SQ72-1", "url": "https://www.uniprot.org/uniprotkb/I3LG90/entry#F1SQ72-1", "sequence": { "sequence": "MVTTLGLKMAAELGRGEGSRGPGRGPSQWHWSGSLWIRGVLLLLGGLRASATSIPVYLGNSPPCRHHVPSDSEVINKVHLKANHIVRRDVNEHLRIKTVYDKSIEELLPEKRYLVKNKLFPQAVSYLEKTFQVRRPAGTILLSRQCATNQYQYLRKENDHHRCCTEECAEHTKCGPVIVPEEHLQQCRVCCGGKWPCGAVGVPDQEGVRDADFVLYVGALATERCSHENIISYAAYCQQEAKMDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEIIHALGFSAGLFAFYHDKDGNPLTSRFADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKRVPHTVYLLVTPRVVDEARKHFNCPILEGMELENQGGMGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMAERLDWGRGMGCDFVRRSCKFWIDQQRQKRQVLSPYCDTLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGVPSEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRVLENQPDLFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPAINLTRALPLDLCSRSSSLVVTLWLLLGNLFPLLAGFLLCVWH", "length": 694, "header": "tr|F1SQ72-1|I3LG90_PIG Computationally mapped isoform of Leishmanolysin-like peptidase OS=Sus scrofa OX=9823 GN=LMLN PE=3 SV=3 CANONICAL=I3LG90-1" }, "locus": { "chromosome": "13", "start_pos": 134652968, "end_pos": 134596155, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012970.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012970.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012629.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012629.3" } ] } }, { "isoform_ac": "I3LG90-1", "url": "https://www.uniprot.org/uniprotkb/I3LG90/entry#I3LG90-1", "sequence": { "sequence": "MVTTLGLKMAAELGRGEGSRGPGRGPSQWHWSGSLWIRGVLLLLGGLRASATSIPVYLGNSPPCRHHVPSDSEVINKVHLKANHIVRRDVNEHLRIKTVYDKSIEELLPEKRYLVKNKLFPQAVSYLEKTFQVRRPAGTILLSRQCATNQYQYLRKENDHHRCCTEECAEHTKCGPVIVPEEHLQQCRVCCGGKWPCGAVGVPDQEGVRDADFVLYVGALATERCSHENIISYAAYCQQEAKMDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEIIHALGFSAGLFAFYHDKDGNPLTSRFADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKRVPHTVYLLVTPRVVDEARKHFNCPILEGMELENQGGMGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGRQVLSPYCDTLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGVPSEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRVLENQPDLFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPAINLTRALPLDLCSRSSSLVVTLWLLLGNLFPLLAGFLLCVWH", "length": 657, "header": "tr|I3LG90-1|I3LG90_PIG Isoform 1 of Leishmanolysin-like peptidase OS=Sus scrofa OX=9823 GN=LMLN PE=3 SV=3 CANONICAL=I3LG90-1" }, "locus": { "chromosome": "13", "start_pos": 134652968, "end_pos": 134596155, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023850.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023850.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023083.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023083.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQ72", "url": "https://www.uniprot.org/uniprotkb/F1SQ72" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514985", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514985", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZDK0-1", "protein_name": "Leishmanolysin-like peptidase", "gene_name": "LMLN", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAEPGGGCRGFLARPLLAALAALAAALLLGCGRAAGLSPSFSSSSCRHRVPGGGEVVYRVPLRESRVLKRSVDQHLRIKIIYDRSVEGLLPEKRHLIKNKLFPQAISYLEKTFQVRKSTGTILLSRQCATNQYLRRKADPHRYCRGACANHTRCGPVIVPEKHLQQCRVYNQNEQLSDVPDQEGVRDADFVLYVSALTTERCGHENIIAYAAYCQLEAEMDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEIIHALGFSAGLFAFYRDDDGKPLTARYADGLPPFNESLGLYQWSDKVVQKAVRLWDVRGGKMLRHAVYLLTTPRVVEEARKHFDCPILEGMELENQGGMGTELNHWEKRLLENEAMTGSHTQNRVFSRITLALMEDTGWYKANYSMAEKLDWGRNKGCDFVMKSCKFWIDQKKQKRQLISPYCDTLRSNPLQLTCRQDQRAVAVCNLQKFPKQLPQEYQYFDNLSGVPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEFQRSSDCRIIENQPDPTKNYGAEEYGPNSVCLIQKSAFVMEQCRRKLSYPDWGSGCYQVSCSPQGLHVWVKDTAYLCSRSGQVLTVSIQMNGWVHVGNLICPACWDFCDSCPPERDPPALNLSRAAAIDLCSCSSSLVVALWLLMANLIPLVTGLFLCA", "length": 670 }, "evidence": [ { "id": "I3LG90", "url": "https://omabrowser.org/oma/group/I3LG90/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0L177-1", "protein_name": "Leishmanolysin-like peptidase", "gene_name": "Lmln", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPANGEAAEGPPPVRGKGGRQRGGVALHGNDAGPKMAAAGSGVAGGPGPGPRGRWGGCLWVRGVLLVLGGLPAGAAAAPVSLGTSPPCRHHVLSDTEVINKVHLKTSHVTKRDADGHLRIKTIYDQSIEELLPEKRYLVKNKLFPQAISYLEKTFQVRRPAGRILLSRQCATNQYLRKENDPHRYCTGECAVHTKCGPVIVPEEHLQQCRVCREGKWPCGAVGVLDPEGVQDADFVLYVGALATERCSHENIISYAAYCQQEAKMDRPIAGYANLCPNMISTQPQEFIGMLSTVKHEIIHALGFSAGLFAFYHDQDGNPLTSRSADGLPPFNYSLGLYQWSDKVVRKVERLWNVRDNKIVRHTVYLLVTPRVVEEARKHFNCPVLEGMELENQGGMGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMAEKLDWGRGMGCEFVRKSCKFWIDQHRQKRQVPSPYCDTLRSNPLQLTCRQDQRAVAVCNLQRFPNPLPPEYQYFDELSGISAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRILENQPELFKNYGAEQYGPHSVCLLQKSAFVMEQCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVRIQMNGWIHNGNLLCPSCWDFCEQCPPETDPPAANLTRALPLVSCGWPNPQLHLQLRPSVNCPVPPSPLSLFAYLSVCNRDDVLG", "length": 726 }, "evidence": [ { "id": "I3LG90", "url": "https://omabrowser.org/oma/group/I3LG90/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1Q5N1-1", "protein_name": "Leishmanolysin-like peptidase", "gene_name": "lmln", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMASGWRQPRSVIGAALFFNTTIIIFISTGAQTHTCDHKVPLHTEVIHKVFLKPDRLTKRSTDQQLNIKIEYDSSLDGLDEAKSSLVKDKLLPQAIDYLQKAFRVRRQSGPILLSRQCATNQYLRKRDDPHRYCQGPCANVTKCGPVVVPEHHLQQCRVCSESGKSCGPVGPPDGEGVARADFVLYVSAMTTERCGQENIVAYAAYCQLESELDRPIAGYANLCPNMISTQPQEFEGMLSTVKHEIIHALGFSAGLFAFYHDDGGKPLTPRSASGLPAYNESLGLYQWSDKVIKRATRLWDIRGGQMVRHTVHLLATPRVVEEARRHFNCPILEGMELENQGGAGTELNHWEKRLLENEAMTGSHTQNRVFSRITLAIMEDTGWYRANYSMAENLQWGRGLGCDFVMKSCKFWIDQHRHKRPTLSPYCDSVRSAPLQLTCRQDQLAVAVCNLQKFSNALPAEYQYFDHIPGVPKEDLSAYGGAVEIADYCPFSQEFSWHVGGEYQRSSYCRIQENQPATWRNYGAEQYGPGSVCLYQKSAFVMEQCTKRMTYPDWGSGCYKVSCTAQGLLVWVQNETFLCVRTGQVISVSIRMNEWVYNGQLICPACSDFCSNCPLPHLIPPLNTTKSAPIDPCSRSSFLVVNLWQLLLTLTPLLIGFLLCGWD", "length": 664 }, "evidence": [ { "id": "I3LG90", "url": "https://omabrowser.org/oma/group/I3LG90/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8BMN4-1", "protein_name": "Leishmanolysin-like peptidase", "gene_name": "Lmln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGSGGAGGPGPGPRGRWGGCLWVRGVLLVLGGLPAGAGAAPVSLGTSPPCRHHVLSDTEVINKVHLKTNHVTKRDADGHLRIKTIYDQSIEELLPEKRYLVKNKLFPQAISYLEKTFQVRRPAGRILLSRQCATNQYLRKENDPHRYCTGECAVHTKCGPVIVPEEHLQQCRVCREGKWPCGAVGVLDPEGVRDADFVLYVGALATERCSHENIISYAAYCQQEAKMDRPIAGYANLCPNMISTQPQEFIGMLSTVKHEIIHALGFSAGLFAFYHDQDGNPLTSRSADGLPPFNYSLGLYQWSDKVVRKVERLWNVRDNKIVRHTVYLLVTPRVVEEARKHFNCPVLEGMELENQGGMGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMAEKLDWGRGLGCEFVRKSCKFWIDQHRQRRQVPSPYCDTLRSNPLQLTCRQDQRAVAVCNLQRFPNPLPPEYQYFDELTGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRILENQPELFKNYGAEQYGPHSVCLLQKSAFIMEQCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVRIQMNGWIHNGNLLCPSCWDFCEQCPPETDPPAANLTRALPLDLCSCSSSLVVTLWLLLGNLFPLLAGFLLCVWH", "length": 681 }, "evidence": [ { "id": "I3LG90", "url": "https://omabrowser.org/oma/group/I3LG90/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96KR4-1", "protein_name": "Leishmanolysin-like peptidase", "gene_name": "LMLN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGSSPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEEHLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEANMDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRFADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPVLEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGRQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLDLCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH", "length": 647 }, "evidence": [ { "id": "I3LG90", "url": "https://omabrowser.org/oma/group/I3LG90/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VH19-1", "protein_name": "Leishmanolysin-like peptidase", "gene_name": "Invadolysin", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAKTPPLRPHGNMAKFLAALGICSWLLVSATAHNCQHQHPKAHEVVHGVRIQLADSEDDSAGDPARHSVRRRSVAAEQPLRILLVYDESVYRLEEEKFNLINDTVLPEAVQFWEQALMVRETKGVIRLNRKCDSTQVYVKNGHTHCIDHCKATTMCGEVQVPDAHLDVCRVCNATGQNCRIDSNTQPGEGIENADFVFYVSARQTQRCFKGLTVAYAAHCQQEAALDRPIAGHANLCPESISTKPQELQTLISTVKHEILHALGFSVSLYAFFRDDDGKPRTPRKLDTGKPYLNEKLQIHQWSNETIRKVVRENWSVRGGHVNKVVDMMVTPRVIAEVRAHFNCNKLEGAELEDQGGEGTALTHWEKRILENEAMTGTHTQSPVFSRITLALMEDSGWYRANYSMATPLTWGKGLGCAFAMRSCKDWIQYNHARGRSIHPFCSKVKQDPLQTECTDDRNSVALCNLIRHEFELPKGYQNFDSLNHVKDGEEGFYGGSVSLADHCPYIQEFTWRSKNVIVRGSHCRFTENNPRPEKNFALESYGEGAKCFDHSESMWEERSCHQTREWQHWGSGCYKYDCFDGRLHILVGNYSYKCSFPGQKLSIRIAANGWLHKGAIMCPPCHELCGAQFAAQGKQCRPGEEPDPLNKYPRDNLACGAGSEKSRSVAIITAVLLLFGLRWGFS", "length": 683 }, "evidence": [ { "id": "I3LG90", "url": "https://omabrowser.org/oma/group/I3LG90/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" }, { "name": "peptidase activity", "id": "GO:0008233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008233", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" }, { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "I3LG90", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 310, "end_pos": 312, "annotation": "n_glycosylation_sequon" }, { "start_pos": 617, "end_pos": 619, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LG90-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 657, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LG90-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LG90" } ], "lectin_list": [], "domain_list": [], "binding_sites": [ { "evidence": [ { "id": "F1SQ72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ72#function" }, { "id": "F1SQ72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ72" }, { "id": "PIRSR601577-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR601577-2" }, { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90#function" }, { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "binding_site_uniprot": 274, "amino_acid": "His", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 274, "end_pos": 274, "start_aa": "His", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SQ72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ72#function" }, { "id": "F1SQ72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ72" }, { "id": "PIRSR601577-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR601577-2" }, { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90#function" }, { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "binding_site_uniprot": 278, "amino_acid": "His", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 278, "end_pos": 278, "start_aa": "His", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SQ72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ72#function" }, { "id": "F1SQ72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ72" }, { "id": "PIRSR601577-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR601577-2" }, { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90#function" }, { "id": "I3LG90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG90" } ], "binding_site_uniprot": 380, "amino_acid": "His", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 380, "end_pos": 380, "start_aa": "His", "end_aa": "His", "glycosite_overlap": "" } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 310, "end_pos": 312 }, { "start_pos": 617, "end_pos": 619 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LIN5-1", "uniprot_ac": "I3LIN5", "uniprot_id": "I3LIN5_PIG", "mass": { "chemical_mass": 55935.0, "monoisotopic_mass": 55935.0 }, "refseq": { "ac": "XP_020951820", "name": "ubiquitin carboxyl-terminal hydrolase 14 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951820" }, "gene_names": [ { "name": "USP14", "type": "recommended", "evidence": [ { "id": "I3LIN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ] }, { "name": "USP14", "type": "synonym", "evidence": [ { "id": "XP_020951820", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951820" } ] } ], "protein_names": [ { "name": "Ubiquitin carboxyl-terminal hydrolase", "type": "recommended", "evidence": [ { "id": "I3LIN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#names_and_taxonomy" } ] }, { "name": "3.4.19.12", "type": "synonym", "evidence": [ { "id": "I3LIN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin carboxyl-terminal hydrolase 14 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020951820", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951820" } ] } ], "function": [ { "annotation": "Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes.", "evidence": [ { "database": "UniProtKB", "id": "I3L945", "url": "https://www.uniprot.org/uniprotkb/I3L945#function" }, { "database": "UniProtKB", "id": "RU366025", "url": "https://www.uniprot.org/uniprotkb/RU366025#function" }, { "database": "UniProtKB", "id": "A0A8W4FIN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIN5#function" }, { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5#function" }, { "database": "UniProtKB", "id": "A0A4X1VNJ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNJ8#function" }, { "database": "UniProtKB", "id": "A0A4X1VQ07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ07#function" }, { "database": "UniProtKB", "id": "A0A5G2QIC3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "USP14", "url": "https://www.uniprot.org/uniprotkb/I3LIN5", "locus": { "chromosome": "6", "start_pos": 106087924, "end_pos": 106139379, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022559", "url": "https://www.ensembl.org/id/ENSSSCG00000022559" } ] } } ], "crossref": [ { "id": "ENSSSCG00000022559", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022559", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02657", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02657", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd16104", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16104", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625317", "url": "https://www.ncbi.nlm.nih.gov/gene/100625317", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001394", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001394", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018200", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018200", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019954", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019954", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028889", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028889", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044635", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044635", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FKSDAEY", "url": "https://omabrowser.org/oma/group/FKSDAEY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43982", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43982", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43982:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43982:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00443", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00443", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5689880", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9758274", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9758274", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020951820", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951820", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VNJ8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNJ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VNJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VNJ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VQ07", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VQ07-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ07-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIC3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIC3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIN5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIN5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIN5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIN5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L945", "url": "https://www.uniprot.org/uniprotkb/I3L945", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L945-1", "url": "https://www.uniprot.org/uniprotkb/I3L945-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIN5-1", "url": "https://www.uniprot.org/uniprotkb/I3LIN5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDTVKETDSSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPKASDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE", "length": 493, "header": "tr|I3LIN5-1|I3LIN5_PIG Isoform 1 of Ubiquitin carboxyl-terminal hydrolase OS=Sus scrofa OX=9823 GN=USP14 PE=1 SV=2 CANONICAL=I3LIN5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VNJ8-1", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#A0A4X1VNJ8-1", "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDTVKETDSSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE", "length": 450, "header": "tr|A0A4X1VNJ8-1|A0A4X1VNJ8_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase OS=Sus scrofa OX=9823 GN=USP14 PE=1 SV=1 CANONICAL=I3LIN5-1" }, "locus": { "chromosome": "6", "start_pos": 106139172, "end_pos": 106090929, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084736.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084736.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064703.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064703.1" } ] } }, { "isoform_ac": "A0A4X1VQ07-1", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#A0A4X1VQ07-1", "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDTVKETDSSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPKASDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE", "length": 482, "header": "tr|A0A4X1VQ07-1|A0A4X1VQ07_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase OS=Sus scrofa OX=9823 GN=USP14 PE=1 SV=1 CANONICAL=I3LIN5-1" }, "locus": { "chromosome": "6", "start_pos": 106139172, "end_pos": 106090929, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031626.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031626.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026835.2", "url": "https://www.ensembl.org/id/ENSSSCP00000026835.2" } ] } }, { "isoform_ac": "A0A5G2QIC3-1", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#A0A5G2QIC3-1", "sequence": { "sequence": "FPLKKNYGLFAVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQGSNPRPHGCWLDSEPSIVCWQISYLLLQSMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPKASDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE", "length": 472, "header": "tr|A0A5G2QIC3-1|A0A5G2QIC3_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase OS=Sus scrofa OX=9823 GN=USP14 PE=1 SV=2 CANONICAL=I3LIN5-1" }, "locus": { "chromosome": "6", "start_pos": 106135197, "end_pos": 106090929, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091600.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091600.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063641.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063641.2" } ] } }, { "isoform_ac": "A0A8W4FIN5-1", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#A0A8W4FIN5-1", "sequence": { "sequence": "MPFRITVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQGSNPRPHGCWLDSEPSIVCWQISYLLLQSMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE", "length": 422, "header": "tr|A0A8W4FIN5-1|I3LIN5_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase OS=Sus scrofa OX=9823 GN=USP14 PE=1 SV=2 CANONICAL=I3LIN5-1" }, "locus": { "chromosome": "6", "start_pos": 106134526, "end_pos": 106090929, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100189.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100189.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079309.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079309.1" } ] } }, { "isoform_ac": "I3L945-1", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#I3L945-1", "sequence": { "sequence": "MPLYSGERPLRLAPRTSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDTVKETDSSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPKASDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE", "length": 505, "header": "tr|I3L945-1|I3LIN5_PIG Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase OS=Sus scrofa OX=9823 GN=USP14 PE=1 SV=3 CANONICAL=I3LIN5-1" }, "locus": { "chromosome": "6", "start_pos": 106139172, "end_pos": 106090929, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027919.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027919.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020556.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020556.3" } ] } }, { "isoform_ac": "I3LIN5-1", "url": "https://www.uniprot.org/uniprotkb/I3LIN5/entry#I3LIN5-1", "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDTVKETDSSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPKASDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE", "length": 493, "header": "tr|I3LIN5-1|I3LIN5_PIG Isoform 1 of Ubiquitin carboxyl-terminal hydrolase OS=Sus scrofa OX=9823 GN=USP14 PE=1 SV=2 CANONICAL=I3LIN5-1" }, "locus": { "chromosome": "6", "start_pos": 106139172, "end_pos": 106090929, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025797.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025797.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023941.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023941.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 235, "start_aa": "Thr", "end_pos": 235, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr235", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L945", "url": "https://www.uniprot.org/uniprotkb/I3L945" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5689880", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "resource": "Reactome", "description": "Ub-specific processing proteases" }, { "id": "R-SSC-9758274", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9758274", "resource": "Reactome", "description": "Regulation of NF-kappa B signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "F7EK08-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSARETESSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMISFRSKFKDLEDKKVNQQPNANDKNSPPKEIKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKEDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEDSEQ", "length": 493 }, "evidence": [ { "id": "I3LIN5", "url": "https://omabrowser.org/oma/group/I3LIN5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P54578-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 14", "gene_name": "USP14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ", "length": 494 }, "evidence": [ { "id": "I3LIN5", "url": "https://omabrowser.org/oma/group/I3LIN5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0IIF7-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 14", "gene_name": "USP14", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWVQMMRVLQQKLEAIEDDTVKETDSSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKESQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPKTGDKDSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ", "length": 494 }, "evidence": [ { "id": "I3LIN5", "url": "https://omabrowser.org/oma/group/I3LIN5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55BC4-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "usp14", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVKVNVKWNKEKYEVDVDPSEPVSSFKGQLYSLTMVPIERQKIMGFKGGILKDDAQWKDLDLTEGKNLMLMGSAVELEKPDKPIVFLEDLPPSKAAALNSLLPAGLTNLGNTCYLNSTLQCLKTVPELLTIIKNYKPKTNSRYSNLLKSSQGLFNDLSRLHEPVTPSVFLNTFRMCFPRFSEKSPEGLYMQQDAEEAWGELLTAYAHELPLDNANGTDSHSADLIKRSMIGKLFGIQVVEKFTCKDNPEEEPTTREETLLKLACNITVETSYLFDGLKKGLEEEISKASPTLHKDAIYTKKTLIKQLPKYIMVQFVRFHWKDATKTKSKIVRVVQFPFTLDLFDLCTPEYKERLSPNRKRVEDEFNASLERKRKVIGGSGDGNDEDDKQVEKKAAVNNDNQPQSSTSSNDSVSTTGAAVDDDVFFKENETGKYELCAVLTHQGRYAESGHYVAWVKKSENKWYKFDDRDVTEHTDEDIKKLSGGGDFHICYLALYRTLTVKPKSSSTITEQK", "length": 512 }, "evidence": [ { "id": "I3LIN5", "url": "https://omabrowser.org/oma/group/I3LIN5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q949Y0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 6", "gene_name": "UBP6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MPTVSVKWQKKVLDGIEIDVSLPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDGDWAAIGVKDGQKLMMMGTADEIVKAPEKAIVFAEDLPEEALATNLGYSAGLVNLGNTCYMNSTVQCLKSVPELKSALSNYSLAARSNDVDQTSHMLTVATRELFGELDRSVNAVSPSQFWMVLRKKYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSLKAPTSSEGADAVKALFGVNLQSRLHCQESGEESSETESVYSLKCHISHEVNHLHEGLKHGLKGELEKTSPALGRTALYVKESLIDSLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLVLDIFDLCSEDLRKKLEAPRQKLREEEGKKLGLQTSAKSGSKDSDVKMTDAEASANGSGESSTVNPQEGTSSEKETHMTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPSMQREEDITKLSGGGDWHMAYITMYKARFVSM", "length": 482 }, "evidence": [ { "id": "I3LIN5", "url": "https://omabrowser.org/oma/group/I3LIN5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JMA1-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 14", "gene_name": "Usp14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSGRETDSSSAPAVTPSKKKSLIDQYFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNANDKNSPPKEIKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVRRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ", "length": 493 }, "evidence": [ { "id": "I3LIN5", "url": "https://omabrowser.org/oma/group/I3LIN5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VKZ8-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "Usp14", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPAFKVKVKWGRELYTDIVVNTDEEPILFKAQLFALTGVQPDRQKVMCKGGILKDDQWNLQIKDGAVVLLLGSKESVPEVPATPVKFIEDMNEAEAATAMRLPAGLTNLGNTCYMNATVQCLNAVPELRTALSTFSNDGTDTMSTAFSISSAMKSIFAQMEKGTTVTPIVLLQALHRASPQFAQTGENGTYRQQDANECWAEILKMLQQKLRPKNQEPSNTVQKRHSSFIDQFFGGTFEVKMSSEEDPDEPSTVTSENFLQLSCFISMDVKYMQSGLKSKMKEQLVKKSETLGRDAKYIRTYLVSRLPAYLTVQFVRFQYKGKEGINAKVLKDIKFPIDFDAFELCTPELQNKLCPMRSKFKDLEDKKMEVDVVKRNEPNEEKKDVKYEQFWFDDDLGSNNSGYYTLQAVLTHKGRSSSSGHYVAWVRSSGDVWFKFDDDEVSAVATDEILRLSGGGDWHCAYVLLYAPRRLEKL", "length": 475 }, "evidence": [ { "id": "I3LIN5", "url": "https://omabrowser.org/oma/group/I3LIN5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "proteasome complex", "id": "GO:0000502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000502", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "presynaptic cytosol", "id": "GO:0099523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099523", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "inflammatory response", "id": "GO:0006954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006954", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "regulation of chemotaxis", "id": "GO:0050920", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050920", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "negative regulation of ubiquitin-dependent protein catabolic process", "id": "GO:2000059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000059", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "protein K48-linked deubiquitination", "id": "GO:0071108", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071108", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "negative regulation of ERAD pathway", "id": "GO:1904293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904293", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "endopeptidase inhibitor activity", "id": "GO:0004866", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004866", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "proteasome binding", "id": "GO:0070628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070628", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" }, { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "I3LIN5", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-5689539", "name": "ADRM1:26S proteaseome binds USP14", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5689539", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689539" } ] }, { "id": "R-SSC-9750226", "name": "NLRC5 binds IKBKB and CHUK", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9750226", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9750226" } ] }, { "id": "R-SSC-9750942", "name": "USP14 deubiquitinates NLRC5", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-SSC-9750938" ], "output_participant_list": [ "R-SSC-937324" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9750942", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9750942" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-937324", "participant_name": "NLRC5 [cytosol]", "crossref": [ { "id": "XP_020948869.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCG00000039751", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000065636", "database": "ENSEMBL", "url": "" }, { "id": "A0A286ZS94", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000034500", "database": "ENSEMBL", "url": "" }, { "id": "90782", "database": "VGNC", "url": "" }, { "id": "XP_020948870.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-9750938", "participant_name": "NLRC5 [cytosol]", "crossref": [ { "id": "A0A286ZS94", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000039751", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000034500", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000065636", "database": "ENSEMBL", "url": "" }, { "id": "XP_020948870.1", "database": "RefSeq", "url": "" }, { "id": "XP_020948869.1", "database": "RefSeq", "url": "" }, { "id": "90782", "database": "VGNC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LIN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" }, { "id": "PS50235", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50235" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "USP", "eco_id": "ECO_0000259", "start_pos": 105, "end_pos": 483, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LIN5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIN5" }, { "id": "PS50053", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50053" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like", "eco_id": "ECO_0000259", "start_pos": 4, "end_pos": 72, "start_aa": "Tyr", "end_aa": "Met", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 235 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 117, "end_pos": 119 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], 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"categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028435", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028435", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10372", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10372", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10372:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10372:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00514", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00514", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6809371", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZNN1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNN1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNN1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZ45", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZ45-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ45-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5A8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5A8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5A8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5A8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFN8-1", "url": "https://www.uniprot.org/uniprotkb/I3LFN8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQDSNFLLSALQPEAGVCSLALPSDLQLDRRGAEGPEAERWRAARVQEQVRARLLQLGQQPRHNGAAEPEGVAEAARGGSRAQYHTLQAGFSSRSQGLSGDTTSTFRPIAKPTYSPASWSSRSAVDLSSSRRLSSAHNGGSAFGAAGYGGVQPAAPMPTRPVSFHERGGVGSRMDYDTLSLRSLRLGAGGPDDRCSVLSEQLEPAAASAYRAFAYERQASSSSGRAGLDWPEAAEGPPSRTIRAPAMRTLQRFQSSHRSRGGAGGAPGGVLEPMNRAPSVRSLSLSLADSGHLPDLRGLDSYGGRRTLQRLSSGFDDMDLPSAVKYLMASDPNLQVLGAAYIQHKCYSDAAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLVYDNADNKLALVEENGIFELLRTLREQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSGAGGPPLIQQNASEAEIFYNATGFLRNLSSASQATRQKMRECHGLVDALVTYIHHALDVGKCEDKSVENAVCVLRNLSYRLYDEMPPSALQRLEGRGRRDTAGAPPGEVVGCFTPQSRRLREVGADLGGWGQGARPSLADPLRPPAQLPLAADALTFAEVSKDPKGLEWLWSPQVVGLYNRLLQRCELNRHTTEAAAGALQNITAGDRRVRPRGPAGVLAARWGREAYTGVGTGARLSRPSPADGGARTSEQGGEEGRCAGAARGARPASRGARAAAERPREGEVRGPSRAGLRGLGGFRFCAGLKGGAGGRSGPGGAPAPESPASLRLQWAGVLSRLALEQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPADVLVNIIAVLNNLVVASPVAARDLLYFDGLRKLVFIKKKQDSPDSEKSSRAASSLLANLWQYSKLHRDFRAVCSGTQGRPGQACGPWTQDGREGHGNLCGAGDPGRPGAHFQHPGEGGVQGSWCPDSGSPLHCRRATARRTSWARRRGRPWRRGMRCDPASKGGLAQGCSPASLEEKVDDGPGASRWSPIHVQLEGLGHGEGTRACGWGLGFCRAGSGAGLEDALMRGMVARSHWQRWGWLWPSSALGQPALGIKVAVNTAATAPPASIGQMWGSDPRTRQWSQA", "length": 1145, "header": "tr|I3LFN8-1|I3LFN8_PIG Isoform 1 of Plakophilin-3 OS=Sus scrofa OX=9823 GN=PKP3 PE=1 SV=4 CANONICAL=I3LFN8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LFN8/entry#A0A286ZNN1-1", "sequence": { "sequence": "MQDSNFLLSALQPEAGVCSLALPSDLQLDRRGAEGPEAERWRAARVQEQVRARLLQLGQQPRHNGAAEPEGVAEAARGGSRAQYHTLQAGFSSRSQGLSGDTTSTFRPIAKPTYSPASWSSRSAVDLSSSRRLSSAHNGGSAFGAAGYGGVQPAAPMPTRPVSFHERGGVGSRMDYDTLSLRSLRLGAGGPDDRCSVLSEQLEPAAASAYRAFAYERQASSSSGRAGLDWPEAAEGPPSRTIRAPAMRTLQRFQSSHRSRGGAGGAPGGVLEPMNRAPSVRSLSLSLADSGHLPDLRGLDSYGGRRTLQRLSSGFDDMDLPSAVKYLMASDPNLQVLGAAYIQHKCYSDAAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLVYDNADNKLALVEENGIFELLRTLREQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSGAGGPPLIQQNASEAEIFYNATGFLRNLSSASQATRQKMRECHGLVDALVTYIHHALDVGKCEDKSVENAVCVLRNLSYRLYDEMPPSALQRLEGRGRRDTAGAPPGEVVGCFTPQSRRLREVGADLGGWGQGARPSLADPLRPPAQLPLAADALTFAEVSKDPKGLEWLWSPQVVGLYNRLLQRCELNRHTTEAAAGALQNITAGDRRVRPRGPAGVLAARWGREAYTGVGTGARLSRPSPADGGARTSEQGGEEGRCAGAARGARPASRGARAAAERPREGEVRGPSRAGLRGLGGFRFCAGLKGGAGGRSGPGGAPAPESPASLRLQWAGVLSRLALEQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPADVLVNIIAVLNNLVVASPVAARDLLYFDGLRKLVFIKKKQDSPDSEKSSRAASSLLANLWQYSKLHRDFRAVCEVQGPGGTEMEVGAFCPGPGLPP", "length": 956, "header": "tr|A0A286ZNN1-1|I3LFN8_PIG Computationally mapped isoform of Plakophilin-3 OS=Sus scrofa OX=9823 GN=PKP3 PE=1 SV=3 CANONICAL=I3LFN8-1" }, "locus": { "chromosome": "2", "start_pos": 223508, "end_pos": 215799, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051706.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051706.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033235.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033235.3" } ] } }, { "isoform_ac": "A0A5G2QZ45-1", "url": "https://www.uniprot.org/uniprotkb/I3LFN8/entry#A0A5G2QZ45-1", "sequence": { "sequence": "MSSGRAGVPSPPSLCPSVLPHTEAASSAEPRMQPRTPRPAAVASGLSPGAGSVPTTSRPEAGVCSLALPSDLQLDRRGAEGPEAERWRAARVQEQVRARLLQLGQQPRHNGAAEPEGVAEAARGGSRAQYHTLQAGFSSRSQGLSGDTTSTFRPIAKPTYSPASWSSRSAVDLSSSRRLSSAHNGGSAFGAAGYGGVQPAAPMPTRPVSFHERGGVGSRMDYDTLSLRSLRLGAGGPDDRCSVLSEQLEPAAASAYRAFAYERQASSSSGRAGLDWPEAAEGPPSRTIRAPAMRTLQRFQSSHRSRGGAGGAPGGVLEPMNRAPSVRSLSLSLADSGHLPDLRGLDSYGGRRTLQRLSSGFDDMDLPSAVKYLMASDPNLQVLGAAYIQHKCYSDAAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLVYDNADNKLALVEENGIFELLRTLREQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSGAGGPPLIQQNASEAEIFYNATGFLRNLSSASQATRQKMRECHGLVDALVTYIHHALDVGKCEDKSVENAVCVLRNLSYRLYDEMPPSALQRLEGRGRRDTAGAPPGEVVGCFTPQSRRLRELPLAADALTFAEVSKDPKGLEWLWSPQVVGLYNRLLQRCELNRHTTEAAAGALQNITAGDRRWAGVLSRLALEQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPADVLVNIIAVLNNLVVASPVAARDLLYFDGLRKLVFIKKKQDSPDSEKSSRAASSLLANLWQYSKLHRDFRAVCSGTQGRPGQACGPWTQDGREGHGNLCGAGDPGRPGAHFQHPGEGGVQGSWCPDSGSPLHCRRATARRTSWARRRGRPWRRGMRCDPASKGGLAQGCSPASLEEKVDDGPGASRWSPIHVQLEGLGHGEGTRACGWGLGFCRAGSGAGLEDALMRGMVARSHWQRWGWLWPSSALGQPALGIKVAVNTAATAPPASIGQMWGSDPRTRQWSQA", "length": 1045, "header": "tr|A0A5G2QZ45-1|I3LFN8_PIG Computationally mapped isoform of Plakophilin-3 OS=Sus scrofa OX=9823 GN=PKP3 PE=1 SV=2 CANONICAL=I3LFN8-1" }, "locus": { "chromosome": "2", "start_pos": 222834, "end_pos": 214195, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083891.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083891.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070153.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070153.2" } ] } }, { "isoform_ac": "A0A5G2R5A8-1", "url": "https://www.uniprot.org/uniprotkb/I3LFN8/entry#A0A5G2R5A8-1", "sequence": { "sequence": "MQDSNFLLSALQPEAGVCSLALPSDLQLDRRGAEGPEAERWRAARVQEQVRARLLQLGQQPRHNGAAEPEGVAEAARGGSRAQYHTLQAGFSSRSQGLSGDTTSTFRPIAKPTYSPASWSSRSAVDLSSSRRLSSAHNGGSAFGAAGYGGVQPAAPMPTRPVSFHERGGVGSRMDYDTLSLRSLRLGAGGPDDRCSVLSEQLEPAAASAYRAFAYERQASSSSGRAGLDWPEAAEGPPSRTIRAPAMRTLQRFQSSHRSRGGAGGAPGGVLEPMNRAPSVRSLSLSLADSGHLPDLRGLDSYGGRRTLQRLSSGFDDMDLPSAVKYLMASDPNLQVLGAAYIQHKCYSDAAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLVYDNADNKLALVEENGIFELLRTLREQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSGAGGPPLIQQNASEAEIFYNATGFLRNLSSASQATRQKMRECHGLVDALVTYIHHALDVGKCEDKSVENAVCVLRNLSYRLYDEMPPSALQRLEGRGRRDTAGAPPGEVVGCFTPQSRRLREVGADLGGWGQGARPSLADPLRPPAQLPLAADALTFAEVSKDPKGLEWLWSPQVVGLYNRLLQRCELNRHTTEAAAGALQNITAGDRRVRPRGPAGVLAARWGREAYTGVGTGARLSRPSPADGGARTSEQGGEEGRCAGAARGARPASRGARAAAERPREGEVRGPSRAGLRGLGGFRFCAGLKGGAGGRSGPGGAPAPESPASLRLQWAGVLSRLALEQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPADVLVNIIAVLNNLVVASPVAARDLLYFDGLRKLVFIKKKQDSPDSEKSSRAASSLLANLWQYSKLHRDFRAKGYRKEDFLGP", "length": 942, "header": "tr|A0A5G2R5A8-1|I3LFN8_PIG Computationally mapped isoform of Plakophilin-3 OS=Sus scrofa OX=9823 GN=PKP3 PE=1 SV=1 CANONICAL=I3LFN8-1" }, "locus": { "chromosome": "2", "start_pos": 222413, "end_pos": 215799, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088981.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088981.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071504.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071504.1" } ] } }, { "isoform_ac": "I3LFN8-1", "url": "https://www.uniprot.org/uniprotkb/I3LFN8/entry#I3LFN8-1", "sequence": { "sequence": "MQDSNFLLSALQPEAGVCSLALPSDLQLDRRGAEGPEAERWRAARVQEQVRARLLQLGQQPRHNGAAEPEGVAEAARGGSRAQYHTLQAGFSSRSQGLSGDTTSTFRPIAKPTYSPASWSSRSAVDLSSSRRLSSAHNGGSAFGAAGYGGVQPAAPMPTRPVSFHERGGVGSRMDYDTLSLRSLRLGAGGPDDRCSVLSEQLEPAAASAYRAFAYERQASSSSGRAGLDWPEAAEGPPSRTIRAPAMRTLQRFQSSHRSRGGAGGAPGGVLEPMNRAPSVRSLSLSLADSGHLPDLRGLDSYGGRRTLQRLSSGFDDMDLPSAVKYLMASDPNLQVLGAAYIQHKCYSDAAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLVYDNADNKLALVEENGIFELLRTLREQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSGAGGPPLIQQNASEAEIFYNATGFLRNLSSASQATRQKMRECHGLVDALVTYIHHALDVGKCEDKSVENAVCVLRNLSYRLYDEMPPSALQRLEGRGRRDTAGAPPGEVVGCFTPQSRRLREVGADLGGWGQGARPSLADPLRPPAQLPLAADALTFAEVSKDPKGLEWLWSPQVVGLYNRLLQRCELNRHTTEAAAGALQNITAGDRRVRPRGPAGVLAARWGREAYTGVGTGARLSRPSPADGGARTSEQGGEEGRCAGAARGARPASRGARAAAERPREGEVRGPSRAGLRGLGGFRFCAGLKGGAGGRSGPGGAPAPESPASLRLQWAGVLSRLALEQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPADVLVNIIAVLNNLVVASPVAARDLLYFDGLRKLVFIKKKQDSPDSEKSSRAASSLLANLWQYSKLHRDFRAVCSGTQGRPGQACGPWTQDGREGHGNLCGAGDPGRPGAHFQHPGEGGVQGSWCPDSGSPLHCRRATARRTSWARRRGRPWRRGMRCDPASKGGLAQGCSPASLEEKVDDGPGASRWSPIHVQLEGLGHGEGTRACGWGLGFCRAGSGAGLEDALMRGMVARSHWQRWGWLWPSSALGQPALGIKVAVNTAATAPPASIGQMWGSDPRTRQWSQA", "length": 1145, "header": "tr|I3LFN8-1|I3LFN8_PIG Isoform 1 of Plakophilin-3 OS=Sus scrofa OX=9823 GN=PKP3 PE=1 SV=4 CANONICAL=I3LFN8-1" }, "locus": { "chromosome": "2", "start_pos": 222834, "end_pos": 215799, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024904.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024904.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022880.4", "url": "https://www.ensembl.org/id/ENSSSCP00000022880.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZ45", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ45" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6805567", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "resource": "Reactome", "description": "Keratinization" }, { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 13, "go_terms": [ { "name": "positive regulation of cell-cell adhesion", "id": "GO:0022409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022409", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "cell-cell adhesion", "id": "GO:0098609", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098609", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "desmosome assembly", "id": "GO:0002159", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002159", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "regulation of cytokine production involved in immune response", "id": "GO:0002718", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002718", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "protein localization to plasma membrane", "id": "GO:0072659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072659", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "actin cytoskeleton organization", "id": "GO:0030036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030036", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "epithelial structure maintenance", "id": "GO:0010669", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010669", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "positive regulation of cell cycle G1/S phase transition", "id": "GO:1902808", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902808", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "epithelial cell-cell adhesion", "id": "GO:0090136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090136", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "positive regulation of protein localization", "id": "GO:1903829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903829", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "negative regulation of mRNA catabolic process", "id": "GO:1902373", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902373", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "regulation of hair follicle development", "id": "GO:0051797", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051797", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "enzyme binding", "id": "GO:0019899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019899", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { "name": "cadherin binding", "id": "GO:0045296", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045296", "evidence": [ { "database": "UniProtKB", "id": "I3LFN8", "url": "https://www.uniprot.org/uniprotkb/I3LFN8" } ], "pmid": "" }, { 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"database": "Ensembl Peptide", "id": "ENSSSCP00000041629.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041629.2" } ] } }, { "isoform_ac": "A0A287BEX5-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#A0A287BEX5-1", "sequence": { "sequence": "MVAWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKVARLFPFVSSLDLREGQVTPWRGVTNSKLIQLGREASSRLCPPATGGLDPSPGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSVVEGDVNEGGVKAWEPHQVHNPLAFSDEEEEDLLDFMYKFKEPRKTEFPLEAPPRILRSRFRKKSTSSSATETT", "length": 324, "header": "tr|A0A287BEX5-1|A0A287BEX5_PIG Computationally mapped isoform of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=3 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58555931, "end_pos": 58436456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044678.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044678.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055107.3", "url": "https://www.ensembl.org/id/ENSSSCP00000055107.3" } ] } }, { "isoform_ac": "A0A287BJE6-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#A0A287BJE6-1", "sequence": { "sequence": "MDHLQAGGVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSGTA", "length": 174, "header": "tr|A0A287BJE6-1|A0A287BJE6_PIG Computationally mapped isoform of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=1 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58555870, "end_pos": 58436464, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065039.2", "url": "https://www.ensembl.org/id/ENSSSCT00000065039.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056499.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056499.1" } ] } }, { "isoform_ac": "A0A4X1VZZ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#A0A4X1VZZ0-1", "sequence": { "sequence": "NDLVSSPGHDGDAQLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSGRCHFTAPLFHLVGGTS", "length": 218, "header": "tr|A0A4X1VZZ0-1|A0A4X1VZZ0_PIG Computationally mapped isoform of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=1 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58544964, "end_pos": 58497038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083509.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083509.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066303.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066303.1" } ] } }, { "isoform_ac": "A0A5G2QHI5-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#A0A5G2QHI5-1", "sequence": { "sequence": "MWLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSGRCHFTAPLFHLVGGTS", "length": 206, "header": "tr|A0A5G2QHI5-1|A0A5G2QHI5_PIG Computationally mapped isoform of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=2 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58544964, "end_pos": 58497418, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073421.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073421.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063315.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063315.2" } ] } }, { "isoform_ac": "A0A5G2RC28-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#A0A5G2RC28-1", "sequence": { "sequence": "MVAWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSVCSCCSACRTRKVVEGDVNEGGVKAWEPHQVHNPLAFSDEEEEDLLDFMYKFKEPRKTEFPLEAPPRILRSRFRKKSTSSSATETTVMVHSLQPVSQYTRDVQNEERQYFSDRVSRALTGFPRERSLSSERPVLEKAKQNPTDPLKHT", "length": 346, "header": "tr|A0A5G2RC28-1|A0A5G2RC28_PIG Computationally mapped isoform of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=1 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58556922, "end_pos": 58436456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079944.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079944.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068169.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068169.1" } ] } }, { "isoform_ac": "A0A5G2RFB9-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#A0A5G2RFB9-1", "sequence": { "sequence": "MVAWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKVARLFPFVSSLDLREGQVTPWRGVTNSKLIQLGREASSRLCPPATGGLDPSPGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSVCSCCSACRTRKVVEGDVNEGGVKAWEPHQVHNPLAFSDEEEEDLLDFMYKFKEPRKTEFPLEAPPRILRSRFRKKSTSSSATETTIQGSDWFPQGEEPIVGAPCFRES", "length": 359, "header": "tr|A0A5G2RFB9-1|A0A5G2RFB9_PIG Computationally mapped isoform of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=1 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58556888, "end_pos": 58436456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089559.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089559.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069693.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069693.1" } ] } }, { "isoform_ac": "A0A8W4FGU3-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#A0A8W4FGU3-1", "sequence": { "sequence": "MQNFGVLLGHSLWLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSGRCHFTAPLFHLVGGTS", "length": 217, "header": "tr|A0A8W4FGU3-1|A0A8W4FGU3_PIG Computationally mapped isoform of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=1 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58544964, "end_pos": 58496248, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098112.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098112.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078096.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078096.1" } ] } }, { "isoform_ac": "I3LD14-1", "url": "https://www.uniprot.org/uniprotkb/I3LD14/entry#I3LD14-1", "sequence": { "sequence": "MVAWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLSTIRGDGAPAPSGPPAPGPGRASGKHGQPKMSRSASESAGSSGTA", "length": 201, "header": "tr|I3LD14-1|I3LD14_PIG Isoform 1 of Receptor expression-enhancing protein OS=Sus scrofa OX=9823 GN=REEP1 PE=1 SV=4 CANONICAL=I3LD14-1" }, "locus": { "chromosome": "3", "start_pos": 58555870, "end_pos": 58436456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029906.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029906.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021942.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021942.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZPF6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPF6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LD14", "url": "https://www.uniprot.org/uniprotkb/I3LD14" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LD14", "url": "https://www.uniprot.org/uniprotkb/I3LD14" } ], "pmid": "" }, { "name": "cytoplasmic microtubule", "id": "GO:0005881", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005881", "evidence": [ { "database": "UniProtKB", "id": "I3LD14", "url": "https://www.uniprot.org/uniprotkb/I3LD14" } ], "pmid": "" }, { "name": "endoplasmic reticulum tubular network", "id": "GO:0071782", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071782", "evidence": [ { "database": "UniProtKB", "id": "I3LD14", "url": "https://www.uniprot.org/uniprotkb/I3LD14" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum tubular network organization", "id": "GO:0071786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071786", "evidence": [ { "database": "UniProtKB", "id": "I3LD14", "url": "https://www.uniprot.org/uniprotkb/I3LD14" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "I3LD14", "url": "https://www.uniprot.org/uniprotkb/I3LD14" } ], "pmid": "" }, { "name": "olfactory receptor binding", "id": "GO:0031849", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031849", "evidence": [ { "database": "UniProtKB", "id": "I3LD14", "url": "https://www.uniprot.org/uniprotkb/I3LD14" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LG35-1", "uniprot_ac": "I3LG35", "uniprot_id": "I3LG35_PIG", "mass": { "chemical_mass": 89862.0, "monoisotopic_mass": 89862.0 }, "refseq": {}, "gene_names": [ { "name": "TRMT1L", "type": "recommended", "evidence": [ { "id": "I3LG35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ] } ], "protein_names": [ { "name": "tRNA (guanine(27)-N(2))-dimethyltransferase", "type": "recommended", "evidence": [ { "id": "I3LG35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG35/entry#names_and_taxonomy" } ] }, { "name": "tRNA methyltransferase 1-like protein", "type": "synonym", "evidence": [ { "id": "I3LG35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG35/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TRMT1L", "url": "https://www.uniprot.org/uniprotkb/I3LG35", "locus": { "chromosome": "9", "start_pos": 126300390, "end_pos": 126347274, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021393", "url": "https://www.ensembl.org/id/ENSSSCG00000021393" } ] } } ], "crossref": [ { "id": "I3LG35", "url": "https://alphafold.ebi.ac.uk/entry/I3LG35", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021393", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021393", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR002905", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002905", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042296", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042296", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10631", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10631", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10631:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10631:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02005", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02005", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "83895", "url": "https://www.rhea-db.org/rhea/83895", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZQK8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQK8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQK8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKR8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QKR8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKR8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG35-1", "url": "https://www.uniprot.org/uniprotkb/I3LG35-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "WFFVFCLLPASCPPLLLPHSSDPSSGRSRQFSHPAVSPSWSRGGPGTEAVTTENMAEEELLPQEKEEVEGAQGQVPTPALDSAPASAPAPDSAPAPASAPVPAPALAQAPALSPSLASAPDEAESNGLVSPLKSVLTRQDEDGISETELKIEEKEVLKEPPSILDSSDLTKERHISIQRQLADLEKLAFVTEGDFDSTSSLNSNNLDTGNKQICPLCPKEKFRACNSHKLHRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQLSSKMGAHYHCIICSATITRRTDMLGHVKRHVNKGETKSRYIAASAAKPPNEILKEADTDVQVCPNYSVPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEESDDILEEGEENLGNVKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYKQLPCNCYGSMPGKTAIELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQKECGVLKTTDDTTTENHVAQGKRKSNEAITNLAKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSEGHVQSAAEDTVANRVEMSVNDKAEASGCRRW", "length": 811, "header": "tr|I3LG35-1|I3LG35_PIG Isoform 1 of tRNA (guanine(27)-N(2))-dimethyltransferase OS=Sus scrofa OX=9823 GN=TRMT1L PE=1 SV=3 CANONICAL=I3LG35-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQK8-1", "url": "https://www.uniprot.org/uniprotkb/I3LG35/entry#A0A286ZQK8-1", "sequence": { "sequence": "MAEEELLPQEKEEVEGAQGQVPTPALDSAPASAPAPDSAPAPASAPVPAPALAQAPALSPSLASAPDEAESNGLVSPLKSVLTRQDEDGISETELKIEEKEVLKEPPSILDSSDLTKERHISIQRQLADLEKLAFVTEGDFDSTSSLNSNNLDTGNKQICPLCPKEKFRACNSHKLHRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQLSSKMGAHYHCIICSATITRRTDMLGHVKRHVNKGETKSRYIAASAAKPPNEILKEADTDVQVCPNYSVPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEESDDILEEGEENLGNVKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEEECGVLKTTDDTTTENHVAQGKRKSNEAITNLAKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSEGHVQSAAEDTVANRVEMSVNDKAEASGCRRW", "length": 689, "header": "tr|A0A286ZQK8-1|I3LG35_PIG Computationally mapped isoform of tRNA (guanine(27)-N(2))-dimethyltransferase OS=Sus scrofa OX=9823 GN=TRMT1L PE=1 SV=2 CANONICAL=I3LG35-1" }, "locus": { "chromosome": "9", "start_pos": 126347027, "end_pos": 126303654, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049159.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049159.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033757.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033757.2" } ] } }, { "isoform_ac": "A0A5G2QKR8-1", "url": "https://www.uniprot.org/uniprotkb/I3LG35/entry#A0A5G2QKR8-1", "sequence": { "sequence": "MAEEELLPQEKEEVEGAQGQVPTPALDSAPASAPAPDSAPAPASAPVPAPALAQAPALSPSLASAPDEAESNGLVSPLKSVLTRQDEDGISETELKIEEKEVLKEPPSILDSSDLTKERHISIQRQLADLEKLAFVTEGDFDSTSSLNSNNLDTGNKQICPLCPKEKFRACNSHKLHRHLQNLHWKVSVEFEASAAKPPNEILKEADTDVQVCPNYSVPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEESDDILEEGEENLGNVKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYKQLPCNCYGSMPGKTAIELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQKECGVLKTTDDTTTENHVAQGKRKSNEAITNLAKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSEGHVQSAAEDTVANRVEMSVNDKAEASGCRRW", "length": 692, "header": "tr|A0A5G2QKR8-1|I3LG35_PIG Computationally mapped isoform of tRNA (guanine(27)-N(2))-dimethyltransferase OS=Sus scrofa OX=9823 GN=TRMT1L PE=1 SV=2 CANONICAL=I3LG35-1" }, "locus": { "chromosome": "9", "start_pos": 126347027, "end_pos": 126303654, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091286.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091286.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065128.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065128.2" } ] } }, { "isoform_ac": "I3LG35-1", "url": "https://www.uniprot.org/uniprotkb/I3LG35/entry#I3LG35-1", "sequence": { "sequence": "WFFVFCLLPASCPPLLLPHSSDPSSGRSRQFSHPAVSPSWSRGGPGTEAVTTENMAEEELLPQEKEEVEGAQGQVPTPALDSAPASAPAPDSAPAPASAPVPAPALAQAPALSPSLASAPDEAESNGLVSPLKSVLTRQDEDGISETELKIEEKEVLKEPPSILDSSDLTKERHISIQRQLADLEKLAFVTEGDFDSTSSLNSNNLDTGNKQICPLCPKEKFRACNSHKLHRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQLSSKMGAHYHCIICSATITRRTDMLGHVKRHVNKGETKSRYIAASAAKPPNEILKEADTDVQVCPNYSVPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEESDDILEEGEENLGNVKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYKQLPCNCYGSMPGKTAIELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQKECGVLKTTDDTTTENHVAQGKRKSNEAITNLAKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSEGHVQSAAEDTVANRVEMSVNDKAEASGCRRW", "length": 811, "header": "tr|I3LG35-1|I3LG35_PIG Isoform 1 of tRNA (guanine(27)-N(2))-dimethyltransferase OS=Sus scrofa OX=9823 GN=TRMT1L PE=1 SV=3 CANONICAL=I3LG35-1" }, "locus": { "chromosome": "9", "start_pos": 126347189, "end_pos": 126303654, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029214.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029214.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023028.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023028.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 566, "start_aa": "Thr", "end_pos": 566, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr566", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 77, "start_aa": "Thr", "end_pos": 77, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr77", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QKR8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QKR8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "tRNA (guanine) methyltransferase activity", "id": "GO:0016423", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016423", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" }, { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" }, { "name": "tRNA (guanine(27)-N2)-dimethyltransferase activity", "id": "GO:0160248", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160248", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "tRNA processing", "id": "GO:0008033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008033", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" }, { "name": "tRNA N2-guanine methylation", "id": "GO:0002940", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002940", "evidence": [ { "database": "UniProtKB", "id": "I3LG35", "url": "https://www.uniprot.org/uniprotkb/I3LG35" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 334, "end_pos": 336, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "83895", "name": "", "equation": "guanosine(27) in tRNA(Tyr) + 2 S-adenosyl-L-methionine = N(2)-dimethylguanosine(27) in tRNA(Tyr) + 2 S-adenosyl-L-homocysteine + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "83895", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/83895" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LG35-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 811, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LG35-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LG35" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LG35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG35" }, { "id": "PS00028", "database": "PROSITE", "url": "https://prosite.expasy.org/PS00028" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 279, "end_pos": 299, "start_aa": "Cys", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 77, 566 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 334, "end_pos": 336 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZSN6-1", "uniprot_ac": "A0A286ZSN6", "uniprot_id": "A0A286ZSN6_PIG", "mass": { "chemical_mass": 75043.0, "monoisotopic_mass": 75043.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100622780", "type": "recommended", "evidence": [ { "id": "A0A286ZSN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6" } ] } ], "protein_names": [ { "name": "Thymopoietin", "type": "recommended", "evidence": [ { "id": "A0A286ZSN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100622780", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6", "locus": {} } ], "crossref": [ { "id": "A0A286ZSN6", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZSN6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000887", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000887", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12935", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12935", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12940", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12940", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003887", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003887", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011015", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011015", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051656", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051656", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "TPFRMEE", "url": "https://omabrowser.org/oma/group/TPFRMEE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12019", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12019", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12019:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12019:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12019:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12019:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03020", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03020", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08198", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08198", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF11560", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11560", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZRK0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRK0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSN6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSN6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1G6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1G6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPEFLEDPSVLTKEKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPTLAAGANSKGPPDFSSDEEREPTPVLGSGAAAAGRSRAAVKATKKTDKPRLEDKDDLDVTELTNEELLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEGKKKEHKKVKSTRDCVPFSELPTTPSGGFFQGISFPETSTRPPLGRTERQAAKKVHTSKGDPPREPLIAATLPGREQLQKLASGESLLISSKSSHGRCLEKSSSTSSQHELAALLVSAAASPSLIKETTNTCYKDIVENIYCGEKSGIQPLCTKRSHDSDQSTLSSERKALEESERSQVISPPLAQAIRDYVNSLLVQGGIGSLPGTSNSTPPLDVENTWKRIDQSNSQETESLSPPRKLPRLSGKSAEGKDSGSSVAFQNIPESELMSSSAKTVVSHSLTTLGIDMSKQSQRDKIDAPELSFPFHESILKVIEEEWQQIDRQLPSLACKYPVSSGEAVRILSVPKVDDEILGFISEATPPANIQAASTESCEKQLDLALCRTYEAAASALQIATHTAFVVQAMQADISKAAQILSTDPSRMHQALGTLSKTYDAASFLCEAAFDGVKMAAHTMGSSTLGRRYLWLRDCKINPASKNKLVVTPFKGGTLFGREALKVIKKRGNKH", "length": 691, "header": "tr|A0A286ZSN6-1|A0A286ZSN6_PIG Isoform 1 of Thymopoietin OS=Sus scrofa OX=9823 GN=LOC100622780 PE=1 SV=2 CANONICAL=A0A286ZSN6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRK0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6/entry#A0A286ZRK0-1", "sequence": { "sequence": "MPEFLEDPSVLTKEKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPTLAAGANSKGPPDFSSDEEREPTPVLGSGAAAAGRSRAAVKATKKTDKPRLEDKDDLDVTELTNEELLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKTPVTLKQRRVEHNQVVNRVTGNFKHAAPILPITEFSDIPRRTPKKPLTRAEVGEKTEERRVERDILKEMFPFEASTPTGISASCRRPIKGAAGRPLELSDFRMEESFSSKYIPKYVPLADVKSEKTKKGRSIPMWIKILLFVVVAIFLFLVYQAMETNQGNPFYQFISNNSKNAN", "length": 380, "header": "tr|A0A286ZRK0-1|A0A286ZSN6_PIG Computationally mapped isoform of Thymopoietin OS=Sus scrofa OX=9823 GN=LOC100622780 PE=1 SV=2 CANONICAL=A0A286ZSN6-1" }, "locus": { "chromosome": "AEMK02000183.1", "start_pos": 37187, "end_pos": 10252, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056515.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056515.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034253.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034253.2" } ] } }, { "isoform_ac": "A0A286ZSN6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6/entry#A0A286ZSN6-1", "sequence": { "sequence": "MPEFLEDPSVLTKEKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPTLAAGANSKGPPDFSSDEEREPTPVLGSGAAAAGRSRAAVKATKKTDKPRLEDKDDLDVTELTNEELLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEGKKKEHKKVKSTRDCVPFSELPTTPSGGFFQGISFPETSTRPPLGRTERQAAKKVHTSKGDPPREPLIAATLPGREQLQKLASGESLLISSKSSHGRCLEKSSSTSSQHELAALLVSAAASPSLIKETTNTCYKDIVENIYCGEKSGIQPLCTKRSHDSDQSTLSSERKALEESERSQVISPPLAQAIRDYVNSLLVQGGIGSLPGTSNSTPPLDVENTWKRIDQSNSQETESLSPPRKLPRLSGKSAEGKDSGSSVAFQNIPESELMSSSAKTVVSHSLTTLGIDMSKQSQRDKIDAPELSFPFHESILKVIEEEWQQIDRQLPSLACKYPVSSGEAVRILSVPKVDDEILGFISEATPPANIQAASTESCEKQLDLALCRTYEAAASALQIATHTAFVVQAMQADISKAAQILSTDPSRMHQALGTLSKTYDAASFLCEAAFDGVKMAAHTMGSSTLGRRYLWLRDCKINPASKNKLVVTPFKGGTLFGREALKVIKKRGNKH", "length": 691, "header": "tr|A0A286ZSN6-1|A0A286ZSN6_PIG Isoform 1 of Thymopoietin OS=Sus scrofa OX=9823 GN=LOC100622780 PE=1 SV=2 CANONICAL=A0A286ZSN6-1" }, "locus": { "chromosome": "AEMK02000183.1", "start_pos": 21778, "end_pos": 10252, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038342.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038342.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034647.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034647.2" } ] } }, { "isoform_ac": "A0A5G2R1G6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6/entry#A0A5G2R1G6-1", "sequence": { "sequence": "MPEFLEDPSVLTKEKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPTLAAGANSKGPPDFSSDEEREPTPVLGSGAAAAGRSRAAVAGKATKKTDKPRLEDKDDLDVTELTNEELLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKTPVTLKQRRVEHNQSYSQAGITETEWTSGSSKGGPLQALTRESTRGSRRTPRKRVETSEHFRIDGAVISESTPIAETIMASSNETLVVNRVTGNFKHAAPILPITEFSDIPRRTPKKPLTRAEVGEKTEERRVERDILKEMFPFEASTPTGISASCRRPIKGAAGRPLELSDFRMEESFSSKYIPKYVPLADVKSEKTKKGRSIPMWIKILLFVVVAIFLFLVYQAMETNQGNPFYQFISNNSKNAN", "length": 454, "header": "tr|A0A5G2R1G6-1|A0A5G2R1G6_PIG Computationally mapped isoform of Thymopoietin OS=Sus scrofa OX=9823 GN=LOC100622780 PE=1 SV=1 CANONICAL=A0A286ZSN6-1" }, "locus": { "chromosome": "AEMK02000183.1", "start_pos": 37187, "end_pos": 10252, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076132.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076132.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070195.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070195.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRK0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRK0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YQB2-1", "protein_name": "Thymopoietin", "gene_name": "TMPO", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPEFLADPSVLTKEKLKSELIANNVSLPGGEQRKDVYVQLYLQHLTARNPPAVAQPDFSSDEEREPTPIGARGRGAAVGRKATKKTDKLRAEEKDDLDVTELSNEDLQEQLMKYGINPGPIVATTRKLYEKKLLKLMEQGPELKTPMPLPVISSTTENTRQNGNNDSDQYSDNEEEPKTELRLEKREPLKGRMKTPVTLKQRRVVEHNQTYSQDGVTETVWTSGSSKSGPLQAFSRESTRVSRRTPRKRVEATLQLPVDDAVISESTPIAETILTASNETLVGNRVPGNFKHAAPTLSISEPSDMPRRTPKKPLMTAEQKETDCPHQCLFNHIGRKHSYDVLNTAMIEETEESSECIKTPKVTRQLPIIKVPERTHTEERKVERDILKEMFPYEVSTPTGISASCRRPIKGAASRPIEHTDFKMDESFFKYAPKYSTSSDIKSEKPSTKKERSVPLWIKILLFVLVSVFLFSVYQSMETNQGNPFSKYISVFTQDSSN", "length": 498 }, "evidence": [ { "id": "A0A286ZSN6", "url": "https://omabrowser.org/oma/group/A0A286ZSN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MCA8-1", "protein_name": "Thymopoietin", "gene_name": "TMPO", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPEFLEDPSVLTKEKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPPLATSANSKGPPDFSSDEEREPTPVLGSGAAVAGRSRAAVGRKATKKTDKPRPEDKDDLDVTELSNEDLLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQGTESRSSTPLPTISSSVENTRQNGSNDSDRYSDNEEGKKKEHKKAKSTRDFVPFSELPTTASGGFFQAISFPEISTRPPLGRTEQQAAKKVHSSKGDLPREPLTATTLPDRDQKLASGGLFVSSKSSHDRCLEKSSSSSPQHELAAMLVSAAASPSLIKETTSTCYKDTVENTYFGEKSGIQPVCTKRSHGSDQSVVSSERKALEESEQSQVISPPLARAIRDYVNSLLVQGGGDSKIELKLEKREPLKGRAKTPVTLKQRRVEHNQSYSQAGVTETEWTSGSSKGGLLQALTRESTRGSRRTPRKRVETSEHFRIDGAIISESTPIAETIMASSNETLVVNRVTGNFKHAAPILPITEFSDIPRRTPKKPLTRAEVGEKTEERRVERDILKEMFPFEAATPTGISASCRRPIKGAAGRPLELSDFRMEESYSSKYIPKYVPLADVKSEKTKKGRSIPMWIKILLFVVVAGFLFLVYQAMETNQGNPFYKFLSNDSKKVN", "length": 652 }, "evidence": [ { "id": "A0A286ZSN6", "url": "https://omabrowser.org/oma/group/A0A286ZSN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 176, "end_pos": 178, "annotation": "n_glycosylation_sequon" }, { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" }, { "start_pos": 395, "end_pos": 397, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZSN6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 691, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZSN6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZSN6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZSN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6" }, { "id": "PS50954", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50954" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LEM", "eco_id": "ECO_0000259", "start_pos": 107, "end_pos": 151, "start_aa": "Asp", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZSN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN6" }, { "id": "PS50955", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50955" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LEM-like", "eco_id": "ECO_0000259", "start_pos": 5, "end_pos": 48, "start_aa": "Leu", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 173, "end_pos": 175 }, { "start_pos": 176, "end_pos": 178 }, { "start_pos": 24, "end_pos": 26 }, { "start_pos": 395, "end_pos": 397 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LEQ0-1", "uniprot_ac": "I3LEQ0", "uniprot_id": "I3LEQ0_PIG", "mass": { "chemical_mass": 83091.0, "monoisotopic_mass": 83091.0 }, "refseq": { "ac": "XP_003482132", "name": "oxysterol-binding protein-related protein 9 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482132" }, "gene_names": [ { "name": "OSBPL9", "type": "recommended", "evidence": [ { "id": "I3LEQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0" } ] }, { "name": "OSBPL9", "type": "synonym", "evidence": [ { "id": "XP_003482132", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482132" } ] } ], "protein_names": [ { "name": "Oxysterol-binding protein", "type": "recommended", "evidence": [ { "id": "I3LEQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#names_and_taxonomy" } ] }, { "name": "oxysterol-binding protein-related protein 9 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_003482132", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482132" } ] } ], "function": [ { "annotation": "Interacts with OSBPL11 to function as lipid transfer proteins. Together they form a heterodimer that localizes at the ER-trans-Golgi membrane contact sites, and exchanges phosphatidylserine (1,2-diacyl-sn-glycero-3-phospho-L-serine, PS) for phosphatidylinositol-4-phosphate (1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol 4-phosphate), PI(4)P) between the two organelles, a step that is critical for sphingomyelin synthesis in the Golgi complex.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZ49", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ49#function" }, { "database": "UniProtKB", "id": "ARBA00055284", "url": "https://www.uniprot.org/uniprotkb/ARBA00055284#function" }, { "database": "UniProtKB", "id": "A0A5G2R539", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R539#function" }, { "database": "UniProtKB", "id": "A0A5G2R8U6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8U6#function" }, { "database": "UniProtKB", "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0#function" }, { "database": "UniProtKB", "id": "A0A286ZSZ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSZ5#function" }, { "database": "UniProtKB", "id": "A0A287APQ9", "url": "https://www.uniprot.org/uniprotkb/A0A287APQ9#function" }, { "database": "UniProtKB", "id": "A0A5G2QIP5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIP5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OSBPL9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0", "locus": { "chromosome": "6", "start_pos": 160388677, "end_pos": 160566369, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021292", "url": "https://www.ensembl.org/id/ENSSSCG00000021292" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021292", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021292", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13290", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13290", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100517719", "url": "https://www.ncbi.nlm.nih.gov/gene/100517719", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000648", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000648", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018494", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018494", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037239", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037239", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A287APQ9", "url": "https://www.orthodb.org/?gene=A0A287APQ9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10972", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10972", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10972:SF200", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10972:SF200", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01237", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01237", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-192105", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-192105", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003482132", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482132", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "81667", "url": "https://www.rhea-db.org/rhea/81667", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZSZ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSZ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSZ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSZ5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZUZ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZUZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A9A0", "url": "https://www.uniprot.org/uniprotkb/A0A287A9A0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A9A0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A9A0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APQ9", "url": "https://www.uniprot.org/uniprotkb/A0A287APQ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287APQ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287APQ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIP5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIP5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIP5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZ49", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZ49-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZ49-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R539", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R539", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R539-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R539-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8U6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8U6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8U6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8U6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEQ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKKIETLKETTNSMVESIKHCIVLLQIAKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 736, "header": "tr|I3LEQ0-1|I3LEQ0_PIG Isoform 1 of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=2 CANONICAL=I3LEQ0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSZ5-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#A0A286ZSZ5-1", "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQISTTLAFFQSSGISPVLEFSKIIGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKKIETLKETTNSMVESIKHCIVLLQIAKSTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 746, "header": "tr|A0A286ZSZ5-1|I3LEQ0_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=2 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053356.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053356.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034763.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034763.2" } ] } }, { "isoform_ac": "A0A286ZUZ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#A0A286ZUZ0-1", "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKKIETLKETTNSMVESIKHCIVLLQIAKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 719, "header": "tr|A0A286ZUZ0-1|I3LEQ0_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=2 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048605.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048605.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035477.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035477.2" } ] } }, { "isoform_ac": "A0A287A9A0-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#A0A287A9A0-1", "sequence": { "sequence": "MMPLCASDNPFKHYFPQKIETLKETTNSMVESIKHCIVLLQIAKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 599, "header": "tr|A0A287A9A0-1|A0A287A9A0_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=2 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160433953, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036779.2", "url": "https://www.ensembl.org/id/ENSSSCT00000036779.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040582.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040582.2" } ] } }, { "isoform_ac": "A0A287APQ9-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#A0A287APQ9-1", "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQISTTLAFFQSSGISPVLEFSKIIGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKKIETLKETTNSMVESIKHCIVLLQIAKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 759, "header": "tr|A0A287APQ9-1|A0A287APQ9_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=1 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044653.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044653.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045929.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045929.2" } ] } }, { "isoform_ac": "A0A5G2QIP5-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#A0A5G2QIP5-1", "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQYLLYSSILLEFIKLTEADAYLQILIEQLKVWHSIIYGTDIKEESTRALLNEGMKLIFLTFFLKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 724, "header": "tr|A0A5G2QIP5-1|A0A5G2QIP5_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=2 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071687.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071687.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063781.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063781.2" } ] } }, { "isoform_ac": "A0A5G2QZ49-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#A0A5G2QZ49-1", "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKVWHSIIYGTDINMVESIKHCIVLLQIAKSTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 708, "header": "tr|A0A5G2QZ49-1|A0A5G2QZ49_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=1 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068200.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068200.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070171.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070171.1" } ] } }, { "isoform_ac": "A0A5G2R539-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#A0A5G2R539-1", "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 709, "header": "tr|A0A5G2R539-1|A0A5G2R539_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=1 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ 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"MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKVWHSIIYGTDIKEESTRALLNEGMKLIFLTFFLKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 727, "header": "tr|A0A5G2R8U6-1|A0A5G2R8U6_PIG Computationally mapped isoform of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=1 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074679.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074679.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072743.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072743.1" } ] } }, { "isoform_ac": "I3LEQ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0/entry#I3LEQ0-1", "sequence": { "sequence": "MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGIDDEDDSTFTITVDQKTFHFQARDADEREKWIHALEETILRHTLQLQGLDSGFVPTVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKKIETLKETTNSMVESIKHCIVLLQIAKDQCNAEKHADGIISTINPVDAIYQPSPLEPVISTMPSQTVLPPEPAQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKHLIDSSGSASVLTHSSSGNSLKCPDTTESLNSSMSNGTSDADLFDSHDDRDDEGEAGSVEEHKSVIMHLLSQVRLGMDLTKVVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDARDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECYNKKIQFNAHIWTKSKFLGMSIGVHNIGQGCVSCLDYDEHYILTFPNGYGRSILTVPWVELGGECSINCSKTGYNANIVFHTKPFYGGKKHRITAEIFSPNDKKSFCSIEGEWNGVMYAKYSTGENAVFIDTKKLPIIKKKVRKLEDQNEYESRCLWKDVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAAKH", "length": 736, "header": "tr|I3LEQ0-1|I3LEQ0_PIG Isoform 1 of Oxysterol-binding protein OS=Sus scrofa OX=9823 GN=OSBPL9 PE=1 SV=2 CANONICAL=I3LEQ0-1" }, "locus": { "chromosome": "6", "start_pos": 160566344, "end_pos": 160389386, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028073.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028073.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022539.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022539.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSZ5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSZ5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-192105", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-192105", "resource": "Reactome", "description": "Synthesis of bile acids and bile salts" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0" } ], "pmid": "" }, { "name": "phospholipid transfer to membrane", "id": "GO:0006649", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006649", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0" } ], "pmid": "" }, { "name": "phospholipid homeostasis", "id": "GO:0055091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055091", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0" } ], "pmid": "" }, { "name": "lysosomal membrane organization", "id": "GO:0097212", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097212", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ0", "url": "https://www.uniprot.org/uniprotkb/I3LEQ0" } ], "pmid": "" }, { "name": "sterol binding", "id": "GO:0032934", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032934", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ0", "url": 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZUT4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUT4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TZV4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TZV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TZV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TZV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGZ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAQAAAAAQAAAAQAAQAEAAESWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSFPVRRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPLQFQAQNGPNTSLASLL", "length": 587, "header": "tr|I3LGZ0-1|I3LGZ0_PIG Isoform 1 of MAU2 chromatid cohesion factor homolog OS=Sus scrofa OX=9823 GN=MAU2 PE=3 SV=4 CANONICAL=I3LGZ0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZUT4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0/entry#A0A286ZUT4-1", "sequence": { "sequence": "MAAQAAAAAQAAAAQAAQAEAAESWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQEQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSFPVRRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPLQFQAQNGPNTSLASLL", "length": 555, "header": "tr|A0A286ZUT4-1|I3LGZ0_PIG Computationally mapped isoform of MAU2 chromatid cohesion factor homolog OS=Sus scrofa OX=9823 GN=MAU2 PE=3 SV=1 CANONICAL=I3LGZ0-1" }, "locus": { "chromosome": "2", "start_pos": 58574196, "end_pos": 58540080, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046621.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046621.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035247.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035247.2" } ] } }, { "isoform_ac": "A0A4X1TZV4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0/entry#A0A4X1TZV4-1", "sequence": { "sequence": "MAAQAAAAAQAAAAQAAQAEAAESWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQEQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPLQFQAQNGPNTSLASLL", "length": 581, "header": "tr|A0A4X1TZV4-1|A0A4X1TZV4_PIG Computationally mapped isoform of MAU2 chromatid cohesion factor homolog OS=Sus scrofa OX=9823 GN=MAU2 PE=3 SV=1 CANONICAL=I3LGZ0-1" }, "locus": { "chromosome": "2", "start_pos": 58574196, "end_pos": 58540080, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056397.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056397.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032043.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032043.1" } ] } }, { "isoform_ac": "I3LGZ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0/entry#I3LGZ0-1", "sequence": { "sequence": "MAAQAAAAAQAAAAQAAQAEAAESWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSFPVRRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPLQFQAQNGPNTSLASLL", "length": 587, "header": "tr|I3LGZ0-1|I3LGZ0_PIG Isoform 1 of MAU2 chromatid cohesion factor homolog OS=Sus scrofa OX=9823 GN=MAU2 PE=3 SV=4 CANONICAL=I3LGZ0-1" }, "locus": { "chromosome": "2", "start_pos": 58574196, "end_pos": 58540080, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032349.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032349.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023334.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023334.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZUT4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUT4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2470946", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2470946", "resource": "Reactome", "description": "Cohesin Loading onto Chromatin" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" }, { "name": "SMC loading complex", "id": "GO:0032116", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032116", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" }, { "name": "Scc2-Scc4 cohesin loading complex", "id": "GO:0090694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090694", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "chromosome segregation", "id": "GO:0007059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007059", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" }, { "name": "mitotic sister chromatid cohesion", "id": "GO:0007064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007064", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" }, { "name": "maintenance of mitotic sister chromatid cohesion", "id": "GO:0034088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034088", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cohesin loader activity", "id": "GO:0061775", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061775", "evidence": [ { "database": "UniProtKB", "id": "I3LGZ0", "url": "https://www.uniprot.org/uniprotkb/I3LGZ0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 541, "end_pos": 543, "annotation": "n_glycosylation_sequon" }, { "start_pos": 580, "end_pos": 582, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGZ0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 587, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGZ0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGZ0" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 541, "end_pos": 543 }, { "start_pos": 580, "end_pos": 582 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"url": "https://www.uniprot.org/uniprotkb/ARBA00003348#function" }, { "database": "UniProtKB", "id": "I3LJI0", "url": "https://www.uniprot.org/uniprotkb/I3LJI0#function" }, { "database": "UniProtKB", "id": "PIRNR016013", "url": "https://www.uniprot.org/uniprotkb/PIRNR016013#function" }, { "database": "UniProtKB", "id": "A0A287ASF7", "url": "https://www.uniprot.org/uniprotkb/A0A287ASF7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LJI0", "url": "https://www.uniprot.org/uniprotkb/I3LJI0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RER1", "url": "https://www.uniprot.org/uniprotkb/I3LJI0", "locus": { "chromosome": "6", "start_pos": 64311783, "end_pos": 64301199, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026626", 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"https://www.uniprot.org/uniprotkb/A0A8W4FC57-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCH1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCH1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FII2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FII2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FII2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FII2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ58", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ58", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ58-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ58-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ83", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ83", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ83-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ83-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGF0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGNVWQVILWKEVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQNAVQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKDHTSPSFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRYVVVTVCLKAGLETMSWNKFSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVCLIQNVIWKSNTCSRTLLEVVREMESSRGQELDCSGQEFEFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1119, "header": "tr|I3LGF0-1|I3LGF0_PIG Isoform 1 of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=2 CANONICAL=I3LGF0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZW47-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A286ZW47-1", "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQVNMQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKGNFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAVSSTLCAFQGLVCTCSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRACYSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQVSLTAAGVLSGFDTAGFANRSLAVPARNVPCLGPWPGCDQCVPVQQEFEFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1075, "header": "tr|A0A286ZW47-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=2 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057253.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057253.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035903.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035903.2" } ] } }, { "isoform_ac": "A0A287A265-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A287A265-1", "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQVNMQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKGNFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIGNRHKECFFLNLVVHEGSLGGSTRTCDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRACYSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVSGFANRSLAVPARNVPCLGPWPGCDQCVPVQQEFEFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1063, "header": "tr|A0A287A265-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042573.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042573.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037839.1", "url": "https://www.ensembl.org/id/ENSSSCP00000037839.1" } ] } }, { "isoform_ac": "A0A287BIE0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A287BIE0-1", "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQVNMQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKGNFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNKTVTRFSNLLPFPSHLAQYVVVTVCLKAGLETMSWNKFSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVSGFANRSLAVPARNVPCLGPWPGCDQCVPVQQEFEFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1107, "header": "tr|A0A287BIE0-1|A0A287BIE0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061132.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061132.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056299.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056299.1" } ] } }, { "isoform_ac": "A0A8W4FBZ6-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A8W4FBZ6-1", "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQVNMQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKGNFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAVSSTLCAFQGLVCTCSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIGNRHKECFFLNLQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRACYSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQVSLTAAGVLSGFDTAGFANRSLAVPARNVPCLGPWPGCDQCVPVQQEFEFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1050, "header": "tr|A0A8W4FBZ6-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092560.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092560.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075817.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075817.1" } ] } }, { "isoform_ac": "A0A8W4FC57-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A8W4FC57-1", "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQNAVQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKDHTSPSFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRACYSVSMMFFFLQFSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVCLIQNVIWKSNTCSRTLLEVVREMESSRGQELDCSGQEFEFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1103, "header": "tr|A0A8W4FC57-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092419.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092419.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076843.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076843.1" } ] } }, { "isoform_ac": "A0A8W4FCH1-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A8W4FCH1-1", "sequence": { "sequence": "VFGDNKCCEKDKISLEKGHHFKTLLYPLLVFSDTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQNAVQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKDHTSPSFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRACYSVSMMFFFLQFSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVCLIQNVIWKSNTCSRTLLEVVREMESSRGQELDCSGFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1098, "header": "tr|A0A8W4FCH1-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3981672, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098288.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098288.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077098.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077098.1" } ] } }, { "isoform_ac": "A0A8W4FII2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A8W4FII2-1", "sequence": { "sequence": "SPSNPGSELSVWPAPQLTLRCAFLFTHSTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQNAVQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKDHTSPSFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRACYSVSMMFFFLQFSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVCLIQNVIWKSNTCSRTLLEVVREMESSRGQELDCSGFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1093, "header": "tr|A0A8W4FII2-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3982246, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092874.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092874.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079139.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079139.1" } ] } }, { "isoform_ac": "A0A8W4FJ58-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A8W4FJ58-1", "sequence": { "sequence": 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"length": 1095, "header": "tr|A0A8W4FJ58-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099340.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099340.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079358.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079358.1" } ] } }, { "isoform_ac": "A0A8W4FJ83-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#A0A8W4FJ83-1", "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQNAVQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKDHTSPSFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRACYSVSMMFFFLQFSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVCLIQNLCGVTQVMMQGGPSVPSFPLTPPWKSTSTAR", "length": 1033, "header": "tr|A0A8W4FJ83-1|I3LGF0_PIG Computationally mapped isoform of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=1 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3854724, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100885.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100885.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078954.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078954.1" } ] } }, { "isoform_ac": "I3LGF0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGF0/entry#I3LGF0-1", "sequence": { "sequence": "MGWRRPLQRTDVTKARTIYLNEPHRNSFCKNSISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLLIILVISGIKEIVEDYVSLLLLNAPNPTALGNVWQVILWKEVNVGDIVKATDGQFLPADVVLISSSQPQATCYVATSNLDGETNLKIRQALLETAEIQTEKQLSSLSGKIECEGPNCHFNNFIGTLYLNGKSPVSIGPDQVLLRGTQLKNTDWIFGIVVYTGFETKFMQNAVQSPLKRSRVEKVTNVQILVLFLMLLVMALVSCVGAAFWNGTYGENTWYIGKKDHTSPSFWFDILMFIILYHNLIPISLLVTLEIVKSIQAMFINWDEDMHYERNDVYAMARTSSLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIIYGDRPCPITESSEFSDPKLLENFEEDHPTKEYIKEFLFLLSVCHTVVPERDGNNISYQASSPDEAALVKGAKKLGFVFTARTPYSVTIEAMGEEFTFQILNVLEFSSNRKRMSVIVRTPTGQLRLYCKGADSVIYERLSEDSLFVKETLTHLESFAREGLRTLCIAYIDLTELEYQQWLAMYEEVCTVVQDRAQSLEHCYDTIEKKFLLLGATAIEDRLQARVPETIANLLKANIRIWLLTGDKEETAVNIAYSCKLLSGHMLHIQLNANSLEATQQMIDQNCQDLGALLGKENDLALIIDGKTLKHALHFEVKKSFLNLALSCRAVLCCRLSPLQKAEIVDLVKSHVRAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSHLEKLLLVHGAWSYFRVTKCVLYCFYKNVVLYIIELWFAFVNGFSGQILFERWCISLYNVIFTSLPTITLGIFEQCCSQESLLRYPQLYTISQTGDIFNIKVLWIQCINAFVHSFILFWLPTKMLKHGNSFIVSNICQRYVVVTVCLKAGLETMSWNKFSHLAIWGSILIWLVFFTVYSFFWPTIPISPEMTGQASMVLACPYFWLGFFLVPIVCLIQNVIWKSNTCSRTLLEVVREMESSRGQELDCSGQEFEFLSPECSLYALCALTASLCFALAGGYAFSQVEHAVISQEELVRSYDTTKSKTRRTFSTAFSESIFE", "length": 1119, "header": "tr|I3LGF0-1|I3LGF0_PIG Isoform 1 of Phospholipid-transporting ATPase OS=Sus scrofa OX=9823 GN=LOC100625134 PE=3 SV=2 CANONICAL=I3LGF0-1" }, "locus": { "chromosome": "11", "start_pos": 3984856, "end_pos": 3840492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028952.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028952.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023143.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023143.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZW47", "url": "https://www.uniprot.org/uniprotkb/A0A286ZW47" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1N0B2-1", "protein_name": "Phospholipid-transporting ATPase", "gene_name": "LOC536660", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGWRQSLQGADVPMGRTIYLNEPLRNAFCENSISTAKYSMWSFLPRYLYLQFSKTANAFFLFITILQQIPDVSPTGKYTTLVPLLVILVISGIKEIVEDYKRHMADKLVNSKNTIVLRQNAWQMILWKEVNVGDIVKATNGQFLPADMVLISSSEPQATCFVATSNLDGETNLKIRQALSETATMKTEKQLSNLSGKIKCEEPNFHFNSFAGTLYLNEKSPISIGPDQVLLRGTQLKNTEWILGIVVYTGFETKFMQNAVKSPLKRSKVEKVTNMQILVLFLLLLVMSLVSCVGAIYWKDRYRAEPWYIGKSDYDYHSFGFDLLVFIILYHNLIPISLLVTLEIVKYIQALFINWDEDMHFKGSNVYAMARTSNLNEELGQVEYLFSDKTGTLTCNVMTFKKCSIAGITYGDLSSKSDDGAKGLSQSPCFISDAYEFNDPALLQNFENDHPTKEYIKEFLTLLCVCHTVVPEREGNNISYQASSPDEAALVKGAKKLGFVFTTRMPNSVTIEAMGEELTFEILNVLEFSSNRKRMSIIVRTPEGRLRLYCKGADSVIYERLSENSLFVEETLVHLENFAKEGLRTLCVAYIDLTEIEYEQWLVMYKKAITVVKDRMKTLEDCYDSIEKKFLLLGATAIEDRLQARVPETITSLLKANIKIWVLTGDKQETAINIAYSCKLLSGQMPRIQLNANSLEATQQVISQNCQDLGALLGKENDLALIIDGKTLKYALHVEVRKCFLNLALSCRTVLCCRLSPLQKAEIVDVVKKQVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMLATNNSDYAIAQFSYLEKLLLVHGAWNYFRVTKCILYCFYKNVVLYIIELWFAIVNGFSGQIIFERWCISLYNVIFTSLPPFTLGIFERCCSQESLLRYPQLYRISQTGDIFNIKVLWIQCINAIVHSFILFWLPAKMLEHDMVLQSGYTTDYLFLGNFIYTYVVVTVCLKAGLETMSWNKFTHFAIWGSIMIWLGFFAVYSSLWPTVPVAPEMTGQGSMALVCPHFWLGFFIVPIVCLIQNVAWKSIRNTCHRTLLEEVREMESSGVQVLRRDSVQSFKVEEVNLQRSSSPRPCQVIFRNNSVDLGAPHGYAFSQVERAVISQEELVRSYDTTKNKPQKTFSSATLE", "length": 1151 }, "evidence": [ { "id": "I3LGF0", "url": "https://omabrowser.org/oma/group/I3LGF0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "phosphatidylserine floppase activity", "id": "GO:0090556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090556", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "ATPase-coupled intramembrane lipid transporter activity", "id": "GO:0140326", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140326", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "phospholipid transport", "id": "GO:0015914", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015914", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "phospholipid translocation", "id": "GO:0045332", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045332", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" }, { "name": "neuron development", "id": "GO:0048666", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048666", "evidence": [ { "database": "UniProtKB", "id": "I3LGF0", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 295, "end_pos": 297, "annotation": "n_glycosylation_sequon" }, { "start_pos": 459, "end_pos": 461, "annotation": "n_glycosylation_sequon" }, { "start_pos": 789, "end_pos": 791, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "38567", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phospho-L-serine(out) + ATP + H2O = a 1,2-diacyl-sn-glycero-3-phospho-L-serine(in) + ADP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "38567", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/38567" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGF0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1119, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGF0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGF0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" }, { "id": "PF16212", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16212" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "P-type ATPase C-terminal", "eco_id": "ECO_0000259", "start_pos": 789, "end_pos": 1023, "start_aa": "Asn", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGF0" }, { "id": "PF16209", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16209" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "P-type ATPase N-terminal", "eco_id": "ECO_0000259", "start_pos": 18, "end_pos": 81, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [ { "evidence": [ { "id": "A0A8W4FII2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FII2#function" }, { "id": "A0A8W4FII2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FII2" }, { "id": "PIRSR606539-3", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR606539-3" } ], "binding_site_uniprot": 368, "amino_acid": "Thr", "chebi_lig_id": "CHEBI_18420", "ligand": "Mg(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "", "eco_id": "ECO_0000256", "start_pos": 368, "end_pos": 368, "start_aa": "Thr", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZW47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZW47#function" }, { "id": "A0A286ZW47", "database": "UniProtKB", "url": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFK9-1", "uniprot_ac": "I3LFK9", "uniprot_id": "I3LFK9_PIG", "mass": { "chemical_mass": 79903.0, "monoisotopic_mass": 79903.0 }, "refseq": { "ac": "XP_020939805", "name": "transducin-like enhancer protein 2 isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939805" }, "gene_names": [ { "name": "TLE2", "type": "recommended", "evidence": [ { "id": "I3LFK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFK9" } ] }, { "name": "TLE2", "type": "synonym", "evidence": [ { "id": "XP_020939805", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939805" } ] } ], "protein_names": [ { "name": "TLE family member 2, transcriptional corepressor", "type": "synonym", "evidence": [ { "id": "I3LFK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFK9/entry#names_and_taxonomy" } ] }, { "name": "transducin-like enhancer protein 2 isoform X4", "type": "synonym", "evidence": [ { "id": "XP_020939805", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939805" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFK9", "url": "https://www.uniprot.org/uniprotkb/I3LFK9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TLE2", "url": "https://www.uniprot.org/uniprotkb/I3LFK9", "locus": { "chromosome": "2", "start_pos": 75536804, "end_pos": 75510004, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028995", "url": "https://www.ensembl.org/id/ENSSSCG00000028995" } ] } } ], "crossref": [ { "id": "ENSSSCG00000028995", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028995", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622728", "url": "https://www.ncbi.nlm.nih.gov/gene/100622728", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005617", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005617", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "AKDERNH", "url": "https://omabrowser.org/oma/group/AKDERNH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10814", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10814", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10814:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10814:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03920", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03920", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-201722", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-201722", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3769402", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3769402", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-4641265", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4641265", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020939805", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939805", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZYU0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYU0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYU0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEU5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEU5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QI39", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QI39-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QI39-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0B3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0B3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0B3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0B3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFK9", "url": "https://www.uniprot.org/uniprotkb/I3LFK9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFK9-1", "url": "https://www.uniprot.org/uniprotkb/I3LFK9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYPQGRHPTPLQSGQPFKFSILEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSGICAQIIPFLTQEHQQQVLQAVERAKQVTVGELNSLIGQQLQPLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAVAKEDRTGVEAEGSRVERALSRSVSPSPPESVVEEERPSGLGGNGKQRAEEKDLSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKAPVCIPARRDLVDSPASLASSLGSPLPRAKELVLNDLPASTPASKSCDSSPPEDASTPGPSSASHLRQLAAKPAPSTDSIALRSPLTLSSPFTTSFSLGSHSALNGDLSVPSSYVSLHLSPQVSGSVVYGRSPMMAFESHPHLRGSSISSSLPTIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISGNNKYIVTGSGDKKATVYEVVY", "length": 743, "header": "tr|I3LFK9-1|I3LFK9_PIG Isoform 1 of TLE family member 2, transcriptional corepressor OS=Sus scrofa OX=9823 GN=TLE2 PE=3 SV=3 CANONICAL=I3LFK9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZYU0-1", "url": "https://www.uniprot.org/uniprotkb/I3LFK9/entry#A0A286ZYU0-1", "sequence": { "sequence": "MTETEPMYPQGRHPTPLQSGQPFKFSILEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSGICAQIIPFLTQEHQQQVLQAVERAKQVTVGELNSLIGQQQLQPLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAVAKEDRTGVEAEGSRVERALSRSVSPSPPESVVEEERPSGLGGNGKQRAEEKDLSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKAPVCIPARRDLVDSPASLASSLGSPLPRAKELVLNDLPASTPASKSCDSSPPEDASTPGPSSASHLRQLAAKPAPSTDSIALRSPLTLSSPFTTSFSLGSHSALNGDLSVPSSYVSLHLSPQVSGSVVYGRSPMMAFESHPHLRGSSISSSLPTIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISGNNKYIVTGSGDKKATVYEVVY", "length": 750, "header": "tr|A0A286ZYU0-1|I3LFK9_PIG Computationally mapped isoform of TLE family member 2, transcriptional corepressor OS=Sus scrofa OX=9823 GN=TLE2 PE=3 SV=2 CANONICAL=I3LFK9-1" }, "locus": { "chromosome": "2", "start_pos": 75536626, "end_pos": 75510403, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058486.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058486.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036872.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036872.2" } ] } }, { "isoform_ac": "A0A5G2QEU5-1", "url": "https://www.uniprot.org/uniprotkb/I3LFK9/entry#A0A5G2QEU5-1", "sequence": { "sequence": "TPLQSGQPFKFSILEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSGICAQIIPFLTQEHQQQVLQAVERAKQVTVGELNSLIGQQQLQPLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAVAKEDRTGVEAEGSRVERALSRSVSPSPPESVVEEERPSGLGGNGKQRAEEKDLSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKAPVCIPARRDLVDSPASLASSLGSPLPRAKELVLNDLPASTPASKSCDSSPPEDASTPGPSSASHLRQLAAKPAPSTDSIALRSPLTLSSPFTTSFSLGSHSALNGDLSVPSSYVSLHLSPQVSGSVVYGRSPMMAFESHPHLRGSSISSSLPTIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLSLKFASCVQGVILCPEL", "length": 685, "header": "tr|A0A5G2QEU5-1|A0A5G2QEU5_PIG Computationally mapped isoform of TLE family member 2, transcriptional corepressor OS=Sus scrofa OX=9823 GN=TLE2 PE=3 SV=2 CANONICAL=I3LFK9-1" }, "locus": { "chromosome": "2", "start_pos": 75536550, "end_pos": 75515495, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084050.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084050.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063221.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063221.2" } ] } }, { "isoform_ac": "A0A5G2QI39-1", "url": "https://www.uniprot.org/uniprotkb/I3LFK9/entry#A0A5G2QI39-1", "sequence": { "sequence": "MGSFLPIRPDDRNGAVLESSGTPLQSGQPFKFSILEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSGICAQIIPFLTQEHQQQVLQAVERAKQVTVGELNSLIGSVSPSPPESVVEEERPSGLGGNGKQRAEEKDLSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKAPVCIPARRDLVDSPASLASSLGSPLPRAKELVLNDLPASTPASKSCDSSPPEDASTPGPSSASHLRQLAAKPAPSTDSIALRSPLTLSSPFTTSFSLGSHSALNGDLSVPSSYVSLHLSPQVSGSVVYGRSPMMAFESHPHLRGSSISSSLPTIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISGNNKYIVTGSGDKKATVYEVVY", "length": 689, "header": "tr|A0A5G2QI39-1|A0A5G2QI39_PIG Computationally mapped isoform of TLE family member 2, transcriptional corepressor OS=Sus scrofa OX=9823 GN=TLE2 PE=3 SV=2 CANONICAL=I3LFK9-1" }, "locus": { "chromosome": "2", "start_pos": 75536626, "end_pos": 75510375, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090253.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090253.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064070.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064070.2" } ] } }, { "isoform_ac": "A0A5G2R0B3-1", "url": "https://www.uniprot.org/uniprotkb/I3LFK9/entry#A0A5G2R0B3-1", "sequence": { "sequence": "MYPQGRHPTPLQSGQPFKFSILEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMAEIVKRLSGICAQIIPFLTQEHQQQVLQAVERAKQVTVGELNSLIGQQQLQPLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAVAKEDRTGVEAEGSRVERALSRSVSPSPPESVVEEERPSGLGGNGKQRAEEKDLSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKAPVCIPARRDLVDSPASLASSLGSPLPRAKELVLNDLPASTPASKSCDSSPPEDASTPGPSSASHLRQLAAKPAPSTDSIALRSPLTLSSPFTTSFSLGSHSALNGDLSVPSSYVSLHLSPQVSGSVVYGRSPMMAFESHPHLRGSSISSSLPTIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSHPWHMEVPGPGMESKLQLQPTPQLQQNWILNPLHQAGDPA", "length": 735, "header": "tr|A0A5G2R0B3-1|A0A5G2R0B3_PIG Computationally mapped isoform of TLE family member 2, transcriptional corepressor OS=Sus scrofa OX=9823 GN=TLE2 PE=3 SV=2 CANONICAL=I3LFK9-1" }, "locus": { "chromosome": "2", "start_pos": 75535715, "end_pos": 75515396, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070532.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070532.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067636.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067636.2" } ] } }, { "isoform_ac": "I3LFK9-1", "url": "https://www.uniprot.org/uniprotkb/I3LFK9/entry#I3LFK9-1", "sequence": { "sequence": "MYPQGRHPTPLQSGQPFKFSILEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSGICAQIIPFLTQEHQQQVLQAVERAKQVTVGELNSLIGQQLQPLSHHAPPVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAVAKEDRTGVEAEGSRVERALSRSVSPSPPESVVEEERPSGLGGNGKQRAEEKDLSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKAPVCIPARRDLVDSPASLASSLGSPLPRAKELVLNDLPASTPASKSCDSSPPEDASTPGPSSASHLRQLAAKPAPSTDSIALRSPLTLSSPFTTSFSLGSHSALNGDLSVPSSYVSLHLSPQVSGSVVYGRSPMMAFESHPHLRGSSISSSLPTIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSNVEILHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISGNNKYIVTGSGDKKATVYEVVY", "length": 743, "header": "tr|I3LFK9-1|I3LFK9_PIG Isoform 1 of TLE family member 2, transcriptional corepressor OS=Sus scrofa OX=9823 GN=TLE2 PE=3 SV=3 CANONICAL=I3LFK9-1" }, "locus": { "chromosome": "2", "start_pos": 75536626, "end_pos": 75515396, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031921.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031921.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022851.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022851.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZYU0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYU0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-201722", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-201722", "resource": "Reactome", "description": "Formation of the beta-catenin:TCF transactivating complex" }, { "id": "R-SSC-3769402", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3769402", "resource": "Reactome", "description": "Deactivation of the beta-catenin transactivating complex" }, { "id": "R-SSC-4641265", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4641265", "resource": "Reactome", "description": "Repression of WNT target genes" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K109-1", "protein_name": "TLE family member 2, transcriptional corepressor", "gene_name": 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"common_name": "Rat" }, { "uniprot_canonical_ac": "G5E510-1", "protein_name": "TLE family member 2, transcriptional corepressor", "gene_name": "TLE2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MMSRIYCCHRGASLEGRQRQDPRTRPAWNLDRQAPESWRRASWIGRMYPQGRHPTPLQSGQPFKFSILEICDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSGICAQIIPFLTQEHQQQVLQAVERAKQVTVGELNSLIGQQLQPLAHHAPAVPLTPRPAGLVGGSATGLLALSGALAAQAQLAAVTKEERAGVEAEGSRVERVPSRSVSPSPPESVVEEERPSGLGGNGKQRAEEKDLSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKAPTCIPARRDLVDSPASLASSLGSPLPRAKELVLNDLPASTPASKSCDSSPPQDASTPGPSSVSHLRQLAAKPAPSTDSIALRSPLTLSSPFSTSFSLGSHSVLNGDLSVPSSYVSLHLSPQASGSVVYGRSPMMAFESHPHLRGSSISSSLPTIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQHVYTGGKGCVKVWDVGQPGAKMPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVGMESSSVELLHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISGNNKYIVTGSGDKKATVYEVVY", "length": 789 }, "evidence": [ { "id": "I3LFK9", "url": "https://omabrowser.org/oma/group/I3LFK9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": 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"https://omabrowser.org/oma/group/I3LFK9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9WVB2-1", "protein_name": "Transducin-like enhancer protein 2", "gene_name": "Tle2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055355", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055355", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR14002", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14002", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14002:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14002:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00095", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00095", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00100", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00100", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07645", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A216", "url": "https://www.uniprot.org/uniprotkb/A0A287A216", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A216-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A216-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCQ4", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCQ4-1", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRTLGLALLALVSAVGQSQASGFTESGLSLLGYQLCNYSETRTVPSVEAAQTSRLTHVPCGGWIPWRRCPKTVYRTRYLAVDVLERRNVTRCCEGYEQLGLYCVRPRNRSSEFASRPGICPVVGPEVSTSPCTLDVDCPGLRKCCPVSGALVCTAPTPGAPERKLASFWYNLTVLVKMDFQELLQVDPRLLDHMRLLHSMVTGALQPLNATVHHLHSAGGDTSTTVSRLLLGLPQPVPVARVSTALDSMVKRVYEVIGVRVQDVNECSHDELNTCSGGEPCVNTEGSYHCARHPETPTLCPQKLDGTCEDCPPVPDHMIANVTSSSFHVSWSLNSTQNRPFQVRVYRGEELFRTASTRGTSLEVAGLEAGVLYRVQTGYQACGANVTNTLTVRTDARSFRVTMRILDRNVTERLLDRGSPEFQNFSRQLLHEVARSFPPAVSDLHRGGRLRMQIVSLQAGSVVVSLRLTVWDPEFPLGVATLAPMLPPLWASTVFQVDQQGTLVQDWDECADSLEHDCSPAAQCINLEGSYTCRCWTARDANPSRPGRACDGDAVSPPGGVLSPVTGVIAPAPGTETAAVGLETVALSPSPGHPWGTPAAGQAWTPGPPPRRGVSSMAGHGSDSTGQDVEEELPLDSTMEPLFWPMPTEGPTGHIEWQASLPTRDTLPAPLDPTWPQTLDPGATSQDLPLAPTPEPLKTSACAPVPIRRVTVSNVTSTGFRVAWTADLTPHPTFQLTLTSAQGPTVNLETRDASLVLSGLEPGTLHRVEIVAQACGKETARAHLKVRTAAQKLSGKVRIVNVRYLESFRNASSKEYRAFLELFLRTVRNSLPASMRQHLDTGGVQVEVTRISNGSVLVEFNVLVIADLDIREVAAAFLAAFQDASPLEVVAGDTFLWDYDECEREEHDCAPGSTCHNILGSFTCRCEGGAADPPVEYSGRPCEGDSPGNTTRSPTPERPPTPVGTWAPAAQGARPAPPGPPPRLNLSRAVRVLCETDKVAVAIQKRFLQQESIPESALYLGHPSCNVSDSNSTHVILVAAWSECGTVVQSNVTTTVVRTTLRNDLSPEGVLHHPKILSPIRCAFQNHLLTSSGYTPEWGVYTIIEDLHGAGRFVTEMQLFIGDSPIPQNYSVSASDDVKIEVGLYKQKSNLKVVLTECWATPSSNAKDPIMFGFINNSCPVPNTHTNVIENGNSDKAQVKLKIFSFINNSIVYLHCKLRICMESPGTTCKISCDDFRSPRSSGMSATHQMSWGPLIRSEGEPPGTEPGLGAGYLALIVVAVFALVAGTAALVLLSYQRMTGRYSFKTQPGAFSYQAFRE", "length": 1320, "header": "tr|I3LCQ4-1|I3LCQ4_PIG Isoform 1 of Uromodulin like 1 OS=Sus scrofa OX=9823 GN=UMODL1 PE=4 SV=3 CANONICAL=I3LCQ4-1" }, "isoforms": [ { "isoform_ac": "A0A287A216-1", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4/entry#A0A287A216-1", "sequence": { "sequence": "MLRTLGLALLALVSAVGQSQASGFTESGLSLLGYQLCNYSETRTVPSVEAAQTSRLTHVPCGGWIPWRRCPKTVYRTRYLAVDVLERRNVTRCCEGYEQLGLYCVRPRNRSSEFASRPGICPVVGPEVSTSPCTLDVDCPGLRKCCPVSGALVCTAPTPGAPERKLASFWYNLTVLVKMDFQELLQVDPRLLDHMRLLHSMVTGALQPLNATVHHLHSAGGDTSTTVSRLLLGLPQPVPVARVSTALDSMVKRVYEVIGVRVQDVNECSHDELNTCSGGEPCVNTEGSYHCARHPETPTLCPQKLDGTCEDCPPVPDHMIANVTSSSFHVSWSLNSTQNRPFQVRVYRGEELFRTASTRGTSLEVAGLEAGVLYRVQTGYQACGANVTNTLTVRTDARSFRVTMRILDRNVTERLLDRGSPEFQNFSRQLLHEVARSFPPAVSDLHRGGRLRMQIVSLQAGSVVVSLRLTVWDPEFPLGVATLAPMLPPLWASTVFQVDQQGTLVQDWDECADSLEHDCSPAAQCINLEGSYTCRCWTARDANPSRPGRACDGDAVSPPGGVLSPVTGVIAPAPGTETAAVGLETVALSPSPGHPWGTPAAGQAWTPGPPPRRGVSSMAGHGSDSTGQDVEEEVPSVAPGLGAGQGGQGVAGTAFSPRAPGATDSLPGPPGMLPLDSTMEPLFWPMPTEGPTGHIEWQASLPTRDTLPAPLDPTWPQTLDPGATSQDLPLAPTPEPLKTSACAPVPIRRVTVSNVTSTGFRVAWTADLTPHPTFQLTLTSAQGPTVNLETRDASLVLSGLEPGTLHRVEIVAQACGKETARAHLKVRTAAQKLSGKVRIVNVRYLESFRNASSKEYRAFLELFLRTVRNSLPASMRQHLDTGGVQVEVTRISNGSVLVEFNVLVIADLDIREVAAAFLAAFQDASPLEVVAGDTFLWDYDECEREEHDCAPGSTCHNILGSFTCRCEGGAADPPVEYSGRPCEGDSPGNTTRSPTPERPPTPVGTWAPAAQGARPAPPGPPPRLNLSRAVRVLCETDKVAVAIQKRFLQQESIPESALYLGHPSCNVSDSNSTHVILVAAWSECGTVVQSNVTTTVVRTTLRNDLSPEGVLHHPKILSPIRCAFQNHLLTSSGYTPEWGVYTIIEDLHGAGRFVTEMQLFIGDSPIPQNYSVSASDDVKIEVGLYKQKSNLKVVLTECWATPSSNAKDPIMFGFINNSCPVPNTHTNVIENGNSDKAQVKLKIFSFINNSIVYLHCKLRICMESPGTTCKISCDDFRSPRSSGMSATHQMSWGPLIRSEGEPPGTEPGLGAGYLALIVVAVFALVAGTAALVLLSYQRMTGRYSFKTQPGAFSYQAFRE", "length": 1359, "header": "tr|A0A287A216-1|I3LCQ4_PIG Computationally mapped isoform of Uromodulin like 1 OS=Sus scrofa OX=9823 GN=UMODL1 PE=4 SV=2 CANONICAL=I3LCQ4-1" }, "locus": { "chromosome": "13", "start_pos": 205491610, "end_pos": 205425454, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039042.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039042.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037973.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037973.2" } ] } }, { "isoform_ac": "I3LCQ4-1", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4/entry#I3LCQ4-1", "sequence": { "sequence": "MLRTLGLALLALVSAVGQSQASGFTESGLSLLGYQLCNYSETRTVPSVEAAQTSRLTHVPCGGWIPWRRCPKTVYRTRYLAVDVLERRNVTRCCEGYEQLGLYCVRPRNRSSEFASRPGICPVVGPEVSTSPCTLDVDCPGLRKCCPVSGALVCTAPTPGAPERKLASFWYNLTVLVKMDFQELLQVDPRLLDHMRLLHSMVTGALQPLNATVHHLHSAGGDTSTTVSRLLLGLPQPVPVARVSTALDSMVKRVYEVIGVRVQDVNECSHDELNTCSGGEPCVNTEGSYHCARHPETPTLCPQKLDGTCEDCPPVPDHMIANVTSSSFHVSWSLNSTQNRPFQVRVYRGEELFRTASTRGTSLEVAGLEAGVLYRVQTGYQACGANVTNTLTVRTDARSFRVTMRILDRNVTERLLDRGSPEFQNFSRQLLHEVARSFPPAVSDLHRGGRLRMQIVSLQAGSVVVSLRLTVWDPEFPLGVATLAPMLPPLWASTVFQVDQQGTLVQDWDECADSLEHDCSPAAQCINLEGSYTCRCWTARDANPSRPGRACDGDAVSPPGGVLSPVTGVIAPAPGTETAAVGLETVALSPSPGHPWGTPAAGQAWTPGPPPRRGVSSMAGHGSDSTGQDVEEELPLDSTMEPLFWPMPTEGPTGHIEWQASLPTRDTLPAPLDPTWPQTLDPGATSQDLPLAPTPEPLKTSACAPVPIRRVTVSNVTSTGFRVAWTADLTPHPTFQLTLTSAQGPTVNLETRDASLVLSGLEPGTLHRVEIVAQACGKETARAHLKVRTAAQKLSGKVRIVNVRYLESFRNASSKEYRAFLELFLRTVRNSLPASMRQHLDTGGVQVEVTRISNGSVLVEFNVLVIADLDIREVAAAFLAAFQDASPLEVVAGDTFLWDYDECEREEHDCAPGSTCHNILGSFTCRCEGGAADPPVEYSGRPCEGDSPGNTTRSPTPERPPTPVGTWAPAAQGARPAPPGPPPRLNLSRAVRVLCETDKVAVAIQKRFLQQESIPESALYLGHPSCNVSDSNSTHVILVAAWSECGTVVQSNVTTTVVRTTLRNDLSPEGVLHHPKILSPIRCAFQNHLLTSSGYTPEWGVYTIIEDLHGAGRFVTEMQLFIGDSPIPQNYSVSASDDVKIEVGLYKQKSNLKVVLTECWATPSSNAKDPIMFGFINNSCPVPNTHTNVIENGNSDKAQVKLKIFSFINNSIVYLHCKLRICMESPGTTCKISCDDFRSPRSSGMSATHQMSWGPLIRSEGEPPGTEPGLGAGYLALIVVAVFALVAGTAALVLLSYQRMTGRYSFKTQPGAFSYQAFRE", "length": 1320, "header": "tr|I3LCQ4-1|I3LCQ4_PIG Isoform 1 of Uromodulin like 1 OS=Sus scrofa OX=9823 GN=UMODL1 PE=4 SV=3 CANONICAL=I3LCQ4-1" }, "locus": { "chromosome": "13", "start_pos": 205491610, "end_pos": 205425454, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023123.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023123.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021831.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021831.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 158, "start_aa": "Thr", "end_pos": 158, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr158", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 649, "start_aa": "Thr", "end_pos": 649, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr649", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 694, "start_aa": "Thr", "end_pos": 694, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr694", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A216", "url": "https://www.uniprot.org/uniprotkb/A0A287A216" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LCQ4", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" } ], "pmid": "" }, { "name": "external side of plasma membrane", "id": "GO:0009897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009897", "evidence": [ { "database": "UniProtKB", "id": "I3LCQ4", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "I3LCQ4", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" } ], "pmid": "" }, { "name": "cell periphery", "id": "GO:0071944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071944", "evidence": [ { "database": "UniProtKB", "id": "I3LCQ4", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "peptidase inhibitor activity", "id": "GO:0030414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030414", "evidence": [ { "database": "UniProtKB", "id": "I3LCQ4", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "I3LCQ4", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1027, "end_pos": 1029, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1032, "end_pos": 1034, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1052, "end_pos": 1054, "annotation": "n_glycosylation_sequon" }, { "start_pos": 109, "end_pos": 111, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1130, "end_pos": 1132, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1177, "end_pos": 1179, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1209, "end_pos": 1211, "annotation": "n_glycosylation_sequon" }, { "start_pos": 172, "end_pos": 174, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" }, { "start_pos": 322, "end_pos": 324, "annotation": "n_glycosylation_sequon" }, { "start_pos": 335, "end_pos": 337, "annotation": "n_glycosylation_sequon" }, { "start_pos": 386, "end_pos": 388, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" }, { "start_pos": 410, "end_pos": 412, "annotation": "n_glycosylation_sequon" }, { "start_pos": 425, "end_pos": 427, "annotation": "n_glycosylation_sequon" }, { "start_pos": 715, "end_pos": 717, "annotation": "n_glycosylation_sequon" }, { "start_pos": 811, "end_pos": 813, "annotation": "n_glycosylation_sequon" }, { "start_pos": 854, "end_pos": 856, "annotation": "n_glycosylation_sequon" }, { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" }, { "start_pos": 950, "end_pos": 952, "annotation": "n_glycosylation_sequon" }, { "start_pos": 986, "end_pos": 988, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LCQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" }, { "id": "PS50026", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50026" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EGF-like", "eco_id": "ECO_0000259", "start_pos": 507, "end_pos": 552, "start_aa": "Asp", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LCQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" }, { "id": "PS51041", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51041" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EMI", "eco_id": "ECO_0000259", "start_pos": 33, "end_pos": 106, "start_aa": "Gly", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LCQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" }, { "id": "PS50853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 707, "end_pos": 793, "start_aa": "Pro", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LCQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" }, { "id": "PS50024", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50024" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SEA", "eco_id": "ECO_0000259", "start_pos": 396, "end_pos": 510, "start_aa": "Asp", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LCQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" }, { "id": "PS51390", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51390" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "WAP", "eco_id": "ECO_0000259", "start_pos": 114, "end_pos": 158, "start_aa": "Phe", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LCQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCQ4" }, { "id": "PS51034", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51034" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ZP", "eco_id": "ECO_0000259", "start_pos": 994, "end_pos": 1241, "start_aa": "Leu", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 158, 649, 694 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1027, "end_pos": 1029 }, { "start_pos": 1032, "end_pos": 1034 }, { "start_pos": 1052, "end_pos": 1054 }, { "start_pos": 109, "end_pos": 111 }, { "start_pos": 1130, "end_pos": 1132 }, { "start_pos": 1177, "end_pos": 1179 }, { "start_pos": 1209, "end_pos": 1211 }, { "start_pos": 172, "end_pos": 174 }, { "start_pos": 210, "end_pos": 212 }, { "start_pos": 322, "end_pos": 324 }, { "start_pos": 335, "end_pos": 337 }, { "start_pos": 386, "end_pos": 388 }, { "start_pos": 38, "end_pos": 40 }, { "start_pos": 410, "end_pos": 412 }, { "start_pos": 425, "end_pos": 427 }, { "start_pos": 715, "end_pos": 717 }, { "start_pos": 811, "end_pos": 813 }, { "start_pos": 854, "end_pos": 856 }, { "start_pos": 89, "end_pos": 91 }, { "start_pos": 950, "end_pos": 952 }, { "start_pos": 986, "end_pos": 988 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LIY8-1", "uniprot_ac": "I3LIY8", "uniprot_id": "I3LIY8_PIG", "mass": { "chemical_mass": 84608.0, "monoisotopic_mass": 84608.0 }, "refseq": { "ac": "XP_005670775", "name": "ARF GTPase-activating protein GIT2 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670775" }, "gene_names": [ { "name": "GIT2", "type": "recommended", "evidence": [ { "id": "I3LIY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIY8" } ] }, { "name": "GIT2", "type": "synonym", "evidence": [ { "id": "XP_005670775", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670775" } ] } ], "protein_names": [ { "name": "ARF GTPase-activating protein GIT2 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005670775", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670775" } ] }, { "name": "GIT ArfGAP 2", "type": "synonym", "evidence": [ { "id": "I3LIY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LIY8", "url": "https://www.uniprot.org/uniprotkb/I3LIY8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GIT2", "url": "https://www.uniprot.org/uniprotkb/I3LIY8", "locus": { "chromosome": "14", "start_pos": 41051902, "end_pos": 40995988, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009925", "url": "https://www.ensembl.org/id/ENSSSCG00000009925" } ] } } ], "crossref": [ { "id": "I3LIY8", "url": "https://alphafold.ebi.ac.uk/entry/I3LIY8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000009925", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009925", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08847", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08847", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100154195", "url": "https://www.ncbi.nlm.nih.gov/gene/100154195", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013724", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013724", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022018", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022018", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032352", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032352", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037278", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037278", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038508", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038508", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047161", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047161", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154195", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154195", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A772", "url": "https://www.orthodb.org/?gene=A0A287A772", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287AM96", "url": "https://www.orthodb.org/?gene=A0A287AM96", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287ASN2", "url": "https://www.orthodb.org/?gene=A0A287ASN2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287BE33", "url": "https://www.orthodb.org/?gene=A0A287BE33", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1RIT6", "url": "https://www.orthodb.org/?gene=F1RIT6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LIY8", "url": "https://www.orthodb.org/?gene=I3LIY8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46097", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46097", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46097:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46097:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01412", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01412", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08518", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08518", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12205", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12205", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16559", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16559", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013404", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013404", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013406", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013406", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013420", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013420", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013423", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013423", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013424", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013424", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005670775", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670775", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A3Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287A3Z9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A3Z9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A3Z9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A772", "url": "https://www.uniprot.org/uniprotkb/A0A287A772", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A772-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A772-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AM96", "url": "https://www.uniprot.org/uniprotkb/A0A287AM96", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AM96-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AM96-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASN2", "url": "https://www.uniprot.org/uniprotkb/A0A287ASN2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASN2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ASN2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BE33", "url": "https://www.uniprot.org/uniprotkb/A0A287BE33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BE33-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BE33-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8A1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8A1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8A1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8A1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RIT6", "url": "https://www.uniprot.org/uniprotkb/F1RIT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RIT6-1", "url": "https://www.uniprot.org/uniprotkb/F1RIT6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIY8", "url": "https://www.uniprot.org/uniprotkb/I3LIY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIY8-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKSLDSDLSDGPVTVQEFMEVKNALVASEAKIQQLMKVNNNLSDELRIMQKKLQTLQSENSNLRKQATTNIYQVQTGSEYTDTSNHSSLKRRPSARGSRPMSMYETGSGQKPYLPMGEVNHPEESRTRLQPFPSHIGRSALVTSSSSLPSFPSTLSWSRDESARRASRLEKQNSTPESDYDNTPNDRDLDDMGSSRKGRQRSMVWHSDGSGPDTTEPPAAPSPVLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALFPKKPKSDMVRTSLRLLTSSAYRLQSECKKTLPGDPGPPTDIQLVTQQVIQCAYDIAKAAKQLVTITTKENNN", "length": 759, "header": "tr|I3LIY8-1|I3LIY8_PIG Isoform 1 of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=4 CANONICAL=I3LIY8-1" }, "isoforms": [ { "isoform_ac": "A0A287A3Z9-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#A0A287A3Z9-1", "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADRRLSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKLQTLQSENSNLRKQATTNIYQVQTGSEYTDTSNHSSLKRRPSARGSRPMSMYETGSGQKPYLPMGEVNHPEESRTRLQPFPSHASRLEKQNSTPESDYDNTPNDRDLDDMGSSRKGRQRSMVWHSDGSGPDTTEPPAAPSPVLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALFPKKPKSDMVRTSLRLLTSSAYRLQSECKKTLPGDPGPPTDIQLVTQQVIQCAYDIAKAAKQLVTITTKENNN", "length": 681, "header": "tr|A0A287A3Z9-1|I3LIY8_PIG Computationally mapped isoform of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=2 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41048862, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038375.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038375.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038696.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038696.2" } ] } }, { "isoform_ac": "A0A287A772-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#A0A287A772-1", "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKSLDSDLSDGPVTVQEFMEVKNALVASEAKIQQLMKVNNNLSDELRIMQKKLQTLQSENSNLRKQATTNIYQVQTGSEYTDTSNHSSLKRRPSARGSRPMSMYETGSGQKPYLPMGEVNHPEESRTRLQPFPSHASRLEKQNSTPESDYDNTPNDRDLDDMGSSRKGRQRSMVWHSDGSGPDTTEPPAAPSPVLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALFPKKPKSDMVRTSLRLLTSSAYRLQSECKKTLPGDPGPPTDIQLVTQQVIQCAYDIAKAAKQLVTITTKENNN", "length": 729, "header": "tr|A0A287A772-1|I3LIY8_PIG Computationally mapped isoform of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=1 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41048862, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037310.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037310.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039664.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039664.1" } ] } }, { "isoform_ac": "A0A287AM96-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#A0A287AM96-1", "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKIGRSALVTSSSSLPSFPSTLSWSRDESARRASRLEKQNSTPESDYDNTPNDRDLDDMGSSRKGRQRSMVWHSDGSGPDTTEPPAAPSPVLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALFPKKPKSDMVRTSLRLLTSSAYRLQSECKKTLPGDPGPPTDIQLVTQQVIQCAYDIAKAAKQLVTITTKENNN", "length": 626, "header": "tr|A0A287AM96-1|A0A287AM96_PIG Computationally mapped isoform of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=2 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41048862, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054131.3", "url": 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"tr|A0A287ASN2-1|A0A287ASN2_PIG Computationally mapped isoform of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=2 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41048862, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059201.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059201.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047090.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047090.2" } ] } }, { "isoform_ac": "A0A287BE33-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#A0A287BE33-1", "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKASRLEKQNSTPESDYDNTPNDRDLDDMGSSRKGRQRSMVWHSDGSGPDTTEPPAAPSPVLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALFPKKPKSDMVRTSLRLLTSSAYRLQSECKKTLPGDPGPPTDIQLVTQQVIQCAYDIAKAAKQLVTITTKENNN", "length": 596, "header": "tr|A0A287BE33-1|A0A287BE33_PIG Computationally mapped isoform of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=1 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41048862, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040343.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040343.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054804.1", "url": "https://www.ensembl.org/id/ENSSSCP00000054804.1" } ] } }, { "isoform_ac": "A0A5G2Q8A1-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#A0A5G2Q8A1-1", "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKSLDSDLSDGPVTVQEFMEVNNNLSDELRIMQKKLQTLQSENSNLRKQATTNIYQVQTGSEYTDTSNHSSLKRRPSARGSRPMSMYETGSGQKPYLPMGEVNHPEESRTRLQPFPSHASRLEKQNSTPESDYDNTPNDRDLDDMGSSRKGRQRSMVWHSDGSGPDTTEPPAAPSPVLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALFPKKPKSDMVRTSLRLLTSSAYRLQSECKKTLPGDPGPPTDIQLVTQQVIQCAYDIAKAAKQLVTITTKENNN", "length": 712, "header": "tr|A0A5G2Q8A1-1|A0A5G2Q8A1_PIG Computationally mapped isoform of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=1 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41048862, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082984.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082984.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060086.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060086.1" } ] } }, { "isoform_ac": "F1RIT6-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#F1RIT6-1", "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKSLDSDLSDGPVTVQEFMEVKNALVASEAKIQQLMKVNNNLSDELRIMQKKLLGNDAN", "length": 471, "header": "tr|F1RIT6-1|F1RIT6_PIG Computationally mapped isoform of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=3 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41033938, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010876.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010876.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010591.3", "url": "https://www.ensembl.org/id/ENSSSCP00000010591.3" } ] } }, { "isoform_ac": "I3LIY8-1", "url": "https://www.uniprot.org/uniprotkb/I3LIY8/entry#I3LIY8-1", "sequence": { "sequence": "MSKRLRSSEVCADCSGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASILSGRRKANPQDKVHPNKAEFIKAKYQMLAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTPVDYARQGGHHELAERLVEIQYELTDRLAFYLCGRKPDHKNGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSGSKDNVELILKTISNQHSIESQDNDQPDYDSVASDEETDLEATASKAHRQKSLDSDLSDGPVTVQEFMEVKNALVASEAKIQQLMKVNNNLSDELRIMQKKLQTLQSENSNLRKQATTNIYQVQTGSEYTDTSNHSSLKRRPSARGSRPMSMYETGSGQKPYLPMGEVNHPEESRTRLQPFPSHIGRSALVTSSSSLPSFPSTLSWSRDESARRASRLEKQNSTPESDYDNTPNDRDLDDMGSSRKGRQRSMVWHSDGSGPDTTEPPAAPSPVLPSTEDVIRKTEQITKNIQELLRAAQENKHDSYIPCSERIHVAVTEMAALFPKKPKSDMVRTSLRLLTSSAYRLQSECKKTLPGDPGPPTDIQLVTQQVIQCAYDIAKAAKQLVTITTKENNN", "length": 759, "header": "tr|I3LIY8-1|I3LIY8_PIG Isoform 1 of GIT ArfGAP 2 OS=Sus scrofa OX=9823 GN=GIT2 PE=4 SV=4 CANONICAL=I3LIY8-1" }, "locus": { "chromosome": "14", "start_pos": 41048862, "end_pos": 40996143, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028929.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028929.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024045.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024045.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A3Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287A3Z9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154195", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154195", "resource": "KEGG Pathway" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" }, { "id": "R-SSC-9013404", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013404", "resource": "Reactome", "description": "RAC2 GTPase cycle" }, { "id": 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{ "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LIY8", "url": "https://www.uniprot.org/uniprotkb/I3LIY8" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "I3LIY8", "url": "https://www.uniprot.org/uniprotkb/I3LIY8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "brain development", "id": "GO:0007420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007420", "evidence": [ { "database": "UniProtKB", "id": "I3LIY8", "url": "https://www.uniprot.org/uniprotkb/I3LIY8" } ], "pmid": "" }, { "name": "regulation of ARF protein signal transduction", "id": "GO:0032012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032012", "evidence": [ { "database": "UniProtKB", "id": "I3LIY8", "url": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LAT6-1", "uniprot_ac": "I3LAT6", "uniprot_id": "I3LAT6_PIG", "mass": { "chemical_mass": 144554.0, "monoisotopic_mass": 144554.0 }, "refseq": {}, "gene_names": [ { "name": "IARS1", "type": "recommended", "evidence": [ { "id": "I3LAT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ] } ], "protein_names": [ { "name": "Isoleucine--tRNA ligase, cytoplasmic", "type": "recommended", "evidence": [ { "id": "I3LAT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#names_and_taxonomy" } ] }, { "name": "6.1.1.5", "type": "synonym", "evidence": [ { "id": "I3LAT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#names_and_taxonomy" } ] }, { "name": "Isoleucyl-tRNA synthetase", "type": "synonym", "evidence": [ { "id": "I3LAT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA.", "evidence": [ { "database": "UniProtKB", "id": "F1SUF6", "url": "https://www.uniprot.org/uniprotkb/F1SUF6#function" }, { "database": "UniProtKB", "id": "ARBA00003170", "url": "https://www.uniprot.org/uniprotkb/ARBA00003170#function" }, { "database": "UniProtKB", "id": "I3LKK0", "url": "https://www.uniprot.org/uniprotkb/I3LKK0#function" }, { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IARS1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6", "locus": { "chromosome": "3", "start_pos": 41945770, "end_pos": 42022760, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008068", "url": "https://www.ensembl.org/id/ENSSSCG00000008068" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008068", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008068", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00818", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00818", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd07961", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07961", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002300", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002301", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002301", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009080", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009080", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013155", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013155", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014729", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014729", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023586", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023586", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033709", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033709", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057033", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057033", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EIIVIHK", "url": "https://omabrowser.org/oma/group/EIIVIHK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LAT6", "url": "https://www.orthodb.org/?gene=I3LAT6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR42780", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42780", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR42780:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42780:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00133", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00133", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08264", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08264", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19302", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19302", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23567", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23567", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9856649", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9856649", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "11060", "url": "https://www.rhea-db.org/rhea/11060", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A4W5", "url": "https://www.uniprot.org/uniprotkb/A0A287A4W5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A4W5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4W5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AKF4", "url": "https://www.uniprot.org/uniprotkb/A0A287AKF4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AKF4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AKF4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AL72", "url": "https://www.uniprot.org/uniprotkb/A0A287AL72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AL72-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AL72-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3E7", "url": "https://www.uniprot.org/uniprotkb/A0A287B3E7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3E7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3E7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUF6", "url": "https://www.uniprot.org/uniprotkb/F1SUF6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUF6-1", "url": "https://www.uniprot.org/uniprotkb/F1SUF6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAT6-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKK0", "url": "https://www.uniprot.org/uniprotkb/I3LKK0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKK0-1", "url": "https://www.uniprot.org/uniprotkb/I3LKK0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSVRDKDTLSIHYLMLPHVREELIDKKTESAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALDEIKSLEKYIIEELNVRKVTLSTDKNKYGIHLRAEPDHMVLGKRLKGAFKMVMTSIKQLSSEELEWFQESGTIVVEGHELHEEDIRLMYTFDQAAGGTTQFEAHSDAQVLVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGEYLNNVIKSHTEFIFATIKAPLKPYPVPTSDKILIQEKMQLKGSDLEVTLTRGSSMPAPACAYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFEVKNMELSVFHGETEIKNQTNLMSLSGKTLCVTSGSAPSVIDSPSTLLCQYINLQLLNADPQGCLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLDETQTEEITEETPMKTLNTKTVYVAVLPTTADL", "length": 1262, "header": "tr|I3LAT6-1|I3LAT6_PIG Isoform 1 of Isoleucine--tRNA ligase, cytoplasmic OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=3 CANONICAL=I3LAT6-1" }, "isoforms": [ { "isoform_ac": "A0A287A4W5-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#A0A287A4W5-1", "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSVRDKDTLSIHYLMLPHVREELIDKKTESAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALDEIKSLEKYIIEELNVRKVTLSTDKNKYGIHLRAEPDHMVLGKRLKGAFKMVMTSIKQLSSEELEWFQESGTIVVEGHELHEEDIRLMYTFDQAAGGTTQFEAHSDAQVLVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGEYLNNVIKSHTEFIFATIKAPLKPYPVPTSDKILIQEKMQLKGSDLEVTLTRGSSMPAPACAYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFEVKNMELSVFHGETEIKNQTNLMSLSGKTLCVTSGSAPSVIDSPSTLLCQYINLQLLNADPQGCLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLDETQTEEITEETPMKTLNTKTVYVAVLPTTADL", "length": 1222, "header": "tr|A0A287A4W5-1|I3LAT6_PIG Computationally mapped isoform of Isoleucine--tRNA ligase, cytoplasmic OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=2 CANONICAL=I3LAT6-1" }, "locus": { "chromosome": "3", "start_pos": 42012678, "end_pos": 41946740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043998.2", "url": "https://www.ensembl.org/id/ENSSSCT00000043998.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039009.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039009.2" } ] } }, { "isoform_ac": "A0A287AKF4-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#A0A287AKF4-1", "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYCIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSVRDKDTLSIHYLMLPHVREELIDKKTESAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALDEIKSLEKYIIEELNVRKVTLSTDKNKYGIHLRAEPDHMVLGKRLKGAFKMVMTSIKQLSSEELEWFQESGTIVVEGHELHEEDIRLMYTFDQAAGGTTQFEAHSDAQVLVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGEYLNNVIKSHTEFIFATIKAPLKPYPVPTSDKILIQEKMQLKGSDLEVTLTRGSSMPAPACAYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFEVKNMELSVFHGETEIKNQTNLMSLSGKTLCVTSGSAPSVIDSPSTLLCQYINLQLLNADPQGCLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLDETQTEEITEETPMKTLNTKTVYVAVLPTTADL", "length": 1195, "header": "tr|A0A287AKF4-1|A0A287AKF4_PIG Computationally mapped isoform of isoleucine--tRNA ligase OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=1 CANONICAL=I3LAT6-1" }, "locus": { "chromosome": "3", "start_pos": 42012678, "end_pos": 41946740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043795.2", "url": "https://www.ensembl.org/id/ENSSSCT00000043795.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044376.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044376.2" } ] } }, { "isoform_ac": "A0A287AL72-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#A0A287AL72-1", "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKVWVMVL", "length": 678, "header": "tr|A0A287AL72-1|A0A287AL72_PIG Computationally mapped isoform of Isoleucine--tRNA ligase, cytoplasmic OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=2 CANONICAL=I3LAT6-1" }, "locus": { "chromosome": "3", "start_pos": 42012678, "end_pos": 41980330, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040669.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040669.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044649.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044649.2" } ] } }, { "isoform_ac": "A0A287B3E7-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#A0A287B3E7-1", "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGCDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSVRDKDTLSIHYLMLPHVREELIDKKTESAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALDEIKSLEKYIIEELNVRKVTLSTDKNKYGIHLRAEPDHMVLGKRLKGAFKMVMTSIKQLSSEELEWFQESGTIVVEGHELHEEDIRLMYTFDQAAGGTTQFEAHSDAQVLVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGEYLNNVIKSHTEFIFATIKAPLKPYPVPTSDKILIQEKMQLKGSDLEVTLTRGSSMPAPACAYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFEVKNMELSVFHGETEIKNQTNLMSLSGKTLCVTSGSAPSVIDSPSTLLCQYINLQLLNADPQGCLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLDETQTEEITEETPMKTLNTKTVYVAVLPTTADL", "length": 1233, "header": "tr|A0A287B3E7-1|A0A287B3E7_PIG Computationally mapped isoform of isoleucine--tRNA ligase OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=1 CANONICAL=I3LAT6-1" }, "locus": { "chromosome": "3", "start_pos": 42012678, "end_pos": 41946740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040156.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040156.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050792.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050792.1" } ] } }, { "isoform_ac": "F1SUF6-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#F1SUF6-1", "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSVRDKDTLSIHYLMLPHVREELIDKKTESAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALDEIKSLEKYIIEELNVRKVTLSTDKNKYGIHLRAEPDHMVLGKRLKGAFKMVMTSIKQLSSEELEWFQESGTIVVEGHELHEEDIRLMYTFDQAAGGTTQFEAHSDAQVLVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGEYLNNVIKSHTEFIFATIKAPLKPYPVPTSDKILIQEKMQLKGSDLEVTLTRGSSMPAPACAYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFEVKNMELSVFHGETEIKNQTNLMSLSGKTLCVTSGSAPSVIDSPSTLLCQYINLQLLNADPQGCLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLDETQTEGEIIEHEKKIPKKTPAPR", "length": 1253, "header": "tr|F1SUF6-1|F1SUF6_PIG Computationally mapped isoform of Isoleucine--tRNA ligase, cytoplasmic OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=5 CANONICAL=I3LAT6-1" }, "locus": { "chromosome": "3", "start_pos": 42012678, "end_pos": 41951263, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008841.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008841.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008617.5", "url": "https://www.ensembl.org/id/ENSSSCP00000008617.5" } ] } }, { "isoform_ac": "I3LAT6-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#I3LAT6-1", "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSVRDKDTLSIHYLMLPHVREELIDKKTESAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALDEIKSLEKYIIEELNVRKVTLSTDKNKYGIHLRAEPDHMVLGKRLKGAFKMVMTSIKQLSSEELEWFQESGTIVVEGHELHEEDIRLMYTFDQAAGGTTQFEAHSDAQVLVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGEYLNNVIKSHTEFIFATIKAPLKPYPVPTSDKILIQEKMQLKGSDLEVTLTRGSSMPAPACAYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFEVKNMELSVFHGETEIKNQTNLMSLSGKTLCVTSGSAPSVIDSPSTLLCQYINLQLLNADPQGCLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLDETQTEEITEETPMKTLNTKTVYVAVLPTTADL", "length": 1262, "header": "tr|I3LAT6-1|I3LAT6_PIG Isoform 1 of Isoleucine--tRNA ligase, cytoplasmic OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=3 CANONICAL=I3LAT6-1" }, "locus": { "chromosome": "3", "start_pos": 42012678, "end_pos": 41946740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027044.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027044.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021154.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021154.3" } ] } }, { "isoform_ac": "I3LKK0-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT6/entry#I3LKK0-1", "sequence": { "sequence": "MVQQVPENISFPAEEEKILQFWSDFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKLGIAEYNSQCRAIVMRYSTEWKSTITRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSIFVTFPLEEDENISLVAWTTTPWTLPSNLAVCVNPDLQYVKIKDVVRGTLHILMEARLSALYKLESDYEILERFPGACLKGKKYKPLFDYFVKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSPPVCPVDASGCFTEEVTDFAGQYVKDADKNIIRTLKEQGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEQLLGNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKVSDLHRESIDHLTIPSRCGKGLLHRISEVFDCWFESGSMPYAQIHYPFENKREFEDSFPADFIAEGIDQTRGWFYTLLVLATALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVLRLQKEEEMEFLYNENLVKESANITDRWVLSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKMLIDPVSVRDKDTLSIHYLMLPHVREELIDKKTESAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALDEIKSLEKYIIEELNVRKVTLSTDKNKYGIHLRAEPDHMVLGKRLKGAFKMVMTSIKQLSSEELEWFQESGTIVVEGHELHEEDIRLMYTFDQAAGGTTQFEAHSDAQCNLVPTDEITVYYKAKSEGEYLNNVIKSHTEFIFATIKAPLKPYPVPTSDKILIQEKMQLKGSDLEVTLTRGSSMPAPACAYVNLNICTNGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFEVKNMELSVFHGETEIKNQTNLMSLSGKTLCVTSGSAPSVIDSPSTLLCQYINLQLLNADPQGCLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLDETQTEEITEETPMKTLNTKTVYVAVLPTTADL", "length": 1230, "header": "tr|I3LKK0-1|I3LKK0_PIG Computationally mapped isoform of Isoleucine--tRNA ligase, cytoplasmic OS=Sus scrofa OX=9823 GN=IARS1 PE=1 SV=2 CANONICAL=I3LAT6-1" }, "locus": { "chromosome": "3", "start_pos": 42012678, "end_pos": 41946740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024941.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024941.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024614.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024614.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A4W5", "url": "https://www.uniprot.org/uniprotkb/A0A287A4W5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9856649", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9856649", "resource": "Reactome", "description": "Transcriptional and post-translational regulation of MITF-M expression and activity" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AAK5-1", "protein_name": "Isoleucine--tRNA ligase, cytoplasmic", "gene_name": "IARS", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRAGLHQRGLCCEALRMVQQVPENISFPNEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNNQCRGIVMRYSKEWEFNVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLVEDASVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDKATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPLFEYFIQCKDQGAFTVLVDSYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDVSGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSYKHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSMAELEELSGVKVTDLHRESIDHLTIPSRCGKGVLRRVPEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMAIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVHILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPPVREDLIDRKIESAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGAFKPVMAAIKELKSEQLEEFQETGTIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKDHTDFIFATIKAALKPYPVPTSKEVLIQETTQLKGSELEITLVRGGLCERVGPACSYVNLKVCVNGTEQDGVLLLENPKGDNTLNLTGLVDAVSCIFGLKNSKLTVFNGKTELINKTDLLSLSGKTLHVTTGSAPALINSPDALLCQYINLQLVNAKPQECQKGTVGTLLMENPVGQNGLTYHGLLHETAKVFGLRSRRLKLFLDEAETQEITKDISMKNLNMKTVYVSVIPTTAEC", "length": 1281 }, "evidence": [ { "id": "I3LAT6", "url": "https://omabrowser.org/oma/group/I3LAT6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HP24-1", "protein_name": "Isoleucine--tRNA ligase, cytoplasmic", "gene_name": "Iars1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVQQVPENISFPAEEEKTLQFWSKYNCFQECLKQSKNRPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSSACGTPLSNFESNQNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNPEIQYVKIKDVARGKLFILMEARLSALYKLESDYEILERFPGASLKGKKYKPLFDYFIKCKENGAFTVLVDHYVKDEEGTGVVHQAPYFGADDHRVCMDFNIIQKDSTPVCPVDASGCFTEEVTHFVGQYVKDADKNIIRMLKEQGRLLVASTFTHSYPFCWRSDTPLIYKSVPSWFVRVEHMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDFEEVVCIGSVAELEELSGTKISDLHRESIDHLTIPSRCGKGLLRRVSEVFDCWFESGSMPYAQVHYPFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVSIINKYGSDALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFVQNVFRLHKEDGVEFLYNEHTVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGESGTEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKTLIDPASVRDKDTLSIHYLMLPRVREELIDKKTEDAVSRMQSVIELGRVIRDRKTVPIKYPLKEIVVIHQDPEALEDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFKAVMMAIKQLSSEELEQFQKSGSIVVEGHELHEEDIRLMYSFDQATGGTAQFEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYNAKSEGRYLNNVIESHTDFIFATVKAPLKAYPVPTSDNILIQEQTQLKGSELELTLTRGSCVPGPACAYVNLNICANGIEQGGVLLLENPKGDNKLNLVKLKSVVTSIFGVKNAELSVFHGETEIQSQTDLLSLSGRTLCVTAGAAPSAVNSPSALLCQYINLQLLNAGPQECLTGTVGTLLLENPLGQNGLSHQGLVYEAAKVFGLRSRRLKLFLNKTQTEEITEDIPMKTLNMKTVYVSVLPTTADG", "length": 1262 }, "evidence": [ { "id": "I3LAT6", "url": "https://omabrowser.org/oma/group/I3LAT6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P09436-1", "protein_name": "Isoleucine--tRNA ligase, cytoplasmic", "gene_name": "ILS1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSESNAHFSFPKEEEKVLSLWDEIDAFHTSLELTKDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRYATMTGHHVERRFGWDTHGVPIEHIIDKKLGITGKDDVFKYGLENYNNECRSIVMTYASDWRKTIGRLGRWIDFDNDYKTMYPSFMESTWWAFKQLHEKGQVYRGFKVMPYSTGLTTPLSNFEAQQNYKDVNDPAVTIGFNVIGQEKTQLVAWTTTPWTLPSNLSLCVNADFEYVKIYDETRDRYFILLESLIKTLYKKPKNEKYKIVEKIKGSDLVGLKYEPLFPYFAEQFHETAFRVISDDYVTSDSGTGIVHNAPAFGEEDNAACLKNGVISEDSVLPNAIDDLGRFTKDVPDFEGVYVKDADKLIIKYLTNTGNLLLASQIRHSYPFCWRSDTPLLYRSVPAWFVRVKNIVPQMLDSVMKSHWVPNTIKEKRFANWIANARDWNVSRNRYWGTPIPLWVSDDFEEVVCVGSIKELEELTGVRNITDLHRDVIDKLTIPSKQGKGDLKRIEEVFDCWFESGSMPYASQHYPFENTEKFDERVPANFISEGLDQTRGWFYTLAVLGTHLFGSVPYKNVIVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLINSPVLKAESLKFKEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKMSNIDFQYDDSVKSDNVMDRWILASMQSLVQFIHEEMGQYKLYTVVPKLLNFIDELTNWYIRFNRRRLKGENGVEDCLKALNSLFDALFTFVRAMAPFTPFLSESIYLRLKEYIPEAVLAKYGKDGRSVHFLSYPVVKKEYFDEAIETAVSRMQSVIDLGRNIREKKTISLKTPLKTLVILHSDESYLKDVEALKNYIIEELNVRDVVITSDEAKYGVEYKAVADWPVLGKKLKKDAKKVKDALPSVTSEQVREYLESGKLEVAGIELVKGDLNAIRGLPESAVQAGQETRTDQDVLIIMDTNIYSELKSEGLARELVNRIQKLRKKCGLEATDDVLVEYELVKDTIDFEAIVKEHFDMLSKTCRSDIAKYDGSKTDPIGDEEQSINDTIFKLKVFKL", "length": 1072 }, "evidence": [ { "id": "I3LAT6", "url": "https://omabrowser.org/oma/group/I3LAT6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P41252-1", "protein_name": "Isoleucine--tRNA ligase, cytoplasmic", "gene_name": "IARS1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLQQVPENINFPAEEEKILEFWTEFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKMGITEYNNQCRAIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDETVSLVAWTTTPWTLPSNLAVCVNPEMQYVKIKDVARGRLLILMEARLSALYKLESDYEILERFPGAYLKGKKYRPLFDYFLKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGAEDYRVCMDFNIIRKDSLPVCPVDASGCFTTEVTDFAGQYVKDADKSIIRTLKEQGRLLVATTFTHSYPFCWRSDTPLIYKAVPSWFVRVENMVDQLLRNNDLCYWVPELVREKRFGNWLKDARDWTISRNRYWGTPIPLWVSDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPSRCGKGSLHRISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKVLIDPVSVQDKDTLSIHYLMLPRVREELIDKKTESAVSQMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALKDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFKAVMTSIKQLSSEELEQFQKTGTIVVEGHELHDEDIRLMYTFDQATGGTAQFEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGTYLNSVIESHTEFIFTTIKAPLKPYPVSPSDKVLIQEKTQLKGSELEITLTRGSSLPGPACAYVNLNICANGSEQGGVLLLENPKGDNRLDLLKLKSVVTSIFGVKNTELAVFHDETEIQNQTDLLSLSGKTLCVTAGSAPSLINSSSTLLCQYINLQLLNAKPQECLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLNETQTQEITEDIPVKTLNMKTVYVSVLPTTADF", "length": 1262 }, "evidence": [ { "id": "I3LAT6", "url": "https://omabrowser.org/oma/group/I3LAT6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54YD4-1", "protein_name": "Probable isoleucine--tRNA ligase, cytoplasmic", "gene_name": "ileS", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEEVPQKIDFAGEESKILKYWDDIKAFETSVKMSEGKPEYSFYDGPPFATGLPHYGHILAGTIKDTITRYAHQTGHHVERRFGWDCHGLPIEFEIDKLHGVRTKEDVLKMGIPTYNQHCRSIVMKYSHEWEIVVNRMGRWIDMKNNYKTMDTPFMESVWWVFQELFKKDLVYQGFKVMPYSIGCTTPLSNFEASSNYKDVSDPACVVSFQTLDDEKVSILAWTTTPWTLPSNLALTVNPKMEYIKINDIKRNQIFILGKNRTSILYKSDKEYTVLETMKGTDLIGKKYVPMFPYFASDANMGGFVVIGGDFVTDDSGTGIVHTAPAYGEDDFNVCIANGVISRDQFKRPILNSVDANGCFTSDVTDFAGMMVKDAETTKQISIYLKNKGRMVNSANLVHSYPYCWRSDTPLIYKAVGSWFVRVESIRDKLLANNDKTYWVPDFVKEKRFANWLKNATDWAVSRNRYWGTPIPLWISEDGEEVVVIGSIDELERLSGVRVTDLHRESIDHITIPSQKGKGTLRRIEDVFDCWFESGSMPYAQQHYPFENKDKFEKIFPAHFIAEGLDQTRGWFYTLLVLSTALFDKPPFQNLIVNGLVLAADGKKMSKRLKNYPDPMEVVSKVGADSLRLYLINSPVVRAETLKFQEKGVQDMIKDVFLPWFNAYRFFVQNCLRFEKATNTTFQPDIKVALASENVMDKWILASCQSLIAFVRAEMAAYRLYTVVPKLVRFIEDLTNWFVRLNRKRLKGSNGDADCLAALNILYEVLMTICIAMGPFTPFFTEYMYQNLKKALPKEKQMDSVHYVMFPEPIQEAFNTRIEEAISRMQVVIELGRAARDRRTKPIKFPLKEFMVITENQQYLADLESLKSYILEELNIQNIVLTSDEGSFVVVTAEADNKRLGARLKNDFKKISPLISKLTNEQLREFQKTQTIDILGHELTSEDLKIIRKYNGETTNSEPSGNEEILTVLDLTVDSALYEKGLARELINRVQRLRKKSGLTFDDPVSMFYHTKEAELKTAIENNNDYIKETILFNLQFSETTSPSNSFATEIVSIVKDNDAEIYFLKN", "length": 1067 }, "evidence": [ { "id": "I3LAT6", "url": "https://omabrowser.org/oma/group/I3LAT6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BU30-1", "protein_name": "Isoleucine--tRNA ligase, cytoplasmic", "gene_name": "Iars1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVQQVPENISFPAEEEKILEFWSKHNCFQECLKQSKLRPKFTFYDGPPFATGLPHYGHILAGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQCRAIVMRYSAEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPFSTACGTPLSNFESNQNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNPEIQYVKIKDVARGKLFILTEARLSALYKQESDYEILERFPGASLKGKKYKPLFDYFIKCKENGAFTVLVDHYVKDEEGTGVVHQAPYFGADDHRVCMDFNIIQKDSVPVCPVDASGCFTEEVTHFVGQYVKDADKNIIRMLKEQGRLLAAGTFTHSYPFCWRSDTPLIYKSVPSWFVRVEPMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDLEEVVCIGSVAELEELSGTKISDLHRESIDHLTIPSRCGKAPLRRVSEVFDCWFESGSMPYAQVHYPFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVSIIDKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVFRLHKEEEVKFLYNEHTVRESPNITDRWVLSFMQSLLGFFETEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGESGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKLLIDPASLRDKDTLSIHYLMLPRVREELIDKKTENAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDPEALEDIRSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFKAVMMAIKRLSNEELERFQKSGSIVVEGHELHEEDIRLMYTFDQATGGTAQFEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYNAKSEGRYLNNVIESHTDFIFATIKAPLKPYPVPTSDNILIQEQTQLKGSELEITLTKGSCVPGPACAYVNLNICANGTEQGGVLLLENPKGDNQLNLVKLKTVVTSVFGVKNAKLSVFHGETEIQNQTDLLSLSGRTLCVTAGASPSPISSPSTLLCQYLNLQLLNAEPQECLTGTVGTLLLENPLGQNGLTHQGLVHEAAKVFGLRSRRLRLFLNETQTQEITEDIPMKTLNMKTVYVSVLPTTADG", "length": 1262 }, "evidence": [ { "id": "I3LAT6", "url": "https://omabrowser.org/oma/group/I3LAT6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "aminoacyl-tRNA deacylase activity", "id": "GO:0002161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002161", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" }, { "name": "isoleucine-tRNA ligase activity", "id": "GO:0004822", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004822", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" }, { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" }, { "name": "GTPase binding", "id": "GO:0051020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051020", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "isoleucyl-tRNA aminoacylation", "id": "GO:0006428", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006428", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" }, { "name": "aminoacyl-tRNA synthetase multienzyme complex", "id": "GO:0017101", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017101", "evidence": [ { "database": "UniProtKB", "id": "I3LAT6", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1090, "end_pos": 1092, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1140, "end_pos": 1142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 690, "end_pos": 692, "annotation": "n_glycosylation_sequon" }, { "start_pos": 8, "end_pos": 10, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "11060", "name": "", "equation": "tRNA(Ile) + L-isoleucine + ATP = L-isoleucyl-tRNA(Ile) + AMP + diphosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "11060", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/11060" } ] }, { "id": "R-SSC-9825759", "name": "MAPK-dependent phosphorylation of KARS", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9825759", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9825759" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LAT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" }, { "id": "PF00133", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00133" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Aminoacyl-tRNA synthetase class Ia", "eco_id": "ECO_0000259", "start_pos": 17, "end_pos": 638, "start_aa": "Lys", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LAT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" }, { "id": "PF23567", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23567" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Isoleucine--tRNA ligase cytoplasmic ubiquitin-like", "eco_id": "ECO_0000259", "start_pos": 1078, "end_pos": 1160, "start_aa": "Pro", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LAT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT6" }, { "id": "PF08264", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08264" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding", "eco_id": "ECO_0000259", "start_pos": 693, "end_pos": 849, "start_aa": "Asp", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1090, "end_pos": 1092 }, { "start_pos": 1140, "end_pos": 1142 }, { "start_pos": 217, "end_pos": 219 }, { "start_pos": 690, "end_pos": 692 }, { "start_pos": 8, "end_pos": 10 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LF98-1", "uniprot_ac": "I3LF98", "uniprot_id": "I3LF98_PIG", "mass": { "chemical_mass": 52445.0, "monoisotopic_mass": 52445.0 }, "refseq": {}, "gene_names": [ { "name": "STK39", "type": "recommended", "evidence": [ { "id": "I3LF98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ] } ], "protein_names": [ { "name": "non-specific serine/threonine protein kinase", "type": "recommended", "evidence": [ { "id": "I3LF98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF98/entry#names_and_taxonomy" } ] }, { "name": "2.7.11.1", "type": "synonym", "evidence": [ { "id": "I3LF98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF98/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "STK39", "url": "https://www.uniprot.org/uniprotkb/I3LF98", "locus": { "chromosome": "15", "start_pos": 74447787, "end_pos": 74758122, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022496", "url": "https://www.ensembl.org/id/ENSSSCG00000022496" } ] } } ], "crossref": [ { "id": "I3LF98", "url": "https://alphafold.ebi.ac.uk/entry/I3LF98", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022496", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022496", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06610", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06610", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024678", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024678", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050629", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050629", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR48012", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48012", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48012:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48012:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12202", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12202", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2Q9A2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9A2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9A2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9A2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QC66", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC66", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QC66-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QC66-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZU5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZU5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF98-1", "url": "https://www.uniprot.org/uniprotkb/I3LF98-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIX4", "url": "https://www.uniprot.org/uniprotkb/I3LIX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIX4-1", "url": "https://www.uniprot.org/uniprotkb/I3LIX4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "LCSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVNASSIPEQIQSLSVQDSQVCFSAYFNVLYVMYFRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFKLASGCDGSEIPDEVKLIGFAQLSVS", "length": 469, "header": "tr|I3LF98-1|I3LF98_PIG Isoform 1 of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=STK39 PE=3 SV=3 CANONICAL=I3LF98-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q9A2-1", "url": "https://www.uniprot.org/uniprotkb/I3LF98/entry#A0A5G2Q9A2-1", "sequence": { "sequence": "MAEPTGSPVHVQQPQQAAPVTATAVTAPAAATAAPAPAAPVAPTPAPAAQAVGWPICRDAYELQEVIGSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVNASSIPEQIQSLSVQDSQGLPNASEDYREASCAVNLVLRLRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFKLVSGKLWKEGKYFAMPFHQGVIIY", "length": 541, "header": "tr|A0A5G2Q9A2-1|A0A5G2Q9A2_PIG Computationally mapped isoform of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=STK39 PE=1 SV=2 CANONICAL=I3LF98-1" }, "locus": { "chromosome": "15", "start_pos": 74757702, "end_pos": 74459632, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076934.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076934.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060863.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060863.2" } ] } }, { "isoform_ac": "A0A5G2QC66-1", "url": "https://www.uniprot.org/uniprotkb/I3LF98/entry#A0A5G2QC66-1", "sequence": { "sequence": "MAEPTGSPVHVQQPQQAAPVTATAVTAPAAATAAPAPAAPVAPTPAPAAQAVGWPICRDAYELQEVIGSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVNASSIPEQIQSLSVQDSQGLPNASEDYREASCAVNLVLRLRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFNFPEATAKWF", "length": 526, "header": "tr|A0A5G2QC66-1|A0A5G2QC66_PIG Computationally mapped isoform of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=STK39 PE=1 SV=1 CANONICAL=I3LF98-1" }, "locus": { "chromosome": "15", "start_pos": 74757702, "end_pos": 74459343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069974.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069974.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059639.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059639.1" } ] } }, { "isoform_ac": "A0A5G2QZU5-1", "url": "https://www.uniprot.org/uniprotkb/I3LF98/entry#A0A5G2QZU5-1", "sequence": { "sequence": "MAEPTGSPVHVQQPQQAAPVTATAVTAPAAATAAPAPAAPVAPTPAPAAQAVGWPICRDAYELQEVIGSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIAALVSFLNTESPMTKTSPGKPATRLNLLPVFRCNILKGPEEDFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVNASSIPEQIQSLSVQDSQGLPNASEDYREASCAVNLVLRLRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFKLASGCDGSEIPDEVKLIGFAQLSVS", "length": 582, "header": "tr|A0A5G2QZU5-1|I3LF98_PIG Computationally mapped isoform of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=STK39 PE=3 SV=1 CANONICAL=I3LF98-1" }, "locus": { "chromosome": "15", "start_pos": 74757702, "end_pos": 74449266, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076458.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076458.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070418.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070418.1" } ] } }, { "isoform_ac": "I3LF98-1", "url": "https://www.uniprot.org/uniprotkb/I3LF98/entry#I3LF98-1", "sequence": { "sequence": "LCSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVNASSIPEQIQSLSVQDSQVCFSAYFNVLYVMYFRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFKLASGCDGSEIPDEVKLIGFAQLSVS", "length": 469, "header": "tr|I3LF98-1|I3LF98_PIG Isoform 1 of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=STK39 PE=3 SV=3 CANONICAL=I3LF98-1" }, "locus": { "chromosome": "15", "start_pos": 74690706, "end_pos": 74449266, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030157.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030157.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022738.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022738.3" } ] } }, { "isoform_ac": "I3LIX4-1", "url": "https://www.uniprot.org/uniprotkb/I3LF98/entry#I3LIX4-1", "sequence": { "sequence": "MAEPTGSPVHAVGWPICRDAYELQEVIGSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVNASSIPEQIQSLSVQDSQGLPNASEDYREASCAVNLVLRLRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFKLASGCDGSEIPDEVKLIGFAQLSVS", "length": 502, "header": "tr|I3LIX4-1|I3LIX4_PIG Computationally mapped isoform of non-specific serine/threonine protein kinase OS=Sus scrofa OX=9823 GN=STK39 PE=1 SV=4 CANONICAL=I3LF98-1" }, "locus": { "chromosome": "15", "start_pos": 74757702, "end_pos": 74449266, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030087.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030087.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024031.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024031.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZU5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZU5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "potassium channel inhibitor activity", "id": "GO:0019870", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019870", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "transmembrane transporter binding", "id": "GO:0044325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044325", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "basolateral plasma membrane", "id": "GO:0016323", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016323", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "cell body", "id": "GO:0044297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044297", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 19, "go_terms": [ { "name": "cellular hypotonic response", "id": "GO:0071476", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071476", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "negative regulation of potassium ion transmembrane transport", "id": "GO:1901380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901380", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "intracellular chloride ion homeostasis", "id": "GO:0030644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030644", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "inflammatory response", "id": "GO:0006954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006954", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "positive regulation of T cell chemotaxis", "id": "GO:0010820", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010820", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "cell volume homeostasis", "id": "GO:0006884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006884", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "positive regulation of p38MAPK cascade", "id": "GO:1900745", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900745", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "sodium ion transmembrane transport", "id": "GO:0035725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035725", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "response to dietary excess", "id": "GO:0002021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002021", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "cellular hyperosmotic response", "id": "GO:0071474", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071474", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "response to aldosterone", "id": "GO:1904044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904044", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "cellular response to potassium ion", "id": "GO:0035865", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035865", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "macrophage activation", "id": "GO:0042116", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042116", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "negative regulation of pancreatic juice secretion", "id": "GO:0090188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090188", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "maintenance of lens transparency", "id": "GO:0036438", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036438", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "renal sodium ion absorption", "id": "GO:0070294", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070294", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "negative regulation of sodium ion transmembrane transport", "id": "GO:1902306", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902306", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" }, { "name": "chemokine (C-X-C motif) ligand 12 signaling pathway", "id": "GO:0038146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038146", "evidence": [ { "database": "UniProtKB", "id": "I3LF98", "url": "https://www.uniprot.org/uniprotkb/I3LF98" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 350, "end_pos": 352, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "46608", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/46608" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LF98-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 469, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LF98-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LF98" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LF98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF98" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 269, "start_aa": "Leu", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 350, "end_pos": 352 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LK62-1", "uniprot_ac": "I3LK62", "uniprot_id": "I3LK62_PIG", "mass": { "chemical_mass": 56651.0, "monoisotopic_mass": 56651.0 }, "refseq": { "ac": "XP_020950257", "name": "retinal dehydrogenase 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950257" }, "gene_names": [ { "name": "ALDH1A2", "type": "recommended", "evidence": [ { "id": "I3LK62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ] }, { "name": "ALDH1A2", "type": "synonym", "evidence": [ { "id": "XP_020950257", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950257" } ] } ], "protein_names": [ { "name": "Aldehyde dehydrogenase 1 family member A2", "type": "synonym", "evidence": [ { "id": "I3LK62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK62/entry#names_and_taxonomy" } ] }, { "name": "retinal dehydrogenase 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020950257", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950257" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ALDH1A2", "url": "https://www.uniprot.org/uniprotkb/I3LK62", "locus": { "chromosome": "1", "start_pos": 114037046, "end_pos": 113932739, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025578", "url": "https://www.ensembl.org/id/ENSSSCG00000025578" } ] } } ], "crossref": [ { "id": "I3LK62", "url": "https://alphafold.ebi.ac.uk/entry/I3LK62", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000025578", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025578", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07141", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07141", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100737077", "url": "https://www.ncbi.nlm.nih.gov/gene/100737077", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR015590", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015590", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016160", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016160", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016161", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016161", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016162", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016162", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016163", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016163", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029510", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029510", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737077", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737077", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WSNTFNK", "url": "https://omabrowser.org/oma/group/WSNTFNK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LK62", "url": "https://www.orthodb.org/?gene=I3LK62", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11699", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11699", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00171", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00171", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5365859", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5365859", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020950257", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950257", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R5I9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5I9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5I9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5I9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RN58", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RN58", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RN58-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RN58-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FH31", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH31", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FH31-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH31-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK62-1", "url": "https://www.uniprot.org/uniprotkb/I3LK62-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LSK6", "url": "https://www.uniprot.org/uniprotkb/I3LSK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LSK6-1", "url": "https://www.uniprot.org/uniprotkb/I3LSK6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVIPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 518, "header": "tr|I3LK62-1|I3LK62_PIG Isoform 1 of Aldehyde dehydrogenase 1 family member A2 OS=Sus scrofa OX=9823 GN=ALDH1A2 PE=1 SV=2 CANONICAL=I3LK62-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R5I9-1", "url": "https://www.uniprot.org/uniprotkb/I3LK62/entry#A0A5G2R5I9-1", "sequence": { "sequence": "MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVIPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 480, "header": "tr|A0A5G2R5I9-1|A0A5G2R5I9_PIG Computationally mapped isoform of Aldehyde dehydrogenase 1 family member A2 OS=Sus scrofa OX=9823 GN=ALDH1A2 PE=1 SV=1 CANONICAL=I3LK62-1" }, "locus": { "chromosome": "1", "start_pos": 114035266, "end_pos": 113933448, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070862.1", "url": "https://www.ensembl.org/id/ENSSSCT00000070862.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072501.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072501.1" } ] } }, { "isoform_ac": "A0A5G2RN58-1", "url": "https://www.uniprot.org/uniprotkb/I3LK62/entry#A0A5G2RN58-1", "sequence": { "sequence": "MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVIPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMVAVRIKCYNQICPTSVRVSGKPSEILSYSHHY", "length": 527, "header": "tr|A0A5G2RN58-1|I3LK62_PIG Computationally mapped isoform of Aldehyde dehydrogenase 1 family member A2 OS=Sus scrofa OX=9823 GN=ALDH1A2 PE=1 SV=1 CANONICAL=I3LK62-1" }, "locus": { "chromosome": "1", "start_pos": 114031588, "end_pos": 113933448, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072756.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072756.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074195.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074195.1" } ] } }, { "isoform_ac": "A0A8W4FH31-1", "url": "https://www.uniprot.org/uniprotkb/I3LK62/entry#A0A8W4FH31-1", "sequence": { "sequence": "MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVIPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREIEEGISHRVQRGTYNISELYYSHPFIKQIFC", "length": 525, "header": "tr|A0A8W4FH31-1|I3LK62_PIG Computationally mapped isoform of Aldehyde dehydrogenase 1 family member A2 OS=Sus scrofa OX=9823 GN=ALDH1A2 PE=1 SV=1 CANONICAL=I3LK62-1" }, "locus": { "chromosome": "1", "start_pos": 114029117, "end_pos": 113933448, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106626.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106626.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078186.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078186.1" } ] } }, { "isoform_ac": "I3LK62-1", "url": "https://www.uniprot.org/uniprotkb/I3LK62/entry#I3LK62-1", "sequence": { "sequence": "MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVIPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 518, "header": "tr|I3LK62-1|I3LK62_PIG Isoform 1 of Aldehyde dehydrogenase 1 family member A2 OS=Sus scrofa OX=9823 GN=ALDH1A2 PE=1 SV=2 CANONICAL=I3LK62-1" }, "locus": { "chromosome": "1", "start_pos": 114035266, "end_pos": 113933448, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027950.2", "url": "https://www.ensembl.org/id/ENSSSCT00000027950.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024476.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024476.2" } ] } }, { "isoform_ac": "I3LSK6-1", "url": "https://www.uniprot.org/uniprotkb/I3LK62/entry#I3LSK6-1", "sequence": { "sequence": "RKLLNWDGRVIPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 474, "header": "tr|I3LSK6-1|I3LSK6_PIG Computationally mapped isoform of Aldehyde dehydrogenase 1 family member A2 OS=Sus scrofa OX=9823 GN=ALDH1A2 PE=1 SV=4 CANONICAL=I3LK62-1" }, "locus": { "chromosome": "1", "start_pos": 114035266, "end_pos": 113972578, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024465.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024465.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027099.4", "url": "https://www.ensembl.org/id/ENSSSCP00000027099.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 245, "start_aa": "Thr", "end_pos": 245, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr245", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 30, "start_aa": "Thr", "end_pos": 30, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr30", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RN58", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RN58" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100737077", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737077", "resource": "KEGG Pathway" }, { "id": "R-SSC-5365859", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5365859", "resource": "Reactome", "description": "RA biosynthesis pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3X6U1-1", "protein_name": "Aldehyde dehydrogenase 1 family member A2", "gene_name": "ALDH1A2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTSSEIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVFPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 518 }, "evidence": [ { "id": "I3LK62", "url": "https://omabrowser.org/oma/group/I3LK62/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O93344-1", "protein_name": "Retinal dehydrogenase 2", "gene_name": "ALDH1A2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTSSKIEMPGEVKADPAALMASLHLLPSPTLNLEIKHTKIFINNEWQNSESGRVFPVYNPATGEQICEIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGQLLDKLADLVERDRAVLATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTVDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGESGLREYSEVKTVTIKIPQKNS", "length": 518 }, "evidence": [ { "id": "I3LK62", "url": "https://omabrowser.org/oma/group/I3LK62/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O94788-1", "protein_name": "Retinal dehydrogenase 2", "gene_name": "ALDH1A2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVFPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 518 }, "evidence": [ { "id": "I3LK62", "url": "https://omabrowser.org/oma/group/I3LK62/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P40047-1", "protein_name": "Aldehyde dehydrogenase 5, mitochondrial", "gene_name": "ALD5", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLSRTRAAAPNSRIFTRSLLRLYSQAPLRVPITLPNGFTYEQPTGLFINGEFVASKQKKTFDVINPSNEEKITTVYKAMEDDVDEAVAAAKKAFETKWSIVEPEVRAKALFNLADLVEKHQETLAAIESMDNGKSLFCARGDVALVSKYLRSCGGWADKIYGNVIDTGKNHFTYSIKEPLGVCGQIIPWNFPLLMWSWKIGPALATGNTVVLKPAETTPLSALFASQLCQEAGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAADTVKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKEDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWINTYNNFHQNVPFGGFGQSGIGREMGEAALSNYTQTKSVRIAIDKPIR", "length": 520 }, "evidence": [ { "id": "I3LK62", "url": "https://omabrowser.org/oma/group/I3LK62/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54FY2-1", "protein_name": "Aldehyde dehydrogenase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKVQLPNTKLFINNEWVESVSGKKLKTFNPTNGKLICEVSEGGKEDVDVAVKAARNALDNGPWGKMTAEDRGKLILKLADLVDQHREHLSDLETLDNGKPLTASSGFDITEAARALRYFGGWADKIQGKTIPISSEFTAMTKHEPIGVVGLIVAWNFPLLLLSWKLGPSLAAGCTIVAKPSEFTPLTALYFCELVKEAGFPPGVINIVNGVGDVVGDALSHHMDVDKISFTGSTRVGRLIMEAAAKSNLKPVTLELGGKSPNIIFGDCDIEYVANAAKNYVFANSMQLCCAASRFFVHESILDAFLTIFTEKIKQLKVGDPYDSETHLGPLVSKQQHDRVLGYIQKGKEEGATCHLGGEVHNHHADGAGYFIQPTIFTNVTDDMTICKEEIFGPVVVILPFKTVDEVIKRANDTTYGLAAGVWTKDISLALNVSNKLKSGSVWVNGFNILKSQIPFGGFKQSGFGRDLSEYAIQGYLSVKAVTIAHKTLHAQQQ", "length": 495 }, "evidence": [ { "id": "I3LK62", "url": "https://omabrowser.org/oma/group/I3LK62/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q62148-1", "protein_name": "Retinal dehydrogenase 2", "gene_name": "Aldh1a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSSEIAMPGEVKADPAALMASLQLLPSPTPNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKVLELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 518 }, "evidence": [ { "id": "I3LK62", "url": "https://omabrowser.org/oma/group/I3LK62/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q63639-1", "protein_name": "Retinal dehydrogenase 2", "gene_name": "Aldh1a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTSSEIAMPGEVKADPAALMASLQLLPSPTPNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS", "length": 518 }, "evidence": [ { "id": "I3LK62", "url": "https://omabrowser.org/oma/group/I3LK62/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "negative regulation of cell population proliferation", "id": "GO:0008285", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008285", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" }, { "name": "protein homotetramerization", "id": "GO:0051289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051289", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" }, { "name": "cellular response to retinoic acid", "id": "GO:0071300", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071300", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" }, { "name": "retinoic acid biosynthetic process", "id": "GO:0002138", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002138", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" }, { "name": "neural tube development", "id": "GO:0021915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0021915", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" }, { "name": "response to cytokine", "id": "GO:0034097", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034097", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" }, { "name": "aldehyde metabolic process", "id": "GO:0006081", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006081", "evidence": [ { "database": "UniProtKB", "id": "I3LK62", "url": "https://www.uniprot.org/uniprotkb/I3LK62" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "retinal dehydrogenase (NAD+) activity", "id": "GO:0001758", "url": 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"reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LK62-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 518, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LK62-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LK62" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LK62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK62" }, { "id": "PF00171", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00171" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Aldehyde dehydrogenase", "eco_id": "ECO_0000259", "start_pos": 46, "end_pos": 509, "start_aa": "Trp", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": 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{ "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LEB7-1", "uniprot_ac": "I3LEB7", "uniprot_id": "I3LEB7_PIG", "mass": { "chemical_mass": 78128.0, "monoisotopic_mass": 78128.0 }, "refseq": {}, "gene_names": [ { "name": "PODN", "type": "recommended", "evidence": [ { "id": "I3LEB7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ] } ], "protein_names": [ { "name": "Podocan", "type": "recommended", "evidence": [ { "id": "I3LEB7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEB7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Mediates the transfer of all common phospholipids, cholesterol and gangliosides from the endoplasmic reticulum to the plasma membrane. May play a role in regulating steroidogenesis. Stimulates the microsomal conversion of 7-dehydrocholesterol to cholesterol. Also binds fatty acids and fatty acyl Coenzyme A (CoA) such as phytanoyl-CoA. Involved in the regulation phospholipid synthesis in endoplasmic reticulum enhancing the incorporation of exogenous fatty acid into glycerides. Seems to stimulate the rate-limiting step in phosphatidic acid formation mediated by GPAT3. Isoforms SCP2 and SCPx cooperate in peroxisomal oxidation of certain naturally occurring tetramethyl-branched fatty acyl-CoAs.", "evidence": [ { "database": "UniProtKB", "id": "F1S762", "url": "https://www.uniprot.org/uniprotkb/F1S762#function" }, { "database": "UniProtKB", "id": "ARBA00045738", "url": "https://www.uniprot.org/uniprotkb/ARBA00045738#function" } ] }, { "annotation": "Plays a crucial role in the peroxisomal oxidation of branched-chain fatty acids. Catalyzes the last step of the peroxisomal beta-oxidation of branched chain fatty acids and the side chain of the bile acid intermediates di- and trihydroxycoprostanic acids (DHCA and THCA). Also active with medium and long straight chain 3-oxoacyl-CoAs. Stimulates the microsomal conversion of 7-dehydrocholesterol to cholesterol and transfers phosphatidylcholine and 7-dehydrocholesterol between membrances, in vitro. Isoforms SCP2 and SCPx cooperate in peroxisomal oxidation of certain naturally occurring tetramethyl-branched fatty acyl-CoAs.", "evidence": [ { "database": "UniProtKB", "id": "F1S762", "url": "https://www.uniprot.org/uniprotkb/F1S762#function" }, { "database": "UniProtKB", "id": "ARBA00045994", "url": "https://www.uniprot.org/uniprotkb/ARBA00045994#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PODN", "url": "https://www.uniprot.org/uniprotkb/I3LEB7", "locus": { "chromosome": "6", "start_pos": 159159134, "end_pos": 159297965, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027114", "url": "https://www.ensembl.org/id/ENSSSCG00000027114" } ] } } ], "crossref": [ { "id": "I3LEB7", "url": "https://alphafold.ebi.ac.uk/entry/I3LEB7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027114", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027114", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00826", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00826", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000372", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000372", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003033", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003033", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016039", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016039", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020613", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020613", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020615", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020615", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026906", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026906", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055140", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055140", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR42870", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42870", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR42870:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42870:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45712", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45712", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45712:SF20", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45712:SF20", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02036", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02036", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13306", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13306", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22691", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22691", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "10408", "url": "https://www.rhea-db.org/rhea/10408", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "16865", "url": "https://www.rhea-db.org/rhea/16865", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "18161", "url": "https://www.rhea-db.org/rhea/18161", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "21564", "url": "https://www.rhea-db.org/rhea/21564", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "31087", "url": "https://www.rhea-db.org/rhea/31087", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "31091", "url": "https://www.rhea-db.org/rhea/31091", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "31111", "url": "https://www.rhea-db.org/rhea/31111", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "31183", "url": "https://www.rhea-db.org/rhea/31183", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "31203", "url": "https://www.rhea-db.org/rhea/31203", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "35279", "url": "https://www.rhea-db.org/rhea/35279", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "40343", "url": "https://www.rhea-db.org/rhea/40343", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46344", "url": "https://www.rhea-db.org/rhea/46344", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "47400", "url": "https://www.rhea-db.org/rhea/47400", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "62960", "url": "https://www.rhea-db.org/rhea/62960", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZQN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZQN2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZQN2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKH0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FKH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FKH0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S762", "url": "https://www.uniprot.org/uniprotkb/F1S762", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S762-1", "url": "https://www.uniprot.org/uniprotkb/F1S762-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEB7-1", "url": "https://www.uniprot.org/uniprotkb/I3LEB7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGTQFLLKRSPQVEAVPTSSTLDGFKANLVFKEIEKRLEEEGEQFVKKIGGIFAFKVKDGPEGREATWVVDVKNGKGAVLPNSGTMAQSRALLLLLLLPPQLPLGLVLAVRAPGFGRSGTHSPSHEENEFGEEEPVLVLSPQEPGRGPATIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPGELSRLHRLETLNLQNNRLTSRGLPEEAFEHLTNLNYLYLANNKLTLAPRFLPNALISVDFAANYLTKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEILILSSNFLRHVPKHLPPALYKLHLKNNKLEKIPPGVFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGLPRSLVLLHLEKNAIRCVDADVLTPIRSLEYLLLHSNQLRAQGIHPRAFQGLKRLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGRDDFATTYFLEELNLSYNRITSAQVHRDAFRKLRQLRSLDLSGNRLHTLPPGLPRNVHVLKIKRNELAALARGALAGMAQLRELYLTGNRLRSRALGPRAWADLAGLQLLDIAGNQLTEIPEGLPRSLEYLYLQNNKISAVLANAFDSTPNLKGIFLRFNKLAVGSVVDSAFRRLKHLQVLDIEGNFEFGDVSKDRGRVKEAEEDEDEDEEDEERR", "length": 697, "header": "tr|I3LEB7-1|I3LEB7_PIG Isoform 1 of Podocan OS=Sus scrofa OX=9823 GN=PODN PE=1 SV=3 CANONICAL=I3LEB7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZQN2-1", "url": "https://www.uniprot.org/uniprotkb/I3LEB7/entry#A0A286ZQN2-1", "sequence": { "sequence": "MGFPEAARSPQVEAVPTSSTLDGFKANLVFKEIEKRLEEEGEQFVKKIGGIFAFKVKDGPEGREATWVVDVKNGKGAVLPNSGTMAQSRALLLLLLLPPQLPLGLVLAVRAPGFGRSGTHSPSHEENEFGEEEPVLVLSPQEPGRGPATIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPGELSRLHRLETLNLQNNRLTSRGLPEEAFEHLTNLNYLYLANNKLTLAPRFLPNALISVDFAANYLTKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEILILSSNFLRHVPKHLPPALYKLHLKNNKLEKIPPGVFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGLPRSLVLLHLEKNAIRCVDADVLTPIRSLEYLLLHSNQLRAQGIHPRAFQGLKRLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGRDDFATTYFLEELNLSYNRITSAQVHRDAFRKLRQLRSLDLSGNRLHTLPPGLPRNVHVLKIKRNELAALARGALAGMAQLRELYLTGNRLRSRALGPRAWADLAGLQLLDIAGNQLTEIPEGLPRSLEYLYLQNNKISAVLANAFDSTPNLKGIFLRFNKLAVGSVVDSAFRRLKHLQVLDIEGNFEFGDVSKDRGRVKEAEEDEDEDEEDEERR", "length": 696, "header": "tr|A0A286ZQN2-1|I3LEB7_PIG Computationally mapped isoform of Podocan OS=Sus scrofa OX=9823 GN=PODN PE=1 SV=2 CANONICAL=I3LEB7-1" }, "locus": { "chromosome": "6", "start_pos": 159224352, "end_pos": 159159163, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050835.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050835.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033928.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033928.2" } ] } }, { "isoform_ac": "A0A8W4FKH0-1", "url": "https://www.uniprot.org/uniprotkb/I3LEB7/entry#A0A8W4FKH0-1", "sequence": { "sequence": "MAGARARGAQRRLEERGLLAGSGAAPERSSGPSTPPAGTMAQSRALLLLLLLPPQLPLGLVLAVRAPGFGRSGTHSPSHEENEFGEEEPVLVLSPQEPGRGPATIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPGELSRLHRLETLNLQNNRLTSRGLPEEAFEHLTNLNYLYLANNKLTLAPRFLPNALISVDFAANYLTKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEILILSSNFLRHVPKHLPPALYKLHLKNNKLEKIPPGVFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGLPRSLVLLHLEKNAIRCVDADVLTPIRSLEYLLLHSNQLRAQGIHPRAFQGLKRLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGRDDFATTYFLEELNLSYNRITSAQVHRDAFRKLRQLRSLDLSGNRLHTLPPGLPRNVHVLKIKRNELAALARGALAGMAQLRELYLTGNRLRSRALGPRAWADLAGLQLLDIAGNQLTEIPEGLPRSLEYLYLQNNKISAVLANAFDSTPNLKGIFLRFNKLAVGSVVDSAFRRLKHLQVLDIEGNFEFGDVSKDRGRVKEAEEDEDEDEEDEERR", "length": 651, "header": "tr|A0A8W4FKH0-1|A0A8W4FKH0_PIG Computationally mapped isoform of Podocan OS=Sus scrofa OX=9823 GN=PODN PE=1 SV=1 CANONICAL=I3LEB7-1" }, "locus": { "chromosome": "6", "start_pos": 159179251, "end_pos": 159159163, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094642.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094642.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079397.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079397.1" } ] } }, { "isoform_ac": "F1S762-1", "url": "https://www.uniprot.org/uniprotkb/I3LEB7/entry#F1S762-1", "sequence": { "sequence": "MENLYLLFIYFFVFLFFSGPHPRHMEVPRLGCHVTLQLPNYHVAYIILFFYVGDSTCGQRSIYHSLGLTGIPIINVNNNCSTGSTALFMARQLIQGGLADCVLFANRTNPIDKHVEVMINKYGLSPHPFAAQLFGHAGIEHMEKYGTKPEHFAKIGWKNHKHAVNNPYSQFQKEYSLDEVMSSQRIFEYLTILQCCPTSDGAAAAVLASEVFVQKNGLKSKAVEIVAQEMITDLPSSFEENSMIKVVGFDMSKEAARKCYEKSGLRPSDIDVIELHDCFSSNELFTYEALGLCPEGQGGKLVDDGDNTYGGKWVINPSGGLIAKGHPLGATGLAQCAELCWQLRGEAGKRQVPGAKVALQHNLGLGGAAVVTLYRMGFPEAARSPQVEAVPTSSTLDGFKANLVFKEIEKRLEEEGEQFVKKIGGIFAFKVKDGPEGREATWVVDVKNGKGAVLPNSDKKADCTITMSDSDLVALMMAFFQGKLKVLGNMGLAMKLQNLQLQPSKAKL", "length": 508, "header": "tr|F1S762-1|I3LEB7_PIG Computationally mapped isoform of Podocan OS=Sus scrofa OX=9823 GN=PODN PE=1 SV=4 CANONICAL=I3LEB7-1" }, "locus": { "chromosome": "6", "start_pos": 159297965, "end_pos": 159191048, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004265.4", "url": "https://www.ensembl.org/id/ENSSSCT00000004265.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004169.4", "url": "https://www.ensembl.org/id/ENSSSCP00000004169.4" } ] } }, { "isoform_ac": "I3LEB7-1", "url": "https://www.uniprot.org/uniprotkb/I3LEB7/entry#I3LEB7-1", "sequence": { "sequence": "MGTQFLLKRSPQVEAVPTSSTLDGFKANLVFKEIEKRLEEEGEQFVKKIGGIFAFKVKDGPEGREATWVVDVKNGKGAVLPNSGTMAQSRALLLLLLLPPQLPLGLVLAVRAPGFGRSGTHSPSHEENEFGEEEPVLVLSPQEPGRGPATIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPGELSRLHRLETLNLQNNRLTSRGLPEEAFEHLTNLNYLYLANNKLTLAPRFLPNALISVDFAANYLTKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEILILSSNFLRHVPKHLPPALYKLHLKNNKLEKIPPGVFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGLPRSLVLLHLEKNAIRCVDADVLTPIRSLEYLLLHSNQLRAQGIHPRAFQGLKRLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGRDDFATTYFLEELNLSYNRITSAQVHRDAFRKLRQLRSLDLSGNRLHTLPPGLPRNVHVLKIKRNELAALARGALAGMAQLRELYLTGNRLRSRALGPRAWADLAGLQLLDIAGNQLTEIPEGLPRSLEYLYLQNNKISAVLANAFDSTPNLKGIFLRFNKLAVGSVVDSAFRRLKHLQVLDIEGNFEFGDVSKDRGRVKEAEEDEDEDEEDEERR", "length": 697, "header": "tr|I3LEB7-1|I3LEB7_PIG Isoform 1 of Podocan OS=Sus scrofa OX=9823 GN=PODN PE=1 SV=3 CANONICAL=I3LEB7-1" }, "locus": { "chromosome": "6", "start_pos": 159210939, "end_pos": 159159163, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023638.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023638.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022404.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022404.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S762", "url": "https://www.uniprot.org/uniprotkb/F1S762" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ], "pmid": "" }, { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ], "pmid": "" }, { "name": "negative regulation of cell population proliferation", "id": "GO:0008285", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008285", "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": "https://www.uniprot.org/uniprotkb/I3LEB7" } ], "pmid": "" }, { "name": "negative regulation of cell migration", "id": "GO:0030336", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030336", "evidence": [ { "database": "UniProtKB", "id": "I3LEB7", "url": 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"Protein" ] }, { "id": "A0A5G2R284", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R284", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R284-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R284-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGB0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGB0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGB0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGB0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RHC2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RHC2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RHC2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RHC2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB89", "url": "https://www.uniprot.org/uniprotkb/I3LB89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB89-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GRR0", "url": "https://www.uniprot.org/uniprotkb/K7GRR0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GRR0-1", "url": "https://www.uniprot.org/uniprotkb/K7GRR0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKSTGWVLRWAVALLIAAVAAAVEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 845, "header": "tr|I3LB89-1|I3LB89_PIG Isoform 1 of Low-density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=2 CANONICAL=I3LB89-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q7C7-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89/entry#A0A5G2Q7C7-1", "sequence": { "sequence": "MSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 782, "header": "tr|A0A5G2Q7C7-1|A0A5G2Q7C7_PIG Computationally mapped isoform of Low-density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=1 CANONICAL=I3LB89-1" }, "locus": { "chromosome": "2", "start_pos": 69863146, "end_pos": 69839247, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091324.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091324.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059974.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059974.1" } ] } }, { "isoform_ac": "A0A5G2QFD9-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89/entry#A0A5G2QFD9-1", "sequence": { "sequence": "MKSTGWVLRWAVALLIAAVAAAVEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCLTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 675, "header": "tr|A0A5G2QFD9-1|A0A5G2QFD9_PIG Computationally mapped isoform of Low density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=2 CANONICAL=I3LB89-1" }, "locus": { "chromosome": "2", "start_pos": 69863146, "end_pos": 69828528, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081506.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081506.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060758.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060758.2" } ] } }, { "isoform_ac": "A0A5G2R284-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89/entry#A0A5G2R284-1", "sequence": { "sequence": "HKGTLWIHTLDSASNHDVKISHLEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 845, "header": "tr|A0A5G2R284-1|A0A5G2R284_PIG Computationally mapped isoform of Low-density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=2 CANONICAL=I3LB89-1" }, "locus": { "chromosome": "2", "start_pos": 69863146, "end_pos": 69838596, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068362.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068362.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071214.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071214.2" } ] } }, { "isoform_ac": "A0A5G2RGB0-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89/entry#A0A5G2RGB0-1", "sequence": { "sequence": "MKPGIKPSSVEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 832, "header": "tr|A0A5G2RGB0-1|A0A5G2RGB0_PIG Computationally mapped isoform of Low-density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=2 CANONICAL=I3LB89-1" }, "locus": { "chromosome": "2", "start_pos": 69863146, "end_pos": 69837463, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070645.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070645.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070219.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070219.2" } ] } }, { "isoform_ac": "A0A5G2RHC2-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89/entry#A0A5G2RHC2-1", "sequence": { "sequence": "MKLSFIALVQEELMAMEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 838, "header": "tr|A0A5G2RHC2-1|A0A5G2RHC2_PIG Computationally mapped isoform of Low-density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=1 CANONICAL=I3LB89-1" }, "locus": { "chromosome": "2", "start_pos": 69863146, "end_pos": 69836876, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069615.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069615.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070721.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070721.1" } ] } }, { "isoform_ac": "I3LB89-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89/entry#I3LB89-1", "sequence": { "sequence": "MKSTGWVLRWAVALLIAAVAAAVEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 845, "header": "tr|I3LB89-1|I3LB89_PIG Isoform 1 of Low-density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=2 CANONICAL=I3LB89-1" }, "locus": { "chromosome": "2", "start_pos": 69863146, "end_pos": 69828528, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029210.2", "url": "https://www.ensembl.org/id/ENSSSCT00000029210.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021308.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021308.2" } ] } }, { "isoform_ac": "K7GRR0-1", "url": "https://www.uniprot.org/uniprotkb/I3LB89/entry#K7GRR0-1", "sequence": { "sequence": "MKSTGWVLRWAVALLIAAVAAAVEEKCGRNEFQCRDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDLSDEQGCVNVTLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVAPAWFRGMGGAFLGTSLLGLGGLPPGGAGCQGPQAYCVTSPCPPPWVLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVTMSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQMVSLEDDVA", "length": 848, "header": "tr|K7GRR0-1|I3LB89_PIG Computationally mapped isoform of Low-density lipoprotein receptor OS=Sus scrofa OX=9823 GN=LDLR PE=3 SV=3 CANONICAL=I3LB89-1" }, "locus": { "chromosome": "2", "start_pos": 69863146, "end_pos": 69828528, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000033970.3", "url": "https://www.ensembl.org/id/ENSSSCT00000033970.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000030589.3", "url": "https://www.ensembl.org/id/ENSSSCP00000030589.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 145, "start_aa": "Thr", "end_pos": 145, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr145", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 147, "start_aa": "Thr", "end_pos": 147, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr147", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "K7GRR0", "url": "https://www.uniprot.org/uniprotkb/K7GRR0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8856825", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856825", "resource": "Reactome", "description": "Cargo recognition for clathrin-mediated endocytosis" }, { "id": "R-SSC-8856828", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856828", "resource": "Reactome", "description": "Clathrin-mediated endocytosis" }, { "id": "R-SSC-8964026", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8964026", "resource": "Reactome", "description": "Chylomicron clearance" }, { "id": "R-SSC-8964038", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8964038", "resource": "Reactome", "description": "LDL clearance" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 30, "go_terms": [ { "name": "negative regulation of microglial cell activation", "id": "GO:1903979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903979", "evidence": [ { "database": "UniProtKB", "id": "I3LB89", "url": "https://www.uniprot.org/uniprotkb/I3LB89" } ], "pmid": "" }, { "name": "positive regulation of lysosomal protein catabolic process", "id": "GO:1905167", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905167", "evidence": [ { "database": "UniProtKB", "id": "I3LB89", "url": "https://www.uniprot.org/uniprotkb/I3LB89" } ], "pmid": "" }, { "name": "retinoid metabolic process", "id": "GO:0001523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001523", "evidence": [ { "database": "UniProtKB", "id": "I3LB89", "url": 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"https://www.uniprot.org/uniprotkb/I3LBD3" } ] }, { "name": "TSSK4", "type": "synonym", "evidence": [ { "id": "NP_001274346", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274346" } ] } ], "protein_names": [ { "name": "Testis-specific serine/threonine-protein kinase 4", "type": "recommended", "evidence": [ { "id": "I3LBD3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBD3/entry#names_and_taxonomy" } ] }, { "name": "2.7.11.1", "type": "synonym", "evidence": [ { "id": "I3LBD3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBD3/entry#names_and_taxonomy" } ] }, { "name": "testis-specific serine/threonine-protein kinase 4", "type": "synonym", "evidence": [ { "id": "NP_001274346", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274346" } ] } ], "function": [ { "annotation": "Multi-tissue RT-PCR showed BMI TSSK1, TSSK3, and TSSK4 were only expressed in the testes and seminal vesicle, TSSK2 was confined to testes only, while TSSK6 was expressed widely in adult tissues but was highest in the testes. Publication Status: Online-Only", "evidence": [ { "database": "RefSeq", "id": "NP_001274346", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274346" }, { "database": "PubMed", "id": "26600552", "url": "https://glygen.org/publication/PubMed/26600552" } ] }, { "annotation": "Serine/threonine kinase which is involved in male germ cell development and in mature sperm function. May be involved in the Cre/Creb signaling pathway. Phosphorylates CREB1 on 'Ser-133' in vitro and can stimulate Cre/Creb pathway in cells. Phosphorylates CREM on 'Ser-116' in vitro. Phosphorylates ODF2 on 'Ser-95'.", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3#function" }, { "database": "UniProtKB", "id": "ARBA00055033", "url": "https://www.uniprot.org/uniprotkb/ARBA00055033#function" }, { "database": "UniProtKB", "id": "A0A287AY08", "url": "https://www.uniprot.org/uniprotkb/A0A287AY08#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TSSK4", "url": "https://www.uniprot.org/uniprotkb/I3LBD3", "locus": { "chromosome": "7", "start_pos": 75094926, "end_pos": 75106331, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025470", "url": "https://www.ensembl.org/id/ENSSSCG00000025470" } ] } } ], "crossref": [ { "id": "ENSSSCG00000025470", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025470", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd14162", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14162", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520622", "url": "https://www.ncbi.nlm.nih.gov/gene/100520622", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047908", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047908", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520622", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520622", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EWIQHYG", "url": "https://omabrowser.org/oma/group/EWIQHYG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AY08", "url": "https://www.orthodb.org/?gene=A0A287AY08", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LBD3", "url": "https://www.orthodb.org/?gene=I3LBD3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24346", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24346", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24346:SF56", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24346:SF56", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001274346", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274346", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AY08", "url": "https://www.uniprot.org/uniprotkb/A0A287AY08", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AY08-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AY08-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9T7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9T7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9T7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9T7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBD3-1", "url": "https://www.uniprot.org/uniprotkb/I3LBD3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKGDTLESAPPATAYRSVMEEYGYEVGKVIGNGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWIQRYGACSEPLAGKWFSQMTLGIAYLHSKGIVHRDLKLENLLLDKRENVKISDFGFAKMVPSNQPVRSSPSYRQMNCFNHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLKETQKEVTFPPSYAISQECKNLVLQTLRQATKRATILDIIKDPWVLKFQPEQATHEIRLLEAMCQPPSTTHRHQSLEIST", "length": 328, "header": "tr|I3LBD3-1|I3LBD3_PIG Isoform 1 of Testis-specific serine/threonine-protein kinase 4 OS=Sus scrofa OX=9823 GN=TSSK4 PE=3 SV=3 CANONICAL=I3LBD3-1" }, "isoforms": [ { "isoform_ac": "A0A287AY08-1", "url": "https://www.uniprot.org/uniprotkb/I3LBD3/entry#A0A287AY08-1", "sequence": { "sequence": "MGKGDTLESAPPATAYRSVMEEYGYEVGKVIGNGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWIQRYGACSEPLAGKWFSQMTLGIAYLHSKGIVHRLSAAGRDLKLENLLLDKRENVKISDFGFAKMVPSNQPVRSSPSYRQMNCFNHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLKETQKEVTFPPSYAISQECKNLVLQTLRQATKRATILDIIKDPWVLKFQPEQATHEIRLLEAMCQPPSTTHRHQSLEIST", "length": 334, "header": "tr|A0A287AY08-1|I3LBD3_PIG Computationally mapped isoform of Testis-specific serine/threonine-protein kinase 4 OS=Sus scrofa OX=9823 GN=TSSK4 PE=3 SV=1 CANONICAL=I3LBD3-1" }, "locus": { "chromosome": "7", "start_pos": 75097189, "end_pos": 75095029, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058153.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058153.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049028.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049028.2" } ] } }, { "isoform_ac": "A0A8W4F9T7-1", "url": "https://www.uniprot.org/uniprotkb/I3LBD3/entry#A0A8W4F9T7-1", "sequence": { "sequence": "MGKGDTLESAPPATAYRSVMEEYGYEVGKVIGNGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQNLVLQTLRQATKRATILDIIKDPWVLKFQPEQATHEIRLLEAMCQPPSTTHRHQSLEIST", "length": 135, "header": "tr|A0A8W4F9T7-1|I3LBD3_PIG Computationally mapped isoform of Testis-specific serine/threonine-protein kinase 4 OS=Sus scrofa OX=9823 GN=TSSK4 PE=3 SV=1 CANONICAL=I3LBD3-1" }, "locus": { "chromosome": "7", "start_pos": 75097189, "end_pos": 75095029, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102930.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102930.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076040.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076040.1" } ] } }, { "isoform_ac": "I3LBD3-1", "url": "https://www.uniprot.org/uniprotkb/I3LBD3/entry#I3LBD3-1", "sequence": { "sequence": "MGKGDTLESAPPATAYRSVMEEYGYEVGKVIGNGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWIQRYGACSEPLAGKWFSQMTLGIAYLHSKGIVHRDLKLENLLLDKRENVKISDFGFAKMVPSNQPVRSSPSYRQMNCFNHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLKETQKEVTFPPSYAISQECKNLVLQTLRQATKRATILDIIKDPWVLKFQPEQATHEIRLLEAMCQPPSTTHRHQSLEIST", "length": 328, "header": "tr|I3LBD3-1|I3LBD3_PIG Isoform 1 of Testis-specific serine/threonine-protein kinase 4 OS=Sus scrofa OX=9823 GN=TSSK4 PE=3 SV=3 CANONICAL=I3LBD3-1" }, "locus": { "chromosome": "7", "start_pos": 75097189, "end_pos": 75095029, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023352.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023352.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021352.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021352.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Cloning, sequence characterization, and expression patterns of members of the porcine TSSK family.", "journal": "Genetics and molecular research : GMR", "date": "2015-11-23", "authors": "Wang P, Huo H L, Wang S Y, Miao Y W, Zhang Y Y, Zhang Q L, Li F Q, Liu L X, Li W Z, Zeng Y Z, Huo J L, Xiao H", "evidence": [ { "database": "RefSeq", "id": "NP_001274346", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274346" } ], "reference": [ { "type": "PubMed", "id": "26600552", "url": "https://glygen.org/publication/PubMed/26600552" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AY08", "url": "https://www.uniprot.org/uniprotkb/A0A287AY08" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520622", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520622", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2QC55-1", "protein_name": "Testis-specific serine/threonine-protein kinase 4", "gene_name": "Tssk4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKGDTSETASATPAYRSVMEEYGYEVGKVIGHGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWIQRYGACSETLAGKWFSQMALGIAYLHSKGIVHRLTPSLSAAGRDLKLENLLLDKRENVKISDFGFAKMVPSSQPVRSSPSYRQMNCLSHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLRETQKEVTFPANLTISQECKGSSIKPGPQPPSPE", "length": 292 }, "evidence": [ { "id": "I3LBD3", "url": "https://omabrowser.org/oma/group/I3LBD3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7KFV8-1", "protein_name": "Testis-specific serine/threonine-protein kinase 4", "gene_name": "Tssk4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGKGDTLETASLTPAYRSVMEEYGYEVGKIIGHGSYGTVYEAYYTKQKVMVAVKIISKKKASDDYLNKFLPREIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWIQRYGACSETLAGKWFSQMALGIAYLHSKGIVHRLTPSLSAAGRDLKLENLLLDKRENVKISDFGFSKMVMVPSNQPVRSSPSYLQMSGLSHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVAHLPFDDTNLKKLLRETQKEVMFPTNLSVSLECKNLIFQMLRQAAKRANILDVLKDPWMLKFQSEQPTNEIRMLEAMCQPTTSTTNRHKSLEVTV", "length": 341 }, "evidence": [ { "id": "I3LBD3", "url": "https://omabrowser.org/oma/group/I3LBD3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F6RLA2-1", "protein_name": "Testis-specific serine/threonine-protein kinase 4", "gene_name": "TSSK4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGKGDMEAPPTSAYRSVMEEYGYEVGKVIGNGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWIQRYGACSEPLAGKWFSQLTLGIAYLHSKGIVHRDLKLENLLLDKRENVKISDFGFAKMVPSNQSVRNSPSYRQMNCFSHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLKETQKEVTFPPNYAISQECKNLILQTLRQAPKRATILDIIKDPWVLKFQPEQPTHEIRLLEAMCQPPSTTNRHQSLEIST", "length": 326 }, "evidence": [ { "id": "I3LBD3", "url": "https://omabrowser.org/oma/group/I3LBD3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6SA08-1", "protein_name": "Testis-specific serine/threonine-protein kinase 4", "gene_name": "TSSK4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGKGDVLEAAPTTTAYHSLMDEYGYEVGKAIGHGSYGSVYEAFYTKQKVMVAVKIISKKKASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQGGDVLEWIQRYGACSEPLAGKWFSQLTLGIAYLHSKSIVHRDLKLENLLLDKWENVKISDFGFAKMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILYTLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLRQATKRATILDIIKDSWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT", "length": 328 }, "evidence": [ { "id": "I3LBD3", "url": "https://omabrowser.org/oma/group/I3LBD3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D411-1", "protein_name": "Testis-specific serine/threonine-protein kinase 4", "gene_name": "Tssk4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGKGDTSETASATPAYRSVMEEYGYEVGKIIGHGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWIQRYGACAETLAGKWFSQMALGIAYLHSKGIVHRDLKLENLLLDKRENVKISDFGFAKMVPSSQPVHSSPSYRQMNSLSHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLRETQKEVTFPANLTISQECKNLILQLLRQSTKRATILDVLRDPWMLKFQPEQPSNEIRLLEAMYQPTSSAKRHQSLEITT", "length": 328 }, "evidence": [ { "id": "I3LBD3", "url": "https://omabrowser.org/oma/group/I3LBD3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "protein-containing complex binding", "id": "GO:0044877", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044877", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "fertilization", "id": "GO:0009566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009566", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "flagellated sperm motility", "id": "GO:0030317", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030317", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "spermatid development", "id": "GO:0007286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007286", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": "https://www.uniprot.org/uniprotkb/I3LBD3" } ], "pmid": "" }, { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "I3LBD3", "url": 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"database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231558" } ] }, { "name": "phospholipase B-like 1", "type": "synonym", "evidence": [ { "id": "NP_001231558", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231558" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLBD1", "url": "https://www.uniprot.org/uniprotkb/I3LCG5", "locus": { "chromosome": "5", "start_pos": 58022058, "end_pos": 57948779, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000057970", "url": "https://www.ensembl.org/id/ENSSSCG00000057970" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026724", "url": 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"https://www.uniprot.org/uniprotkb/I3LCG5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSRRSRDGRLGLPAPPAPLLLLLLLAAAVPPSLAGVYYATAYWMPTEKRMLVKNVLDRNGDAYGFYNDSMKTTGWGILEIRAGYGSQSLSNNIIMFAAGYLEGYLTAPHIYDHFTNLYPQLIKKSSVLDKVQDFLRKQDQWTRDNIKNYKNDPFWRHTGYVMAQMDGLYVGAMKRAVSEGRKPITLFQIQFLNAVGDLLDLIPSLSPINYSDLKVFKRWDMGHCSALIKVLPGFENIFFAHSSWYTYAAMLRIYKHWDFNIIDKDTSSSRLSFSSYPGFLESLDDFYLLGSGLVLLQTTNSVYNKTLMKQVVPQSLLAWQRVRVANMMASGGKQWAEVFSKYNSGTYNNQYMVLDLKKVNLNYGLGKGTLYIVEQIPTYVEYSEQTDVLKRGYWPSYNIPFHEKIYNWSGYPMLVKKLGLDFSYALASRAKIFRRDQGKVTDMESMKYIMRYNNYKKEPYSKGDPCNTICCREDLNELNPSPGGCYDTKVADIHLASTYTAYAISGPTVQDGLPVFHWNHFNKTLHEGMPEAYNFDFITMKPTL", "length": 544, "header": "tr|I3LCG5-1|I3LCG5_PIG Isoform 1 of Phospholipase B domain containing 1 OS=Sus scrofa OX=9823 GN=PLBD1 PE=1 SV=2 CANONICAL=I3LCG5-1" }, "isoforms": [ { "isoform_ac": "A0A8D0N2Y4-1", "url": "https://www.uniprot.org/uniprotkb/I3LCG5/entry#A0A8D0N2Y4-1", "sequence": { "sequence": "MKSWSQEGPMRGVYYATAYWMPTEKRMLVKNVLDRNGDAYGFYNDSMKTTGWGILEIRAGYGSQSLSNNIIMFAAGYLEGYLTAPHIYDHFTNLYPQLIKKSSVLDKVQDFLRKQDQWTRDNIKNYKNDPFWRHTGYVMAQMDGLYVGAMKRAVSEGRKPITLFQIQFLNAVGDLLDLIPSLSPINYSDLKVFKRWDMGHCSALIKVLPGFENIFFAHSSWYTYAAMLRIYKHWDFNIIDKDTSSSRLSFSSYPGFLESLDDFYLLGSGLVLLQTTNSVYNKTLMKQVVPQSLLAWQRVRVANMMASGGKQWAEVFSKYNSGTYNNQYMVLDLKKVNLNYGLGKGTLYIVEQIPTYVEYSEQTDVLKRGYWPSYNIPFHEKIYNWSGYPMLVKKLGLDFSYALASRAKIFRRDQGKVTDMESMKYIMRYNNYKKEPYSKGDPCNTICCREDLNELNPSPGGCYDTKVADIHLASTYTAYAISGPTVQDGLPVFHWNHFNKTLHEGMPEAYNFDFITMKPTL", "length": 521, "header": "tr|A0A8D0N2Y4-1|I3LCG5_PIG Computationally mapped isoform of Phospholipase B domain containing 1 OS=Sus scrofa OX=9823 GN=PLBD1 PE=1 SV=1 CANONICAL=I3LCG5-1" }, "locus": { "chromosome": "5", "start_pos": 58021932, "end_pos": 57949104, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049910.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049910.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052139.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052139.1" } ] } }, { "isoform_ac": "I3LCG5-1", "url": "https://www.uniprot.org/uniprotkb/I3LCG5/entry#I3LCG5-1", "sequence": { "sequence": "MSRRSRDGRLGLPAPPAPLLLLLLLAAAVPPSLAGVYYATAYWMPTEKRMLVKNVLDRNGDAYGFYNDSMKTTGWGILEIRAGYGSQSLSNNIIMFAAGYLEGYLTAPHIYDHFTNLYPQLIKKSSVLDKVQDFLRKQDQWTRDNIKNYKNDPFWRHTGYVMAQMDGLYVGAMKRAVSEGRKPITLFQIQFLNAVGDLLDLIPSLSPINYSDLKVFKRWDMGHCSALIKVLPGFENIFFAHSSWYTYAAMLRIYKHWDFNIIDKDTSSSRLSFSSYPGFLESLDDFYLLGSGLVLLQTTNSVYNKTLMKQVVPQSLLAWQRVRVANMMASGGKQWAEVFSKYNSGTYNNQYMVLDLKKVNLNYGLGKGTLYIVEQIPTYVEYSEQTDVLKRGYWPSYNIPFHEKIYNWSGYPMLVKKLGLDFSYALASRAKIFRRDQGKVTDMESMKYIMRYNNYKKEPYSKGDPCNTICCREDLNELNPSPGGCYDTKVADIHLASTYTAYAISGPTVQDGLPVFHWNHFNKTLHEGMPEAYNFDFITMKPTL", "length": 544, "header": "tr|I3LCG5-1|I3LCG5_PIG Isoform 1 of Phospholipase B domain containing 1 OS=Sus scrofa OX=9823 GN=PLBD1 PE=1 SV=2 CANONICAL=I3LCG5-1" }, "locus": { "chromosome": "5", "start_pos": 58021932, "end_pos": 57951326, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032057.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032057.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021740.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021740.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0N2Y4", "url": "https://www.uniprot.org/uniprotkb/A0A8D0N2Y4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155493", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155493", "resource": "KEGG Pathway" }, { "id": "R-SSC-1482788", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482788", "resource": "Reactome", "description": "Acyl chain remodelling of PC" }, { "id": "R-SSC-1482839", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482839", "resource": "Reactome", "description": "Acyl chain remodelling of PE" }, { "id": "R-SSC-1482922", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1482922", "resource": "Reactome", "description": "Acyl chain remodelling of PI" }, { "id": "R-SSC-1483115", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483115", "resource": "Reactome", "description": "Hydrolysis of LPC" } ], "orthologs": [ { "uniprot_canonical_ac": "Q54PS7-1", "protein_name": "Phospholipase B-like protein D", "gene_name": "plbD", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIIFKNLLKLLIILLTIKLYFCIEIKREEHLTILNELNENSDVIQYSILPGNNEEYEIVKGIQEDAIVYGYYMSNVEVNGWAYLSLVSNDKYNDSTQSRAFGYLEGYLTKDLIWNSKVNYYKNAFNSSEIPNKLDDWLTENIESIHTFIVNNRKSRYWNQITLVMDQINGMLDGYNEANTNSSETLSLHDFFVLNMFGDLFDLMPALNLDKEYKYFQKDLNDIQDWFKRSQHCSALIKVSSDYSELYSGHTTWSGYYTMLRIFKSYNQQFSSDVSGTLSKRNIFSSYPGALISVDDFYLLGDTRMVVIETTNSLVTNDLYHLIRPTTVLSWMRVIVSNRMSTNGKEWCENFQRYNSGTYNNQWMIVSYNLFVPYNELKDGALYVLEQIPGYIEFSDQTQALRQGWWNSYNIPFYETIYDASGYNNYTANNYSDSTIYYMSYQTCPRAEIFRNFAGYVESLEDFQSLLRYNDFEYDPLSHKLPFYAIASRYDLSKKNPSPFGATDTKVTCNSMIDQNTIVAISGPTTSNGQPIFEWNSKIDFMESTSHLGCPEKYNFPWVSFSDTTFRNL", "length": 569 }, "evidence": [ { "id": "I3LCG5", "url": "https://omabrowser.org/oma/group/I3LCG5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5U2V4-1", "protein_name": "Lysosomal leucine aminopeptidase", "gene_name": "Plbd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCHRSHGRSLRPPSPLLLLLPLLLQSPWAAGAAEKHNSAGVHYATAYWLPDTKAVEIKMVLDKKGDAYGFYNDSIQTTGWGVLEIKAGYGSQILSNEIIMFLAGYLEGYLTALHMYDHFTNLYPQLIKNPSIVKKVQDFMEKQELWTRKNIKDQKDDPFWRHTGYVVSQLDGMYLGAQKRASEEEMKPMTMFQIQFLNAVGDLLDLIPSLSPTKSSSLKKFKIWEMGHCSALIKVLPGFENIYFAHSSWYTYAAMLRIYKHWDFNIKDKYTASNRLSFSSYPGFLESLDDFYILSSGLILLQTTNSVYNKTLLKLVVPESLLAWQRVRVANMMAQGGKEWSQLFSMYNSGTYNNQYMVLDLKKVTLKKSIDRGALYVVEQIPTYVEYSDQTNILRKGYWASYNIPFHKTVYNWSGYPLLVHKLGLDYSYDLAPRAKIFRRDQGTVTDMASMKHIMRYNNYKVDPYSKGDPCSTICCREDLNEASPSPGGCYDTKVADIFLASQYKAYAISGPTVQNGLPPFNWNRFNDTLHQGMPDVFDFDFVTMKPILT", "length": 550 }, "evidence": [ { "id": "I3LCG5", "url": "https://omabrowser.org/oma/group/I3LCG5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6P4A8-1", "protein_name": "Lysosomal leucine aminopeptidase", "gene_name": "PLBD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTRGGPGGRPGLPQPPPLLLLLLLLPLLLVTAEPPKPAGVYYATAYWMPAEKTVQVKNVMDKNGDAYGFYNNSVKTTGWGILEIRAGYGSQTLSNEIIMFVAGFLEGYLTAPHMNDHYTNLYPQLITKPSIMDKVQDFMEKQDKWTRKNIKEYKTDSFWRHTGYVMAQIDGLYVGAKKRAILEGTKPMTLFQIQFLNSVGDLLDLIPSLSPTKNGSLKVFKRWDMGHCSALIKVLPGFENILFAHSSWYTYAAMLRIYKHWDFNVIDKDTSSSRLSFSSYPGFLESLDDFYILSSGLILLQTTNSVFNKTLLKQVIPETLLSWQRVRVANMMADSGKRWADIFSKYNSGTYNNQYMVLDLKKVKLNHSLDKGTLYIVEQIPTYVEYSEQTDVLRKGYWPSYNVPFHEKIYNWSGYPLLVQKLGLDYSYDLAPRAKIFRRDQGKVTDTASMKYIMRYNNYKKDPYSRGDPCNTICCREDLNSPNPSPGGCYDTKVADIYLASQYTSYAISGPTVQGGLPVFRWDRFNKTLHQGMPEVYNFDFITMKPILKLDIK", "length": 553 }, "evidence": [ { "id": "I3LCG5", "url": "https://omabrowser.org/oma/group/I3LCG5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "phospholipase activity", "id": "GO:0004620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004620", "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "pmid": "" }, { "name": "lysosomal protein catabolic process", "id": "GO:1905146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905146", "evidence": [ { "database": "UniProtKB", "id": "I3LCG5", "url": "https://www.uniprot.org/uniprotkb/I3LCG5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 209, "end_pos": 211, "annotation": "n_glycosylation_sequon" }, { "start_pos": 304, "end_pos": 306, "annotation": "n_glycosylation_sequon" }, { "start_pos": 407, "end_pos": 409, "annotation": "n_glycosylation_sequon" }, { "start_pos": 522, "end_pos": 524, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 209, "end_pos": 211 }, { "start_pos": 304, "end_pos": 306 }, { "start_pos": 407, "end_pos": 409 }, { "start_pos": 522, "end_pos": 524 }, { "start_pos": 67, "end_pos": 69 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LK18-1", "uniprot_ac": "I3LK18", "uniprot_id": "I3LK18_PIG", "mass": { "chemical_mass": 74133.0, "monoisotopic_mass": 74133.0 }, "refseq": { "ac": "XP_020940493", "name": "polycystic kidney disease 2-like 2 protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940493" }, "gene_names": [ { "name": "PKD2L2", "type": "recommended", "evidence": [ { "id": "I3LK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ] }, { "name": "PKD2L2", "type": "synonym", "evidence": [ { "id": "XP_020940493", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940493" } ] } ], "protein_names": [ { "name": "Polycystin-2-like protein 2", "type": "recommended", "evidence": [ { "id": "I3LK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK18/entry#names_and_taxonomy" } ] }, { "name": "Polycystic kidney disease 2-like 2 protein", "type": "synonym", "evidence": [ { "id": "I3LK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK18/entry#names_and_taxonomy" } ] }, { "name": "Polycystin-L2", "type": "synonym", "evidence": [ { "id": "I3LK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK18/entry#names_and_taxonomy" } ] }, { "name": "polycystic kidney disease 2-like 2 protein", "type": "synonym", "evidence": [ { "id": "XP_020940493", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940493" } ] } ], "function": [ { "annotation": "Exhibits a lower single conductance but no spontaneous channel activity. May function as a regulator of calcium channels or a channel component involving Ca2(+) homeostasis.", "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18#function" }, { "database": "UniProtKB", "id": "ARBA00055572", "url": "https://www.uniprot.org/uniprotkb/ARBA00055572#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PKD2L2", "url": "https://www.uniprot.org/uniprotkb/I3LK18", "locus": { "chromosome": "2", "start_pos": 139956432, "end_pos": 139920583, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026421", "url": "https://www.ensembl.org/id/ENSSSCG00000026421" } ] } } ], "crossref": [ { "id": "I3LK18", "url": "https://alphafold.ebi.ac.uk/entry/I3LK18", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026421", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026421", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22265", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22265", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520011", "url": "https://www.ncbi.nlm.nih.gov/gene/100520011", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013122", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013122", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046791", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046791", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051223", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051223", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520011", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520011", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MVDFWKF", "url": "https://omabrowser.org/oma/group/MVDFWKF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LK18", "url": "https://www.orthodb.org/?gene=I3LK18", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10877", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10877", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10877:SF47", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10877:SF47", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08016", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08016", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20519", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20519", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020940493", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020940493", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R5D9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5D9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5D9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5D9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0NIB1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0NIB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0NIB1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0NIB1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9C9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9C9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9C9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9C9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK18-1", "url": "https://www.uniprot.org/uniprotkb/I3LK18-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEASRWHLGGTPKPKLQYRKDVEIRTTLQELLLYLIFLINLCILTFGMVNPHMYYLNKVMASLFLDTSVPGEERTNFRSIRSITDFWKFMEGPFLEGLYWDSWYNSNDLYDLKNTSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMNECYDKYTSKNEDLSDFGLKSDSEWKYSTPNRSSPWHWGFVGIYRNGGYIFTLSKSKSETRSKFINLRLNSWITRSTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSNYDYFIASCEITFCIFLIVFTTQEIQKMREFKSAYFQSIWNWLELLLLVLCFVAIAFNVYCNIQISLLLGQLLKNTEKYSDFYFLAYWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCMKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIILGDFNFAGIQQANRILGPIYFITFIFFVFFVLLNMFLAIINDTYAEVKADYSIGRRPDFELGKMIKKSYNNALEKLKLKKAQKDESKESKKSEDLAEQARREGFDETEIQSAEKMKKWKERLEKKYYSTEIQDDYQPVTQQEFRDLFLYAVELEKELHYVSLKLNRVMRKVSALQY", "length": 626, "header": "tr|I3LK18-1|I3LK18_PIG Isoform 1 of Polycystin-2-like protein 2 OS=Sus scrofa OX=9823 GN=PKD2L2 PE=3 SV=4 CANONICAL=I3LK18-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R5D9-1", "url": "https://www.uniprot.org/uniprotkb/I3LK18/entry#A0A5G2R5D9-1", "sequence": { "sequence": "MAEASRWHLGGTPKPKLQYRKDVEIRTTLQELLLYLIFLINLCILTFGMVNPHMYYLNKVMASLFLDTSVPGEERTNFRSIRSITDFWKFMEGPFLEGLYWDSWYNSNDLYDLKNTSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMNECYDKYTSKNEDLSDFGLKSDSEWKYSTPNRSSPWHWGFVGIYRNGGYIFTLSKSKSETRSKFINLRLNSWITRSTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSNYDYFIASCEITFCIFLIVFTTQEIQKMREFKSAYFQSIWNWLELLLLVLCFVAIAFNVYCNIQISLLLGQLLKNTEKYSDFYFLAYWHIYYNNIIAITIFFAWIKNMFLAIINDTYAEVKADYSIGRRPDFELGKMIKKSYNNALEKLKLKKAQKDESKESKKSEDLAEQARREGFDETEIQSAEKMKKWKERLEKKYYSTEIQDDYQPVTQQEFRDLFLYAVELEKELHYVSLKLNRVMRKVSALQY", "length": 525, "header": "tr|A0A5G2R5D9-1|I3LK18_PIG Computationally mapped isoform of Polycystin-2-like protein 2 OS=Sus scrofa OX=9823 GN=PKD2L2 PE=3 SV=2 CANONICAL=I3LK18-1" }, "locus": { "chromosome": "2", "start_pos": 139956418, "end_pos": 139920632, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084488.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084488.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072444.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072444.2" } ] } }, { "isoform_ac": "A0A8D0NIB1-1", "url": "https://www.uniprot.org/uniprotkb/I3LK18/entry#A0A8D0NIB1-1", "sequence": { "sequence": "MAEASRWHLGGTPKPKLQYRKDVEIRTTLQELLLYLIFLINLCILTFGMVNPHMYYLNKVMASLFLDTSVPGEERTNFRSIRSITDFWKFMEGPFLEGLYWDSWYNSNDLYDLKNTSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMNECYDKYTSKNEDLSDFGLKSDSEWKYSTPNRSSPWHWGFVGIYRNGGYIFTLSKSKSETRSKFINLRLNSWITRSTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSNYDYFIASCEITFCIFLIVFTTQEIQKMREFKSAYFQSIWNWLELLLLVLCFVAIAFNVYCNIQISLLLGQLLKNTEKYSDFYFLAYWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCMKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIILGDFNFAGIQQANRILGPIYFITFIFFVFFVLLNMFLAIINDTYAEVKADYSIGRRPDFELGKMIKKSYNNALEKLKLKKAQKDESKESAEKMKKWKERLEKKYYSTEIQDDYQPVTQQEFRDLFLYAVELEKELHYVSLKLNRVMRKVSALQY", "length": 604, "header": "tr|A0A8D0NIB1-1|I3LK18_PIG Computationally mapped isoform of Polycystin-2-like protein 2 OS=Sus scrofa OX=9823 GN=PKD2L2 PE=3 SV=1 CANONICAL=I3LK18-1" }, "locus": { "chromosome": "2", "start_pos": 139956418, "end_pos": 139920632, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074314.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074314.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066311.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066311.2" } ] } }, { "isoform_ac": "A0A8W4F9C9-1", "url": "https://www.uniprot.org/uniprotkb/I3LK18/entry#A0A8W4F9C9-1", "sequence": { "sequence": "MVNPHMYYLNKVMASLFLDTSVPGEERTNFRSIRSITDFWKFMEGPFLEGLYWDSWYNSNDLYDLKNTSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMNECYDKYTSKNEDLSDFGLKSDSEWKYSTPNRSSPWHWGFVGIYRNGGYIFTLSKSKSETRSKFINLRLNSWITRSTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSNYDYFIASCEITFCIFLIVFTTQEIQKMREFKSAYFQSIWNWLELLLLVLCFVAIAFNVYCNIQISLLLGQLLKNTEKYSDFYFLAYWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCMKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIILGDFNFAGIQQANRILGPIYFITFIFFVFFVLLNMFLAIINDTYAEVKADYSIGRRPDFELGKMIKKKSEDLAEQARREGFDETEIQSAEKMKKWKERLEKKYYSTEIQDDYQPVTQQEFRDLFLYAVELEKELHYVSLKLNRVMRKVSALQY", "length": 555, "header": "tr|A0A8W4F9C9-1|I3LK18_PIG Computationally mapped isoform of Polycystin-2-like protein 2 OS=Sus scrofa OX=9823 GN=PKD2L2 PE=3 SV=1 CANONICAL=I3LK18-1" }, "locus": { "chromosome": "2", "start_pos": 139956418, "end_pos": 139924212, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093491.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093491.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075931.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075931.1" } ] } }, { "isoform_ac": "I3LK18-1", "url": "https://www.uniprot.org/uniprotkb/I3LK18/entry#I3LK18-1", "sequence": { "sequence": "MAEASRWHLGGTPKPKLQYRKDVEIRTTLQELLLYLIFLINLCILTFGMVNPHMYYLNKVMASLFLDTSVPGEERTNFRSIRSITDFWKFMEGPFLEGLYWDSWYNSNDLYDLKNTSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMNECYDKYTSKNEDLSDFGLKSDSEWKYSTPNRSSPWHWGFVGIYRNGGYIFTLSKSKSETRSKFINLRLNSWITRSTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSNYDYFIASCEITFCIFLIVFTTQEIQKMREFKSAYFQSIWNWLELLLLVLCFVAIAFNVYCNIQISLLLGQLLKNTEKYSDFYFLAYWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCMKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIILGDFNFAGIQQANRILGPIYFITFIFFVFFVLLNMFLAIINDTYAEVKADYSIGRRPDFELGKMIKKSYNNALEKLKLKKAQKDESKESKKSEDLAEQARREGFDETEIQSAEKMKKWKERLEKKYYSTEIQDDYQPVTQQEFRDLFLYAVELEKELHYVSLKLNRVMRKVSALQY", "length": 626, "header": "tr|I3LK18-1|I3LK18_PIG Isoform 1 of Polycystin-2-like protein 2 OS=Sus scrofa OX=9823 GN=PKD2L2 PE=3 SV=4 CANONICAL=I3LK18-1" }, "locus": { "chromosome": "2", "start_pos": 139956418, "end_pos": 139920632, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027943.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027943.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024432.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024432.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0NIB1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0NIB1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520011", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520011", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MJ88-1", "protein_name": "Polycystin-2-like protein 2", "gene_name": "Pkd2l2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEASWWYRGGTSKHDLHYRREAEVNTTFEELLLYFIFLITLCILTFGMVNPHMYYLNKVMSSLFVDTALPDDEKSSFRSIRSITDFWKFVEGPLLEGLYWDSWYNNQKLYNLKNSSRIYYENVLLGVPRVRQLRVRNNTCKVYSAFKSLISDCYGKYTTENEEVSDFGLKNDTEWKYSTSPANAPWHWGFVGVYRDGGYMFTLSKSKSHTQTKLIDLRLNSWITRGTRVVFIDFSLYNANINLFCIVRLVAEFPATGGLLTSWQFYSVKLLRYVTHYDYFIASCEIIFCIFLFVFITQELRKLNELKSAYFKSIWNWLEMLLLALCFLAVSFYAYCHMQNFLLLERLLKNTENYPNFYFLAYWHIYYNNIIAITIFFAWIKIFKFISFNETMSQLSSTLSRCMKDIVGFAIMFFIIFSAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANWILGPIYFITFIFFVFFVLLNMFLAIINDTYSEVKADYAIGRRPDFELGKIIKKSYFNVLEKLGLKKAQDNEDKKMKTTGDLAQQARKEGFNESEIQQAEHMKTWKERLEKKYYSTEIQDDYQPVTQQEFRELFLYAVELEKELHYISLKLNQVMRKLQ", "length": 622 }, "evidence": [ { "id": "I3LK18", "url": "https://omabrowser.org/oma/group/I3LK18/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0YL71-1", "protein_name": "Polycystin 2 like 2, transient receptor potential cation channel", "gene_name": "PKD2L2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPAAALQPVVAVRRSGGGATTARVSYSKERELKTTLLELLIYITFLVTLSLMTFGMVSTNMYYLNKVMEDLFVEQTSSESSGINFRSIKSQADFWEFAEGPLLDGLYWSTWYDNRTVTDLKNASYIFYENLLLGVAQIRQLKVRNNTCSIYPYFQPFLKSCYSRYSYKAEDKSDFGLKDEPEWKYVSASSFSPWYWGSVGFYRSGGFIVTLPRSKQESMEKLASLRKNGWITHGTRAVFIDFSTFNANINLFCIVRLVVEFPATGGALTSFQIHSVKLLRYVSYYDYFLASCEVAFCLFILTFIIQEAIEITRLKMEYFRSAWNWLDMLLIAVSILAICFNIYRTIEVSLLMEELLSNAHVYPDFYFLAFWQVIYDNVIAINVFFAWIKIFKYVSFSKTMTQLSSTLSRCAKDIIGFAIMFFIIFIAYAQFSHLVFGPQVDDFSTFQNCIFSQFRIVLGDFNFESLEVNSILGPIYYISFVFFVFFVLLNMFLAIINDTYSEVKADFAVIPNEELHIADLFRQSYNKALVKLKLRKPETDLGDENLERSKEFPSTKRKDTSKPSKGGSPHEKRHPKPPKLQKESLHRSDSVAASQSSVSPEEFQRLLRQTSELEKELNSANAKLSRIMKSMQQLKNASGKTTQ", "length": 644 }, "evidence": [ { "id": "I3LK18", "url": "https://omabrowser.org/oma/group/I3LK18/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A828-1", "protein_name": "Polycystin-2-like protein 2", "gene_name": "Pkd2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEATWWHRGGTSKHDLHYRREAEVNTTLEELLLYFIFLINLCILTFGTVNPHMYYLNKVMSSLFVDTSLPDDERSSFRSIRSITEFWKFMEGPLVEGLYWDSWYGNTQLDSVKNSSLIYYENILLGVPRVRQLRVRNSTCQVYPAFQSLASDCYNKYTAENEDFSDFGLKHDPEWRHSAPSSTAPWHWGFVGVYRDGGYMVTLSKSKSETKAKLADLRQNNWIGRGTRAVFIDFSLYNANVNLFCIIRLLAEFPATGGILTSWQFYSVKLIRYVSYYDHFIASCEIIFCIFLLVFITQELRKLNEFKSAYFRSVWNWIELLLLVLCFLAVSFYAYCNVQCFLLLGQLLRSTESYPDFYFLAYWHIYYNNIIAITIFFAWIKIFKFISFNETMSQLSSTLSRCMKDIVGFAIMFFIIFFAYAQLAFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANWILGPIYFITFIFFVFFVLLNMFLAIINDTYSEVKADYSIGRRPDFELGSIIKKSCFNILEKLRLRKAQNNEDKKMKTSVDLAQARKEGFDESEIQEARQMKRWKERLEKKYYSTEIQDDYQPVTQQEFRELFLYAVELEKELHYLSLKLNQVMRKLH", "length": 621 }, "evidence": [ { "id": "I3LK18", "url": "https://omabrowser.org/oma/group/I3LK18/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9JLG4-1", "protein_name": "Polycystin-2-like protein 2", "gene_name": "Pkd2l2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSEATWWYRGGTSKHDLHYRREAEVNTTLEELLLYFIFLINLCILTFGMVNPHMYYLNKVMSSLFVDTSLPDDERSSFRSIRSITEFWKFMEGPLIDGLYWDSWYGNKQLYSVKNSSRIYYENVLLGIPRVRQLRVRNNTCKVYPAFQSLVSDCYSKYTVENEDFSDFGLKRNPEWTHTPSSRTAPWHWGFVGVYRDGGYIVTLSKSKSETKAKFVDLRLNNWISRGTRAVFIDFSLYNANVNLFCIIRLLAEFPATGGLLTSWQFYSVKLLRYVSYYDYFIASCEVIFCIFLFVFIIQELRKVNEFKSAYFRSVWNWLEMLLLLLCFLAVSFYAYCNMQSFLLLGQLLKNTDSYPDFYFLAYWHIYYNNVIAITIFFAWIKIFKFISFNETMSQLSSTLSRCMKDIVGFAIMFFIIFSAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANWILGPIYFITFIFFVFFVLLNMFLAIINDTYSEVKADYSIGRRPDFELGKIIQKSCFNVLEKLRLKKAQAKEEKKMQTTDLAQRARRDGFDESEIQEAEQMKRWKERLEKKYYSTEIQDDYQPVTQQEFRELFLYAVELEKELHYVSLKLNQLMRKLH", "length": 621 }, "evidence": [ { "id": "I3LK18", "url": "https://omabrowser.org/oma/group/I3LK18/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NZM6-1", "protein_name": "Polycystin-2-like protein 2", "gene_name": "PKD2L2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKVMSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYSTSNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQEVKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYFLACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANPILGPIYFITFIFFVFFVLLNMFLAIINDTYSEVKADYSIGRRLDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYAVELEKELHYINLKLNQVVRKVSAL", "length": 624 }, "evidence": [ { "id": "I3LK18", "url": "https://omabrowser.org/oma/group/I3LK18/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "monoatomic ion transmembrane transport", "id": "GO:0034220", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034220", "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ], "pmid": "" }, { "name": "detection of mechanical stimulus", "id": "GO:0050982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050982", "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ], "pmid": "" }, { "name": "calcium channel activity", "id": "GO:0005262", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005262", "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "ciliary membrane", "id": "GO:0060170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060170", "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LK18", "url": "https://www.uniprot.org/uniprotkb/I3LK18" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 115, "end_pos": 117, "annotation": "n_glycosylation_sequon" }, { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 182, "end_pos": 184, "annotation": "n_glycosylation_sequon" }, { "start_pos": 390, "end_pos": 392, "annotation": "n_glycosylation_sequon" }, { "start_pos": 491, "end_pos": 493, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LK18-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 626, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LK18-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LK18" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK18" }, { "id": "PF20519", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20519" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Polycystin", "eco_id": "ECO_0000259", "start_pos": 78, "end_pos": 272, "start_aa": "Phe", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LK18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK18" }, { "id": "PF08016", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08016" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Polycystin cation channel PKD1/PKD2", "eco_id": "ECO_0000259", "start_pos": 273, "end_pos": 497, "start_aa": "Arg", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 115, "end_pos": 117 }, { "start_pos": 138, "end_pos": 140 }, { "start_pos": 182, "end_pos": 184 }, { "start_pos": 390, "end_pos": 392 }, { "start_pos": 491, "end_pos": 493 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"uniprot_ac": "I3LFW4", "uniprot_id": "I3LFW4_PIG", "mass": { "chemical_mass": 24980.0, "monoisotopic_mass": 24980.0 }, "refseq": { "ac": "XP_005671975", "name": "methyltransferase-like protein 5 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671975" }, "gene_names": [ { "name": "METTL5", "type": "recommended", "evidence": [ { "id": "I3LFW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFW4" } ] }, { "name": "METTL5", "type": "synonym", "evidence": [ { "id": "XP_005671975", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671975" } ] } ], "protein_names": [ { "name": "Methyltransferase-like protein 5", "type": "recommended", "evidence": [ { "id": "I3LFW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFW4/entry#names_and_taxonomy" } ] }, { "name": "methyltransferase-like protein 5 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005671975", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671975" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFW4", "url": "https://www.uniprot.org/uniprotkb/I3LFW4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "METTL5", "url": "https://www.uniprot.org/uniprotkb/I3LFW4", "locus": { "chromosome": "15", "start_pos": 76092968, "end_pos": 76108351, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028458", "url": "https://www.ensembl.org/id/ENSSSCG00000028458" } ] } } ], "crossref": [ { "id": "ENSSSCG00000028458", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028458", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02440", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02440", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520407", "url": "https://www.ncbi.nlm.nih.gov/gene/100520407", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007848", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007848", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051720", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051720", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520407", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520407", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DVVYSIH", "url": "https://omabrowser.org/oma/group/DVVYSIH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LFW4", "url": "https://www.orthodb.org/?gene=I3LFW4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23290", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23290", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23290:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23290:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05175", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05175", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005671975", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671975", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QMY9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMY9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMY9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMY9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0P719", "url": "https://www.uniprot.org/uniprotkb/A0A8D0P719", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0P719-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0P719-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1ATU8", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ATU8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1ATU8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ATU8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFW4", "url": "https://www.uniprot.org/uniprotkb/I3LFW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFW4-1", "url": "https://www.uniprot.org/uniprotkb/I3LFW4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKKLRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKMVADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNVEEFELTNVDMVQCDVCSLSNKMSKSFDTVIMNPPFGTKNNKGTDIAFLKTALEMARTAVYSLHKSSTREHIQKKAAEWKIKIDIIAELRYDLPASYTFHKKKSVDIEVDLIRFSFLKPSDKSSLKSN", "length": 221, "header": "tr|I3LFW4-1|I3LFW4_PIG Isoform 1 of Methyltransferase-like protein 5 OS=Sus scrofa OX=9823 GN=METTL5 PE=3 SV=2 CANONICAL=I3LFW4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QMY9-1", "url": "https://www.uniprot.org/uniprotkb/I3LFW4/entry#A0A5G2QMY9-1", "sequence": { "sequence": "MKKLRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKMVADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNVEEFELTNVDMVQCDVCSLSNKMSKSFDTVIMNPPFGTKNNKELRYDLPASYTFHKKKSVDIEVDLIRFSFLKPSDKSSLKSN", "length": 176, "header": "tr|A0A5G2QMY9-1|A0A5G2QMY9_PIG Computationally mapped isoform of Methyltransferase-like protein 5 OS=Sus scrofa OX=9823 GN=METTL5 PE=3 SV=1 CANONICAL=I3LFW4-1" }, "locus": { "chromosome": "15", "start_pos": 76108034, "end_pos": 76097907, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084121.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084121.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066029.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066029.1" } ] } }, { "isoform_ac": "A0A8D0P719-1", "url": "https://www.uniprot.org/uniprotkb/I3LFW4/entry#A0A8D0P719-1", "sequence": { "sequence": "MKKLRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAGTDIAFLKTALEMARTAVYSLHKSSTREHIQKKAAEWKIKIDIIAELRYDLPASYTFHKKKSATIPARDQTGTVAASLHHNHTNAKSELHL", "length": 127, "header": "tr|A0A8D0P719-1|I3LFW4_PIG Computationally mapped isoform of Methyltransferase-like protein 5 OS=Sus scrofa OX=9823 GN=METTL5 PE=3 SV=1 CANONICAL=I3LFW4-1" }, "locus": { "chromosome": "15", "start_pos": 76108034, "end_pos": 76093554, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089948.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089948.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062237.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062237.1" } ] } }, { "isoform_ac": "A0A8D1ATU8-1", "url": "https://www.uniprot.org/uniprotkb/I3LFW4/entry#A0A8D1ATU8-1", "sequence": { "sequence": "MKKLRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKMVADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNVEEFELTNVDMVQCDVCSLSNKMSKSFDTVIMNPPFGTKNNKGTDIAFLKTALEMARTAVYSLHKSSTREHIQKKAAEWKIKIDIIAELRYDLPASYTFHKKKSATIPARDQTGTVAASLHHNHTNAKSELHL", "length": 226, "header": "tr|A0A8D1ATU8-1|I3LFW4_PIG Computationally mapped isoform of Methyltransferase-like protein 5 OS=Sus scrofa OX=9823 GN=METTL5 PE=3 SV=1 CANONICAL=I3LFW4-1" }, "locus": { "chromosome": "15", "start_pos": 76108034, "end_pos": 76093554, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078942.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078942.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068023.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068023.1" } ] } }, { "isoform_ac": "I3LFW4-1", "url": "https://www.uniprot.org/uniprotkb/I3LFW4/entry#I3LFW4-1", "sequence": { "sequence": "MKKLRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKMVADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNVEEFELTNVDMVQCDVCSLSNKMSKSFDTVIMNPPFGTKNNKGTDIAFLKTALEMARTAVYSLHKSSTREHIQKKAAEWKIKIDIIAELRYDLPASYTFHKKKSVDIEVDLIRFSFLKPSDKSSLKSN", "length": 221, "header": "tr|I3LFW4-1|I3LFW4_PIG Isoform 1 of Methyltransferase-like protein 5 OS=Sus scrofa OX=9823 GN=METTL5 PE=3 SV=2 CANONICAL=I3LFW4-1" }, "locus": { "chromosome": "15", "start_pos": 76108034, "end_pos": 76097907, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024942.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024942.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022957.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022957.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1ATU8", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ATU8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520407", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520407", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZVD3-1", "protein_name": "Methyltransferase-like protein 5", "gene_name": "METTL5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKKLKLKELESCLQQVDTFESPKVLLEQYPTRPHIAACMLYTIHNTFDDIENKTVADLGCGCGMLSIGSAMLGAGLCVGFDIDAEALEIFNSNLEDFELTNVDVVQCDVSSLPDSMSETFDTVIMNPPFGTKHNKGMDMIFLKTALQMAKTAVYSLHKTSTRQHVQKKADEWEVKMEVIAELRYDLPASYKFHKKKSVDIEVDFIRFSTRNS", "length": 212 }, "evidence": [ { "id": "I3LFW4", "url": "https://omabrowser.org/oma/group/I3LFW4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1QVR8-1", "protein_name": "rRNA N(6)-adenosine-methyltransferase METTL5", "gene_name": "mettl5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKLKELESCLQQVDGFEEPKILLEQYPTSPHIAGCMLYTIHNTFDDIQNKLVADLGCGCGVLSIGAAVLDAGLCVGFDIDEDALDIFRGNVEEFELPNIDVVQCDVCSIGSSYAKKFDTVIMNPPFGTKHNQGIDMQFLQTAISMATSAVYSLHKTSTRDHIQKKANDWKVKMEVIAELRYDLPASYKFHKKKSVDIQVDFIRFTPT", "length": 207 }, "evidence": [ { "id": "I3LFW4", "url": "https://omabrowser.org/oma/group/I3LFW4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3GU94-1", "protein_name": "Methyltransferase-like protein 5", "gene_name": "Mettl5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKKLRLKELESRLQEVDGFETPKLLLEQYPTRPHIAACMLYTIHNTYDDIKNKVVADLGCGCGVLSIGASMLGAGLCVGFDIDEDALEIFNRNVEEFELTNVDMIQCDVYTLSNRMSKLFDTVIMNPPFGTKNNKGTDMAFLKTALGMARTAVYSLHKSSTREHIQKKAAEWKVKIEIIAELRYDLPALYNFHKKKSVDIEVDLIRFSF", "length": 209 }, "evidence": [ { "id": "I3LFW4", "url": "https://omabrowser.org/oma/group/I3LFW4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8K1A0-1", "protein_name": "rRNA N(6)-adenosine-methyltransferase METTL5", "gene_name": "Mettl5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLKLKELESRLQEVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKAVADLGCGCGVLSIGAAMLGAGLCVGFDIDEDALEIFNKNVEEFELTNVDMIQCDVYSLSNRMSKLFDTVIMNPPFGTKNNKGTDMAFLKTALGMARTAVYSLHKSSTREHIQKKAAEWKVKIEIIAELRYDLPALYNFHKKKSVDIEVDLIRFSF", "length": 209 }, "evidence": [ { "id": "I3LFW4", "url": "https://omabrowser.org/oma/group/I3LFW4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MSW4-1", "protein_name": "rRNA N(6)-adenosine-methyltransferase Mettl5", "gene_name": "Mettl5", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MARLKLRKLEEYLQGVDGFEQPKILLEQYPTPPHIAACMAHHMQSQHEDIEGKLVGDLGCGCGMLSIASTLLGAQLTVGFELDGDAVDTFRGNVVEMELPNVDCVRADVLQLIGSKWEKSFDTVLMNPPFGTKHNAGMDMRFLEVALRLANRAVYSLHKTSTRSYIQKKALEWGARGSVVAELRYNIDASYKFHKQKSKDIEVDFWRFEIGTE", "length": 213 }, "evidence": [ { "id": "I3LFW4", "url": "https://omabrowser.org/oma/group/I3LFW4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9NRN9-1", "protein_name": "rRNA N(6)-adenosine-methyltransferase METTL5", "gene_name": "METTL5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKKVRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSNRMSKSFDTVIMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLHKSSTREHVQKKAAEWKIKIDIIAELRYDLPASYKFHKKKSVDIEVDLIRFSF", "length": 209 }, "evidence": [ { "id": "I3LFW4", "url": "https://omabrowser.org/oma/group/I3LFW4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "I3LFW4", "url": "https://www.uniprot.org/uniprotkb/I3LFW4" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "I3LFW4", "url": "https://www.uniprot.org/uniprotkb/I3LFW4" } ], "pmid": "" }, { "name": "S-adenosyl-L-methionine binding", "id": "GO:1904047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904047", "evidence": [ { "database": "UniProtKB", "id": "I3LFW4", "url": "https://www.uniprot.org/uniprotkb/I3LFW4" } ], "pmid": "" }, { "name": "rRNA (adenine-N6-)-methyltransferase activity", "id": "GO:0008988", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008988", "evidence": [ { "database": "UniProtKB", "id": "I3LFW4", "url": "https://www.uniprot.org/uniprotkb/I3LFW4" } ], "pmid": "" }, { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "I3LFW4", "url": "https://www.uniprot.org/uniprotkb/I3LFW4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 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"crossref": [ { "id": "I3LBW6", "url": "https://alphafold.ebi.ac.uk/entry/I3LBW6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023050", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023050", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01850", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01850", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR016491", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016491", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030379", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030379", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EAPILCK", "url": "https://omabrowser.org/oma/group/EAPILCK/", "database": "OMA", "categories": [ 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"PPLAPPPRHPLYQSHLATNTAYMSSSVSDNEQKKKENTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGESGIGKSTLIDTLFNTNFEDHESSHFYPHVRLKAQTYDLQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIQRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGQLPFAVVGSMDEVKVGNKMVKARQYPWGVVQVENENHCDFVKLREMLICTNMEDLRDQTHTRHYELYRRCRLEEMGFADMGPESKPRSLQETYEAKRHEFYGERQRKEEEMKQVFVQRVKEKEAVLKEAERELQAKFEHLKRVHQEEKMKLEEKRRLLEEEIIAFSKKKATSEIYQNQPYGAPGGNPRRDKDRKNSNFM", "length": 454, "header": "tr|I3LBW6-1|I3LBW6_PIG Isoform 1 of Septin OS=Sus scrofa OX=9823 GN=SEPTIN10 PE=1 SV=3 CANONICAL=I3LBW6-1" }, "isoforms": [ { "isoform_ac": "A0A481C468-1", "url": "https://www.uniprot.org/uniprotkb/I3LBW6/entry#A0A481C468-1", "sequence": { "sequence": 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"ENSSSCP00000069342.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069342.2" } ] } }, { "isoform_ac": "A0A8D0PFX7-1", "url": "https://www.uniprot.org/uniprotkb/I3LBW6/entry#A0A8D0PFX7-1", "sequence": { "sequence": "FYSEILYQSHLATNTAYMSSSVSDNEQKQKKENTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGESGIGKSTLIDTLFNTNFEDHESSHFYPHVRLKAQTYDLQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIQRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGQLPFAVVGSMDEVKVGNKMVKARQYPWGVVQVENENHCDFVKLREMLICTNMEDLRDQTHTRHYELYRRCRLEEMGFADMGPESKPRSLQETYEAKRHEFYGERQRKEEEMKQVFVQRVKEKEAVLKEAERELQAKFEHLKRVHQEEKMKLEEKRRLLEEEIIAFSKKKATSEIYQNQPYGAPGGNPRRDKDRKK", "length": 446, "header": "tr|A0A8D0PFX7-1|I3LBW6_PIG Computationally mapped isoform of Septin OS=Sus scrofa OX=9823 GN=SEPTIN10 PE=1 SV=1 CANONICAL=I3LBW6-1" }, "locus": { "chromosome": "3", "start_pos": 46523862, "end_pos": 46487061, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088494.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088494.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067596.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067596.1" } ] } }, { "isoform_ac": "I3LBW6-1", "url": "https://www.uniprot.org/uniprotkb/I3LBW6/entry#I3LBW6-1", "sequence": { "sequence": "PPLAPPPRHPLYQSHLATNTAYMSSSVSDNEQKKKENTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGESGIGKSTLIDTLFNTNFEDHESSHFYPHVRLKAQTYDLQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIQRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGQLPFAVVGSMDEVKVGNKMVKARQYPWGVVQVENENHCDFVKLREMLICTNMEDLRDQTHTRHYELYRRCRLEEMGFADMGPESKPRSLQETYEAKRHEFYGERQRKEEEMKQVFVQRVKEKEAVLKEAERELQAKFEHLKRVHQEEKMKLEEKRRLLEEEIIAFSKKKATSEIYQNQPYGAPGGNPRRDKDRKNSNFM", "length": 454, "header": "tr|I3LBW6-1|I3LBW6_PIG Isoform 1 of Septin OS=Sus scrofa OX=9823 GN=SEPTIN10 PE=1 SV=3 CANONICAL=I3LBW6-1" }, "locus": { "chromosome": "3", "start_pos": 46546767, "end_pos": 46485289, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029735.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029735.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021538.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021538.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr 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"https://www.reactome.org/PathwayBrowser/#R-SSC-9757110", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001231053", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231053", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "21032", "url": "https://www.rhea-db.org/rhea/21032", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B3K2", "url": "https://www.uniprot.org/uniprotkb/A0A287B3K2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3K2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3K2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1UCF0", "url": "https://www.uniprot.org/uniprotkb/A0A5K1UCF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1UCF0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1UCF0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FC10", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FC10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FC10-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FC10-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNI6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNI6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNI6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNI6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RUR0", "url": "https://www.uniprot.org/uniprotkb/F1RUR0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RUR0-1", "url": "https://www.uniprot.org/uniprotkb/F1RUR0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBU0", "url": "https://www.uniprot.org/uniprotkb/I3LBU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBU0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBU0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLKWLSLLLLLQLTCYFSSGRCGKVLVWPMEYSHWINMKIILEELVTRGHEVTVLKSSAAILVDPNKSPTIKFESFPASVSQEDYENFFQQLLTEWIQGAKHSFWTKITTAQNIFSELSDVSLKICKDAVLNKKLMTKLQESRFDVILADPIIPCAELVAEILNIPLVYSLRISPGYSIEKFSGKLPFPPSYVPVVMSEFNDHMTFTERVNNMLYVVFLDFWFQTFNEKKWNQFYSEALGRPTTIFETMGKADMWLIRNYWDFEFPRPLLPNFEFIGGFHCKPAKPLPKEMEEFVQSAGEHGIVLFTLGSMIRNMTEERANTIASAFAQIPQKVLWKYEGKKPDTLGPNTRLYKWIPQNDLLGHPQTKAFITHGGANGVYEAIYHGIPMVGLPLFGDQPDNIAHMTAKGAAVRLDLDTMSRTDLVNALKQVINNPFYKENVMRLSTIQHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVATAAFALTRGCLFCCRKLANARKKAKRQ", "length": 529, "header": "tr|I3LBU0-1|I3LBU0_PIG Isoform 1 of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN=UGT2B31 PE=1 SV=4 CANONICAL=I3LBU0-1" }, "isoforms": [ { "isoform_ac": "A0A287B3K2-1", "url": "https://www.uniprot.org/uniprotkb/I3LBU0/entry#A0A287B3K2-1", "sequence": { "sequence": "NMSLKWLSLLLLLQLTCYFSSGRCGKVLVWPMEYSHWINMKIILEELVTRGHEVTVLKSSAAILVDPNKSPTIKFESFPASVSQEDYENFFQQLLTEWIQGAKHSFWTKITTAQNIFSELSDVSLKICKDAVLNKKLMTKLQESRFDVILADPIIPCAELVAEILNIPLVYSLRISPGYSIEKFSGKLPFPPSYVPVVMSEFNDHMTFTERVNNMLYVVFLDFWFQTFNEKKWNQFYSEALGRPTTIFETMGKADMWLIRNYWDFEFPRPLLPNFEFIGGFHCKPVLWKYEGKKPDTLGPNTRLYKWIPQNDLLGHPQTKAFITHGGANGVYEAIYHGIPMVGLPLFGDQPDNIAHMTAKGAAVRLDLDTMSRTDLVNALKQVINNPFYKENVMRLSTIQHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVATAAFALTRGCLFCCRKLANARKKAKRQ", "length": 480, "header": "tr|A0A287B3K2-1|A0A287B3K2_PIG Computationally mapped isoform of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN=UGT2B31 PE=1 SV=2 CANONICAL=I3LBU0-1" }, "locus": { "chromosome": "8", "start_pos": 66324051, "end_pos": 66311580, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058733.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058733.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050703.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050703.2" } ] } }, { "isoform_ac": "A0A5K1UCF0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBU0/entry#A0A5K1UCF0-1", "sequence": { "sequence": "VDKMSLKWLSLLLLLQLTCYFSSGRCGKVLVWPMEYSHWINMKIILEELVTRGHEVTVLKSSAAILVDPNKSPTIKFESFPASVSQEDYENFFQQLLTEWIQGAKHSFWTKITTAQNIFSELSDVSLKICKDAVLNKKLMTKLQESRFDVILADPIIPCAELVAEILNIPLVYSLRISPGYSIEKFSGKLPFPPSYVPVVMSEFNDHMTFTERVNNMLYVVFLDFWFQTFNEKKWNQFYSEALGKSCFLFVSHEDLTPGISLLQEMEEFVQSAGEHGIVLFTLGSMIRNMTEERANTIASAFAQIPQKVLWKYEGKKPDTLGPNTRLYKWIPQNDLLGHPQTKAFITHGGANGVYEAIYHGIPMVGLPLFGDQPDNIAHMTAKGAAVRLDLDTMSRTDLVNALKQVINNPFYKENVMRLSTIQHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVATAAFALTRGCLFCCRKLANARKKAKRQ", "length": 503, "header": "tr|A0A5K1UCF0-1|A0A5K1UCF0_PIG Computationally mapped isoform of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN=UGT2B31 PE=1 SV=1 CANONICAL=I3LBU0-1" }, "locus": { "chromosome": "8", "start_pos": 66323735, "end_pos": 66311580, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026797.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026797.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026558.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026558.3" } ] } }, { "isoform_ac": "A0A8W4FC10-1", "url": "https://www.uniprot.org/uniprotkb/I3LBU0/entry#A0A8W4FC10-1", "sequence": { "sequence": "MSLKWLSLLLLLQLTCYFSSGRCGKVLVWPMEYSHWINMKIILEELVTRGHEVTVLKSSAAILVDPNKSPTIKFESFPASVSQEDYENFFQQLLTEWIQGAKHSFWTKITTAQNIFSELSDVSLKICKDAVLNKKLMTKLQESRFDVILADPIIPCAELVAEILNIPLVYSLRISPGYSIEKFSGKLPFPPSYVPVVMSEFNDHMTFTERVNNMLYVVFLDFWFQTFNEKKWNQFYSEALGRPTTIFETMGKADMWLIRNYWDFEFPRPLLPNFEFIGGFHCKPQILLLQEMEEFVQSAGEHGIVLFTLGSMIRNMTEERANTIASAFAQIPQKVLWKYEGKKPDTLGPNTRLYKWIPQNDLLGHPQTKAFITHGGANGVYEAIYHGIPMVGLPLFGDQPDNIAHMTAKGAAVRLDLDTMSRTDLVNALKQVINNPFYKENVMRLSTIQHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVATAAFALTRGCLFCCRKLANARKKAKRQ", "length": 529, "header": "tr|A0A8W4FC10-1|I3LBU0_PIG Computationally mapped isoform of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN=UGT2B31 PE=1 SV=1 CANONICAL=I3LBU0-1" }, "locus": { "chromosome": "8", "start_pos": 66323726, "end_pos": 66311580, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098620.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098620.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075827.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075827.1" } ] } }, { "isoform_ac": "A0A8W4FNI6-1", "url": "https://www.uniprot.org/uniprotkb/I3LBU0/entry#A0A8W4FNI6-1", "sequence": { "sequence": "MSLKWLSLLLLLQLTCYFSSGRCGKVLVWPMEYSHWINMKIILEELVTRGHEVTVLKSSAAILVDPNKSPTIKFESFPASVSQEDYENFFQQLLTEWIQGAKHSFWTKITTAQNIFSELSDVSLKICKDAVLNKKLMTKLQESRFDVILADPIIPCAELVAEILNIPLVYSLRISPGYSIEKFSGKLPFPPSYVPVVMSEFNDHMTFTERVNNMLYVVFLDFWFQTFNEKKWNQFYSEALGRPTTIFETMGKADMWLIRNYWDFEFPRPLLPNFEFIGGFHCKPAKPLPKEMEEFVQSAGEHGIVLFTLGSMIRNMTEERANTIASAFAQIPQKLQ", "length": 336, "header": "tr|A0A8W4FNI6-1|A0A8W4FNI6_PIG Computationally mapped isoform of glucuronosyltransferase OS=Sus scrofa OX=9823 GN=UGT2B31 PE=1 SV=1 CANONICAL=I3LBU0-1" }, "locus": { "chromosome": "8", "start_pos": 66323726, "end_pos": 66311851, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101534.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101534.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079860.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079860.1" } ] } }, { "isoform_ac": "F1RUR0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBU0/entry#F1RUR0-1", "sequence": { "sequence": "KMSLKWLSLLLLLQLTCYFSSGRCGKVLVWPMEYSHWINMKIILEELVTRGHEVTVLKSSAAILVDPNKSPTIKFESFPASVSQEDYENFFQQLLTEWIQGAKHSFWTKITTAQNIFSELSDVSLKICKDAVLNKKLMTKLQESRFDVILADPIIPCAELVAEILNIPLVYSLRISPGYSIEKFSGKLPFPPSYVPVVMSEFNDHMTFTERVNNMLYVVFLDFWFQTFNEKKWNQFYSEALGRPTTIFETMGKADMWLIRNYWDFEFPRPLLPNFEFIGGFHCKPVLWKYEGKKPDTLGPNTRLYKWIPQNDLLGHPQTKAFITHGGANGVYEAIYHGIPMVGLPLFGDQPDNIAHMTAKGAAVRLDLDTMSRTDLVNALKQVINNPFYKENVMRLSTIQHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVATAAFALTRGCLFCCRKLANARKKAKRQ", "length": 480, "header": "tr|F1RUR0-1|F1RUR0_PIG Computationally mapped isoform of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN=UGT2B31 PE=1 SV=5 CANONICAL=I3LBU0-1" }, "locus": { "chromosome": "8", "start_pos": 66323729, "end_pos": 66311580, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009783.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009783.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009530.5", "url": "https://www.ensembl.org/id/ENSSSCP00000009530.5" } ] } }, { "isoform_ac": "I3LBU0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBU0/entry#I3LBU0-1", "sequence": { "sequence": "MSLKWLSLLLLLQLTCYFSSGRCGKVLVWPMEYSHWINMKIILEELVTRGHEVTVLKSSAAILVDPNKSPTIKFESFPASVSQEDYENFFQQLLTEWIQGAKHSFWTKITTAQNIFSELSDVSLKICKDAVLNKKLMTKLQESRFDVILADPIIPCAELVAEILNIPLVYSLRISPGYSIEKFSGKLPFPPSYVPVVMSEFNDHMTFTERVNNMLYVVFLDFWFQTFNEKKWNQFYSEALGRPTTIFETMGKADMWLIRNYWDFEFPRPLLPNFEFIGGFHCKPAKPLPKEMEEFVQSAGEHGIVLFTLGSMIRNMTEERANTIASAFAQIPQKVLWKYEGKKPDTLGPNTRLYKWIPQNDLLGHPQTKAFITHGGANGVYEAIYHGIPMVGLPLFGDQPDNIAHMTAKGAAVRLDLDTMSRTDLVNALKQVINNPFYKENVMRLSTIQHDQPVKPLDRAVFWIEFVMRHKGAKHLRPAAHDLTWYQYHSLDVIGFLLACVATAAFALTRGCLFCCRKLANARKKAKRQ", "length": 529, "header": "tr|I3LBU0-1|I3LBU0_PIG Isoform 1 of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN=UGT2B31 PE=1 SV=4 CANONICAL=I3LBU0-1" }, "locus": { "chromosome": "8", "start_pos": 66323726, "end_pos": 66311580, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022966.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022966.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021512.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021512.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FC10", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FC10" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514063", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514063", "resource": "KEGG Pathway" }, { "id": "R-SSC-9753281", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9753281", "resource": "Reactome", "description": "Paracetamol ADME" }, { "id": "R-SSC-9757110", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9757110", "resource": "Reactome", "description": "Prednisone ADME" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LBU0", "url": "https://www.uniprot.org/uniprotkb/I3LBU0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "glucuronosyltransferase activity", "id": "GO:0015020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015020", "evidence": [ { "database": "UniProtKB", "id": "I3LBU0", "url": "https://www.uniprot.org/uniprotkb/I3LBU0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 315, "end_pos": 317, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21032", "name": "", "equation": "glucuronate acceptor + UDP-alpha-D-glucuronate = acceptor beta-D-glucuronoside + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21032", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21032" } ] }, { "id": "R-SSC-158546", "name": "UGTs glucuronate APAP to APAP-GlcA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [ "R-ALL-158604" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-158546", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-158546" } ] }, { "id": "R-SSC-9758661", "name": "UGT2B7,2B17,1A3 glucuronidates PRED metabolites", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9758661", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9758661" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-158604", "participant_name": "APAP-GlcA [endoplasmic reticulum lumen]", "crossref": [ { "id": "ZINC000005197198", "database": "ZINC", "url": "" }, { "id": "132962", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 315, "end_pos": 317 }, { "start_pos": 67, "end_pos": 69 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LE99-1", "uniprot_ac": "I3LE99", "uniprot_id": "I3LE99_PIG", "mass": { "chemical_mass": 56289.0, "monoisotopic_mass": 56289.0 }, "refseq": {}, "gene_names": [ { "name": "AP1M2", "type": "recommended", "evidence": [ { "id": "I3LE99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ] } ], "protein_names": [ { "name": "AP-1 complex subunit mu-2", "type": "recommended", "evidence": [ { "id": "I3LE99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE99/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99#function" }, { "database": "UniProtKB", "id": "PIRNR005992", "url": "https://www.uniprot.org/uniprotkb/PIRNR005992#function" }, { "database": "UniProtKB", "id": "ARBA00057121", "url": "https://www.uniprot.org/uniprotkb/ARBA00057121#function" }, { "database": "UniProtKB", "id": "A0A8W4FDA5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDA5#function" }, { "database": "UniProtKB", "id": "A0A8W4FF51", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF51#function" }, { "database": "UniProtKB", "id": "A0A5G2QR92", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR92#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AP1M2", "url": "https://www.uniprot.org/uniprotkb/I3LE99", "locus": { "chromosome": "2", "start_pos": 69341283, "end_pos": 69354013, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025838", "url": "https://www.ensembl.org/id/ENSSSCG00000025838" } ] } } ], "crossref": [ { "id": "ENSSSCG00000025838", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025838", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09259", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09259", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14835", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14835", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001392", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001392", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011012", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011012", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018240", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018240", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028565", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028565", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036168", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036168", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050431", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050431", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HSRLEIM", "url": "https://omabrowser.org/oma/group/HSRLEIM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10529", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10529", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00928", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00928", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01217", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01217", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2132295", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2132295", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-432720", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-432720", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-432722", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-432722", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QR92", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR92-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR92-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDA5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDA5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDA5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDA5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF51", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF51-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF51-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE99-1", "url": "https://www.uniprot.org/uniprotkb/I3LE99-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQRESEAGQLSQPKLRPRSVFSSADSAAHLETSPLRRAHLGPHLRAGASAGRRKRRHCRLLEFPSHLPSPPAATMSASAVFILDVKGKPLISRNYKGDVAMSEIEHFMPLLMQREEEGALAPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKTVEVFSEYFKELEEESIRDNFVIIYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANSVEISVPVPSDADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTS", "length": 497, "header": "tr|I3LE99-1|I3LE99_PIG Isoform 1 of AP-1 complex subunit mu-2 OS=Sus scrofa OX=9823 GN=AP1M2 PE=1 SV=2 CANONICAL=I3LE99-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QR92-1", "url": "https://www.uniprot.org/uniprotkb/I3LE99/entry#A0A5G2QR92-1", "sequence": { "sequence": "MSEIEHFMPLLMQREEEGALAPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKTVEVFSEYFKELEEESIRDNFVIIYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANSVEISVPVPSDADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGGKLWLRSQLWLRPDP", "length": 405, "header": "tr|A0A5G2QR92-1|A0A5G2QR92_PIG Computationally mapped isoform of AP-1 complex subunit mu-2 OS=Sus scrofa OX=9823 GN=AP1M2 PE=1 SV=1 CANONICAL=I3LE99-1" }, "locus": { "chromosome": "2", "start_pos": 69352010, "end_pos": 69342296, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077225.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077225.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067437.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067437.1" } ] } }, { "isoform_ac": "A0A8W4FDA5-1", "url": "https://www.uniprot.org/uniprotkb/I3LE99/entry#A0A8W4FDA5-1", "sequence": { "sequence": "TGATAVTTPLISRNYKGDVAMSEIEHFMPLLMQREEEGALAPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKTVEVFSEYFKELEEESIRDNFVIIYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGGKLWLRSQLWLRPDP", "length": 372, "header": "tr|A0A8W4FDA5-1|I3LE99_PIG Computationally mapped isoform of AP-1 complex subunit mu-2 OS=Sus scrofa OX=9823 GN=AP1M2 PE=1 SV=1 CANONICAL=I3LE99-1" }, "locus": { "chromosome": "2", "start_pos": 69352995, "end_pos": 69342296, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103807.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103807.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077303.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077303.1" } ] } }, { "isoform_ac": "A0A8W4FF51-1", "url": "https://www.uniprot.org/uniprotkb/I3LE99/entry#A0A8W4FF51-1", "sequence": { "sequence": "MSEIEHFMPLLMQREEEGALAPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKTVEVFSEYFKELEEESIRDNFVIIYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANSVEISVPVPSDADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGGKLHLRPTPQLMAMPDP", "length": 407, "header": "tr|A0A8W4FF51-1|I3LE99_PIG Computationally mapped isoform of AP-1 complex subunit mu-2 OS=Sus scrofa OX=9823 GN=AP1M2 PE=1 SV=1 CANONICAL=I3LE99-1" }, "locus": { "chromosome": "2", "start_pos": 69352010, "end_pos": 69342912, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094015.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094015.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076941.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076941.1" } ] } }, { "isoform_ac": "I3LE99-1", "url": "https://www.uniprot.org/uniprotkb/I3LE99/entry#I3LE99-1", "sequence": { "sequence": "MQRESEAGQLSQPKLRPRSVFSSADSAAHLETSPLRRAHLGPHLRAGASAGRRKRRHCRLLEFPSHLPSPPAATMSASAVFILDVKGKPLISRNYKGDVAMSEIEHFMPLLMQREEEGALAPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKTVEVFSEYFKELEEESIRDNFVIIYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANSVEISVPVPSDADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTS", "length": 497, "header": "tr|I3LE99-1|I3LE99_PIG Isoform 1 of AP-1 complex subunit mu-2 OS=Sus scrofa OX=9823 GN=AP1M2 PE=1 SV=2 CANONICAL=I3LE99-1" }, "locus": { "chromosome": "2", "start_pos": 69354013, "end_pos": 69341693, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031515.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031515.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022386.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022386.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FDA5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDA5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2132295", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2132295", "resource": "Reactome", "description": "MHC class II antigen presentation" }, { "id": "R-SSC-432720", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-432720", "resource": "Reactome", "description": "Lysosome Vesicle Biogenesis" }, { "id": "R-SSC-432722", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-432722", "resource": "Reactome", "description": "Golgi Associated Vesicle Biogenesis" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZRP6-1", "protein_name": "AP-1 complex subunit mu-2", "gene_name": "Ap1m2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSASAVFILDVKGKPLISRNYKGDVPMTEIDHFMPLLMQREEEGMLAPLLSHGRVHFLWIKHSNLYLVATTLKNANASLVYSFLYKTVEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVRPRVDXESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVETEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTS", "length": 423 }, "evidence": [ { "id": "I3LE99", "url": "https://omabrowser.org/oma/group/I3LE99/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3SYW1-1", "protein_name": "AP-1 complex subunit mu-2", "gene_name": "AP1M2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSASAVFILDVKGKPLISRNYKGDVAMSEIDHFMPLLMQREEEGALTPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKIVEVFSEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGSIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPEKNTVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTS", "length": 423 }, "evidence": [ { "id": "I3LE99", "url": "https://omabrowser.org/oma/group/I3LE99/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9WVP1-1", "protein_name": "AP-1 complex subunit mu-2", "gene_name": "Ap1m2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSASAVFILDVKGKPLISRNYKGDVPMTEIDHFMPLLMQREEEGVLAPLLSHGRVHFLWIKHSNLYLVATTLKNANASLVYSFLYKTVEVFCEYFKELEEESIRDNFVIVYDLLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVETEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTS", "length": 423 }, "evidence": [ { "id": "I3LE99", "url": "https://omabrowser.org/oma/group/I3LE99/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y6Q5-1", "protein_name": "AP-1 complex subunit mu-2", "gene_name": "AP1M2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0030665", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" }, { "name": "clathrin adaptor complex", "id": "GO:0030131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030131", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" }, { "name": "AP-1 adaptor complex", "id": "GO:0030121", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030121", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" }, { "name": "Golgi to vacuole transport", "id": "GO:0006896", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006896", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "clathrin adaptor activity", "id": "GO:0035615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035615", "evidence": [ { "database": "UniProtKB", "id": "I3LE99", "url": "https://www.uniprot.org/uniprotkb/I3LE99" } ], "pmid": "" } ] } ] }, 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"Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 150, "end_pos": 152 }, { "start_pos": 260, "end_pos": 262 }, { "start_pos": 302, "end_pos": 304 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LKK9-1", "uniprot_ac": "I3LKK9", "uniprot_id": "I3LKK9_PIG", "mass": { "chemical_mass": 37339.0, "monoisotopic_mass": 37339.0 }, "refseq": {}, "gene_names": [ { "name": "LOC110260595", "type": "recommended", "evidence": [ { "id": "I3LKK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKK9" } ] } ], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "I3LKK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKK9/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEW4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEW4#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" }, { "database": "UniProtKB", "id": "I3LKK9", "url": "https://www.uniprot.org/uniprotkb/I3LKK9#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LKK9", "url": "https://www.uniprot.org/uniprotkb/I3LKK9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC110260595", "url": "https://www.uniprot.org/uniprotkb/I3LKK9", "locus": {} } ], "crossref": [ { "id": "I3LKK9", "url": "https://alphafold.ebi.ac.uk/entry/I3LKK9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000039436", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000039436", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR26452", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26452", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48001", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48001", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FEW4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEW4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEW4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKK9", "url": "https://www.uniprot.org/uniprotkb/I3LKK9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKK9-1", "url": "https://www.uniprot.org/uniprotkb/I3LKK9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFCAGSLLKLETHLSLLFSSSPSQRKLECSMEGGNTTTVTEFVLLGLSNNPHIQAVLFVTFLVAYLLILTENLLMLLVISTDSHLHSPMYFFLSHLSFLDAFYSSIIVPKLLEHLLSKWKTVSLLECFTQISLVIFSGATETCLLSVMAYDRFQAVCHPLLYAVAMNRKVCTGLVGASWAIGMGTGLVNTILLAQHHFCGPNLVRSFACELPPVLLLACSDPSVSIASILTTMVILGLVTLVLLLGSYTRIIMTALRINSATGRSKIFSTCSSHFLVVTIFYASGLSRYMTPASGSVLEQVLSVQYSVVTPLLNPLIYSLKNQEVKAALRRMLTKKPRLSS", "length": 341, "header": "tr|I3LKK9-1|I3LKK9_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC110260595 PE=3 SV=3 CANONICAL=I3LKK9-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FEW4-1", "url": "https://www.uniprot.org/uniprotkb/I3LKK9/entry#A0A8W4FEW4-1", "sequence": { "sequence": "MFCAGSLLKLETHLSLLFSSSPSQRKLECSMEGGNTTTVTEFAVLFVTFLVAYLLILTENLLMLLVISTDSHLHSPMYFFLSHLSFLDAFYSSIIVPKLLEHLLSKWKTVSLLECFTQISLVIFSGATETCLLSVMAYDRFQAVCHPLLYAVAMNRKVCTGLVGASWAIGMGTGLVNTILLAQHHFCGPNLVRSFACELPPVLLLACSDPSVSIASILTTMVILGLVTLVLLLGSYTRIIMTALRINSATGRSKIFSTCSSHFLVVTIFYASGLSRYMTPASGSVLEQVLSVQYSVVTPLLNPLIYSLKNQEVKAALRRMLTKKPRLSS", "length": 329, "header": "tr|A0A8W4FEW4-1|I3LKK9_PIG Computationally mapped isoform of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC110260595 PE=3 SV=1 CANONICAL=I3LKK9-1" }, "locus": { "chromosome": "5", "start_pos": 79197835, "end_pos": 79194741, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093174.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093174.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077852.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077852.1" } ] } }, { "isoform_ac": "I3LKK9-1", "url": "https://www.uniprot.org/uniprotkb/I3LKK9/entry#I3LKK9-1", "sequence": { "sequence": "MFCAGSLLKLETHLSLLFSSSPSQRKLECSMEGGNTTTVTEFVLLGLSNNPHIQAVLFVTFLVAYLLILTENLLMLLVISTDSHLHSPMYFFLSHLSFLDAFYSSIIVPKLLEHLLSKWKTVSLLECFTQISLVIFSGATETCLLSVMAYDRFQAVCHPLLYAVAMNRKVCTGLVGASWAIGMGTGLVNTILLAQHHFCGPNLVRSFACELPPVLLLACSDPSVSIASILTTMVILGLVTLVLLLGSYTRIIMTALRINSATGRSKIFSTCSSHFLVVTIFYASGLSRYMTPASGSVLEQVLSVQYSVVTPLLNPLIYSLKNQEVKAALRRMLTKKPRLSS", "length": 341, "header": "tr|I3LKK9-1|I3LKK9_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=LOC110260595 PE=3 SV=3 CANONICAL=I3LKK9-1" }, "locus": { "chromosome": "5", "start_pos": 79197835, "end_pos": 79194741, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023005.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023005.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024623.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024623.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 291, "start_aa": "Thr", "end_pos": 291, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr291", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FEW4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEW4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "I3LKK9", "url": "https://www.uniprot.org/uniprotkb/I3LKK9" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { "database": "UniProtKB", "id": "I3LKK9", "url": "https://www.uniprot.org/uniprotkb/I3LKK9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LKK9", "url": "https://www.uniprot.org/uniprotkb/I3LKK9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LKK9", "url": "https://www.uniprot.org/uniprotkb/I3LKK9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 35, "end_pos": 37, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LKK9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 341, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LKK9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LKK9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LKK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKK9" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 71, "end_pos": 318, "start_aa": "Glu", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 291 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 35, "end_pos": 37 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF03952", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-70171", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70171", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-70263", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70263", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "10164", "url": "https://www.rhea-db.org/rhea/10164", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287ANH6", "url": "https://www.uniprot.org/uniprotkb/A0A287ANH6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANH6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANH6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVF3", "url": "https://www.uniprot.org/uniprotkb/A0A287AVF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVF3-1", "url": 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"MSVRRRVVRSQVALRPSNIALLQPSPPHPTPSVPTPIGPPPPSVPHPRSYVRLRRLLLTHRGLRVTCARPALLAPPPVRPPPAAREPQPPPPLPLSLCHHRRRRQRHHIPAIMSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINTTIAPALVSSGLSVVEQEKLDNLMLDLDGTENKSKFGANAILGVSLAVCKAGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVSEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNPSVL", "length": 546, "header": "tr|I3LCN1-1|I3LCN1_PIG Isoform 1 of phosphopyruvate hydratase OS=Sus scrofa OX=9823 GN=ENO2 PE=1 SV=3 CANONICAL=I3LCN1-1" }, "isoforms": [ { "isoform_ac": "A0A287ANH6-1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1/entry#A0A287ANH6-1", "sequence": { "sequence": "MSVRRRVVRSQVALRPSNIALLQPSPPHPTPSVPTPIGPPPPSVPHPRSYVRLRRLLLTHRGLRVTCARPALLAPPPVRPPPAAREPQPPPPLPLSLCHHRRRRQRHHIPAIMSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKAKFGANAILGVSLAVCKAGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVSEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNPSVL", "length": 503, "header": "tr|A0A287ANH6-1|A0A287ANH6_PIG Computationally mapped isoform of phosphopyruvate hydratase OS=Sus scrofa OX=9823 GN=ENO2 PE=1 SV=3 CANONICAL=I3LCN1-1" }, "locus": { "chromosome": "5", "start_pos": 63809211, "end_pos": 63800735, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044019.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044019.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045455.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045455.3" } ] } }, { "isoform_ac": "A0A287AVF3-1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1/entry#A0A287AVF3-1", "sequence": { "sequence": "MSVRRRVVRSQVALRPSNIALLQPSPPHPTPSVPTPIGPPPPSVPHPRSYVRLRRLLLTHRGLRVTCARPALLAPPPVRPPPAAREPQPPPPLPLSLCHHRRRRQRHHIPAIMSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINTTIAPALVSSVSAFLCHLPAKFGANAILGVSLAVCKAGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVSEAIQACKLAQENGWGVMVSHRSGETEDTFIADLFVGVRGISRTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNPSVL", "length": 531, "header": "tr|A0A287AVF3-1|A0A287AVF3_PIG Computationally mapped isoform of phosphopyruvate hydratase OS=Sus scrofa OX=9823 GN=ENO2 PE=1 SV=3 CANONICAL=I3LCN1-1" }, "locus": { "chromosome": "5", "start_pos": 63809211, "end_pos": 63800735, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044858.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044858.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048107.3", "url": "https://www.ensembl.org/id/ENSSSCP00000048107.3" } ] } }, { "isoform_ac": "A0A8W4FGH1-1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1/entry#A0A8W4FGH1-1", "sequence": { "sequence": "MSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINTTIAPALVSSGLSVVEQEKLDNLMLDLDGTENKSLELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVSEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNPSVL", "length": 315, "header": "tr|A0A8W4FGH1-1|I3LCN1_PIG Computationally mapped isoform of phosphopyruvate hydratase OS=Sus scrofa OX=9823 GN=ENO2 PE=1 SV=1 CANONICAL=I3LCN1-1" }, "locus": { "chromosome": "5", "start_pos": 63807693, "end_pos": 63800735, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103982.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103982.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078531.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078531.1" } ] } }, { "isoform_ac": "A0A8W4FPR9-1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1/entry#A0A8W4FPR9-1", "sequence": { "sequence": "LFTLPIMSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINTTIAPALVSSGLSVVEQEKLDNLMLDLDGTENKSKFGANAILGVSLAVCKAGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVSEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGSRLVPRAVLNVWLSTTSS", "length": 411, "header": "tr|A0A8W4FPR9-1|I3LCN1_PIG Computationally mapped isoform of phosphopyruvate hydratase OS=Sus scrofa OX=9823 GN=ENO2 PE=1 SV=1 CANONICAL=I3LCN1-1" }, "locus": { "chromosome": "5", "start_pos": 63808534, "end_pos": 63801360, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092590.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092590.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080315.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080315.1" } ] } }, { "isoform_ac": "I3LCN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1/entry#I3LCN1-1", "sequence": { "sequence": "MSVRRRVVRSQVALRPSNIALLQPSPPHPTPSVPTPIGPPPPSVPHPRSYVRLRRLLLTHRGLRVTCARPALLAPPPVRPPPAAREPQPPPPLPLSLCHHRRRRQRHHIPAIMSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINTTIAPALVSSGLSVVEQEKLDNLMLDLDGTENKSKFGANAILGVSLAVCKAGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVSEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNPSVL", "length": 546, "header": "tr|I3LCN1-1|I3LCN1_PIG Isoform 1 of phosphopyruvate hydratase OS=Sus scrofa OX=9823 GN=ENO2 PE=1 SV=3 CANONICAL=I3LCN1-1" }, "locus": { "chromosome": "5", "start_pos": 63809211, "end_pos": 63800735, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025086.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025086.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021806.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021806.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 30, "start_aa": "Thr", "end_pos": 30, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr30", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FGH1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGH1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-70171", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70171", "resource": "Reactome", "description": "Glycolysis" }, { "id": "R-SSC-70263", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70263", "resource": "Reactome", "description": "Gluconeogenesis" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "I3LCN1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1" } ], "pmid": "" }, { "name": "phosphopyruvate hydratase activity", "id": "GO:0004634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004634", "evidence": [ { "database": "UniProtKB", "id": "I3LCN1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "glycolytic process", "id": "GO:0006096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006096", "evidence": [ { "database": "UniProtKB", "id": "I3LCN1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "phosphopyruvate hydratase complex", "id": "GO:0000015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000015", "evidence": [ { "database": "UniProtKB", "id": "I3LCN1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LCN1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1" } ], "pmid": "" }, { "name": "perikaryon", "id": "GO:0043204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043204", "evidence": [ { "database": "UniProtKB", "id": "I3LCN1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1" } ], "pmid": "" }, { "name": "photoreceptor inner segment", "id": "GO:0001917", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001917", "evidence": [ { "database": "UniProtKB", "id": "I3LCN1", "url": "https://www.uniprot.org/uniprotkb/I3LCN1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 182, "end_pos": 184, "annotation": "n_glycosylation_sequon" }, { "start_pos": 214, "end_pos": 216, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "10164", "name": "", "equation": "(2R)-2-phosphoglycerate = phosphoenolpyruvate + H2O", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "10164", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/10164" } ] }, { "id": "R-SSC-70494", "name": "Enolase dimers (ENO1,2,3) convert PEP to 2PG", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-70494", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-70494" } ] }, { "id": "R-SSC-71660", "name": "Enolase dimers dehydrates 2PG", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-30485" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-71660", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-71660" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-30485", "participant_name": "2PG [cytosol]", "crossref": [ { "id": "58289", "database": "ChEBI", "url": "" }, { "id": "ZINC000003869232", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LCN1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 546, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LCN1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LCN1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LCN1", 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Classification" ] }, { "id": "IPR047355", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047355", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050548", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050548", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621009", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621009", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LKMTSEW", "url": "https://omabrowser.org/oma/group/LKMTSEW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LJF5", "url": "https://www.orthodb.org/?gene=I3LJF5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12247", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12247", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12247:SF62", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12247:SF62", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02820", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02820", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12140", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12140", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020920665", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920665", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FGU9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FH59", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH59", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FH59-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FH59-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LJF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METSVSVSSTQDPSSSPLEKHPSSADRNGDLDSEGGSGLEEAGFNWGEYLEETGASAAPHTSFKHVEISIQSNFQPGMKLEVANKKNPDTYWVATVITTCGQLLLLRYCGYGEDRRADFWCDVVIADLHPVGWCTQNNKTLMPPDAIKEKYTDWTEFLIRDLTGSRTAPASLLEGPLRGKGPLDLITVGSLLELQDSQNPFQYWIVSVIDNVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKTDSEWRCSLEKSLIDAAKCPLPMEVFKDHADLRSHFFTVGMKLEAVNMSEPSHVCPASVTKVFNSHFFQVTIDDLRPEPSKLSMLCHADSLGILPVQWCLKNGVSLTPPKGYSGQDFDWADYHKQRGTEEAPPFCFRNTSFSRGFTKNMKLEAVNPRNPGEVCVASVVCVKGRLMWLHLEGLQSPAPEFIVDVESMDIFPVGWCEANSYPLTTPHKTVSQKKRKIAVVQPEKQPPPAVPAERTSHGLCFFPHLDAAGPASAAPANGKYCCPQLFINHRCFSGPYLNKGRIAELPQSVGPGKCVLVLKEVLSLIINAAYKPGRVLRELQLVEDPRWNFQEETLKAKYRGKTYRAVAKIVRTSDQVADFCRRVCAKLECCPNLFSPVLVSENCPENCSIHTKTKYTYYYGKRKKIVKPPIGESTVESGHPKPARRRKRRKSIFVQKKRRSSTVDFVAGSGEESEEEDADAMDDDTGSEETGSELRDDQTDTSSAEVPPARPRRAVTLRSGSEPERHVPVERTRRGRRAQAAPGTEGAPGGPTASQEAAEETKQEEEERLVLESNPLEWTVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAVKLCHQIERVRVAFYAQYAN", "length": 899, "header": "tr|I3LJF5-1|I3LJF5_PIG Isoform 1 of Scm like with four mbt domains 2 OS=Sus scrofa OX=9823 GN=SFMBT2 PE=4 SV=2 CANONICAL=I3LJF5-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FGU9-1", "url": "https://www.uniprot.org/uniprotkb/I3LJF5/entry#A0A8W4FGU9-1", "sequence": { "sequence": "METSVSVSSTQDPSSSPLEKHPSSADRNGDLDSEGGSGLEEAGFNWGEYLEETGASAAPHTSFKHVEISIQSNFQPGMKLEVANKKNPDTYWVATVITTCGQLLLLRYCGYGEDRRADFWCDVVIADLHPVGWCTQNNKTLMPPDEIYPLKTDSEWRCSLEKSLIDAAKCPLPMEVFKDHADLRSHFFTVGMKLEAVNMSEPSHVCPASVTKVFNSHFFQVTIDDLRPEPSKLSMLCHADSLGILPVQWCLKNGVSLTPPKGYSGQDFDWADYHKQRGTEEAPPFCFRNTSFSRGFTKNMKLEAVNPRNPGEVCVASVVCVKGRLMWLHLEGLQSPAPEFIVDVESMDIFPVGWCEANSYPLTTPHKTVSQKKRKIAVVQPEKQPPPAVPAERTSHGLCFFPHLDAAGPASAAPANGKYCCPQLFINHRCFSGPYLNKGRIAELPQSVGPGKCVLVLKEVLSLIINAAYKPGRVLRELQLVEDPRWNFQEETLKAKYRGKTYRAVAKIVRTSDQVADFCRRVCAKLECCPNLFSPVLVSENCPENCSIHTKTKYTYYYGKRKKIVKPPIGESTVESGHPKPARRRKRRKSIFVQKKRRSSTVDFVAGSGEESEEEDADAMDDDTGSEETGSELRDDQTDTSSAEVPPARPRRAVTLRSGSEPERHVPVERTRRGRRAQAAPGTEGAPGGPTASQEAAEETKQEEEERLVLESNPLEWTVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAVKLCHQIERVRVAFYAQYAN", "length": 787, "header": "tr|A0A8W4FGU9-1|I3LJF5_PIG Computationally mapped isoform of Scm like with four mbt domains 2 OS=Sus scrofa OX=9823 GN=SFMBT2 PE=4 SV=1 CANONICAL=I3LJF5-1" }, "locus": { "chromosome": "10", "start_pos": 64066543, "end_pos": 63899415, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096897.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096897.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078661.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078661.1" } ] } }, { "isoform_ac": "A0A8W4FH59-1", "url": "https://www.uniprot.org/uniprotkb/I3LJF5/entry#A0A8W4FH59-1", "sequence": { "sequence": "METSVSVSSTQDPSSSPLEKHPSSADRNGDLDSEGGSGLEEAGFNWGEYLEETGASAAPHTSFKHVEISIQSNFQPGMKLEVANKKNPDTYWVATVITTCGQLLLLRYCGYGEDRRADFWCDVVIADLHPVGWCTQNNKTLMPPDAIKEKYTDWTEFLIRDLTGSRTAPASLLEGPLRGKGPLDLITVGSLLELQDSQNPFQYWIVSVIDNVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKTDSEWRCSLEKSLIDAAKCPLPMEVFKDHADLRSHFFTVGMKLEAVNMSEPSHVCPASVTKVFNSHFFQVTIDDLRPEPSKLSMLCHADSLGILPVQWCLKNGVSLTPPKGYSGQDFDWADYHKQRGTEEAPPFCFRNVLSLIINAAYKPGRVLRELQLVEDPRWNFQEETLKAKYRGKTYRAVAKIVRTSDQVADFCRRVCAKLECCPNLFSPVLVSENCPENCSIHTKTKYTYYYGKRKKIVKPPIGESTVESGHPKPARRRKRRKSIFVQKKRRSSTVDFVAGSGEESEEEDADAMDDDTGSEETGSELRDDQTDTSSAEVPPARPRRAVTLRSGSEPERHVPVERTRRGRRAQAAPGTEGAPGGPTASQEAAEETKQEEEERLVLESNPLEWTVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAVKLCHQIERVRVAFYAQYAN", "length": 729, "header": "tr|A0A8W4FH59-1|I3LJF5_PIG Computationally mapped isoform of Scm like with four mbt domains 2 OS=Sus scrofa OX=9823 GN=SFMBT2 PE=4 SV=1 CANONICAL=I3LJF5-1" }, "locus": { "chromosome": "10", "start_pos": 64066543, "end_pos": 63899415, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103859.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103859.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078211.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078211.1" } ] } }, { "isoform_ac": "I3LJF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LJF5/entry#I3LJF5-1", "sequence": { "sequence": "METSVSVSSTQDPSSSPLEKHPSSADRNGDLDSEGGSGLEEAGFNWGEYLEETGASAAPHTSFKHVEISIQSNFQPGMKLEVANKKNPDTYWVATVITTCGQLLLLRYCGYGEDRRADFWCDVVIADLHPVGWCTQNNKTLMPPDAIKEKYTDWTEFLIRDLTGSRTAPASLLEGPLRGKGPLDLITVGSLLELQDSQNPFQYWIVSVIDNVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKTDSEWRCSLEKSLIDAAKCPLPMEVFKDHADLRSHFFTVGMKLEAVNMSEPSHVCPASVTKVFNSHFFQVTIDDLRPEPSKLSMLCHADSLGILPVQWCLKNGVSLTPPKGYSGQDFDWADYHKQRGTEEAPPFCFRNTSFSRGFTKNMKLEAVNPRNPGEVCVASVVCVKGRLMWLHLEGLQSPAPEFIVDVESMDIFPVGWCEANSYPLTTPHKTVSQKKRKIAVVQPEKQPPPAVPAERTSHGLCFFPHLDAAGPASAAPANGKYCCPQLFINHRCFSGPYLNKGRIAELPQSVGPGKCVLVLKEVLSLIINAAYKPGRVLRELQLVEDPRWNFQEETLKAKYRGKTYRAVAKIVRTSDQVADFCRRVCAKLECCPNLFSPVLVSENCPENCSIHTKTKYTYYYGKRKKIVKPPIGESTVESGHPKPARRRKRRKSIFVQKKRRSSTVDFVAGSGEESEEEDADAMDDDTGSEETGSELRDDQTDTSSAEVPPARPRRAVTLRSGSEPERHVPVERTRRGRRAQAAPGTEGAPGGPTASQEAAEETKQEEEERLVLESNPLEWTVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAVKLCHQIERVRVAFYAQYAN", "length": 899, "header": "tr|I3LJF5-1|I3LJF5_PIG Isoform 1 of Scm like with four mbt domains 2 OS=Sus scrofa OX=9823 GN=SFMBT2 PE=4 SV=2 CANONICAL=I3LJF5-1" }, "locus": { "chromosome": "10", "start_pos": 64066543, "end_pos": 63899415, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026286.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026286.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024215.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024215.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 803, "start_aa": "Thr", "end_pos": 803, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr803", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FGU9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGU9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621009", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621009", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5Y8B8-1", "protein_name": "Scm-like with four mbt domains 2", "gene_name": "Sfmbt2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MERRLPVLKIRTSSSSLERITSPENGNGSLDTEEDSRQEETEFSWGDYLDETGARAVPHVCFRHVEISIQSNFQPGMKLEVANKNHPDTYWVATIITTCGQLLLLRYCGYGEDRRADFWCDVIIADLHPVGWCTQNNKVLRPPDAIKEKYADWEEFLIHELTGSRTAPASLLEGPLRGKGPIDLITVDSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEHTESYDRWLFYLDYRLRPIGWCQEKKYRMDPPSELYYLKLPFEWKCALEKALLAAAECPLPMEVFKDHADLGSHFFTVGMRLETLHINDPFHIYPATVTKVFNSQFFQVAIDDLRAETNGLTMLCHADSLGILPVQWCLKNGVNLAPPKGYSGQDFNWVDYHKQREAEGAPPYCFKNTFARGFAKNMKLEAVNPKNPGEVCVATVISVRGSLLWLRLEGVETPMPEIIVDIDSMDIFPVGWCEANSYPLTTPYKSSSKSKKKPITVPPEKPSLPPVPVENIPQELCLPPQTDTAAGAANEKYYCPQLFVNHRCFSGPFLNKGRISELPQSVGPGKCVLVLKEILTMITNAAYKPGRVLRELQLVEDPEWDFQEEVLKAKYRGKIYRAVVKIVRTADQVTSFCQQVCAKLECCPNLFSPLLISENCPENCSIRTKTKYTYYYGKRKRIIKPPLGESNTESAPKPTRRRKRRKSIYVQKKRKSSAVAMPATSAQETEEDDPEALDTASEETGYVVQNYKTQHVPVEMPFTRSQRAMILRKHSGAVKHPPVERARRVRSVHSTASSNNRNKVPLVRIEKSEDPRQSEEEKLILESNPLEWSVTDVVRFIKLTDCAPLARIFQEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVKVAFYAQYAN", "length": 890 }, "evidence": [ { "id": "I3LJF5", "url": "https://omabrowser.org/oma/group/I3LJF5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3GR66-1", "protein_name": "Scm-like with four MBT domains protein 1", "gene_name": "Sfmbt2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDRHLPVSKMQNSSSPLEKQTGPAYGNGDLDSEEGSGLEENGFSWGDYLEETGTRAAPHSSFRHVEISIQSNFQPGMKLEVANKNNPDTYWVATIITTCGQLLLLRYCGYGEDRRADFWCDVIIADLHPVGWCTQNNKVLMPPDAIKEKYTDWTEFLIRDLTGSRTAPANLLEGPLRGKGPIDLITVDSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMEPPSELYPLKMTSEWKCALEKALIVAAESPLPMEVFKDHADLRSHFFTVGMKLETVNMSEPFHICPASVTKVFNNHFFQVTIDDLRPESNKLSMLCHADSLGILPVQWCLKNGVNLTPPKGYLGQDFDWADYHKQHGAEEAPPFCFRNAAFNRGFTKNMKLEAVNPRNPGEVCVASVVSVKGRLLWLHLEGLQTPIPEVIVDMDSMDIFPVGWCEANFYPLTTPHKTVPDKKRKIAVVQPEKQLLSAVPVEKIPHDRCLLPHTDTAAGTVNGKYCCPQLFVNHRCFSGPFLNKGRIAELPQSVGPGKCVLVLKEVLSMIINAAYKPGRVLRELQLVEDPHWNFQEETLKAKYRGKTYRAVVKIVRTSDQVSNFCRRVCAKLECCPNLFSPVLISENCPENCSIHTKTKYTYYYGKRKKIIKPPIGESSIETPHPKPARRRKRRKSVFVQKRRRSSAVDCPAGSGEESEEEEADAPEDDTASEETSSEVRDDQTDTSSAEVPSARPRRAVTLRSNSEAVKRPPVERARRVRPVPTTPSADEGNKGPPAKPAEPESHLARRQGRSKYSKPKTKQKKGPSTCAPLTLETSLRRPDHALKGVVRHTRSQHLAGMVKVSPTELPSSQETKQEEEERLILESNPLEWTVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVKVAFYAQYAN", "length": 963 }, "evidence": [ { "id": "I3LJF5", "url": "https://omabrowser.org/oma/group/I3LJF5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5VUG0-1", "protein_name": "Scm-like with four MBT domains protein 2", "gene_name": "SFMBT2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESTLSASNMQDPSSSPLEKCLGSANGNGDLDSEEGSSLEETGFNWGEYLEETGASAAPHTSFKHVEISIQSNFQPGMKLEVANKNNPDTYWVATIITTCGQLLLLRYCGYGEDRRADFWCDVVIADLHPVGWCTQNNKVLMPPDAIKEKYTDWTEFLIRDLTGSRTAPANLLEGPLRGKGPIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKMASEWKCTLEKSLIDAAKFPLPMEVFKDHADLRSHFFTVGMKLETVNMCEPFYISPASVTKVFNNHFFQVTIDDLRPEPSKLSMLCHADSLGILPVQWCLKNGVSLTPPKGYSGQDFDWADYHKQHGAQEAPPFCFRNTSFSRGFTKNMKLEAVNPRNPGELCVASVVSVKGRLMWLHLEGLQTPVPEVIVDVESMDIFPVGWCEANSYPLTAPHKTVSQKKRKIAVVQPEKQLPPTVPVKKIPHDLCLFPHLDTTGTVNGKYCCPQLFINHRCFSGPYLNKGRIAELPQSVGPGKCVLVLKEVLSMIINAAYKPGRVLRELQLVEDPHWNFQEETLKAKYRGKTYRAVVKIVRTSDQVANFCRRVCAKLECCPNLFSPVLISENCPENCSIHTKTKYTYYYGKRKKISKPPIGESNPDSGHPKPARRRKRRKSIFVQKKRRSSAVDFTAGSGEESEEEDADAMDDDTASEETGSELRDDQTDTSSAEVPSARPRRAVTLRSGSEPVRRPPPERTRRGRGAPAASSAEEGEKCPPTKPEGTEDTKQEEEERLVLESNPLEWTVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVKVAFYAQYAN", "length": 894 }, "evidence": [ { "id": "I3LJF5", "url": "https://omabrowser.org/oma/group/I3LJF5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "transcription corepressor activity", "id": "GO:0003714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003714", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of gene expression", "id": "GO:0010629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010629", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "I3LJF5", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 310, "end_pos": 312, "annotation": "n_glycosylation_sequon" }, { "start_pos": 401, "end_pos": 403, "annotation": "n_glycosylation_sequon" }, { "start_pos": 657, "end_pos": 659, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LJF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LJF5" }, { "id": "PS51079", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51079" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MBT", "eco_id": "ECO_0000259", "start_pos": 44, "end_pos": 144, "start_aa": "Phe", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 803 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 138, "end_pos": 140 }, { "start_pos": 310, "end_pos": 312 }, { "start_pos": 401, "end_pos": 403 }, { "start_pos": 657, "end_pos": 659 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", 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"database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QQA9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQA9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQA9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QSK3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QSK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSK3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAF3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAF3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAF3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHB7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHB7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHB7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHB7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJW3-1", "url": "https://www.uniprot.org/uniprotkb/I3LJW3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSSAAFYLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQHAVTIGTDMLELDCHITKDEQVVVSHDENLKRSTGVNVNISDLKYCELPPYLGKLDVSFQKACQCEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNLLIKKVSELVKQYRREHITVWGNASYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDILLMRKALFDHLTARGIQVYIWVLNEEQEYKRAFDLGATGVMTDYPTKLKDFLHNVSE", "length": 314, "header": "tr|I3LJW3-1|I3LJW3_PIG Isoform 1 of Glycerophosphodiester phosphodiesterase domain containing 1 OS=Sus scrofa OX=9823 GN=GDPD1 PE=1 SV=1 CANONICAL=I3LJW3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQA9-1", "url": 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"isoform_ac": "A0A5G2RAF3-1", "url": "https://www.uniprot.org/uniprotkb/I3LJW3/entry#A0A5G2RAF3-1", "sequence": { "sequence": "MSSSAAFYLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGERGPQNPMAEVGGVTIGTDMLELDCHITKDEQVVVSHDENLKRSTGVNVNISDLKYCELPPYLGKLDVSFQKACQCEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNLLIKKVSELVKQYRREHITVWGNASYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDILLMRKALFDHLTARGIQVYIWVLNEEQEYKRAFDLGATGVMTDYPTKLKDFLHNVSE", "length": 312, "header": "tr|A0A5G2RAF3-1|A0A5G2RAF3_PIG Computationally mapped isoform of Glycerophosphodiester phosphodiesterase domain containing 1 OS=Sus scrofa OX=9823 GN=LOC100739561 PE=1 SV=1 CANONICAL=I3LJW3-1" }, "locus": { "chromosome": "12", "start_pos": 35526384, "end_pos": 35481343, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069727.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069727.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067354.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067354.1" } ] } }, { "isoform_ac": "A0A8W4FHB7-1", "url": "https://www.uniprot.org/uniprotkb/I3LJW3/entry#A0A8W4FHB7-1", "sequence": { "sequence": "MGSKHVCSLHHSSRQCWILNPLSEARDRTCNFMVPGAGENLENTMAAFQHAVTIGTDMLELDCHITKDEQVVVSHDENLKRSTGVNVNISDLKYCELPPYLGKLDVSFQKACQCEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNLLIKKVSELVKQYRREHITVWGNASYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDILLMRKALFDHLTARGIQVSFWNDAFYFFCLAEPASYSSPQARGRIRAIAAGLHHSHSNTGSEPHLRSTPQLTATLDP", "length": 322, "header": "tr|A0A8W4FHB7-1|I3LJW3_PIG Computationally mapped isoform of Glycerophosphodiester phosphodiesterase domain containing 1 OS=Sus scrofa OX=9823 GN=GDPD1 PE=1 SV=1 CANONICAL=I3LJW3-1" }, "locus": { "chromosome": "AEMK02000623.1", "start_pos": 82697, "end_pos": 40379, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093274.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093274.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078271.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078271.1" } ] } }, { "isoform_ac": "I3LJW3-1", "url": "https://www.uniprot.org/uniprotkb/I3LJW3/entry#I3LJW3-1", "sequence": { "sequence": "MSSSAAFYLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQHAVTIGTDMLELDCHITKDEQVVVSHDENLKRSTGVNVNISDLKYCELPPYLGKLDVSFQKACQCEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNLLIKKVSELVKQYRREHITVWGNASYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDILLMRKALFDHLTARGIQVYIWVLNEEQEYKRAFDLGATGVMTDYPTKLKDFLHNVSE", "length": 314, "header": "tr|I3LJW3-1|I3LJW3_PIG Isoform 1 of Glycerophosphodiester phosphodiesterase domain containing 1 OS=Sus scrofa OX=9823 GN=GDPD1 PE=1 SV=1 CANONICAL=I3LJW3-1" }, "locus": { "chromosome": "AEMK02000623.1", "start_pos": 84152, "end_pos": 39894, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052985.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052985.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049651.1", "url": "https://www.ensembl.org/id/ENSSSCP00000049651.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 65, "start_aa": "Thr", "end_pos": 65, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr65", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FHB7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHB7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626512", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626512", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MF98-1", "protein_name": "Lysophospholipase D GDPD1", "gene_name": "Gdpd1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSTAAFCLLSTLGGYLVTSFLLLKYPTLLHQKKKQRFLSRHISHRGGAGENLENTMTAFQHAVNIGTDMLELDCHITKDEQVVVSHDANLKRSTGINVNVSDLKYSELPPYLCKLDVPFQRASKSEGKDTRIPLLKEVFEAFPETPINIDIKVNNNVLIRKVSELVKQYKREHLTVWGNASSEIVEKCFKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSKSHKFLVWLSDTLLMRKALFDHLTARGIQVYVWVLNEEHEFKRAFDLGATGVMTDYPTKLKHFLNNFPA", "length": 314 }, "evidence": [ { "id": "I3LJW3", "url": "https://omabrowser.org/oma/group/I3LJW3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A1A4J7-1", "protein_name": "Nonsense-mediated mRNA decay factor SMG8", "gene_name": "SMG8", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGPVSLRELLMGASAWTSSESPEGSPTEGGGSAAGGPEPPWREDEICVVGIFGKTALRLNSEKFSLVNTVCDRQVFPLFRHQDPGDSGAGIRTEAGAVGEAGGAGDPGAGAGAGAGAGAGDPVRGGVTAAEGNRTEPGSQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSLPHAEAHEFWKHQEKVQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLLDQLKSHCTVKDPESLLVPAPLSGSRRYQVMRQHSRQQLSFHTDTSSSSSSGQLVDFTLREFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDPASPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAPAKNESSPAPPDADADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDNPEVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAVPGKRSAVVMGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVPDAPLQIILTPQVRPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAYVTERGPCFPPKENVQLMSYKVLRGVLKAVTQ", "length": 999 }, "evidence": [ { "id": "I3LJW3", "url": "https://omabrowser.org/oma/group/I3LJW3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8N9F7-1", "protein_name": "Lysophospholipase D GDPD1", "gene_name": "GDPD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSTAAFYLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQHAVKIGTDMLELDCHITKDEQVVVSHDENLKRATGVNVNISDLKYCELPPYLGKLDVSFQRACQCEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNVLIKKVSELVKRYNREHLTVWGNANYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDLLLMRKALFDHLTARGIQVYIWVLNEEQEYKRAFDLGATGVMTDYPTKLRDFLHNFSA", "length": 314 }, "evidence": [ { "id": "I3LJW3", "url": "https://omabrowser.org/oma/group/I3LJW3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CRY7-1", "protein_name": "Lysophospholipase D GDPD1", "gene_name": "Gdpd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTAAFCLLSTLGGYLVTSFLLLKYPALLHQRKKQRFLSRHISHRGGAGENLENTMAAFQHAVTIGTDMLELDCHITKDEQVVVSHDANLKRSTGVNVNVSDLKYCELPPYLCKLDVPFQRACKCEGKDTRIPLLKEVFEAFPETPINIDIKVNNNVLIKKVSELVKQYKREHLTVWGNANSEIVDKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTISKGHKFLIWLSDTLLMRKALFDHLTARGIQVYVWVLNEEYEYKRAFDLGATGVMTDYPTKLKDFLNNFSA", "length": 314 }, "evidence": [ { "id": "I3LJW3", "url": "https://omabrowser.org/oma/group/I3LJW3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" }, { "name": "N-acylethanolamine metabolic process", "id": "GO:0070291", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070291", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" }, { "name": "glycerophospholipid catabolic process", "id": "GO:0046475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046475", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "phosphoric diester hydrolase activity", "id": "GO:0008081", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008081", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" }, { "name": "phosphatidylcholine lysophospholipase activity", "id": "GO:0004622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004622", "evidence": [ { "database": "UniProtKB", "id": "I3LJW3", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 100, "end_pos": 102, "annotation": "n_glycosylation_sequon" }, { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" }, { "start_pos": 311, "end_pos": 313, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "41143", "name": "", "equation": "1-O-hexadecyl-sn-glycero-3-phosphocholine + H2O = 1-O-hexadecyl-sn-glycero-3-phosphate + choline + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "41143", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/41143" } ] }, { "id": "45544", "name": "", "equation": "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-1-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + 1-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45544", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45544" } ] }, { "id": "53168", "name": "", "equation": "N-hexadecanoyl-1-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-hexadecanoylethanolamine + 1-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53168", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53168" } ] }, { "id": "53184", "name": "", "equation": "1-O-(1Z-octadecenyl)-sn-glycero-3-phospho-N-hexadecanoyl-ethanolamine + H2O = 1-O-(1Z-octadecenyl)-sn-glycero-3-phosphate + N-hexadecanoylethanolamine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53184", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53184" } ] }, { "id": "56460", "name": "", "equation": "N,1-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(9Z-octadecenoyl) ethanolamine + 1-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "56460", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/56460" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LJW3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LJW3" }, { "id": "PS51704", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51704" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GP-PDE", "eco_id": "ECO_0000259", "start_pos": 40, "end_pos": 309, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 65 ], "snv_sites": [], "glycation_sites": [], 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"PF06775", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06775", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B1Z9", "url": "https://www.uniprot.org/uniprotkb/A0A287B1Z9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B1Z9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B1Z9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDR0", "url": "https://www.uniprot.org/uniprotkb/A0A287BDR0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDR0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDR0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJR6", "url": "https://www.uniprot.org/uniprotkb/A0A287BJR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJR6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNX6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNX6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC49-1", "url": "https://www.uniprot.org/uniprotkb/I3LC49-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKEMADQKEGEAKEKEVCRDQIKESDKEEEPPAAASHGQGWRPGGRAPRNSRPEPGVRPPALPNMVNDPPVPALLWAQEMGHVLAGRARKLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSSSLLCSFPVANVSLAKGGRDRVLMYGQPYRVTLELELPESRVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSDLLQMLDTLVFSSLLLFGFAEQKQILEVELYPEYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYLLYNFPMTCAFVGVASNFTFLSVIVLFSYMQWVWGGVWPRHRVSPPQVNVRNRDGSRKKVQRRIAARQPGTGPQSQEAAPQLSQVTEHRESPAAPSGTAAEGQLSPEEKPDQQQPLSGEEEPEPEASDGSGSWEDATLLTETSLPVPAPALAPETVGSSESSAGTVRQRPMCSSS", "length": 465, "header": "tr|I3LC49-1|I3LC49_PIG Isoform 1 of BSCL2 lipid droplet biosis associated, seipin OS=Sus scrofa OX=9823 GN=BSCL2 PE=4 SV=3 CANONICAL=I3LC49-1" }, "isoforms": [ { "isoform_ac": "A0A287B1Z9-1", "url": "https://www.uniprot.org/uniprotkb/I3LC49/entry#A0A287B1Z9-1", "sequence": { "sequence": "MSKEMADQKEGEAKEKEVCRDQIKESDKEEEPPAAASHGQGWRPGGRAPRNSRPEPGVRPPALPNMVNDPPVPALLWAQEMGHVLAGRARKLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSSSLLCSFPVANVSLAKGGRDRVLMYGQPYRVTLELELPESRVNQDLGMFLVTISCYTRGGRIISTSSRSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYLLYNFPMTCAFVGVASNFTFLSVIVLFSYMQWVWGGVWPRHRSLQVNVRNRDGSRKKVQRRIAARQPGPQSQEAAPQLSQVTEHRESPAAPSGTEGQLSPEEKPDQQQPLSGEEEPEPEASDGSGSWEDATLLTETSLPVPAPALAPETVGSSESSAGTVRQRPMCSSS", "length": 414, "header": "tr|A0A287B1Z9-1|A0A287B1Z9_PIG Computationally mapped isoform of BSCL2 lipid droplet biosis associated, seipin OS=Sus scrofa OX=9823 GN=BSCL2 PE=4 SV=2 CANONICAL=I3LC49-1" }, "locus": { "chromosome": "2", "start_pos": 9064792, "end_pos": 9055123, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055749.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055749.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050112.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050112.2" } ] } }, { "isoform_ac": "A0A287BDR0-1", "url": "https://www.uniprot.org/uniprotkb/I3LC49/entry#A0A287BDR0-1", "sequence": { "sequence": "MSKEMADQKEGEAKEKEVCRDQIKESDKEEEPPAAASHGQGWRPGGRAPRNSRPEPGVRPPALPNMVNDPPVPALLWAQEMGHVLAGRARKLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSSSLLCSFPVANVSLAKGGRDRVLMYGQPYRVTLELELPESRVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSDLLQMLDTLVFSSLLLFGFAEQKQILEVELYPEYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYLLYNFPMTCAFVGVASNFTFLSVIVLFSYMQWVWGGVWPRHRSLQVNVRNRDGSRKKVQRRIAARQPGPQSQEAAPQLSQVTEHKSDLSLPPPAAEGQLSPEEKPDQQQPLSGEEEPEPEASDGSGSWEDATLLTETSLPVPAPALAPETVGSSESSAGTVRQRPMCSSS", "length": 460, "header": "tr|A0A287BDR0-1|A0A287BDR0_PIG Computationally mapped isoform of BSCL2 lipid droplet biosis associated, seipin OS=Sus scrofa OX=9823 GN=BSCL2 PE=4 SV=2 CANONICAL=I3LC49-1" }, "locus": { "chromosome": "2", "start_pos": 9064792, "end_pos": 9055123, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057466.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057466.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058339.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058339.2" } ] } }, { "isoform_ac": "A0A287BJR6-1", "url": "https://www.uniprot.org/uniprotkb/I3LC49/entry#A0A287BJR6-1", "sequence": { "sequence": "MVNDPPVPALLWAQEMGHVLAGRARKLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSSSLLCSFPVANVSLAKGGRDRVLMYGQPYRVTLELELPESRVNQDLGMFLVTISCYTRGGRIISTSSRSPPAVRLCRAEADPGGGAIPGIQRELVRADHRRHYRDPQQAHPAVRRLPPHPCPLHWAQVPAVQLPHDLRLRRRRQQLHLPQCHRALQLHAVGVGRRLAPTPLSLQVNVRNRDGSRKKVQRRIAARQPGTGPQSQEAAPQLSQVTEHRESPAAPSGTAAEGQLSPEEKPDQQQPLSGEEEPEPEASDGSGSWEDATLLTETSLPVPAPALAPETVGSSESSAGTVRQRPMCSSS", "length": 379, "header": "tr|A0A287BJR6-1|A0A287BJR6_PIG Computationally mapped isoform of BSCL2 lipid droplet biosis associated, seipin OS=Sus scrofa OX=9823 GN=BSCL2 PE=4 SV=2 CANONICAL=I3LC49-1" }, "locus": { "chromosome": "2", "start_pos": 9064792, "end_pos": 9056790, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061218.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061218.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056622.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056622.2" } ] } }, { "isoform_ac": "A0A8W4FNX6-1", "url": "https://www.uniprot.org/uniprotkb/I3LC49/entry#A0A8W4FNX6-1", "sequence": { "sequence": "MSKEMADQKEGEAKEKEVCRDQIKESDKEEEPPAAASHGQGWRPGGRAPRNSRPEPGVRPPALPNMVNDPPVPALLWAQEMGHVLAGRARKLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSSSLLCSFPVANVSLAKGGRDRVLMYGQPYRVTLELELPESRVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSDLLQMLDTLVFSSLLLFGFAEQKQILEVELYPEYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRTSETETAPERKSSEGLLPASQGPKARRRPLSCHRLQSTGRALQPPRGQRASCPQRRSQISSSP", "length": 352, "header": "tr|A0A8W4FNX6-1|I3LC49_PIG Computationally mapped isoform of BSCL2 lipid droplet biosis associated, seipin OS=Sus scrofa OX=9823 GN=BSCL2 PE=4 SV=1 CANONICAL=I3LC49-1" }, "locus": { "chromosome": "2", "start_pos": 9064496, "end_pos": 9055123, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093044.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093044.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080010.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080010.1" } ] } }, { "isoform_ac": "I3LC49-1", "url": "https://www.uniprot.org/uniprotkb/I3LC49/entry#I3LC49-1", "sequence": { "sequence": "MSKEMADQKEGEAKEKEVCRDQIKESDKEEEPPAAASHGQGWRPGGRAPRNSRPEPGVRPPALPNMVNDPPVPALLWAQEMGHVLAGRARKLLLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSSSLLCSFPVANVSLAKGGRDRVLMYGQPYRVTLELELPESRVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSDLLQMLDTLVFSSLLLFGFAEQKQILEVELYPEYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYLLYNFPMTCAFVGVASNFTFLSVIVLFSYMQWVWGGVWPRHRVSPPQVNVRNRDGSRKKVQRRIAARQPGTGPQSQEAAPQLSQVTEHRESPAAPSGTAAEGQLSPEEKPDQQQPLSGEEEPEPEASDGSGSWEDATLLTETSLPVPAPALAPETVGSSESSAGTVRQRPMCSSS", "length": 465, "header": "tr|I3LC49-1|I3LC49_PIG Isoform 1 of BSCL2 lipid droplet biosis associated, seipin OS=Sus scrofa OX=9823 GN=BSCL2 PE=4 SV=3 CANONICAL=I3LC49-1" }, "locus": { "chromosome": "2", "start_pos": 9064792, "end_pos": 9055123, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025488.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025488.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021622.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021622.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FNX6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNX6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49" } ], "pmid": "" }, { "name": "lipid droplet formation", "id": "GO:0140042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140042", "evidence": [ { "database": "UniProtKB", "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49" } ], "pmid": "" }, { "name": "lipid storage", "id": "GO:0019915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019915", "evidence": [ { "database": "UniProtKB", "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49" } ], "pmid": "" }, { "name": "lipid droplet organization", "id": "GO:0034389", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034389", "evidence": [ { "database": "UniProtKB", "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "phospholipid binding", "id": "GO:0005543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005543", "evidence": [ { "database": "UniProtKB", "id": "I3LC49", "url": "https://www.uniprot.org/uniprotkb/I3LC49" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 153, "end_pos": 155, "annotation": "n_glycosylation_sequon" }, { "start_pos": 307, "end_pos": 309, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC49-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 465, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC49-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC49" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 153, "end_pos": 155 }, { "start_pos": 307, "end_pos": 309 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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"sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", 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"https://www.ebi.ac.uk/interpro/entry/IPR036273", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152248", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152248", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KQRVYMH", "url": "https://omabrowser.org/oma/group/KQRVYMH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZSF1", "url": "https://www.orthodb.org/?gene=A0A286ZSF1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10174", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10174", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10174:SF225", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10174:SF225", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00650", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00650", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03765", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03765", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8877627", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8877627", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020944969", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944969", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCD5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCD5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCD5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEAPGPAGAQLSLLPDHSPLLQPSLAELRRRARAPGSPLLPGPLSDAFLLRFLRARDFDLDLAWRLLRNYYKWRAECPEISADLHPRSILGLLKAGYLGVLRARDPTGSKVLIYRIAHWNPNVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWHFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPIIFHAVFSMIKPFLTEKIKARIHMHGNDYKQSLLQHFPDILPLEYGGEEVSMEDICQEWTNFIMKSENYLSSISQDR", "length": 275, "header": "tr|A0A286ZSF1-1|A0A286ZSF1_PIG Isoform 1 of Alpha-tocopherol transfer protein OS=Sus scrofa OX=9823 GN=TTPA PE=4 SV=1 CANONICAL=A0A286ZSF1-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1/entry#A0A286ZSF1-1", "sequence": { "sequence": "MAEAPGPAGAQLSLLPDHSPLLQPSLAELRRRARAPGSPLLPGPLSDAFLLRFLRARDFDLDLAWRLLRNYYKWRAECPEISADLHPRSILGLLKAGYLGVLRARDPTGSKVLIYRIAHWNPNVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWHFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPIIFHAVFSMIKPFLTEKIKARIHMHGNDYKQSLLQHFPDILPLEYGGEEVSMEDICQEWTNFIMKSENYLSSISQDR", "length": 275, "header": "tr|A0A286ZSF1-1|A0A286ZSF1_PIG Isoform 1 of Alpha-tocopherol transfer protein OS=Sus scrofa OX=9823 GN=TTPA PE=4 SV=1 CANONICAL=A0A286ZSF1-1" }, "locus": { "chromosome": "4", "start_pos": 70978283, "end_pos": 70961684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039902.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039902.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034581.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034581.1" } ] } }, { "isoform_ac": "A0A8W4FCD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1/entry#A0A8W4FCD5-1", "sequence": { "sequence": "MAEAPGPAGAQLSLLPDHSPLLQPSLAELRRRARAPGSPLLPGPLSDAFLLRFLRARDFDLDLAWRLLRNYYKWRAECPEISADLHPRSILGLLKAGYLGVLRARDPTGSKVLIYRIAHWNPNVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWHFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPIIFHAVFSMIKPFLTEKIKARMYLRVNKITYTRGFIVAKDWKLPDSYAWERLQTKLTSAFPRHSSTGIWWGRSLNGGHLSGVDKFYNEV", "length": 287, "header": "tr|A0A8W4FCD5-1|A0A286ZSF1_PIG Computationally mapped isoform of Alpha-tocopherol transfer protein OS=Sus scrofa OX=9823 GN=TTPA PE=4 SV=1 CANONICAL=A0A286ZSF1-1" }, "locus": { "chromosome": "4", "start_pos": 70978249, "end_pos": 70961684, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095244.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095244.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076980.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076980.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCD5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCD5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152248", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152248", "resource": "KEGG Pathway" }, { "id": "R-SSC-8877627", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8877627", "resource": "Reactome", "description": "Vitamin E transport" } ], "orthologs": [ { "uniprot_canonical_ac": "B0S5J5-1", "protein_name": "Alpha-tocopherol transfer protein", "gene_name": "ttpa", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKSEEVDETEELNNLPVDSSRIAPYLSELKEKAEAELRIRDLDLSKTFLIRFLQARDFDVALALKLLINYHKWRQECPEITADLRPSSVIGLLQNNYHGVLRSRDDAGSRVLIYRIGKWNPKEFTAYEVFRVSLITSELIVQEWETQRNGLKAIFDLQDWCFAHALQINPSLAKKISSVLTDSFPLKVRGIHLINEPIFFRPVFAMIRPFLPDKIKQRIHMHGCSYARSLCNYFPKAVLPPVYGGTGPSVDEVCQEWTEYIMQSEDYLHRLSVDLGGEGGHASQS", "length": 285 }, "evidence": [ { "id": "A0A286ZSF1", "url": "https://omabrowser.org/oma/group/A0A286ZSF1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1N086-1", "protein_name": "Alpha-tocopherol transfer protein", "gene_name": "TTPA", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAEARPGPAGLQLSALPDHSPLLQPSLAELRRRAGAAGAPLAGWLLSDAFLLRFLRARDFDLDLAWRLLKNYFKWRAECPEISADLHPRSILGLLKSGYVGVLRARDPTGSKVLIYRIAHWDPKVFTAYDAFRVSLITSELIVQEVETQRNGIKAVFDLEGWQFAHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPIIFHAVFSMIKPFLTEKIKERIHMHGDNYKQSLLQYFPDILPLEYGGEEYSIEDICQEWTNFIMKSENYLSSISQTVKGEEVT", "length": 282 }, "evidence": [ { "id": "A0A286ZSF1", "url": "https://omabrowser.org/oma/group/A0A286ZSF1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P41034-1", "protein_name": "Alpha-tocopherol transfer protein", "gene_name": "Ttpa", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEMRPGPVVGKQLNEQPDHSPLVQPGLAELRRRAQEEGVPETPQPLTDAFLLRFLRARDFDLDLAWRLMKNYYKWRAECPELSADLHPRSILGLLKAGYHGVLRSRDPTGSRVLIYRISYWDPKVFTAYDVFRVSLITSELIVQEVETQRNGVKAIFDLEGWQISHAFQITPSVAKKIAAVVTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGRIHLHGNNYKSSLLQHFPDILPLEYGGNESSMEDICQEWTNFIMKSEDYLSSISETIQ", "length": 278 }, "evidence": [ { "id": "A0A286ZSF1", "url": "https://omabrowser.org/oma/group/A0A286ZSF1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P49638-1", "protein_name": "Alpha-tocopherol transfer protein", "gene_name": "TTPA", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ", "length": 278 }, "evidence": [ { "id": "A0A286ZSF1", "url": "https://omabrowser.org/oma/group/A0A286ZSF1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BWP5-1", "protein_name": "Alpha-tocopherol transfer protein", "gene_name": "Ttpa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEMRPGPLVGKQLNELPDHSPLLQPGLAELRRRVQEAGVPQTPQPLTDAFLLRFLRARDFDLDLAWRLMKNYYKWRAECPELSADLRPRSILGLLKAGYHGVLRSRDSTGSRVLIYRIAYWDPKVFTAYDVFRVSLITSELIVQEVETQRNGVKAIFDLEGWQVSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKDRIHLHGNNYKSSMLQHFPDILPREYGGKEFSMEDICQEWTNFIMKSEDYLSSISETIQ", "length": 278 }, "evidence": [ { "id": "A0A286ZSF1", "url": "https://omabrowser.org/oma/group/A0A286ZSF1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "phosphatidylinositol bisphosphate binding", "id": "GO:1902936", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902936", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" }, { "name": "vitamin E binding", "id": "GO:0008431", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008431", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" }, { "name": "lipid transfer activity", "id": "GO:0120013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120013", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" }, { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "vitamin transport", "id": "GO:0051180", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051180", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" }, { "name": "vitamin E metabolic process", "id": "GO:0042360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042360", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZSF1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 275, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZSF1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZSF1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZSF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSF1" }, { "id": "PS50191", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50191" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CRAL-TRIO", "eco_id": "ECO_0000259", "start_pos": 86, "end_pos": 251, "start_aa": "His", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LCD8-1", "uniprot_ac": "I3LCD8", "uniprot_id": "I3LCD8_PIG", "mass": { "chemical_mass": 32975.0, "monoisotopic_mass": 32975.0 }, "refseq": { "ac": "XP_020926520", "name": "junctional adhesion molecule B", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926520" }, "gene_names": [ { "name": "JAM2", "type": "recommended", "evidence": [ { "id": "I3LCD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ] }, { "name": "JAM2", "type": "synonym", "evidence": [ { "id": "XP_020926520", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926520" } ] } ], "protein_names": [ { "name": "Junctional adhesion molecule B", "type": "recommended", "evidence": [ { "id": "I3LCD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#names_and_taxonomy" } ] }, { "name": "Junctional adhesion molecule 2", "type": "synonym", "evidence": [ { "id": "I3LCD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#names_and_taxonomy" } ] }, { "name": "Vascular endothelial junction-associated molecule", "type": "synonym", "evidence": [ { "id": "I3LCD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#names_and_taxonomy" } ] }, { "name": "junctional adhesion molecule B", "type": "synonym", "evidence": [ { "id": "XP_020926520", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926520" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "JAM2", "url": "https://www.uniprot.org/uniprotkb/I3LCD8", "locus": { "chromosome": "13", "start_pos": 189275839, "end_pos": 189165975, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023028", "url": "https://www.ensembl.org/id/ENSSSCG00000023028" } ] } } ], "crossref": [ { "id": "I3LCD8", "url": "https://alphafold.ebi.ac.uk/entry/I3LCD8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023028", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023028", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "102166598", "url": "https://www.ncbi.nlm.nih.gov/gene/102166598", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042625", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042625", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102166598", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102166598", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ASEYRWY", "url": "https://omabrowser.org/oma/group/ASEYRWY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LCD8", "url": "https://www.orthodb.org/?gene=I3LCD8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44663", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44663", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44663:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44663:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-202733", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-202733", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-216083", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-216083", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020926520", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926520", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZIP6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZIP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZIP6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNT2", "url": "https://www.uniprot.org/uniprotkb/A0A287BNT2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNT2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNT2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9R8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9R8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTK5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTK5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTK5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCD8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCD8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQW2", "url": "https://www.uniprot.org/uniprotkb/I3LQW2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQW2-1", "url": "https://www.uniprot.org/uniprotkb/I3LQW2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARRSRHRLLLLLLRYLVVALDYHKACGFSDPKDHHVVTAIEYQEVILACKYPKKTVSSRLEWKKLGRGISFVYYQQALQGAFKDRAELIDFSIRIKNVTRNDAGKYRCEISAPSEQGQNLAEDTVTLEVLVAPAVPSCEVPSSALSGTTVELRCQDKEGNPAPEYTWFKDGIRLSGNPRLDAQSTNSSYTMNVKSGSLQFNAVSKLDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVAIVISLCGLGVCYAQRKGYFSKETSFQKSGSASKAPTMSENDFKHTKSFII", "length": 298, "header": "tr|I3LCD8-1|I3LCD8_PIG Isoform 1 of Junctional adhesion molecule B OS=Sus scrofa OX=9823 GN=JAM2 PE=1 SV=2 CANONICAL=I3LCD8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZIP6-1", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#A0A286ZIP6-1", "sequence": { "sequence": "GTVTSVLFFHGQPCRLYRRHLPTRGLTRFFKDHKACGFSDPKDHHVVTAIEYQEVILACKYPKKTVSSRLEWKKLGRGISFVYYQQALQGAFKDRAELIDFSIRIKNVTRNDAGKYRCEISAPSEQGQNLAEDTVTLEVLVAPAVPSCEVPSSALSGTTVELRCQDKEGNPAPEYTWFKDGIRLSGNPRLDAQSTNSSYTMNVKSGSLQFNAVSKLDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVAIVISLCGLGVCYAQRKGYFSSK", "length": 279, "header": "tr|A0A286ZIP6-1|I3LCD8_PIG Computationally mapped isoform of Junctional adhesion molecule B OS=Sus scrofa OX=9823 GN=JAM2 PE=1 SV=2 CANONICAL=I3LCD8-1" }, "locus": { "chromosome": "13", "start_pos": 189264583, "end_pos": 189166148, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036930.3", "url": "https://www.ensembl.org/id/ENSSSCT00000036930.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031449.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031449.3" } ] } }, { "isoform_ac": "A0A287BNT2-1", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#A0A287BNT2-1", "sequence": { "sequence": "IMPTTPNHKACGFSDPKDHHVVTAIEYQEVILACKYPKKTVSSRLEWKKLGRGISFVYYQQALQGAFKDRAELIDFSIRIKNVTRNDAGKYRCEISAPSEQGQNLAEDTVTLEVLVAPAVPSCEVPSSALSGTTVELRCQDKEGNPAPEYTWFKDGIRLSGNPRLDAQSTNSSYTMNVKSGSLQFNAVSKLDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVAIVISLCGLGVCYAQRKGYFSSK", "length": 254, "header": "tr|A0A287BNT2-1|A0A287BNT2_PIG Computationally mapped isoform of Junctional adhesion molecule B OS=Sus scrofa OX=9823 GN=JAM2 PE=1 SV=3 CANONICAL=I3LCD8-1" }, "locus": { "chromosome": "13", "start_pos": 189264583, "end_pos": 189239197, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059102.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059102.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057834.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057834.3" } ] } }, { "isoform_ac": "A0A5G2Q9R8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#A0A5G2Q9R8-1", "sequence": { "sequence": "MSCLFHLSDHKACGFSDPKDHHVVTAIEYQEVILACKYPKKTVSSRLEWKKLGRGISFVYYQQALQGAFKDRAELIDFSIRIKNVTRNDAGKYRCEISAPSEQGQNLAEDTVTLEVLVAPAVPSCEVPSSALSGTTVELRCQDKEGNPAPEYTWFKDGIRLSGNPRLDAQSTNSSYTMNVKSGSLQFNAVSKLDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVAIVISLCGLGVCYAQRKGYFSNLLELPFGDTVSLM", "length": 268, "header": "tr|A0A5G2Q9R8-1|I3LCD8_PIG Computationally mapped isoform of Junctional adhesion molecule B OS=Sus scrofa OX=9823 GN=JAM2 PE=1 SV=3 CANONICAL=I3LCD8-1" }, "locus": { "chromosome": "13", "start_pos": 189265167, "end_pos": 189239979, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074077.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074077.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060708.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060708.2" } ] } }, { "isoform_ac": "A0A5G2QTK5-1", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#A0A5G2QTK5-1", "sequence": { "sequence": "MARRSRHRLLLLLLRYLVVALDYHKACGFSDPKDHHVVTAIEYQGAFKDRAELIDFSIRIKNVTRNDAGKYRCEISAPSEQGQNLAEDTVTLEVLVAPAVPSCEVPSSALSGTTVELRCQDKEGNPAPEYTWFKDGIRLSGNPRLDAQSTNSSYTMNVKSGSLQFNAVSKLDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVAIVISLCGLGVCYAQRKGYFSKETSFQKSGSASKAPTMSENDFKHTKSFII", "length": 262, "header": "tr|A0A5G2QTK5-1|I3LCD8_PIG Computationally mapped isoform of Junctional adhesion molecule B OS=Sus scrofa OX=9823 GN=JAM2 PE=1 SV=1 CANONICAL=I3LCD8-1" }, "locus": { "chromosome": "13", "start_pos": 189273690, "end_pos": 189200330, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075916.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075916.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068168.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068168.1" } ] } }, { "isoform_ac": "I3LCD8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#I3LCD8-1", "sequence": { "sequence": "MARRSRHRLLLLLLRYLVVALDYHKACGFSDPKDHHVVTAIEYQEVILACKYPKKTVSSRLEWKKLGRGISFVYYQQALQGAFKDRAELIDFSIRIKNVTRNDAGKYRCEISAPSEQGQNLAEDTVTLEVLVAPAVPSCEVPSSALSGTTVELRCQDKEGNPAPEYTWFKDGIRLSGNPRLDAQSTNSSYTMNVKSGSLQFNAVSKLDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVAIVISLCGLGVCYAQRKGYFSKETSFQKSGSASKAPTMSENDFKHTKSFII", "length": 298, "header": "tr|I3LCD8-1|I3LCD8_PIG Isoform 1 of Junctional adhesion molecule B OS=Sus scrofa OX=9823 GN=JAM2 PE=1 SV=2 CANONICAL=I3LCD8-1" }, "locus": { "chromosome": "13", "start_pos": 189273690, "end_pos": 189200330, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024945.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024945.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021713.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021713.2" } ] } }, { "isoform_ac": "I3LQW2-1", "url": "https://www.uniprot.org/uniprotkb/I3LCD8/entry#I3LQW2-1", "sequence": { "sequence": "MARRSRHRLLLLLLRYLVVALDYHKACGFSDPKDHHVVTAIEYQEVILACKYPKKTVSSRLEWKKLGRGISFVYYQQALQGAFKDRAELIDFSIRIKNVTRNDAGKYRCEISAPSEQGQNLAEDTVTLEVLVAPAVPSCEVPSSALSGTTVELRCQDKEGNPAPEYTWFKDGIRLSGNPRLDAQSTNSSYTMNVKSGSLQFNAVSKLDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVAIVISLCGLGVCYAQRKGYFSKLLIAISFP", "length": 277, "header": "tr|I3LQW2-1|I3LCD8_PIG Computationally mapped isoform of Junctional adhesion molecule B OS=Sus scrofa OX=9823 GN=JAM2 PE=1 SV=4 CANONICAL=I3LCD8-1" }, "locus": { "chromosome": "13", "start_pos": 189274443, "end_pos": 189200330, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029574.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029574.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026494.4", "url": "https://www.ensembl.org/id/ENSSSCP00000026494.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9R8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9R8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102166598", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102166598", "resource": "KEGG Pathway" }, { "id": "R-SSC-202733", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-202733", "resource": "Reactome", "description": "Cell surface interactions at the vascular wall" }, { "id": "R-SSC-216083", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-216083", "resource": "Reactome", "description": "Integrin cell surface interactions" } ], "orthologs": [ { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSRLEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGIIAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII", "length": 298 }, "evidence": [ { "id": "I3LCD8", "url": "https://omabrowser.org/oma/group/I3LCD8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "hematopoietic stem cell migration to bone marrow", "id": "GO:0097241", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097241", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "leukocyte tethering or rolling", "id": "GO:0050901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050901", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "positive regulation of lymphocyte migration", "id": "GO:2000403", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000403", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "leukocyte cell-cell adhesion", "id": "GO:0007159", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007159", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "lymphocyte aggregation", "id": "GO:0071593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071593", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "bicellular tight junction", "id": "GO:0005923", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005923", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "cell-cell contact zone", "id": "GO:0044291", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044291", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "protein complex involved in cell adhesion", "id": "GO:0098636", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098636", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" }, { "name": "tight junction", "id": "GO:0070160", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070160", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "integrin binding", "id": "GO:0005178", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005178", "evidence": [ { "database": "UniProtKB", "id": "I3LCD8", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 187, "end_pos": 189, "annotation": "n_glycosylation_sequon" }, { "start_pos": 236, "end_pos": 238, "annotation": "n_glycosylation_sequon" }, { "start_pos": 98, "end_pos": 100, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LCD8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 298, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LCD8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LCD8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LCD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCD8" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 32, "end_pos": 127, "start_aa": "Pro", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 187, "end_pos": 189 }, { "start_pos": 236, "end_pos": 238 }, { "start_pos": 98, "end_pos": 100 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZSW0-1", "uniprot_ac": "A0A286ZSW0", "uniprot_id": "A0A286ZSW0_PIG", "mass": { "chemical_mass": 88103.0, "monoisotopic_mass": 88103.0 }, "refseq": { "ac": "XP_020920894", "name": "transcription factor SPT20 homolog isoform X8", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920894" }, "gene_names": [ { "name": "SUPT20H", "type": "recommended", "evidence": [ { "id": "A0A286ZSW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0" } ] }, { "name": "SUPT20H", "type": "synonym", "evidence": [ { "id": "XP_020920894", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920894" } ] } ], "protein_names": [ { "name": "SPT20 homolog, SAGA complex component", "type": "synonym", "evidence": [ { "id": "A0A286ZSW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#names_and_taxonomy" } ] }, { "name": "transcription factor SPT20 homolog isoform X8", "type": "synonym", "evidence": [ { "id": "XP_020920894", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920894" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSW0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SUPT20H", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0", "locus": { "chromosome": "11", "start_pos": 12825762, "end_pos": 12864929, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009359", "url": "https://www.ensembl.org/id/ENSSSCG00000009359" } ] } } ], "crossref": [ { "id": "ENSSSCG00000009359", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009359", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100739486", "url": "https://www.ncbi.nlm.nih.gov/gene/100739486", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021950", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021950", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046468", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046468", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "XTTATQV", "url": "https://omabrowser.org/oma/group/XTTATQV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13526", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13526", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13526:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13526:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12090", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12090", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020920894", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920894", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZJT3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJT3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJT3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJT3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSW0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSW0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADP2", "url": "https://www.uniprot.org/uniprotkb/A0A287ADP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ADP2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJF1", "url": "https://www.uniprot.org/uniprotkb/A0A287AJF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AJF1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0WKC0", "url": "https://www.uniprot.org/uniprotkb/A0A8D0WKC0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0WKC0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0WKC0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1Y8S8", "url": "https://www.uniprot.org/uniprotkb/A0A8D1Y8S8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1Y8S8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1Y8S8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG33", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG33-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG33-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGNYFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRSGTPKPSTPTPTPSSTPHPPDAQSSTPITPSATPTPQDSGFTPQPTLLTQFAQQQKSLSQAMPVTTIPLSTMVTSITTGTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAAVAILAASNGYGSSSSTNSSATSASAYRQPVKK", "length": 811, "header": "tr|A0A286ZSW0-1|A0A286ZSW0_PIG Isoform 1 of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=1 CANONICAL=A0A286ZSW0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJT3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#A0A286ZJT3-1", "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGNYFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAAVAILAASNGYGSSSSTNSSATSASAYRQPVKK", "length": 685, "header": "tr|A0A286ZJT3-1|A0A286ZSW0_PIG Computationally mapped isoform of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=2 CANONICAL=A0A286ZSW0-1" }, "locus": { "chromosome": "11", "start_pos": 12862200, "end_pos": 12826142, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053123.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053123.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031720.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031720.2" } ] } }, { "isoform_ac": "A0A286ZSW0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#A0A286ZSW0-1", "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGNYFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRSGTPKPSTPTPTPSSTPHPPDAQSSTPITPSATPTPQDSGFTPQPTLLTQFAQQQKSLSQAMPVTTIPLSTMVTSITTGTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAAVAILAASNGYGSSSSTNSSATSASAYRQPVKK", "length": 811, "header": "tr|A0A286ZSW0-1|A0A286ZSW0_PIG Isoform 1 of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=1 CANONICAL=A0A286ZSW0-1" }, "locus": { "chromosome": "11", "start_pos": 12862200, "end_pos": 12826142, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052734.1", "url": "https://www.ensembl.org/id/ENSSSCT00000052734.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034551.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034551.1" } ] } }, { "isoform_ac": "A0A287ADP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#A0A287ADP2-1", "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGSGTPKPSTPTPTPSSTPHPPDAQSSTPITPSATPTPQDSGFTPQPTLLTQFAQQQKSLSQAMPVTTIPLSTMVTSITTGTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAVLSQLGSAENRPEQSLPQQRFQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHRHRHTGSQSKSKMKRGTPATPKF", "length": 804, "header": "tr|A0A287ADP2-1|A0A287ADP2_PIG Computationally mapped isoform of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=2 CANONICAL=A0A286ZSW0-1" }, "locus": { "chromosome": "11", "start_pos": 12862200, "end_pos": 12826105, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040086.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040086.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042095.3", "url": "https://www.ensembl.org/id/ENSSSCP00000042095.3" } ] } }, { "isoform_ac": "A0A287AJF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#A0A287AJF1-1", "sequence": { "sequence": "MYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGNYFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAVLSQLGSAENRPEQSLPQQRFQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHRHRHTGSQSKSKMKRGTPATPKF", "length": 767, "header": "tr|A0A287AJF1-1|A0A287AJF1_PIG Computationally mapped isoform of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=1 CANONICAL=A0A286ZSW0-1" }, "locus": { "chromosome": "11", "start_pos": 12862200, "end_pos": 12826105, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037044.2", "url": "https://www.ensembl.org/id/ENSSSCT00000037044.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044014.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044014.2" } ] } }, { "isoform_ac": "A0A8D0WKC0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#A0A8D0WKC0-1", "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGNYFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQQLRFLQHQMAMAAAAAQTAQLHRHRHTGSQSKSKMKRGTPATPKF", "length": 709, "header": "tr|A0A8D0WKC0-1|A0A286ZSW0_PIG Computationally mapped isoform of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=1 CANONICAL=A0A286ZSW0-1" }, "locus": { "chromosome": "11", "start_pos": 12862200, "end_pos": 12826105, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010256.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010256.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009989.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009989.4" } ] } }, { "isoform_ac": "A0A8D1Y8S8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#A0A8D1Y8S8-1", "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSQFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGNYFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAAVAILAASNGYGSSSSTNSSATSASAYRQPVKK", "length": 723, "header": "tr|A0A8D1Y8S8-1|A0A286ZSW0_PIG Computationally mapped isoform of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=1 CANONICAL=A0A286ZSW0-1" }, "locus": { "chromosome": "11", "start_pos": 12862200, "end_pos": 12826142, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060979.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060979.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035347.3", "url": "https://www.ensembl.org/id/ENSSSCP00000035347.3" } ] } }, { "isoform_ac": "A0A8W4FG33-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0/entry#A0A8W4FG33-1", "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLGDPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGNYFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGINLSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAVLSQLGSAENRPEQSLPQQRFQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHRHRHTGSQSKSKMKRGTPATPKF", "length": 779, "header": "tr|A0A8W4FG33-1|A0A8W4FG33_PIG Computationally mapped isoform of SPT20 homolog, SAGA complex component OS=Sus scrofa OX=9823 GN=SUPT20H PE=3 SV=1 CANONICAL=A0A286ZSW0-1" }, "locus": { "chromosome": "11", "start_pos": 12862200, "end_pos": 12826105, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095518.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095518.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078277.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078277.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 494, "start_aa": "Thr", "end_pos": 494, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr494", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 541, "start_aa": "Thr", "end_pos": 541, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr541", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 543, "start_aa": "Thr", "end_pos": 543, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr543", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 560, "start_aa": "Thr", "end_pos": 560, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr560", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 654, "start_aa": "Thr", "end_pos": 654, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr654", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0WKC0", "url": "https://www.uniprot.org/uniprotkb/A0A8D0WKC0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q66HC7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "Supt20h", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQQALEQALDRAEYIVESAQQRPPKRKCLSSGRKSIFQKLYDLYVEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLVCDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSVAVACTANRLLYNRQKMNTRPMKRCLKRYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLAVPSEVDVEKYAKVEKSIKSDDSQPTMWPAHDVKDDYVFECEGGNQYQKTKLTILQSLGDPLYYGKIQPWKADEESDSQMSPSHSSADDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLNSGEEGEPETSSIQSSVLGKGVKHRPPPIKLPSSSGNSSSGNYFTAQQASSFLKSPTPPPPSSKPSLSRKSSVDLSQVSMLSPAALSPASSSQRHES", "length": 530 }, "evidence": [ { "id": "A0A286ZSW0", "url": "https://omabrowser.org/oma/group/A0A286ZSW0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TT00-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "Supt20h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQQAVEQALDCAEYIVESAQQRPPKRKYLSSGRKSIFQKLYDLYVEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLVCDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSVAVACTANRLLYNRQKMNTRPMKRCWKRYSRSSLNRQQDLSHGPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLAVPSEVDVEKYAKVEESIKSDDSQPTMWPAHDVKDDYVFECEGGNQYQKTKLTILQSLGDPLYYGKIQPWKADEENDSQMSPSHSSADDHSNWFVIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSAALSPGEEAEQAETSSIQSSVLGKGVKHRPPPIKLPSGSGNSSSGNYFTAQQASSFLKSPTPPPSCKPSLSRKSSVDLSQVSMLSPAALSPASSSQRHES", "length": 530 }, "evidence": [ { "id": "A0A286ZSW0", "url": "https://omabrowser.org/oma/group/A0A286ZSW0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGDPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNYFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQRFQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF", "length": 779 }, "evidence": [ { "id": "A0A286ZSW0", "url": "https://omabrowser.org/oma/group/A0A286ZSW0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSW0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "SAGA complex", "id": "GO:0000124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000124", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSW0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSW0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSW0" } ], "pmid": "" } ] } ] }, 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"eco_id": "ECO_0000259", "start_pos": 75, "end_pos": 216, "start_aa": "Cys", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 494, 541, 543, 560, 654 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 299, "end_pos": 301 }, { "start_pos": 474, "end_pos": 476 }, { "start_pos": 659, "end_pos": 661 }, { "start_pos": 692, "end_pos": 694 }, { "start_pos": 796, "end_pos": 798 }, { "start_pos": 95, "end_pos": 97 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 5 }, { "field": "total_sites", "count": 5 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 5 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZSD4-1", "uniprot_ac": "A0A286ZSD4", "uniprot_id": "A0A286ZSD4_PIG", "mass": { "chemical_mass": 55636.0, "monoisotopic_mass": 55636.0 }, "refseq": { "ac": "XP_020931384", "name": "raftlin-2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931384" }, "gene_names": [ { "name": "RFTN2", "type": "recommended", "evidence": [ { "id": "A0A286ZSD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4" } ] }, { "name": "RFTN2", "type": "synonym", "evidence": [ { "id": "XP_020931384", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931384" } ] } ], "protein_names": [ { "name": "Raftlin family member 2", "type": "synonym", "evidence": [ { "id": "A0A286ZSD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4/entry#names_and_taxonomy" } ] }, { "name": "raftlin-2", "type": "synonym", "evidence": [ { "id": "XP_020931384", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931384" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSD4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RFTN2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4", "locus": { "chromosome": "15", "start_pos": 101433845, "end_pos": 101500880, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000037483", "url": "https://www.ensembl.org/id/ENSSSCG00000037483" } ] } } ], "crossref": [ { "id": "ENSSSCG00000037483", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000037483", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100739471", "url": "https://www.ncbi.nlm.nih.gov/gene/100739471", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR028169", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028169", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100739471", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739471", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SWTYQEG", "url": "https://omabrowser.org/oma/group/SWTYQEG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZSD4", "url": "https://www.orthodb.org/?gene=A0A286ZSD4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR17601", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17601", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR17601:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17601:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15250", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15250", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020931384", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931384", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZK99", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZK99-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSD4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSD4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKAEFAYEYVLLDFTLQASPHPAVIKINSIPDIVTKVEDYYLKGYIVGAIHPVIQPMGQQKHLPASYLYRVVLSRLKLSTKHSTAPSGQRRPRLVIEECPLTYETQTNDSAKELIEKINIAAKKGMKFVGFISQHCPPLKFCNGTNHDGDIESALHVRHSSEENCKSWNEGTFSGQSSESGIEEELHHESGQCQMELDGSPSFSKSRKEEDNKLYTVFNVFDDESTCWTYQEGILSMKVTRKGSVVSTLDADWLELTTFYYKQGLSLIDSFVCWETSKGDPSPKSLEGFFIYEEEGSGVPGSSRKGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVMWNSAAQTPERRGSRHVKGEDRSKVTSRSIGLDTALSHSAESRSPAEGRLLSPSRECWMKEKRPAQPSGFSGLSSSDSVLRELDDGQFDQEDGVTQVTCM", "length": 499, "header": "tr|A0A286ZSD4-1|A0A286ZSD4_PIG Isoform 1 of Raftlin family member 2 OS=Sus scrofa OX=9823 GN=RFTN2 PE=3 SV=2 CANONICAL=A0A286ZSD4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZK99-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4/entry#A0A286ZK99-1", "sequence": { "sequence": "MDRSLLLLSLDSNVFFLNIYDLAEKIKAVKSAMGCGLRKLEDPDDSSPGKIFSTLKRPQVETKAEFAYEYVLLDFTLQASPHPAVIKINSIPDIVTKVEDYYLKGYIVGAIHPVIQPMGQQKHLPASYLYRVVLSRLKLSTKHSTAPSGQRRPRLVIEECPLTYETQTNDSAKELIEKINIAAKKGMKFVGFISQHCPPLKFCNGTNHDGDIESALHVRHSSEENCKSWNEGTFSGQSSESGIEEELHHESGQCQMELDGSPSFSKSRKEEDNKLYTVFNVFDDESTCWTYQEGILSMKVTRKGSVVSTLDADWLELTTFYYKQGLSLIDSFVCWETSKGDPSPKSLEGFFIYEEEGSGVPGSSRKGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVMWNSAAQTPERRGSRHVKGEDRSKVTSRSIGLDTALSHSAESRSPAEGRLLSPSRECWMKEKRPAQPSGFSGLSSSDSVLRELDDGQFDQEDGVTQVTCM", "length": 531, "header": "tr|A0A286ZK99-1|A0A286ZSD4_PIG Computationally mapped isoform of Raftlin family member 2 OS=Sus scrofa OX=9823 GN=RFTN2 PE=3 SV=3 CANONICAL=A0A286ZSD4-1" }, "locus": { "chromosome": "15", "start_pos": 101500479, "end_pos": 101434965, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042848.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042848.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031987.3", "url": "https://www.ensembl.org/id/ENSSSCP00000031987.3" } ] } }, { "isoform_ac": "A0A286ZSD4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4/entry#A0A286ZSD4-1", "sequence": { "sequence": "MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKAEFAYEYVLLDFTLQASPHPAVIKINSIPDIVTKVEDYYLKGYIVGAIHPVIQPMGQQKHLPASYLYRVVLSRLKLSTKHSTAPSGQRRPRLVIEECPLTYETQTNDSAKELIEKINIAAKKGMKFVGFISQHCPPLKFCNGTNHDGDIESALHVRHSSEENCKSWNEGTFSGQSSESGIEEELHHESGQCQMELDGSPSFSKSRKEEDNKLYTVFNVFDDESTCWTYQEGILSMKVTRKGSVVSTLDADWLELTTFYYKQGLSLIDSFVCWETSKGDPSPKSLEGFFIYEEEGSGVPGSSRKGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVMWNSAAQTPERRGSRHVKGEDRSKVTSRSIGLDTALSHSAESRSPAEGRLLSPSRECWMKEKRPAQPSGFSGLSSSDSVLRELDDGQFDQEDGVTQVTCM", "length": 499, "header": "tr|A0A286ZSD4-1|A0A286ZSD4_PIG Isoform 1 of Raftlin family member 2 OS=Sus scrofa OX=9823 GN=RFTN2 PE=3 SV=2 CANONICAL=A0A286ZSD4-1" }, "locus": { "chromosome": "15", "start_pos": 101500302, "end_pos": 101434965, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053141.2", "url": "https://www.ensembl.org/id/ENSSSCT00000053141.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034375.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034375.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZK99", "url": "https://www.uniprot.org/uniprotkb/A0A286ZK99" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739471", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739471", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YRE1-1", "protein_name": "Raftlin family member 2", "gene_name": "RFTN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSVLLFSVSQNGLYFTMGCGLRKLEDPDDSSPGKIFSTLKRPQVETKADSAYEYILLDFTLEASSNPEVIKIGSVLDIASKVEEYYSKGYVVGAVHPILLPIGHRRNFPASHMYRVVLSRLKLSQKHAAPRGQRNPRLVIEECPVTYDTLTNEVVKELLEKVNEAAKRGKKFVGFVTQHFPQIKACNGASTDGSAELELTLGGRNREHRRISSDDDYKNWNERSLCDNLSESGNEEEMQADSGLLQDADFQFGKEVSPIKPRKGNDKLYTVFNVFDDDSTCWTYHEGALSMKVTRKGPVINTLEADWLELTTFYYKQGLSLIDSFVHWEISKGDHLPRSLEGLFIYEEEGSGVPGSNRKGNDAIVVEQWTVIEGCEVKTDYGPLLNTLAEFGWLLTCVLPTPIVRHDSEGNLATKQVVFLQRPVVWNPAVQTPEKKSLRQVTGEEKGKAASRSVGLDAGTSHPVEIGQPPDEFHLSPSKQCCIKEASSQYGGFSGFGSSDGVLRELDDGQFDQEDGVTQVTCM", "length": 523 }, "evidence": [ { "id": "A0A286ZSD4", "url": "https://omabrowser.org/oma/group/A0A286ZSD4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0LKZ9-1", "protein_name": "Raftlin family member 2", "gene_name": "Rftn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGCGLRKLEDPDESSPGKIFSTLKRPQVETKTEFAYEYALLDFTLQASTNPEVIKINSVLDIVAKVEDYYLKGYVVGAIHPVIQPVGQRKHLPASHLYRAVLSRVKLSSKHSAAGGQRRARLVIEECPLTCETQGNDSAKELIDKVNAAAKRGMRFVGFVPQHCSPSKHCNGASQDGVAESELHKRQGSQDNCKSLNDGTLWESGVEEEPQPESGQHQTEGNSSLSYSNPKRGEAPDNKVYMVFNAFEEDSACWTYQEGILSMKVTRKGAVISTLDANWLELTTFYYKQGLSLVDSFVCWETPKGDQLPKSLEGFFIYEEEGSGVPGSNRRGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVTWNSAAQTPERKGGRLLRGEDRNKVGSRSIGLDTSECQPAGGRAPLEEGPLSPSRECWTKEERPTQSDSFSGFSGSDSVLRELDDGQFDQEEGVTQVTCIYGTSPQWLIC", "length": 506 }, "evidence": [ { "id": "A0A286ZSD4", "url": "https://omabrowser.org/oma/group/A0A286ZSD4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HL11-1", "protein_name": "Raftlin-2 isoform X1", "gene_name": "Rftn2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGCGLRKLEDSDDSSPGKIFSTLKRPQVETKTEFAYEYALLDFTLQASTNPEVIKINSVLDIVAKVEEYYLKGYVVGAIHPVIQPVRHRKHLPASHLYRVVLSRLKVSPKHSAVPVGQRHARLVMEECPLTYETQTNDAAKELIEKINAAAKRGMKFVGFVSQYYLPSKHCNGTSHDGDAELGLHRRHGSHDNCKSGNEGDISGQLCESGMEEEPQLESGHQTEGNSSPSYSKPDRGGDHKLYMVFNAFGEDSACWTYQEGILSMKVTRKGAVINTLDANWLELTTFYYKQGLSLVDSFVCWETPKAGDHLPKSLEGFFIYEEEGSGVPGSSRKGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPIVWSSAAQTPERKTSRLLKGEDRNKVGSRSIGLDTSASQPAQGRGPLEEGPLCPSRECWTKEERPAQSDSFLGFSSSHSALRELDDGQFDQEEGVTQVTCM", "length": 499 }, "evidence": [ { "id": "A0A286ZSD4", "url": "https://omabrowser.org/oma/group/A0A286ZSD4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q52LD8-1", "protein_name": "Raftlin-2", "gene_name": "RFTN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKTEFAYEYVLLDFTLQASSNPEVIKINSILDIVTKVENYYLKGYIVGAIHPVIQPVGQRKHLPASYLYRVVLLRLKLSPKNSAAPSGQRRPRLVIEECPLTSEAQTNDAAKELIEKINVAAKRGMKFVGFISQHYSPSKFCNGTNHDGDIESMLHVRHGSDENCRSWNEGTLSGQSSESGIEEELHHESGQYQMEQNGSPTSSKSRKGEASDNKLYTVFNAFDDDSTSWAYQEGILSMKVTRKGSVISTLDADWLELTTFYYKQGLSLIDSFVFWETSKGEHLPKSLEGFFIYEEEGSGVPGSSRKGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPVLRHDSEGNLATKQIVFLQRPVMWNSAAQTPDKKASRHIKGEDKNKATSRSIGLDTTSSQPAESRHLPEECRLSPSRECWTKEGRLAQHNSFSGFSSSDNVLRELDDGQFDQEDGVTQVTCM", "length": 501 }, "evidence": [ { "id": "A0A286ZSD4", "url": "https://omabrowser.org/oma/group/A0A286ZSD4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CHX7-1", "protein_name": "Raftlin-2", "gene_name": "Rftn2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGCGLRKLEDPDESSPGKIFSTLKRPQVETKTEFAYEYALLDFTLQASTNPDVIKINSVLDIVAKVEDYYLKGYVVGAIHPVIQPVGQRKHLPASHLYRAVLSRLKLSPKHSAAGGQRRARLVMEECPLTCEAQANDAAKELMDKINAAAKRGMKFVGLVSQCYLPSMHCNGASHDGVAESGLHVRQDSQDNCKGWNEGALGGHLSESGVEEEPQHESGQHQTERNSSPSYANPKRGEAPDGKLYMVFNAFEEDAASWAYQEGVLSMKVTRKGAVISALDANWLELTTFYYKQGFSLIDSFVCWETPKGDQLPKSLEGFFIYEEEGSGVPGSNRRGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVTWNSAAQTPERKGSRLLKGEDRNKVSSRSLGLDTNASQAAGGRAPLEEGSLSPSRECWTKEERPAQSDSFSGFSSSDSVLRELDDGQFDQEEGVTQVTCM", "length": 500 }, "evidence": [ { "id": "A0A286ZSD4", "url": "https://omabrowser.org/oma/group/A0A286ZSD4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSD4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSD4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 137, "end_pos": 139, "annotation": "n_glycosylation_sequon" }, { "start_pos": 172, "end_pos": 174, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 137, "end_pos": 139 }, { "start_pos": 172, "end_pos": 174 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LG80-1", "uniprot_ac": "I3LG80", "uniprot_id": "I3LG80_PIG", "mass": { "chemical_mass": 120610.0, "monoisotopic_mass": 120610.0 }, "refseq": { "ac": "XP_020918982", "name": "zinc finger protein basonuclin-2 isoform X5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918982" }, "gene_names": [ { "name": "BNC2", "type": "recommended", "evidence": [ { "id": "I3LG80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ] }, { "name": "BNC2", "type": "synonym", "evidence": [ { "id": "XP_020918982", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918982" } ] } ], "protein_names": [ { "name": "Basonuclin zinc finger protein 2", "type": "synonym", "evidence": [ { "id": "I3LG80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG80/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein basonuclin-2 isoform X5", "type": "synonym", "evidence": [ { "id": "XP_020918982", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918982" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BNC2", "url": "https://www.uniprot.org/uniprotkb/I3LG80", "locus": { "chromosome": "1", "start_pos": 206372121, "end_pos": 205925091, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005180", "url": "https://www.ensembl.org/id/ENSSSCG00000005180" } ] } } ], "crossref": [ { "id": "I3LG80", "url": "https://alphafold.ebi.ac.uk/entry/I3LG80", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005180", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005180", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513064", "url": "https://www.ncbi.nlm.nih.gov/gene/100513064", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040436", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040436", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15021", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15021", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15021:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15021:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12874", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12874", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020918982", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918982", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKR2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKR2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKR2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKR2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W5V8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5V8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W5V8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5V8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0YJD0", "url": "https://www.uniprot.org/uniprotkb/A0A8D0YJD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0YJD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0YJD0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG80-1", "url": "https://www.uniprot.org/uniprotkb/I3LG80-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEEAEVDVRERETQRDREPKRARDLTLRDSCTDNSMQFGTRTTTAEPGFMGTWQNADTNLLFRMSQQVPVACAGRVLGADFCPNLEEPDQRLEVQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHLYHPTQVEIVQSNVVFDISSLMLYGTQAVPVRLKILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWAIMSREEEIITLQQFLRFGETKSIVELMAIQEKEGQAVAVPSSKTDSDIRTFIESNNRTRSPSLLAHLENSNPSSIHHFENIPNSLAFLLPFQYINPVSAPLLGLPPNGLLLEQPGLRLREPSLSTQNEYNESSESEVSPTPYKNDQPPNRNALTSITNVEPKTEPACVSPIQNSAPVSDLTKTEHPKSSFRIHRMRRMGSASRKGRVFCNACGKTFYDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDLIRATSGAATPVIASTKSNLTLTSPGRPPMGFTTPPLDPVLQNPLPSQLVFSGLKTVQPVPPFYRSLLTPGEMVSPPTSLPTSPIIPTSGTIEQHPPPPSEPAAPVVMMATHEPSTDLAPKKKPRKSSMPVKIEKEIIDTADEFDDEDDDPNDGGAVVNDVSHDNHCHSQEEMSPGMSVKDFSKHSRSRCISRTEIRRADSMTSEDQEVERDYENESESSEPKLGEESMEGDEHMHGEVSEKVLMNSERPDENHSEPSHQDVIKVKEEFTDPTYDMFYMSQYGLYNGGGASMAALHESFASSLNYGSPQKFSPEGDLCSSPDPKICYVCKKSFKSSYSVKLHYRNVHLKEMHVCTVAGCNAAFPSRRSRDRHSANINLHRKLLTKELDDMGLDASQPSLSKDLRDEFLMKIYGAQHPLGLDVREDASSPAGTEDSHLNGYGRGMAEDYMVLDLSTTSSLQSSSSIHSSRESDAGSDEGILLDDLDGASDSGESAHKAEVPTLPGSLGADVAGSLMFNSLSGSNGGIMCNICHKMYSNKGTLRVHYKTVHLREMHKCKVPGCNMMFSSVRSRNRHSQNPNLHKNIPFTSVD", "length": 1085, "header": "tr|I3LG80-1|I3LG80_PIG Isoform 1 of Basonuclin zinc finger protein 2 OS=Sus scrofa OX=9823 GN=BNC2 PE=4 SV=3 CANONICAL=I3LG80-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKR2-1", "url": "https://www.uniprot.org/uniprotkb/I3LG80/entry#A0A286ZKR2-1", "sequence": { "sequence": "MSEEAEVDVRERETQRDREPKRARDLTLRDSCTDNSMQFGTRTTTAEPGFMGTWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHLYHPTQVEIVQSNVVFDISSLMLYGTQAVPVRLKILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWAIMSREEEIITLQQFLRFGETKSIVELMAIQEKEGQAVAVPSSKTDSDIRTFIESNNRTRSPSLLAHLENSNPSSIHHFENIPNSLAFLLPFQYINPVSAPLLGLPPNGLLLEQPGLRLREPSLSTQNEYNESSESEVSPTPYKNDQPPNRNALTSITNVEPKTEPACVSPIQNSAPVSDLTKTEHPKSSFRIHRMRRMGSASRKGRVFCNACGKTFYDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDLIRATSGAATPVIASTKSNLTLTSPGRPPMGFTTPPLDPVLQNPLPSQLVFSGLKTVQPVPPFYRSLLTPGEMVSPPTSLPTSPIIPTSGTIEQHPPPPSEPAAPVVMMATHEPSTDLAPKKKPRKSSMPVKIEKEIIDTADEFDDEDDDPNDGGAVVNDVSHDNHCHSQEEMSPGMSVKDFSKHSRSRCISRTEIRRADSMTSEDQEVERDYENESESSEPKLGEESMEGDEHMHGEVSEKVLMNSERPDENHSEPSHQDVIKVKEEFTDPTYDMFYMSQYGLYNGGGASMAALHESFASSLNYGSPQKFSPEGDLCSSPDPKICYVCKKSFKSSYSVKLHYRNVHLKEMHVCTVAGCNAAFPSRRSRDRNRNVRMERTIGPGHRDSLHLHTVPT", "length": 863, "header": "tr|A0A286ZKR2-1|I3LG80_PIG Computationally mapped isoform of Basonuclin zinc finger protein 2 OS=Sus scrofa OX=9823 GN=BNC2 PE=4 SV=2 CANONICAL=I3LG80-1" }, "locus": { "chromosome": "1", "start_pos": 206371071, "end_pos": 205925186, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044003.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044003.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032059.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032059.2" } ] } }, { "isoform_ac": "A0A4X1W5V8-1", "url": "https://www.uniprot.org/uniprotkb/I3LG80/entry#A0A4X1W5V8-1", "sequence": { "sequence": "MVPVACAGRVLGADFCPNLEEPDQRLEVQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHLYHPTQVEIVQSNVVFDISSLMLYGTQAVPVRLKILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWAIMSREEEIITLQQFLRFGETKSIVELMAIQEKEGQAVAVPSSKTDSDIRTFIESNNRTRSPSLLAHLENSNPSSIHHFENIPNSLAFLLPFQYINPVSAPLLGLPPNGLLLEQPGLRLREPSLSTQNEYNESSESEVSPTPYKNDQPPNRNALTSITNVEPKTEPACVSPIQNSAPVSDLTKTEHPKSSFRIHRMRRMGSASRKGRVFCNACGKTFYDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDLIRATSGAATPVIASTKSNLTLTSPGRPPMGFTTPPLDPVLQNPLPSQLVFSGLKTVQPVPPFYRSLLTPGEMVSPPTSLPTSPIIPTSGTIEQHPPPPSEPAAPVVMMATHEPSTDLAPKKKPRKSSMPVKIEKEIIDTADEFDDEDDDPNDGGAVVNDVSHDNHCHSQEEMSPGMSVKDFSKHSRSRCISRTEIRRADSMTSEDQEVERDYENESESSEPKLGEESMEGDEHMHGEVSEKVLMNSERPDENHSEPSHQDVIKVKEEFTDPTYDMFYMSQYGLYNGGGASMAALHESFASSLNYGSPQKFSPEGDLCSSPDPKICYVCKKSFKSSYSVKLHYRNVHLKEMHVCTVAGCNAAFPSRRSRDRHSANINLHRKLLTKELDDMGLDASQPSLSKDLRDEFLMKIYGAQHPLGLDVREDASSPAGTEDSHLNGYGRGMAEDYMVLDLSTTSSLQSSSSIHSSRESDAGSDEGILLDDLDGASDSGESAHKAEVPTLPGSLGADVAGSLMFNSLSGSNGGIMCNICHKMYSNKGTLRVHYKTVHLREMHKCKVPGCNMMFSSVRSRNRHSQNPNLHKNIPFTSVD", "length": 1018, "header": "tr|A0A4X1W5V8-1|I3LG80_PIG Computationally mapped isoform of Basonuclin zinc finger protein 2 OS=Sus scrofa OX=9823 GN=BNC2 PE=4 SV=1 CANONICAL=I3LG80-1" }, "locus": { "chromosome": "1", "start_pos": 206371715, "end_pos": 206091632, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062266.1", "url": "https://www.ensembl.org/id/ENSSSCT00000062266.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052557.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052557.1" } ] } }, { "isoform_ac": "A0A8D0YJD0-1", "url": "https://www.uniprot.org/uniprotkb/I3LG80/entry#A0A8D0YJD0-1", "sequence": { "sequence": "MAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHLYHPTQVEIVQSNVVFDISSLMLYGTQAVPVRLKILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWAIMSREEEIITLQQFLRFGETKSIVELMAIQEKEGQAVAVPSSKTDSDIRTFIESNNRTRSPSLLAHLENSNPSSIHHFENIPNSLAFLLPFQYINPVSAPLLGLPPNGLLLEQPGLRLREPSLSTQNEYNESSESEVSPTPYKNDQPPNRNALTSITNVEPKTEPACVSPIQNSAPVSDLTKTEHPKSSFRIHRMRRMGSASRKGRVFCNACGKTFYDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDLIRATSGAATPVIASTKSNLTLTSPGRPPMGFTTPPLDPVLQNPLPSQLVFSGLKTVQPVPPFYRSLLTPGEMVSPPTSLPTSPIIPTSGTIEQHPPPPSEPAAPVVMMATHEPSTDLAPKKKPRKSSMPVKIEKEIIDTADEFDDEDDDPNDGGAVVNDVSHDNHCHSQEEMSPGMSVKDFSKHSRSRCISRTEIRRADSMTSEDQEVERDYENESESSEPKLGEESMEGDEHMHGEVSEKVLMNSERPDENHSEPSHQDVIKVKEEFTDPTYDMFYMSQYGLYNGGGASMAALHESFASSLNYGSPQKFSPEGDLCSSPDPKICYVCKKSFKSSYSVKLHYRNVHLKEMHVCTVAGCNAAFPSRRSRDRHSANINLHRKLLTKELDDMGLDASQPSLSKDLRDEFLMKIYGAQHPLGLDVREDASSPAGTEDSHLNGYGRGMAEDYMVLDLSTTSSLQSSSSIHSSRESDAGSDEGILLDDLDGASDSGESAHKAEVPTLPGSLGADVAGSLMFNSLSGSNGGIMCNICHKMYSNKGTLRVHYKTVHLREMHKCKVPGCNMMFSSVRSRNRHSQNPNLHKNIPFTSVD", "length": 990, "header": "tr|A0A8D0YJD0-1|I3LG80_PIG Computationally mapped isoform of Basonuclin zinc finger protein 2 OS=Sus scrofa OX=9823 GN=BNC2 PE=4 SV=1 CANONICAL=I3LG80-1" }, "locus": { "chromosome": "1", "start_pos": 206371715, "end_pos": 206091632, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084029.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084029.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070535.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070535.1" } ] } }, { "isoform_ac": "I3LG80-1", "url": "https://www.uniprot.org/uniprotkb/I3LG80/entry#I3LG80-1", "sequence": { "sequence": "MSEEAEVDVRERETQRDREPKRARDLTLRDSCTDNSMQFGTRTTTAEPGFMGTWQNADTNLLFRMSQQVPVACAGRVLGADFCPNLEEPDQRLEVQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHLYHPTQVEIVQSNVVFDISSLMLYGTQAVPVRLKILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWAIMSREEEIITLQQFLRFGETKSIVELMAIQEKEGQAVAVPSSKTDSDIRTFIESNNRTRSPSLLAHLENSNPSSIHHFENIPNSLAFLLPFQYINPVSAPLLGLPPNGLLLEQPGLRLREPSLSTQNEYNESSESEVSPTPYKNDQPPNRNALTSITNVEPKTEPACVSPIQNSAPVSDLTKTEHPKSSFRIHRMRRMGSASRKGRVFCNACGKTFYDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDLIRATSGAATPVIASTKSNLTLTSPGRPPMGFTTPPLDPVLQNPLPSQLVFSGLKTVQPVPPFYRSLLTPGEMVSPPTSLPTSPIIPTSGTIEQHPPPPSEPAAPVVMMATHEPSTDLAPKKKPRKSSMPVKIEKEIIDTADEFDDEDDDPNDGGAVVNDVSHDNHCHSQEEMSPGMSVKDFSKHSRSRCISRTEIRRADSMTSEDQEVERDYENESESSEPKLGEESMEGDEHMHGEVSEKVLMNSERPDENHSEPSHQDVIKVKEEFTDPTYDMFYMSQYGLYNGGGASMAALHESFASSLNYGSPQKFSPEGDLCSSPDPKICYVCKKSFKSSYSVKLHYRNVHLKEMHVCTVAGCNAAFPSRRSRDRHSANINLHRKLLTKELDDMGLDASQPSLSKDLRDEFLMKIYGAQHPLGLDVREDASSPAGTEDSHLNGYGRGMAEDYMVLDLSTTSSLQSSSSIHSSRESDAGSDEGILLDDLDGASDSGESAHKAEVPTLPGSLGADVAGSLMFNSLSGSNGGIMCNICHKMYSNKGTLRVHYKTVHLREMHKCKVPGCNMMFSSVRSRNRHSQNPNLHKNIPFTSVD", "length": 1085, "header": "tr|I3LG80-1|I3LG80_PIG Isoform 1 of Basonuclin zinc finger protein 2 OS=Sus scrofa OX=9823 GN=BNC2 PE=4 SV=3 CANONICAL=I3LG80-1" }, "locus": { "chromosome": "1", "start_pos": 206371715, "end_pos": 205925186, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031467.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031467.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023073.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023073.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W5V8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W5V8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "pmid": "" }, { "name": "rDNA binding", "id": "GO:0000182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000182", "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "pmid": "" }, { "name": "fibrillar center", "id": "GO:0001650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001650", "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "I3LG80", "url": "https://www.uniprot.org/uniprotkb/I3LG80" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 276, "end_pos": 278, "annotation": "n_glycosylation_sequon" }, { "start_pos": 350, "end_pos": 352, "annotation": "n_glycosylation_sequon" }, { "start_pos": 514, "end_pos": 516, "annotation": "n_glycosylation_sequon" }, { "start_pos": 710, "end_pos": 712, "annotation": "n_glycosylation_sequon" }, { "start_pos": 748, "end_pos": 750, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LG80-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1085, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LG80-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LG80" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LG80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG80" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 427, "end_pos": 455, "start_aa": "Val", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LDG4-1", "uniprot_ac": "I3LDG4", "uniprot_id": "I3LDG4_PIG", "mass": { "chemical_mass": 60490.0, "monoisotopic_mass": 60490.0 }, "refseq": {}, "gene_names": [ { "name": "ERMAP", "type": "recommended", "evidence": [ { "id": "I3LDG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDG4" } ] } ], "protein_names": [ { "name": "Erythroblast membrane associated protein", "type": "synonym", "evidence": [ { "id": "I3LDG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDG4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDG4", "url": "https://www.uniprot.org/uniprotkb/I3LDG4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ERMAP", "url": "https://www.uniprot.org/uniprotkb/I3LDG4", "locus": { "chromosome": "6", "start_pos": 168595907, "end_pos": 168621952, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021745", "url": "https://www.ensembl.org/id/ENSSSCG00000021745" } ] } } ], "crossref": [ { "id": "I3LDG4", "url": "https://alphafold.ebi.ac.uk/entry/I3LDG4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021745", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021745", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001870", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001870", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003877", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003877", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003879", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003879", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006574", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006574", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050143", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050143", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053896", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053896", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24100", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24100", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24100:SF46", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24100:SF46", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24103", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24103", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00622", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00622", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13765", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13765", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22705", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22705", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZLU7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLU7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7H1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7H1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7H1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7H1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHR1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHR1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHR1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHR1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDG4", "url": "https://www.uniprot.org/uniprotkb/I3LDG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDG4-1", "url": "https://www.uniprot.org/uniprotkb/I3LDG4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "LVPMKMASSSGSWLSGCLVTLISLQLPSQASGDAGQSRLAPLGGTAELLCPLVLWPATVPVEVRWLRSSAPGHPQRVHLFREGKDLEEGVMPEYKGRTALLRDARDGSVTLEIRDVRLEDRGQYKCQVQIGNLSREGVVTLQVAVLGSEPYIHVQSYDAGWIQLVCKSAGWFPKPWAQWRDPQGKVFPSLWETHSLDEAGLFRTAVSNRVRDSTLGNVSCTIQNVALGQERTTAMVIAAPSPGSFSSSEVALAVILPLLGILIVLGVYFIWKQRRSRGNDVRGKGAQAENLLSDHAKEKGNCFPNLPFLCLSAVAVTLDPDTAHPKLILSGDRRCVKLGDTRQPVLDNPQRFDFVVSILGSEHFTAGCHYWEVSVADKSKWALGVCSESVNRKGKVTASPANGHWLLRQNRQGEYEALTSPPTSFRLKEPPRCVGVFLDYEAGVISFYNVTGRSHIFTFTHSFFGPLRPFFEPCLHDGGKNIAPLVICSELQKLEEPTVPKPEERGRANGDVALVVAPSLLPAQAPELGPLRDVVLAWPSDVTPALQGLSVPSF", "length": 554, "header": "tr|I3LDG4-1|I3LDG4_PIG Isoform 1 of Erythroblast membrane associated protein OS=Sus scrofa OX=9823 GN=ERMAP PE=3 SV=3 CANONICAL=I3LDG4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLU7-1", "url": "https://www.uniprot.org/uniprotkb/I3LDG4/entry#A0A286ZLU7-1", "sequence": { "sequence": "MKMASSSGSWLSGLPFSVHPHLAGDAGQSRLAPLGGTAELLCPLVLWPATVPVEVRWLRSSAPGHPQRVHLFREGKDLEEGVMPEYKGRTALLRDARDGSVTLEIRDVRLEDRGQYKCQVQIGNLSREGVVTLQVAAPSPGSFSSSEVALAVILPLLGILIVLGVYFIWKQRRSRGNDVRENLLSDHAKEKGNCFPNLPFLCLSAVAVTLDPDTAHPKLILSGDRRCVKLGDTRQPVLDNPQRFDFVVSILGSEHFTAGCHYWEVSVADKSKWALGVCSESVNRKGKVTASPANGHWLLRQNRQGEYEALTSPPTSFRLKEPPRCVGVFLDYEAGVISFYNVTGRSHIFTFTHSFFGPLRPFFEPCLHDGGKNIAPLVICSELQKLEEPTVPKPEERGRANGDVALVVAPSLLPAQAPELGPLRDVVLAWPSDVTPALQGLSVPSF", "length": 446, "header": "tr|A0A286ZLU7-1|I3LDG4_PIG Computationally mapped isoform of Erythroblast membrane associated protein OS=Sus scrofa OX=9823 GN=ERMAP PE=3 SV=1 CANONICAL=I3LDG4-1" }, "locus": { "chromosome": "6", "start_pos": 168613821, "end_pos": 168599600, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059947.1", "url": "https://www.ensembl.org/id/ENSSSCT00000059947.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032428.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032428.1" } ] } }, { "isoform_ac": "A0A8W4F7H1-1", "url": "https://www.uniprot.org/uniprotkb/I3LDG4/entry#A0A8W4F7H1-1", "sequence": { "sequence": "MASSSGSWLSGCLVTLISLQLPSQASGDAGQSRLAPLGGTAELLCPLVLWPATVPVEVRWLRSSAPGHPQRVHLFREGKDLEEGVMPEYKGRTALLRDARDGSVTLEIRDVRLEDRGQYKCQVQIGNLSREGVVTLQVAVLGSEPYIHVQSYDAGWIQLVCKSAGWFPKPWAQWRDPQGKVFPSLWETHSLDEAGLFRTAVSNRVRDSTLGNVSCTIQNVALGQERTTAMVIAGKRWARDKALGTSKANTCARGNCTRNFQILKTLRTTHASCFPNLPFLCLSAVAVTLDPDTAHPKLILSGDRRCVKLGDTRQPVLDNPQRFDFVVSILGSEHFTAGCHYWEVSVADKSKWALGVCSESVNRKGKVTASPANGHWLLRQNRQGEYEALTSPPTSFRLKEPPRCVGVFLDYEAGVISFYNVTGRSHIFTFTHSFFGPLRPFFEPCLHDGGKNIAPLVICSELQKLEEPTPGAQGFSLLAQHLTSGPSLLLSPNPGPFVVSSSHLSPRAPV", "length": 510, "header": "tr|A0A8W4F7H1-1|I3LDG4_PIG Computationally mapped isoform of Erythroblast membrane associated protein OS=Sus scrofa OX=9823 GN=ERMAP PE=3 SV=1 CANONICAL=I3LDG4-1" }, "locus": { "chromosome": "6", "start_pos": 168613815, "end_pos": 168599438, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095550.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095550.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075174.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075174.1" } ] } }, { "isoform_ac": "A0A8W4FHR1-1", "url": "https://www.uniprot.org/uniprotkb/I3LDG4/entry#A0A8W4FHR1-1", "sequence": { "sequence": "MASSSGSWLSGCLVTLISLQLPSQASGRRDAGQSRLAPLGGTAELLCPLVLWPATVPVEVRWLRSSAPGHPQRVHLFREGKDLEEGVMPEYKGRTALLRDARDGSVTLEIRDVRLEDRGQYKCQVQIGNLSREGVVTLQVAVLGSEPYIHVQSYDAGWIQLVCKSAGWFPKPWAQWRDPQGKVFPSLWETHSLDEAGLFRTAVSNRVRDSTLGNVSCTIQNVALGQERTTAMVIAGSFSSSEVALAVILPLLGILIVLGVYFIWKQRRSRGNDVRGFPNLPFLCLSAVAVTLDPDTAHPKLILSGDRRCVKLGDTRQPVLDNPQRFDFVVSILGSEHFTAGCHYWEVSVADKSKWALGVCSESVNRKGKVTASPANGHWLLRQNRQGEYEALTSPPTSFRLKEPPRCVGVFLDYEAGVISFYNVTGRSHIFTFTHSFFGPLRPFFEPCLHDGGKNIAPLVICSELQKLEEPTVPKPEERALNPARVLGRTLVPSDPAPPHTTAPLGRVP", "length": 509, "header": "tr|A0A8W4FHR1-1|A0A8W4FHR1_PIG Computationally mapped isoform of Erythroblast membrane associated protein OS=Sus scrofa OX=9823 GN=ERMAP PE=3 SV=1 CANONICAL=I3LDG4-1" }, "locus": { "chromosome": "6", "start_pos": 168613815, "end_pos": 168595910, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094214.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094214.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078416.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078416.1" } ] } }, { "isoform_ac": "I3LDG4-1", "url": "https://www.uniprot.org/uniprotkb/I3LDG4/entry#I3LDG4-1", "sequence": { "sequence": "LVPMKMASSSGSWLSGCLVTLISLQLPSQASGDAGQSRLAPLGGTAELLCPLVLWPATVPVEVRWLRSSAPGHPQRVHLFREGKDLEEGVMPEYKGRTALLRDARDGSVTLEIRDVRLEDRGQYKCQVQIGNLSREGVVTLQVAVLGSEPYIHVQSYDAGWIQLVCKSAGWFPKPWAQWRDPQGKVFPSLWETHSLDEAGLFRTAVSNRVRDSTLGNVSCTIQNVALGQERTTAMVIAAPSPGSFSSSEVALAVILPLLGILIVLGVYFIWKQRRSRGNDVRGKGAQAENLLSDHAKEKGNCFPNLPFLCLSAVAVTLDPDTAHPKLILSGDRRCVKLGDTRQPVLDNPQRFDFVVSILGSEHFTAGCHYWEVSVADKSKWALGVCSESVNRKGKVTASPANGHWLLRQNRQGEYEALTSPPTSFRLKEPPRCVGVFLDYEAGVISFYNVTGRSHIFTFTHSFFGPLRPFFEPCLHDGGKNIAPLVICSELQKLEEPTVPKPEERGRANGDVALVVAPSLLPAQAPELGPLRDVVLAWPSDVTPALQGLSVPSF", "length": 554, "header": "tr|I3LDG4-1|I3LDG4_PIG Isoform 1 of Erythroblast membrane associated protein OS=Sus scrofa OX=9823 GN=ERMAP PE=3 SV=3 CANONICAL=I3LDG4-1" }, "locus": { "chromosome": "6", "start_pos": 168613830, "end_pos": 168599600, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023375.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023375.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022095.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022095.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 543, "start_aa": "Thr", "end_pos": 543, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr543", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F7H1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7H1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LDG4", "url": "https://www.uniprot.org/uniprotkb/I3LDG4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LDG4", "url": "https://www.uniprot.org/uniprotkb/I3LDG4" } ], "pmid": "" }, { "name": "external side of plasma membrane", "id": "GO:0009897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009897", "evidence": [ { "database": "UniProtKB", "id": "I3LDG4", "url": "https://www.uniprot.org/uniprotkb/I3LDG4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "signaling receptor binding", "id": "GO:0005102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005102", "evidence": [ { "database": "UniProtKB", "id": "I3LDG4", "url": "https://www.uniprot.org/uniprotkb/I3LDG4" } ], "pmid": "" } ] }, { "name": "Biological Process", 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"MASTALWAHHWAGLLLSASLLTTWSLPAAAQLTLGDRLPKATRSEKDVILSMLGTPWSCQTHGGCRGSLAKPTIAVSQGTAIEHREGVSFYCDTKDVNITIYWVSNNHPLKFDERMWLSTDRKNLTILTVQREDAGTYQCEVWGVLQVQSSNPTFLIVYYGPDPVEIKLEPGVPNGEAVEVIEGSNLTFSVETLSHPHPDYSWFFSNDSKPITSLSSTTSTFTLHAASKEHEGLYRCLVSNKATNLSRLGALKVRVLERVTKPCITSPNLNLVENASLVVLTCQTSHEGVGVQWFLRGQPLLPSPHLVLSADNRTLVIHGLRRDDVGPYECEVWNWGSGARSDSFRLNISYGPDRADITRGPASEAVSTIKAEFNSSLTLQCRAESQPDAEFHWTLEHSTSVWTGEQLIIEALTWEHQGTYNCVAFNSLTHLASSASVRVRVMGPQLSQSIGAITGITIGSVAVVALATGLACFLYIRYAKGSSRRTTEDLILEARTPTSETTHPAEPGRNWPMPTYANVPNTQEQVRVKKVLTQDPPGEFHEKESSSAVHGGYSRGPRKPQPKLRISVPTLPKGNTESNYEVLVNPEHNLYCHINSSV", "length": 599, "header": "tr|I3LE51-1|I3LE51_PIG Isoform 1 of CEA cell adhesion molecule 20 OS=Sus scrofa OX=9823 GN=CEACAM20 PE=3 SV=3 CANONICAL=I3LE51-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNZ1-1", "url": "https://www.uniprot.org/uniprotkb/I3LE51/entry#A0A286ZNZ1-1", "sequence": { "sequence": "MASTALWAHHWAGLLLSASLLTTWSLPAAAQLTLGDRLPKATRSEKDVILSMLGTPWSCQTHGGCRGSLAKPTIAVSQGTAIEHREGVSFYCDTKDVNITIYWVSNNHPLKFDERMWLSTDRKNLTILTVQREDAGTYQCEVWGVLQVQSSNPTFLIVYYGPDPVEIKLEPGVPNGEAVEVIEGSNLTFSVETLSHPHPDYSWFFSNDSKPITSLSSTTSTFTLHAASKEHEGLYRCLVSNKATNLSRLGALKVRVLERVTKPCITSPNLNLVENASLVVLTCQTSHEGVGVQWFLRGQPLLPSPHLVLSADNRTLVIHGLRRDDVGPYECEVWNWGSGARSDSFRLNISYGPDRADITRGPASEAVSTIKAEFNSSLTLQCRAESQPDAEFHWTLEHSTSVWTGEQLIIEALTWEHQGTYNCVAFNSLTHLASSASVRVRVMGPQLSQSIGAITGITIGSVAVVALATGLACFLYIRYAKGSSRRTTEDLILEARTPTSETTHPAEPGRNWPMPTYANVPNTQEQVRVKKKESSSAVHGGYSRGPRKPQPKLRISVPTLPKGNTESNYEVLVNPEHNLYCHINSSV", "length": 587, "header": "tr|A0A286ZNZ1-1|I3LE51_PIG Computationally mapped isoform of CEA cell adhesion molecule 20 OS=Sus scrofa OX=9823 GN=CEACAM20 PE=3 SV=2 CANONICAL=I3LE51-1" }, "locus": { "chromosome": "6", "start_pos": 51031242, "end_pos": 51012748, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056223.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056223.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033337.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033337.2" } ] } }, { "isoform_ac": "A0A5G2QE09-1", "url": "https://www.uniprot.org/uniprotkb/I3LE51/entry#A0A5G2QE09-1", "sequence": { "sequence": "MASTALWAHHWAGLLLSASLLTTWSLPAAAQLTLGDRLPKATRSEKDVILSMLGTPWSCQTHGGCRGSLAKPTIAVSQGTAIEHREGVSFYCDTKDVNITIYWVSNNHPLKFDERMWLSTDRKNLTILTVQREDAGTYQCEVWGVLQVQSSNPTFLIVYYGPDPVEIKLEPGVPNGEAVEVIEGSNLTFSVETLSHPHPDYSWFFSNDSKPITSLSSTTSTFTLHAASKEHEGLYRCLVSNKATNLSRLGALKVRVLERVTKPCITSPNLNLVENASLVVLTCQTSHEGVGVQWFLRGQPLLPSPHLVLSADNRTLVIHGLRRDDVGPYECEVWNWGSGARSDSFRLNISCPQLSQSIGAITGITIGSVAVVALATGLACFLYIRYAKGSSRRTTEDLILEARTPTSETTHPAEPGRNWPMPTYANVPNTQEQVRVKKKESSSAVHGGYSRGPRKPQPKLRISVPTLPKGNTESNYEVLVNPEHNLYCHINSSV", "length": 494, "header": "tr|A0A5G2QE09-1|I3LE51_PIG Computationally mapped isoform of CEA cell adhesion molecule 20 OS=Sus scrofa OX=9823 GN=CEACAM20 PE=3 SV=1 CANONICAL=I3LE51-1" }, "locus": { "chromosome": "6", "start_pos": 51031242, "end_pos": 51012748, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069212.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069212.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061887.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061887.1" } ] } }, { "isoform_ac": "I3LE51-1", "url": "https://www.uniprot.org/uniprotkb/I3LE51/entry#I3LE51-1", "sequence": { "sequence": "MASTALWAHHWAGLLLSASLLTTWSLPAAAQLTLGDRLPKATRSEKDVILSMLGTPWSCQTHGGCRGSLAKPTIAVSQGTAIEHREGVSFYCDTKDVNITIYWVSNNHPLKFDERMWLSTDRKNLTILTVQREDAGTYQCEVWGVLQVQSSNPTFLIVYYGPDPVEIKLEPGVPNGEAVEVIEGSNLTFSVETLSHPHPDYSWFFSNDSKPITSLSSTTSTFTLHAASKEHEGLYRCLVSNKATNLSRLGALKVRVLERVTKPCITSPNLNLVENASLVVLTCQTSHEGVGVQWFLRGQPLLPSPHLVLSADNRTLVIHGLRRDDVGPYECEVWNWGSGARSDSFRLNISYGPDRADITRGPASEAVSTIKAEFNSSLTLQCRAESQPDAEFHWTLEHSTSVWTGEQLIIEALTWEHQGTYNCVAFNSLTHLASSASVRVRVMGPQLSQSIGAITGITIGSVAVVALATGLACFLYIRYAKGSSRRTTEDLILEARTPTSETTHPAEPGRNWPMPTYANVPNTQEQVRVKKVLTQDPPGEFHEKESSSAVHGGYSRGPRKPQPKLRISVPTLPKGNTESNYEVLVNPEHNLYCHINSSV", "length": 599, "header": "tr|I3LE51-1|I3LE51_PIG Isoform 1 of CEA cell adhesion molecule 20 OS=Sus scrofa OX=9823 GN=CEACAM20 PE=3 SV=3 CANONICAL=I3LE51-1" }, "locus": { "chromosome": "6", "start_pos": 51031242, "end_pos": 51012748, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032319.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032319.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022337.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022337.3" } ] } }, { "isoform_ac": "I3LMX9-1", "url": "https://www.uniprot.org/uniprotkb/I3LE51/entry#I3LMX9-1", "sequence": { "sequence": "MASTALWAHHWAGLLLSASLLTTWSLPAAAQLTLGDRLPKATRSEKDVILSMLGTPWSCQTHGGCRGSLAKPTIAVSQGTAIEHREGVSFYCDTKDVNITIYWVSNNHPLKFDERMWLSTDRKNLTILTVQREDAGTYQCEVWGVLQVQSSNPTFLIVYYGPDPVEIKLEPGVPNGEAVEVIEGSNLTFSVETLSHPHPDYSWFFSNDSKPITSLSSTTSTFTLHAASKEHEGLYRCLVSNKATNLSRLGALKVRVLERVTKPCITSPNLNLVENASLVVLTCQTSHEGVGVQWFLRGQPLLPSPHLVLSADNRTLVIHGLRRDDVGPYECEVWNWGSGARSDSFRLNISYGPDRADITRGPASEAVSTIKAEFNSSLTLQCRAESQPDAEFHWTLEHSTSVWTGEQLIIEALTWEHQGTYNCVAFNSLTHLASSASVRVRVMGPQLSQSIGAITGITIGSVAVVALATGLACFLYIRYAKGSSRRTTEDLILEARTPTSETTHPAEPGRNWPMPTYANVPNTQEQVRVKKVLTQDPPGEFHEKESSSAVHGGYSRGPRKPQPKLRISVPTLPKGNTESNYEVLGIGQ", "length": 588, "header": "tr|I3LMX9-1|I3LE51_PIG Computationally mapped isoform of CEA cell adhesion molecule 20 OS=Sus scrofa OX=9823 GN=CEACAM20 PE=3 SV=3 CANONICAL=I3LE51-1" }, "locus": { "chromosome": "6", "start_pos": 51031242, "end_pos": 51009692, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022828.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022828.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025451.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025451.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE09", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE09" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LE51", "url": "https://www.uniprot.org/uniprotkb/I3LE51" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "I3LE51", "url": "https://www.uniprot.org/uniprotkb/I3LE51" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LE51", "url": "https://www.uniprot.org/uniprotkb/I3LE51" } ], "pmid": "" }, { "name": "regulation of immune system process", "id": "GO:0002682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002682", "evidence": [ { "database": "UniProtKB", "id": "I3LE51", "url": "https://www.uniprot.org/uniprotkb/I3LE51" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein tyrosine kinase binding", "id": "GO:1990782", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990782", "evidence": [ { "database": "UniProtKB", "id": "I3LE51", "url": "https://www.uniprot.org/uniprotkb/I3LE51" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 124, "end_pos": 126, "annotation": "n_glycosylation_sequon" }, { "start_pos": 186, "end_pos": 188, "annotation": "n_glycosylation_sequon" }, { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 245, "end_pos": 247, "annotation": "n_glycosylation_sequon" }, { "start_pos": 275, "end_pos": 277, "annotation": "n_glycosylation_sequon" }, { "start_pos": 313, "end_pos": 315, "annotation": "n_glycosylation_sequon" }, { "start_pos": 348, "end_pos": 350, "annotation": "n_glycosylation_sequon" }, { "start_pos": 375, "end_pos": 377, "annotation": "n_glycosylation_sequon" }, { "start_pos": 596, "end_pos": 598, "annotation": "n_glycosylation_sequon" }, { "start_pos": 98, "end_pos": 100, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LE51-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 599, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LE51-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LE51" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LE51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE51" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 72, "end_pos": 142, "start_aa": "Pro", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 124, "end_pos": 126 }, { "start_pos": 186, "end_pos": 188 }, { "start_pos": 207, "end_pos": 209 }, { "start_pos": 245, "end_pos": 247 }, { "start_pos": 275, "end_pos": 277 }, { "start_pos": 313, "end_pos": 315 }, { "start_pos": 348, "end_pos": 350 }, { "start_pos": 375, "end_pos": 377 }, { "start_pos": 596, "end_pos": 598 }, { "start_pos": 98, "end_pos": 100 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007319", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007319", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR059156", "url": "https://www.ebi.ac.uk/interpro/entry/IPR059156", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR059157", "url": "https://www.ebi.ac.uk/interpro/entry/IPR059157", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR22840", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22840", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22840:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22840:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04192", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04192", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25171", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25171", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6791226", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6791226", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZRP6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRP6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSG4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSG4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U0F9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U0F9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U0F9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U0F9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MERGAGDRTASALFAGFRALGLFSNDIPHVQKLSLVAVSNSLPQDICCMAADGRLVFAAYGNVFSAFARNKEVVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWHIYSEEEYLQLSFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNKLLYTFAGWKTGVTALQQAPAVDVVAVGLMSGQVIIHNIKFDETLMKFRQDWGPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKIRYYGQNGQQILSASQDGTLQSFSTIHEKFNKSLGHGLINKKRVKRKGLQNAMTVRLPPITEFAAEEARESDWDGIIACHQGKLSCSTWNYQRSTIGAYFLKPKELKKDDITATAVDITSCGNFAVIGLSSGTIDVYNMQSGIHRGSFGKDQAHKGSIRGVAVDGLNQLTISAGSEGLLKFWNFKNKILIHSVSLDSSPNMMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISASMDCSIRTWDLPSGCLIDSFLLDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYSVVSLRPLPTDYVPSVVMLPGTCQTQDIELSEETTEPSDEMIAYDSPEQLNEQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYATPEQNNDPQQSKVVNLGILAQKSDFCLKLEEGLVNNKYEAALSLLKELGPSGIETELRSLSPDCGGSIEVMKSFLKMIEMMLDRKRDFELAQAYLALFLKLHLKMLPSEPVLLEEVTKLSSQLEETWIHLQSLFNQSMCVLNYIKSALL", "length": 870, "header": "tr|A0A286ZSG4-1|A0A286ZSG4_PIG Isoform 1 of WD repeat domain 36 OS=Sus scrofa OX=9823 GN=WDR36 PE=4 SV=1 CANONICAL=A0A286ZSG4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSG4/entry#A0A286ZRP6-1", "sequence": { "sequence": 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OX=9823 GN=WDR36 PE=4 SV=2 CANONICAL=A0A286ZSG4-1" }, "locus": { "chromosome": "2", "start_pos": 115904556, "end_pos": 115862067, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051417.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051417.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034133.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034133.2" } ] } }, { "isoform_ac": "A0A286ZSG4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSG4/entry#A0A286ZSG4-1", "sequence": { "sequence": 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"type": "synonym", "evidence": [ { "id": "XP_003125416", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125416" } ] } ], "function": [ { "annotation": "Acts to repress the ubiquitination and subsequent endoplasmic reticulum-associated degradation of CHRNA3 by the STUB1-VCP-UBXN2A complex in cortical neurons. Also acts to promote the translocation of CHRNA3 to the plasma membrane and subsequently increases plasma membrane acetylcholine-gated ion-channel activation. Plays a role in the inhibition of STUB1-mediated TP53 degradation, via its interaction with HSPA9 which acts to inhibit TP53 binding to HSPA9. Positively mediates the ubiquitination and proteosomal degradation of RICTOR, may thereby act as a negative regulator of the mTORC2 pathway.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QET3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QET3#function" }, { "database": "UniProtKB", "id": "ARBA00053310", "url": "https://www.uniprot.org/uniprotkb/ARBA00053310#function" }, { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UBXN2A", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5", "locus": { "chromosome": "3", "start_pos": 114673035, "end_pos": 114714178, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000033753", "url": "https://www.ensembl.org/id/ENSSSCG00000033753" } ] } } ], "crossref": [ { "id": "ENSSSCG00000033753", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033753", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100522609", "url": "https://www.ncbi.nlm.nih.gov/gene/100522609", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001012", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001012", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036241", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036241", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522609", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522609", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SRCQRSC", "url": "https://omabrowser.org/oma/group/SRCQRSC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZRS5", "url": "https://www.orthodb.org/?gene=A0A286ZRS5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23333", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23333", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23333:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23333:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00789", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00789", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08059", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08059", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003125416", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125416", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QET3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QET3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QET3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QET3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKEVDNLESIKEEWVCETGSDHQPLSDNQQINCEYFVDSLFEEAQKVGAKSLSPTEQKKQVDVSIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPLELQGVFDKEEVDVRVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPKIVSKAKSIEVENKNKLSTVPLNNLEPITNVQIWLANGKRIVQKFNISHRISHIKDFIEKYQGPQRSPPFSLATALPFLKLLDETLTLEEADLQNAVIIQRLKKTAEPFKELS", "length": 258, "header": "tr|A0A286ZRS5-1|A0A286ZRS5_PIG Isoform 1 of UBX domain-containing protein 2A OS=Sus scrofa OX=9823 GN=UBXN2A PE=4 SV=1 CANONICAL=A0A286ZRS5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5/entry#A0A286ZRS5-1", "sequence": { "sequence": "MKEVDNLESIKEEWVCETGSDHQPLSDNQQINCEYFVDSLFEEAQKVGAKSLSPTEQKKQVDVSIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPLELQGVFDKEEVDVRVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPKIVSKAKSIEVENKNKLSTVPLNNLEPITNVQIWLANGKRIVQKFNISHRISHIKDFIEKYQGPQRSPPFSLATALPFLKLLDETLTLEEADLQNAVIIQRLKKTAEPFKELS", "length": 258, "header": "tr|A0A286ZRS5-1|A0A286ZRS5_PIG Isoform 1 of UBX domain-containing protein 2A OS=Sus scrofa OX=9823 GN=UBXN2A PE=4 SV=1 CANONICAL=A0A286ZRS5-1" }, "locus": { "chromosome": "3", "start_pos": 114703901, "end_pos": 114678508, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050261.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050261.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034164.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034164.1" } ] } }, { "isoform_ac": "A0A5G2QET3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5/entry#A0A5G2QET3-1", "sequence": { "sequence": "PWEAGGGPAERLPSLRGSGGGGASCLSGSSPAAGAAAAPAAPERIEEAARRRRGAAPSSGRARRVCETGSDHQPLSDNQQINCEYFVDSLFEEAQKVGAKSLSPTEQKKQVDVSIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPLELQGVFDKEEVDVRVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPKIVSKAKSIEVENKNKLSTVPLNNLEPITNVQIWLANGKRIVQKFNISHRISHIKDFIEKYQGPQRSPPFSLATALPFLKLLDETLTLEEADLQNAVIIQRLKKTAEPFKELS", "length": 308, "header": "tr|A0A5G2QET3-1|A0A5G2QET3_PIG Computationally mapped isoform of UBX domain-containing protein 2A OS=Sus scrofa OX=9823 GN=UBXN2A PE=4 SV=1 CANONICAL=A0A286ZRS5-1" }, "locus": { "chromosome": "3", "start_pos": 114714107, "end_pos": 114678508, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075086.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075086.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062704.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062704.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522609", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522609", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y4Y2-1", "protein_name": "UBX domain-containing protein 2A", "gene_name": "UBXN2A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAALHRLLCGRGAALPARPGPAVGVRAARGRACAVERGTVRTWCAAEAAGGAALRGREEPQDENMDNIKTVKEEWMCKSRTGDQILNGTEQNHDYFVDNLFEEAQKIGAICMSPTTVKNQVDVIIKLWKNGFTVNDGELRSYTDVGNQQFLDSVKKGELPFELQKVFEKEEVDVKVEDKKDELYLSSKKPIFHPFSGHGYRLGSATPRIISKAREDHQGAADKRCLPVVPLNDLEPITNIQIWLADGERIIQKFNVSHRISHVRDFITKYQGSEGGVPFMLTTSLPFRELQDETLTLQEAKLQNAVVVQRLRKTTEPFRLLAMKAPDDDCKTAATPNGRLKNEQKNAMKSTSSN", "length": 354 }, "evidence": [ { "id": "A0A286ZRS5", "url": "https://omabrowser.org/oma/group/A0A286ZRS5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZID8-1", "protein_name": "UBX domain-containing protein 2A", "gene_name": "Ubxn2a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKEVDNLDSIKEEWVCETGPPDNQPLNDNPQKDCEYFVDSLFEEAEKAGAKCLSPTEQKKQVDVNIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPSELQGVFDKDEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPRIVSKAKSIEVDNKSTLSAVSLNNLEPITRIQIWLANGERTVQRFNISHRVSHIKDFIEKYQGTQRSPPFALATALPFLRFLDETLTLEEADLQNAVIIQRLQKTAEPFRKL", "length": 258 }, "evidence": [ { "id": "A0A286ZRS5", "url": "https://omabrowser.org/oma/group/A0A286ZRS5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BPQ0-1", "protein_name": "UBX domain-containing protein 2A", "gene_name": "UBXN2A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKEVDNLESIKEEWVCETGSDHQPLSDSQQKNCEYFVDSLFEEAQKVGAKCLSPTEQKKQVDVSIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPLELQGVFDKEEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPKIVSKAKNIEVENKNKLSAVPLNNLEPITNIQIWLANGKRIVQKFNISHRISHIKDFIEKYQGSQRSPPFSLATALPFLKLLDETLTLEEADLQNAVIIQRLKKTAEPFKELS", "length": 258 }, "evidence": [ { "id": "A0A286ZRS5", "url": "https://omabrowser.org/oma/group/A0A286ZRS5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7EY86-1", "protein_name": "UBX domain-containing protein 2A isoform X1", "gene_name": "ubxn2a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMKNIDSRERHEDDTWCEGAQNEEEEEEEDEEASPIRSSFSVEDLLDEVEKISSVASSGKKVEIVVRLWKNGFTLNDEDLRSYTQEENQEFLEAIKKGELPLELEGRAEDEELEVNVEDMKDEVYVPKKKIFHPFTGRGYRLGSVAPRVVARSRSIHEDCSGPPVPAVELNEDLPVTSLQIWLADGRRLVQRFNLCHRISDVQRFVEQAQITDTPFILTTSLPFRELTDEAQSLEEADLANAVIVQRPVNTHAPFGHS", "length": 258 }, "evidence": [ { "id": "A0A286ZRS5", "url": "https://omabrowser.org/oma/group/A0A286ZRS5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3GZP5-1", "protein_name": "UBX domain-containing protein 2A", "gene_name": "Ubxn2a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKEVDNLDSIKEEWVCETGPPDNQSLNDNQQRDCEYFVDSLFEEAEKVGAKCLSPTEQKKQVDINIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPSELQGIFDKEEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPKVISKAKSIEVENKSTLSAVPLNNLEPITRIQIWLANGERTVQRFNVSHRVSHIKDFIEKYQGSQRSPPFALATAFPFLRLLDETLTLEEADLQNAVIIQRLQITSEPFRKL", "length": 258 }, "evidence": [ { "id": "A0A286ZRS5", "url": "https://omabrowser.org/oma/group/A0A286ZRS5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P68543-1", "protein_name": "UBX domain-containing protein 2A", "gene_name": "UBXN2A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKDVDNLKSIKEEWVCETGSDNQPLGNNQQSNCEYFVDSLFEEAQKVSSKCVSPAEQKKQVDVNIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPSELQGIFDKEEVDVKVEDKKNEICLSTKPVFQPFSGQGHRLGSATPKIVSKAKNIEVENKNNLSAVPLNNLEPITNIQIWLANGKRIVQKFNITHRVSHIKDFIEKYQGSQRSPPFSLATALPVLRLLDETLTLEEADLQNAVIIQRLQKTASFRELSEH", "length": 259 }, "evidence": [ { "id": "A0A286ZRS5", "url": "https://omabrowser.org/oma/group/A0A286ZRS5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99KJ0-1", "protein_name": "UBX domain-containing protein 2A", "gene_name": "Ubxn2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKEVDNLDSIKEEWACETGPPDSQPLNDNQQKDCEYFVDSLFEEAGKAGAKCLSPTEQKKQVDVNIKLWKNGFTVNDDFRSYSDGASQQFLNSIKKGELPSELWGIFDKEEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGSATPRIVSKAKSVEVDNKSTLSAVSLNNLEPITRIQIWLANGERTVQRFNVSHRVSHIKDFIEKYQGSQRSPPFALATALPFLRFLDETLTLEEADLKNAVIIQRLQKTAEPFRKL", "length": 258 }, "evidence": [ { "id": "A0A286ZRS5", "url": "https://omabrowser.org/oma/group/A0A286ZRS5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "perikaryon", "id": "GO:0043204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043204", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "cis-Golgi network", "id": "GO:0005801", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005801", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "regulation of macromolecule metabolic process", "id": "GO:0060255", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060255", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "nuclear membrane reassembly", "id": "GO:0031468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031468", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "autophagosome assembly", "id": "GO:0000045", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000045", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "positive regulation of protein catabolic process", "id": "GO:0045732", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045732", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "membrane fusion", "id": "GO:0061025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061025", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "Golgi organization", "id": "GO:0007030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007030", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "negative regulation of ERAD pathway", "id": "GO:1904293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904293", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "acetylcholine receptor binding", "id": "GO:0033130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033130", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" }, { "name": "ubiquitin binding", "id": "GO:0043130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043130", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 191, "end_pos": 193, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZRS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" }, { "id": "PS51399", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51399" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SEP", "eco_id": "ECO_0000259", "start_pos": 60, "end_pos": 124, "start_aa": "Gln", "end_aa": "Met", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZRS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS5" }, { "id": "PS50033", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50033" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UBX", "eco_id": "ECO_0000259", "start_pos": 169, "end_pos": 246, "start_aa": "Asn", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 191, "end_pos": 193 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { 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"Gene Expression" ] }, { "id": "TGVNPQI", "url": "https://omabrowser.org/oma/group/TGVNPQI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZRS9", "url": "https://www.orthodb.org/?gene=A0A286ZRS9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28605", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28605", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28605:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28605:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZRS9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZRS9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKEPRIFPRERPTPWTRAPLPPRGRLDSSLGPQGGPVLNTGHPLGMNSDSFLMATGSLGGNLAPFPRNPSSFPTSSGSLASNPAPFPAGTRDPSMASFPRGMNPTGTGAVSFPRPGGLLGPGPGSALNPRAGSLPGPGPLSNPRLGGLPGPGPMSNPRAGGLLGTGPDPRSGGPMGPGSGPNMRASVLLTSGNGPPNPRPIGLGPGPGPNLRSGFVGTNPAPRSGMFPGPSLGPNPRASGLGPGLGPNPRASGLGPGPNLDTRAGGLLGTGSGLNLRMAGPQGLDLAPILRAAGLLGANSASFSQASGNMGTSPSSMARIPGPIGPNSGPGSRGIGLPGPNPSPMSRGPGPIGPNSTHFSRPAGPMGVNANPFPRGTGSGGLNPATFSQSSNTLASNPANFQRSAGLQGSNPAIFPRASGPLGPNPANFPRATGLQGPSPATFPRSTGPLGPGQVTFPRSAPGPLGSSPAGPVGINPAPFARPTGTLGLNPASFPRMNGPVSKTLVPFPRVGSLPGTNPAAFPRPGGPMAACTQMECYPLKYHFLSRTTLVSRHRGSGQGCVLSERVDRELQSEVHSWGSSSNDPPPRPPNASFMTEGEMFVTYGTWTLADGSDPALKENLQPSRACCAFIPQLSAHCFLLVS", "length": 643, "header": "tr|A0A286ZRS9-1|A0A286ZRS9_PIG Isoform 1 of DERPC proline and glycine rich nuclear protein OS=Sus scrofa OX=9823 GN=DERPC PE=4 SV=1 CANONICAL=A0A286ZRS9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRS9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS9/entry#A0A286ZRS9-1", "sequence": { "sequence": "MKEPRIFPRERPTPWTRAPLPPRGRLDSSLGPQGGPVLNTGHPLGMNSDSFLMATGSLGGNLAPFPRNPSSFPTSSGSLASNPAPFPAGTRDPSMASFPRGMNPTGTGAVSFPRPGGLLGPGPGSALNPRAGSLPGPGPLSNPRLGGLPGPGPMSNPRAGGLLGTGPDPRSGGPMGPGSGPNMRASVLLTSGNGPPNPRPIGLGPGPGPNLRSGFVGTNPAPRSGMFPGPSLGPNPRASGLGPGLGPNPRASGLGPGPNLDTRAGGLLGTGSGLNLRMAGPQGLDLAPILRAAGLLGANSASFSQASGNMGTSPSSMARIPGPIGPNSGPGSRGIGLPGPNPSPMSRGPGPIGPNSTHFSRPAGPMGVNANPFPRGTGSGGLNPATFSQSSNTLASNPANFQRSAGLQGSNPAIFPRASGPLGPNPANFPRATGLQGPSPATFPRSTGPLGPGQVTFPRSAPGPLGSSPAGPVGINPAPFARPTGTLGLNPASFPRMNGPVSKTLVPFPRVGSLPGTNPAAFPRPGGPMAACTQMECYPLKYHFLSRTTLVSRHRGSGQGCVLSERVDRELQSEVHSWGSSSNDPPPRPPNASFMTEGEMFVTYGTWTLADGSDPALKENLQPSRACCAFIPQLSAHCFLLVS", "length": 643, "header": "tr|A0A286ZRS9-1|A0A286ZRS9_PIG Isoform 1 of DERPC proline and glycine rich nuclear protein OS=Sus scrofa OX=9823 GN=DERPC PE=4 SV=1 CANONICAL=A0A286ZRS9-1" }, "locus": { "chromosome": "6", "start_pos": 17843790, "end_pos": 17841862, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046562.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046562.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056746.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056746.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 13, "start_aa": "Thr", "end_pos": 13, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr13", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRS9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "B2RYL1-1", "protein_name": "Decreased expression in renal and prostate cancer protein", "gene_name": "Derpc", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKEPRIFPRERPTPWTRAPLPPRGRLDGGPGVNAGHPMGVNTDPFLMAAGSLGGNLAPFARNPAPFPTPSGSLASNPAHFPAGARDPSMTSFPRGMNPTGTGAASFPRPGGLLGPGPGPGLNPRTGALPGSGPMSNPRLGGLPGPGPMANPRAGGLLGASPDPRSGGPMGPGCGPNMRAGVLSSGTGPPNPRPMGLGPGPSPNLRSSFLGTNPAPRPGMFPGPGLGPNPRACGLGPGLGPNPRAGGLGPGPNLDNRAGGLLGTGSGLNLRMAGPQGLDLAPILRAAGLLGTNSVSFSQASGNMGTNPPTMTRVPGPIGPNTGPSSRGIGLSGPNPSAMSRAPGPMGPNSAHFSRPGGPMGVNAGVFPRGTGSGGLNPAAFSQSSGTLSSNPGTFQRSAGLQGSNQAVFPRASGPLGPNPANFPRATGLQGPSPAAFPRSAGPLGPGQVAFPRSAAGHLGSSPAGPVGINPAPFARPTGTLGLNPASFPRMNGPVGKTLVPFPRVGSLPGSNPAAFPRPGGPMAAMYPNGMLPP", "length": 533 }, "evidence": [ { "id": "A0A286ZRS9", "url": "https://omabrowser.org/oma/group/A0A286ZRS9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0CG12-1", "protein_name": "Decreased expression in renal and prostate cancer protein", "gene_name": "DERPC", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKEPRIFPRERPTPWTRAPLPPRGRLDGSLGPQGGPVLNTGHPLGVNSDPFLMAAGSLGGNLTPFPRNPSPFPASSGSLASNPAPFPAGARDPSMASFPRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALPGPGPLSNPRLGGLPGPGPMSNPRAGGLLGAGPDPRGGGPMGPGSGPNLRAGVLLTSGNGPPNPRPVGLGPGPNPNLRSGFLGTNPAPRSGVFPGPGLGPNPRPSGLGPGPNLDARAGGLLGTGSGLNLRMAGPQGLDLAPILRAAGLLGANSASFSQASGNMGTSPSSMARVPGPMGPNSGPSSRGIGLPGPNPSPMSRAPGPIGPNSAHFSRPVGPMGVNANPFPRGAGSSAFSQSSGTLASNPATFQRSAGLQGSNPTIFPRASGPLGPNPANFPRATGLQGPSPTTFPRSTGPLGPGQVTFPRPAAGHLGPSPAGPVGINPAPFTRPTGTLGLNPASFPRMNGPAGKSFVPFPRVGSLPGTNPAAFPRPGGPMAAMYPNGMLPP", "length": 524 }, "evidence": [ { "id": "A0A286ZRS9", "url": "https://omabrowser.org/oma/group/A0A286ZRS9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CG14-1", "protein_name": "Decreased expression in renal and prostate cancer protein", "gene_name": "Derpc", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKEPRIFPRERPTPWTRAPLPPRGRLDGGPVMNAGHPMGVNSDPFLMAAGSLGGNLAPFPRNAAPFQNPSGSLASNPAHFAAGARDPGMTSFPRGMNPTGTGAVSFPRPGGLLGPGPGPGLNPRTGALPGPGPMSNPRLGGLPGPGPMANPRAGGLLGASPDPRSGGPMVPGCGPNMRAGVLSSGTGPPNPRPVGLGPGPSPNLRSSFLGTNPAPRSGMFPGPGLGPNPRACGLGPGLGPNPRAGGLGPGPNLDNRAGGLLGTGSGLNLRMAGPQGLDLAPILRAAGLLGTNSVSFSQASGNMGTNPPTMTRVPGPIGPNTGPSSRGLGLPGPNPSPMSRAPGPMGPNSAHFSRPGGPMGVNAGVFPRGTGSGGLNPNAFSQSSGTLASNPGTFQRSAGLQGSNQAVFPRASGPLGPNPANFPRATGLQGPSPAAFPRSAGPLGPGQVAFPRSAAGHLGSSPAGPVGINPAPFARPTGTLGLNPASFPRMNGPVGKTLVPFPRVGSLPGSNPAAFPRPGGPMAAMYPNGMLPP", "length": 533 }, "evidence": [ { "id": "A0A286ZRS9", "url": "https://omabrowser.org/oma/group/A0A286ZRS9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRS9", "url": 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"MKSPVVNEAGAAAKGLSTFTALMGPFSSVNSTVVNEAKVLAESFPTFTALIRLLSCVNPLMLNKVRSLTERFPTFPALIRFFSRVNFLMAIEAVALAKGFPTFAALIRPFSSMNSLMYNKTGEVGKQFSTFMALIRSFSSVDFLVLNEVTSSATGFSTFAALIKHFSSEESLVLN", "length": 175, "header": "tr|A0A286ZRT4-1|A0A286ZRT4_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A286ZRT4-1" }, "locus": { "chromosome": "6", "start_pos": 62270044, "end_pos": 62269520, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045358.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045358.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034353.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034353.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu 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synthase regulatory component factor B", "type": "synonym", "evidence": [ { "id": "A0A286ZRY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Involved in regulation of mitochondrial membrane ATP synthase. Necessary for H(+) conduction of ATP synthase. Facilitates energy-driven catalysis of ATP synthesis by blocking a proton leak through an alternative proton exit pathway.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRY7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7#function" }, { "database": "UniProtKB", "id": "ARBA00023760", "url": "https://www.uniprot.org/uniprotkb/ARBA00023760#function" }, { "database": "UniProtKB", "id": "A0A4X1SG97", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SG97#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZRY7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DMAC2L", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7", "locus": { "chromosome": "1", "start_pos": 180081412, "end_pos": 180068973, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000031354", "url": "https://www.ensembl.org/id/ENSSSCG00000031354" } ] } } ], "crossref": [ { "id": "ENSSSCG00000031354", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000031354", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100157404", "url": "https://www.ncbi.nlm.nih.gov/gene/100157404", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IFDMLYV", "url": "https://omabrowser.org/oma/group/IFDMLYV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZRY7", "url": "https://www.orthodb.org/?gene=A0A286ZRY7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZRY7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7", "database": "UniProtKB", 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"sequence": "MRGAPLPHVGAAINGQWARAAKGEGQAGATVDARDAHSLPPSLRRYQMMLFGKVPRQLCALKKLPWSRDSRYFWGWLNAVFNKVDHERIRDVGPDRAASEWLLRCGAMVRYHGQERWQKDYNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRFCKCHYIEDYCLERLSQIENLQKSMLEMEIISCGNITDKGIIALHHLRNLKYLFLSDLPGVKEKEKIVQAFKTSLPSLELKLDLK", "length": 247, "header": "tr|A0A286ZRY7-1|A0A286ZRY7_PIG Isoform 1 of ATP synthase subunit s, mitochondrial OS=Sus scrofa OX=9823 GN=DMAC2L PE=1 SV=1 CANONICAL=A0A286ZRY7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZRY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7/entry#A0A286ZRY7-1", "sequence": { "sequence": "MRGAPLPHVGAAINGQWARAAKGEGQAGATVDARDAHSLPPSLRRYQMMLFGKVPRQLCALKKLPWSRDSRYFWGWLNAVFNKVDHERIRDVGPDRAASEWLLRCGAMVRYHGQERWQKDYNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRFCKCHYIEDYCLERLSQIENLQKSMLEMEIISCGNITDKGIIALHHLRNLKYLFLSDLPGVKEKEKIVQAFKTSLPSLELKLDLK", "length": 247, "header": "tr|A0A286ZRY7-1|A0A286ZRY7_PIG Isoform 1 of ATP synthase subunit s, mitochondrial OS=Sus scrofa OX=9823 GN=DMAC2L PE=1 SV=1 CANONICAL=A0A286ZRY7-1" }, "locus": { "chromosome": "1", "start_pos": 180079972, "end_pos": 180069172, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039137.2", "url": "https://www.ensembl.org/id/ENSSSCT00000039137.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034229.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034229.1" } ] } }, { "isoform_ac": "A0A4X1SG97-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7/entry#A0A4X1SG97-1", "sequence": { "sequence": "MMLFGKVPRQLCALKKLPWSRDSRYFWGWLNAVFNKVDHERIRDVGPDRAASEWLLRCGAMVRYHGQERWQKDYNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRFCKCHYIEDYCLERLSQIENLQKSMLEMEIISCGNITDKGIIALHHLRNLKYLFLSDLPGVKEKEKIVQAFKTSLPSLELKLDLK", "length": 200, "header": "tr|A0A4X1SG97-1|A0A4X1SG97_PIG Computationally mapped isoform of ATP synthase subunit s, mitochondrial OS=Sus scrofa OX=9823 GN=DMAC2L PE=1 SV=1 CANONICAL=A0A286ZRY7-1" }, "locus": { "chromosome": "1", "start_pos": 180079972, "end_pos": 180075365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041018.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041018.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035990.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035990.1" } ] } }, { "isoform_ac": "A0A8W4F7N1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7/entry#A0A8W4F7N1-1", "sequence": { "sequence": "MMLFGKVPRQLCALKKLPWSRDSRYFWGWLNAVFNKVDHERIRDVGPDRAASEWLLRCGAMVRYHGQERWQKDYNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMETSSICF", "length": 112, "header": "tr|A0A8W4F7N1-1|A0A286ZRY7_PIG Computationally mapped isoform of ATP synthase subunit s, mitochondrial OS=Sus scrofa OX=9823 GN=DMAC2L PE=1 SV=1 CANONICAL=A0A286ZRY7-1" }, "locus": { "chromosome": "1", "start_pos": 180079880, "end_pos": 180075365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094790.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094790.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075286.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075286.1" } ] } }, { "isoform_ac": "A0A8W4FMK6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZRY7/entry#A0A8W4FMK6-1", "sequence": { "sequence": "MMLFGKVPRQLCALKKLPWSRDSRYFWGWLNAVFNKVDHERIRDVGPDRAASEWLLRCGAMVRYHGQERWQKDYNHLPTGPLDKYKIQAIDATDSCIMSIGFDHMGNSPILMGNVGDLQ", "length": 119, "header": "tr|A0A8W4FMK6-1|A0A8W4FMK6_PIG Computationally mapped isoform of Distal membrane arm assembly component 2 like OS=Sus scrofa OX=9823 GN=DMAC2L PE=1 SV=1 CANONICAL=A0A286ZRY7-1" }, "locus": { "chromosome": "1", "start_pos": 180076885, "end_pos": 180075365, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094980.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094980.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080422.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080422.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], 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"database": "UniProtKB", "id": "A0A286ZS41", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS41" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS41", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS41" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS41", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS41" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": 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"length": 116, "header": "tr|A0A286ZS45-1|A0A286ZS45_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A286ZS45-1" }, "locus": { "chromosome": "7", "start_pos": 112836626, "end_pos": 112831659, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051431.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051431.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034397.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034397.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., 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"AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000033548", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033548", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR029152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PAQCHRH", "url": "https://omabrowser.org/oma/group/PAQCHRH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35665", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35665", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35665:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35665:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZS55", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZS55-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS55-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQPPAKEAGRRGPGERAGEGRAKGPPAAAAAAAAAAAPLKPGWVLTLEGLAALSPAQRHSHLLFGDLLEDVGAAASVFPRESAEPGYRMPDPRAWTQPLEPPGQRQDRLLGILKAAEARGRVRALRLRYARMRAEEISLLILRQKSARAAIRLETFLPPQLKPTRIPDPLDRQERRRVETILEEKVDGSTFPR", "length": 193, "header": "tr|A0A286ZS55-1|A0A286ZS55_PIG Isoform 1 of LKAAEAR motif containing 1 OS=Sus scrofa OX=9823 GN=LKAAEAR1 PE=4 SV=1 CANONICAL=A0A286ZS55-1" }, "isoforms": [ { "isoform_ac": "A0A286ZS55-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS55/entry#A0A286ZS55-1", "sequence": { "sequence": "MQPPAKEAGRRGPGERAGEGRAKGPPAAAAAAAAAAAPLKPGWVLTLEGLAALSPAQRHSHLLFGDLLEDVGAAASVFPRESAEPGYRMPDPRAWTQPLEPPGQRQDRLLGILKAAEARGRVRALRLRYARMRAEEISLLILRQKSARAAIRLETFLPPQLKPTRIPDPLDRQERRRVETILEEKVDGSTFPR", "length": 193, "header": "tr|A0A286ZS55-1|A0A286ZS55_PIG Isoform 1 of LKAAEAR motif containing 1 OS=Sus scrofa OX=9823 GN=LKAAEAR1 PE=4 SV=1 CANONICAL=A0A286ZS55-1" }, "locus": { "chromosome": "17", "start_pos": 62900207, "end_pos": 62899408, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046541.2", "url": "https://www.ensembl.org/id/ENSSSCT00000046541.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034407.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034407.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS55", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS55" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D3ZIM8-1", "protein_name": "LKAAEAR motif containing 1", "gene_name": "Lkaaear1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAYDHSDASCGATMACRTIEYTTETGEDQKVMAYCRYTQDWSMPTPGVKGAREQAKKSAPVAGAGEKRKKGPWTTEPPKPGWALTQEKLAAMSSTVRRRHLLFSDLLDMVEVGSMFPRESVELSYCMPDPRIWTQALELPSERQNRLLGILKAAEARGRIRALRLRYTRMRAEEISLLIQKQRCARAAIRLELFLPPQLKPTKIPDPLDRQERRRVETILEEEVDGNIFPR", "length": 231 }, "evidence": [ { "id": "A0A286ZS55", "url": "https://omabrowser.org/oma/group/A0A286ZS55/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BIG2-1", "protein_name": "Protein LKAAEAR1", "gene_name": "Lkaaear1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPTLGVKGARERDKNSASGAGAGAGAGAGAGEKHRKGPRTTDPPKTGWALTKQRLVALSPTLRQRHLLFGDFLDDIGKVASMFPRESVELPYDMPDPRTWSQALNLPSEHQNRFLGLIKAAEARGRVHTLRLRYTRMRAEEISLLIQKQSSARAAIRLELFLPPQLKPTKIPDPLDRHERRRVETILEEEVDGNIFPR", "length": 198 }, "evidence": [ { "id": "A0A286ZS55", "url": "https://omabrowser.org/oma/group/A0A286ZS55/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8TD35-1", "protein_name": "Protein LKAAEAR1", "gene_name": "LKAAEAR1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPPPAKEGGRKGPRERSGKSAPGTAQGEERAKGAPATEPPKPGWALTPQGLAAMLPAQRHRHLLFGDLLEDVGAAASTFPCGSVEPGYRMPDPRPWTQSLELPAERQNRLLGVLKAAEARGRVRALRLRYTRMRAEEIALLIQRQKSARAAIRLELFLPPQLKPARIPDPLDRQERRRVETILEENVDGTIFPR", "length": 194 }, "evidence": [ { "id": "A0A286ZS55", "url": "https://omabrowser.org/oma/group/A0A286ZS55/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZS55-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 193, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZS55-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZS55" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZS85-1", "uniprot_ac": "A0A286ZS85", "uniprot_id": "A0A286ZS85_PIG", "mass": { "chemical_mass": 317001.0, "monoisotopic_mass": 317001.0 }, "refseq": { "ac": "XP_005653793", "name": "protein PRRC2C isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653793" }, "gene_names": [ { "name": "PRRC2C", "type": "recommended", "evidence": [ { "id": "A0A286ZS85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85" } ] }, { "name": "PRRC2C", "type": "synonym", "evidence": [ { "id": "XP_005653793", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653793" } ] } ], "protein_names": [ { "name": "Proline rich coiled-coil 2C", "type": "synonym", "evidence": [ { "id": "A0A286ZS85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85/entry#names_and_taxonomy" } ] }, { "name": "protein PRRC2C isoform X4", "type": "synonym", "evidence": [ { "id": "XP_005653793", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653793" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZS85", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PRRC2C", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85", "locus": { "chromosome": "9", "start_pos": 114067553, "end_pos": 113973325, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015480", "url": "https://www.ensembl.org/id/ENSSSCG00000015480" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015480", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015480", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100157197", "url": "https://www.ncbi.nlm.nih.gov/gene/100157197", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009738", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009738", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033184", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033184", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZS85", "url": "https://www.orthodb.org/?gene=A0A286ZS85", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14038", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14038", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14038:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14038:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07001", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07001", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005653793", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653793", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZS85", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZS85-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXS8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXS8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXS8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXS8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZP9", "url": "https://www.uniprot.org/uniprotkb/A0A287AZP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZP9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B621", "url": "https://www.uniprot.org/uniprotkb/A0A287B621", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B621-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B621-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR40", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR40", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR40-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR40-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7T1", "url": "https://www.uniprot.org/uniprotkb/F1S7T1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7T1-1", "url": "https://www.uniprot.org/uniprotkb/F1S7T1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVPPAQPKPGVTAPPEVAPAPKSWASNKQGGQGDGIQVNSHFQQEFPSLQAAGDQEKKEKEANDDNYGPGPSLRPPNVACWRDGGKSVGSPLTSDQDEKPGQDESAAGTSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKENSSEDQDSKGSENTENRKEADEVYNTKSSSQIPAQPPVAKGPYGKGPPFNQDRGPSSHLPPPPKLLAQQHPPPDRQAAPGRPGPFPPKQQVPDEDEIWKQRRRQQSELSAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIVDKQPSPEEIREREREKEREKEREREKELEKEQEREREKEREKERERQQEKEKELEREQEKQREMEKERKQEKEKEIERQQEKEKELQVMKEQEKECELEKKEREKMEEKTEHREPTLEPMVEKPESENNCNKEDDPVFSRQDSNRSEKETTQAAHEAEPESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQGVLPQTVPSQPSSGAVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLMRRDQVEGTPNNSESFEHIARTTRDHAISLSEPRVMWGSDTYPHTEPQQATTPKATEEPEDVRPEAPLDQEQITAAYPVEHSQLEAHPKADFIRESSETEVQKFLSRSVEDIRPHHTDTNNQSACFDVSDRKTISTPQEERISSGETQPARKRSVSHGSNHTQKSEEQRNEPSASIPKVTGRCLDSKEPAERPEEKPKKEGFIRSSEGPKPEKPYKSKSETRWGPRPGSNRREEGNDRPVRRSGPIKKPILRDMKEEREQRKEKEGEKGEKVTEKIAKPEKTEKKEPLPPPPPPVAPVQPQLVPPPPQPESEKFPSVETSTLVQKPPQDTEKALEPVSNVEVEPAAKTVNQQTVSAPTVKEEKQPEKISKDLVTERTRPDSRPAIKKESTLPPRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPQYRDSKPRTEHVPPGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPQSFKPENHVRIDNRPLEKPFVRDDDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQAEVPKPDDGEPPRRHEQFIPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVAVPTNGTVNNVVQEPVNTAGDISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQVVVKAGENVLPPKREIAKRSFSSQRPGIDRQNRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKRGPFDDQSAGTTGADPVNGSSAHHQEGAPNGTGQKNSKDSTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQIIQVWNKKNASEKGRSQTSKLPPRFAKKQATGTQQAQPPASALVSAPGPGSTSAPVPATTSAPVLASAPAPVLASSSAPVSAPAAVPILTSTSAALPTLASASAPVPAPASTSATATASSSVPAPTPILASVSTSASVPILTSASIPILASALAPASVPSPAVSAPTVPTSTPAAPASASTTPASLPAPTPTPAPAPAAAPTPASTLVQVPALPPAPASTAPGQTQGQIHKTVQSPLQTTTQSSKQPPPSIRLPSAQTPNGTDYVATGKSIQSSQSHGTLKTELWDNKVAPQAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSAASSEGTKNSQESGVEIGIDTIQFGAPASNGNENEIVPVLSEKTTDKMSEPKEQRQKQPRAGPIKAQKLPDLSPVENKEHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPATVRSTDPVTTKETKAVSEISTEIGTMISVSSTEYGTNVKESVTDYTTPSSSLPNTVATNNAKMEDTLVNNVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIASGVSSSASGPSTANYNSFSSASMPQIPVASVTPTTSLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSVQQIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSLQPYRSQPAFMQSNLSQPSVVLSGTAIHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGGSQLIDTHLLQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLPNFGSTGQPLIALPQTLQPPLQHTTAQAQAQSLSRPAQVSQPFRGLIPAGTQHSMIATTGKMSEMELKAFGSGIDIKPGTPPISGRSTTPTSSPFRATSTSPNSQSSKMNSIVYQKQFQSAPATVRMTQPFPTQFAPQILSQPNLVPPLVRAPHTNTFPAPVQRPPMALASQMPPPLTTGLMSHARLPHVARGPCGSLSGVRGNQAQAALKAEQDMKAKQRAEVLQSTQRFFSEQQQNKQIGSKAQKVDSDTSKPSETLTDPPGVCQEKVEEKPPPAPTIATKPVRTGPIKPQAIKTEETKS", "length": 2894, "header": "tr|A0A286ZS85-1|A0A286ZS85_PIG Isoform 1 of Proline rich coiled-coil 2C OS=Sus scrofa OX=9823 GN=PRRC2C PE=1 SV=2 CANONICAL=A0A286ZS85-1" }, "isoforms": [ { "isoform_ac": "A0A286ZS85-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85/entry#A0A286ZS85-1", "sequence": { "sequence": "MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVPPAQPKPGVTAPPEVAPAPKSWASNKQGGQGDGIQVNSHFQQEFPSLQAAGDQEKKEKEANDDNYGPGPSLRPPNVACWRDGGKSVGSPLTSDQDEKPGQDESAAGTSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKENSSEDQDSKGSENTENRKEADEVYNTKSSSQIPAQPPVAKGPYGKGPPFNQDRGPSSHLPPPPKLLAQQHPPPDRQAAPGRPGPFPPKQQVPDEDEIWKQRRRQQSELSAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIVDKQPSPEEIREREREKEREKEREREKELEKEQEREREKEREKERERQQEKEKELEREQEKQREMEKERKQEKEKEIERQQEKEKELQVMKEQEKECELEKKEREKMEEKTEHREPTLEPMVEKPESENNCNKEDDPVFSRQDSNRSEKETTQAAHEAEPESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQGVLPQTVPSQPSSGAVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLMRRDQVEGTPNNSESFEHIARTTRDHAISLSEPRVMWGSDTYPHTEPQQATTPKATEEPEDVRPEAPLDQEQITAAYPVEHSQLEAHPKADFIRESSETEVQKFLSRSVEDIRPHHTDTNNQSACFDVSDRKTISTPQEERISSGETQPARKRSVSHGSNHTQKSEEQRNEPSASIPKVTGRCLDSKEPAERPEEKPKKEGFIRSSEGPKPEKPYKSKSETRWGPRPGSNRREEGNDRPVRRSGPIKKPILRDMKEEREQRKEKEGEKGEKVTEKIAKPEKTEKKEPLPPPPPPVAPVQPQLVPPPPQPESEKFPSVETSTLVQKPPQDTEKALEPVSNVEVEPAAKTVNQQTVSAPTVKEEKQPEKISKDLVTERTRPDSRPAIKKESTLPPRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPQYRDSKPRTEHVPPGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPQSFKPENHVRIDNRPLEKPFVRDDDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQAEVPKPDDGEPPRRHEQFIPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVAVPTNGTVNNVVQEPVNTAGDISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQVVVKAGENVLPPKREIAKRSFSSQRPGIDRQNRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKRGPFDDQSAGTTGADPVNGSSAHHQEGAPNGTGQKNSKDSTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQIIQVWNKKNASEKGRSQTSKLPPRFAKKQATGTQQAQPPASALVSAPGPGSTSAPVPATTSAPVLASAPAPVLASSSAPVSAPAAVPILTSTSAALPTLASASAPVPAPASTSATATASSSVPAPTPILASVSTSASVPILTSASIPILASALAPASVPSPAVSAPTVPTSTPAAPASASTTPASLPAPTPTPAPAPAAAPTPASTLVQVPALPPAPASTAPGQTQGQIHKTVQSPLQTTTQSSKQPPPSIRLPSAQTPNGTDYVATGKSIQSSQSHGTLKTELWDNKVAPQAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSAASSEGTKNSQESGVEIGIDTIQFGAPASNGNENEIVPVLSEKTTDKMSEPKEQRQKQPRAGPIKAQKLPDLSPVENKEHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPATVRSTDPVTTKETKAVSEISTEIGTMISVSSTEYGTNVKESVTDYTTPSSSLPNTVATNNAKMEDTLVNNVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIASGVSSSASGPSTANYNSFSSASMPQIPVASVTPTTSLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSVQQIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSLQPYRSQPAFMQSNLSQPSVVLSGTAIHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGGSQLIDTHLLQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLPNFGSTGQPLIALPQTLQPPLQHTTAQAQAQSLSRPAQVSQPFRGLIPAGTQHSMIATTGKMSEMELKAFGSGIDIKPGTPPISGRSTTPTSSPFRATSTSPNSQSSKMNSIVYQKQFQSAPATVRMTQPFPTQFAPQILSQPNLVPPLVRAPHTNTFPAPVQRPPMALASQMPPPLTTGLMSHARLPHVARGPCGSLSGVRGNQAQAALKAEQDMKAKQRAEVLQSTQRFFSEQQQNKQIGSKAQKVDSDTSKPSETLTDPPGVCQEKVEEKPPPAPTIATKPVRTGPIKPQAIKTEETKS", "length": 2894, "header": "tr|A0A286ZS85-1|A0A286ZS85_PIG Isoform 1 of Proline rich coiled-coil 2C OS=Sus scrofa OX=9823 GN=PRRC2C PE=1 SV=2 CANONICAL=A0A286ZS85-1" }, "locus": { "chromosome": "9", "start_pos": 114065872, "end_pos": 113992775, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060211.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060211.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034325.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034325.2" } ] } }, { "isoform_ac": "A0A286ZXS8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85/entry#A0A286ZXS8-1", "sequence": { "sequence": "MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVPPAQPKPGVTAPPEVAPAPKSWASNKQGGQGDGIQVNSHFQQEFPSLQAAGDQEKKEKEANDDNYGPGPSLRPPNVACWRDGGKSVGSPLTSDQDEKPGQDESAAGTSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKENSSEDQDSKGSENTENRKEADEVYNTKSSSQIPAQPPVAKGPYGKGPPFNQDRGPSSHLPPPPKLLAQQHPPPDRQAAPGRPGPFPPKQQVPDEDEIWKQRRRQQSELSAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIVDKQPSPEEIREREREKEREKEREREKELEKEQEREREKEREKERERQQEKEKELEREQEKQREMEKERKQEKEKEIERQQEKEKELQVMKEQEKECELEKKEREKMEEKTEHREPTLEPMVEKPESENNCNKEDDPVFSRQDSNRSEKETTQAAHEAEPESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQGVLPQTVPSQPSSGAVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLMRRDQVEGTPNNSESFEHIARTTRDHAISLSEPRVMWGSDTYPHTEPQQATTPKATEEPEDVRPEAPLDQEQITAAYPVEHSQLEAHPKADFIRESSETEVQKFLSRSVEDIRPHHTDTNNQSACFDVSDRKTISTPQEERISSGETQPARKRSVSHGSNHTQKSEEQRNEPSASIPKVTGRCLDSKEPAERPEEKPKKEGFIRSSEGPKPEKPYKSKSETRWGPRPGSNRREEGNDRPVRRSGPIKKPILRDMKEEREQRKEKEGEKGEKQPEKISKDLVTERTRPDSRPAIKKESTLPPRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPQYRDSKPRTEHVPPGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPQSFKPENHVRIDNRPLEKPFVRDDDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQAEVPKPDDGEPPRRHEQFIPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVAVPTNGTVNNVVQEPVNTAGDISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQVVVKAGENVLPPKREIAKRSFSSQRPGIDRQNRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKRGPFDDQSAGTTGADPVNGSSAHHQEGAPNGTGQKNSKDSTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQIIQVWNKKNASEKGRSQTSKLPPRFAKKQATGTQQAQPPASALVSAPGPGSTSAPVPATTSAPVLASAPAPVLASSSAPVSAPAAVPILTSTSAALPTLASASAPVPAPASTSATATASSSVPAPTPILASVSTSASVPILTSASIPILASALAPASVPSPAVSAPTVPTSTPAAPASASTTPASLPAPTPTPAPAPAAAPTPASTLVQVPALPPAPASTAPGQTQGQIHKTVQSPLQTTTQSSKQPPPSIRLPSAQTPNGTDYVATGKSIQSSQSHGTLKTELWDNKVAPQAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSAASSEGTKNSQESGVEIGIDTIQFGAPASNGNENEIVPVLSEKTTDKMSEPKEQRQKQPRAGPIKAQKLPDLSPVENKEHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPATVRSTDPVTTKETKAVSEISTEIGTMISVSSTEYGTNVKESVTDYTTPSSSLPNTVATNNAKMEDTLVNNVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIASGVSSSASGPSTANYNSFSSASMPQIPVASVTPTTSLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSVQQIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSLQPYRSQPAFMQSNLSQPSVVLSGTAIHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGGSQLIDTHLLQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLPNFGSTGQPLIALPQTLQPPLQHTTAQAQAQSLSRPAQVSQPFRGLIPAGTQHSMIATTGKMSEMELKAFGSGIDIKPGTPPISGRSTTPTSSPFRATSTSPNSQSSKMNSIVYQKQFQSAPATVRMTQPFPTQFAPQILSQPNLVPPLVRAPHTNTFPAPVQRPPMALASQMPPPLTTGLMSHARLPHVARGPCGSLSGVRGNQAQAALKAEQDMKKRAVGRGLSHKTFGPRCWQSREQRFFSPRNGSSLNSNRTNR", "length": 2758, "header": "tr|A0A286ZXS8-1|A0A286ZXS8_PIG Computationally mapped isoform of Proline rich coiled-coil 2C OS=Sus scrofa OX=9823 GN=PRRC2C PE=1 SV=2 CANONICAL=A0A286ZS85-1" }, "locus": { "chromosome": "9", "start_pos": 114065687, "end_pos": 113992775, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054927.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054927.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036451.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036451.2" } ] } }, { "isoform_ac": "A0A287AZP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85/entry#A0A287AZP9-1", "sequence": { "sequence": "MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVPPAQPKPGVTAPPEVAPAPKSWASNKQGGQGDGIQVNSHFQQEFPSLQAAGDQEKKEKEANDDNYGPGPSLRPPNVACWRDGGKSVGSPLTSDQDEKPGQDESAAGTSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKENSSEDQDSKGSENTENRKEADEVYNTKSSSQIPAQPPVAKGPYGKGPPFNQDRGPSSHLPPPPKLLAQQHPPPDRQAAPGRPGPFPPKQQVPDEDEIWKQRRRQQSELSAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIVDKQPSPEEIREREREKEREKEREREKELEKEQEREREKEREKERERQQEKEKELEREQEKQREMEKERKQEKEKEIERQQEKEKELQVMKEQEKECELEKKEREKMEEKTEHREPTLEPMVEKPESENNCNKEDDPVFSRQDSNRSEKETTQAAHEAEPESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQGVLPQTVPSQPSSGAVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLMRRDQVEGTPNNSESFEHIARTTRDHAISLSEPRVMWGSDTYPHTEPQQATTPKATEEPEDVRPEAPLDQEQITAAYPVEHSQLEAHPKADFIRESSETEVQKFLSRSVEDIRPHHTDTNNQSACFDVSDRKTISTPQEERISSGETQPARKRSVSHGSNHTQKSEEQRNEPSASIPKVTGRCLDSKEPAERPEEKPKKEGFIRSSEGPKPEKPYKSKSETRWGPRPGSNRREEGNDRPVRRSGPIKKPILRDMKEEREQRKEKEGEKGEKVTEKIAKPEKTEKKEPLPPPPPPVAPVQPQLVPPPPQPESEKFPSVETSTLVQKPPQDTEKALEPVSNVEVEPAAKTVNQQTVSAPTVKEEKQPEKISKDLVTERTRPDSRPAIKKESTLPPRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPQYRDSKPRTEHVPPGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPQSFKPENHVRIDNRPLEKPFVRDDDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQAEVPKPDDGEPPRRHEQFIPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVAVPTNGTVNNVVQEPVNTAGDISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQVVVKAGENVLPPKREIAKRSFSSQRPGIDRQNRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKRGPFDDQSAGTTGADPVNGSSAHHQEGAPNGTGQKNSKDSTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQIIQVWNKKNASEKGRSQTSKLPPRFAKKQATGTQQAQPPASALVSAPGPGSTSAPVPATTSAPVLASAPAPVLASSSAPVSAPAAVPILTSTSAALPTLASASAPVPAPASTSATATASSSVPAPTPILASVSTSASVPILTSASIPILASALAPASVPSPAVSAPTVPTSTPAAPASASTTPASLPAPTPTPAPAPAAAPTPASTLVQVPALPPAPASTAPGQTQGQIHKTVQSPLQTTTQSSKQPPPSIRLPSAQTPNGTDYVATGKSIQSSQSHGTLKTELWDNKVAPQAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSAASSEGTKNSQESGVEIGIDTIQFGAPASNGNENEIVPVLSEKTTDKMSEPKEQRQKQPRAGPIKAQKLPDLSPVENKEHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPATVRSTDPVTTKETKAVSEISTEIGTMISVSSTEYGTNVKESVTDYTTPSSSLPNTVATNNAKMEDTLVNNVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIASGVSSSASGPSTANYNSFSSASMPQIPVASVTPTTSLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSVQQIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSLQPYRSQPAFMQSNLSQPSVVLSGTAIHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGGSQLIDTHLLQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLPNFGSTGQPLIALPQTLQPPLQHTTAQAQAQSLSRPAQVSQPFRGLIPAGTQHSMIATTGKMSEMELKAFGSGIDIKPGTPPISGRSTTPTSSPFRATSTSPNSQSSKMNSIVYQKQFQSAPATVRMTQPFPTQFAPQAKQRAEVLQSTQRFFSEQQQNKQIGSKAQKVDSDTSKPSETLTDPPGVCQEKVEEKPPPAPTIATKPVRTGPIKPQAIKTEETKS", "length": 2815, "header": "tr|A0A287AZP9-1|A0A287AZP9_PIG Computationally mapped isoform of Proline rich coiled-coil 2C OS=Sus scrofa OX=9823 GN=PRRC2C PE=1 SV=1 CANONICAL=A0A286ZS85-1" }, "locus": { "chromosome": "9", "start_pos": 114065872, "end_pos": 113992775, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065140.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065140.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049373.1", "url": "https://www.ensembl.org/id/ENSSSCP00000049373.1" } ] } }, { "isoform_ac": "A0A287B621-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85/entry#A0A287B621-1", "sequence": { "sequence": "MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVPPAQPKPGVTAPPEVAPAPKSWASNKQGGQGDGIQVNSHFQQEFPSLQAAGDQEKKEKEANDDNYGPGPSLRPPNVACWRDGGKSVGSPLTSDQDEKPGQDESAAGTSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKENSSEDQDSKGSENTENRKEADEVYNTKSSSQIPAQPPVAKGPYGKGPPFNQDRGPSSHLPPPPKLLAQQHPPPDRQAAPGRPGPFPPKQQVPDEDEIWKQRRRQQSELSAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIVDKQPSPEEIREREREKEREKEREREKELEKEQEREREKEREKERERQQEKEKELEREQEKQREMEKERKQEKEKEIERQQEKEKELQVMKEQEKECELEKKEREKMEEKTEHREPTLEPMVEKPESENNCNKEDDPVFSRQDSNRSEKETTQAAHEAEPESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQGVLPQTVPSQPSSGAVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLMRRDQVEGTPNNSESFEHIARTTRDHAISLSEPRVMWGSDTYPHTEPQQATTPKATEEPEDVRPEAPLDQEQITAAYPVEHSQLEAHPKADFIRESSETEVQKFLSRSVEDIRPHHTDTNNQSACFDVSDRKTISTPQEERISSGETQPARKRSVSHGSNHTQKSEEQRNEPSASIPKVTGRCLDSKEPAERPEEKPKKEGFIRSSEGPKPEKPYKSKSETRWGPRPGSNRREEGNDRPVRRSGPIKKPILRDMKEEREQRKEKEGEKGEKVTEKIAKPEKTEKKEPLPPPPPPVAPVQPQLVPPPPQPESEKFPSVETSTLVQKPPQDTEKALEPVSNVEVEPAAKTVNQQTVSAPTVKEEKQPEKISKDLVTERTRPDSRPAIKKESTLPPRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPQYRDSKPRTEHVPPGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPQSFKPENHVRIDNRPLEKPFVRDDDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQAEVPKPDDGEPPRRHEQFIPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVAVPTNGTVNNVVQEPVNTAGDISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQVVVKAGENVLPPKREIAKRSFSSQRPGIDRQNRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKRGPFDDQSAGTTGADPVNGSSAHHQEGAPNGTGQKNSKDSTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQIIQVWNKKNASEKGRSQTSKLPPRFAKKQATGTQQAQPPASALVSAPGPGSTSAPVPATTSAPVLASAPAPVLASSSAPVSAPAAVPILTSTSAALPTLASASAPVPAPASTSATATASSSVPAPTPILASVSTSASVPILTSASIPILASALAPASVPSPAVSAPTVPTSTPAAPASASTTPASLPAPTPTPAPAPAAAPTPASTLVQVPALPPAPASTAPGQTQGQIHKTVQSPLQTTTQSSKQPPPSIRLPSAQTPNGTDYVATGKSIQSSQSHGTLKTELWDNKVAPQAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSAASSEGTKNSQESGVEIGIDTIQFGAPASNGNENEIVPVLSEKTTDKMSEPKEQRQKQPRAGPIKAQKLPDLSPVENKEHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPATVRSTDPVTTKETKAVSEISTEIGTMISVSSTEYGTNVKVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIASGVSSSASGPSTANYNSFSSASMPQIPVASVTPTTSLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSVQQIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSLQPYRSQPAFMQSNLSQPSVVLSGTAIHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGGSQLIDTHLLQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLPNFGSTGQPLIALPQTLQPPLQHTTAQAQAQSLSRPAQVSQPFRGLIPAGTQHSMIATTGKMSEMELKAFGSGIDIKPGTPPISGRSTTPTSSPFRATSTSPNSQSSKMNSIVYQKQFQSAPATVRMTQPFPTQFAPQILSQPNLVPPLVRAPHTNTFPAPVQRPPMALASQMPPPLTTGLMSHARLPHVARGPCGSLSGVRGNQAQAALKAEQDMKAKQRAEVLQSTQRFFSEQQQNKQIGSKAQKVDSDTSKPSETLTDPPGVCQEKVEEKPPPAPTIATKPVRTGPIKPQAIKTEETKS", "length": 2863, "header": "tr|A0A287B621-1|A0A287B621_PIG Computationally mapped isoform of Proline rich coiled-coil 2C OS=Sus scrofa OX=9823 GN=PRRC2C PE=1 SV=1 CANONICAL=A0A286ZS85-1" }, "locus": { "chromosome": "9", "start_pos": 114065872, "end_pos": 113992775, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066046.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066046.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051532.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051532.1" } ] } }, { "isoform_ac": "A0A5G2QR40-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85/entry#A0A5G2QR40-1", "sequence": { "sequence": "MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVPPAQPKPGVTAPPEVAPAPKSWASNKQGGQGDGIQVNSHFQQEFPSLQAAGDQEKKEKEANDDNYGPGPSLRPPNVACWRDGGKSVGSPLTSDQDEKPGQDESAAGTSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKENSSEDQDSKGSENTENRKEADEVYNTKSSSQIPAQPPVAKGPYGKGPPFNQDRGPSSHLPPPPKLLAQQHPPPDRQAAPGRPGPFPPKQQVPDEDEIWKQRRRQQSELSAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIVDKQPSPEEIREREREKEREKEREREKELEKEQEREREKEREKERERQQEKEKELEREQEKQREMEKERKQEKEKEIERQQEKEKELQVMKEQEKECELEKKEREKMEEKTEHREPTLEPMVEKPESENNCNKEDDPVFSRQDSNRSEKETTQAAHEAEPESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQGVLPQTVPSQPSSGAVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLMRRDQVEGTPNNSESFEHIARTTRDHAISLSEPRVMWGSDTYPHTEPQQATTPKATEEPEDVRPEAPLDQEQITAAYPVEHSQLEAHPKADFIRESSETEVQKFLSRSVEDIRPHHTDTNNQSACFDVSDRKTISTPQEERISSGETQPARKRSVSHGSNHTQKSEEQRNEPSASIPKVTGRCLDSKEPAERPEEKPKKEGFIRSSEGPKPEKPYKSKSETRWGPRPGSNRREEGNDRPVRRSGPIKKPILRDMKEEREQRKEKEGEKGEKVTEKIAKPEKTEKKEPLPPPPPPVAPVQPQLVPPPPQPESEKFPSVETSTLVQKPPQDTEKALEPVSNVEVEPAAKTVNQQTVSAPTVKEEKQPEKISKDLVTERTRPDSRPAIKKESTLPPRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPQYRDSKPRTEHVPPGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPQSFKPENHVRIDNRPLEKPFVRDDDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQAEVPKPDDGEPPRRHEQFIPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVAVPTNGTVNNVVQEPVNTAGDISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQVVVKAGENVLPPKREIAKRSFSSQRPGIDRQNRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKRGPFDDQSAGTTGADPVNGSSAHHQEGAPNGTGQKNSKDSTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQIIQVWNKKNASEKGRSQTSKLPPRFAKKQATGTQQAQPPASALVSAPGPGSTSAPVPATTSAPVLASAPAPVLASSSAPVSAPAAVPILTSTSAALPTLASASAPVPAPASTSATATASSSVPAPTPILASVSTSASVPILTSASIPILASALAPASVPSPAVSAPTVPTSTPAAPASASTTPASLPAPTPTPAPAPAAAPTPASTLVQVPALPPAPASTAPGQTQGQIHKTVQSPLQTTTQSSKQPPPSIRLPSAQTPNGTDYVATGKSIQSSQSHGTLKTELWDNKVAPQAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSAASSEGTKNSQESGVEIGIDTIQFGAPASNGNENEIVPVLSEKTTDKMSEPKEQRQKQPRAGPIKAQKLPDLSPVENKEHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPATVRSTDPVTTKETKAVSEISTEIGTMISVSSTEYGTNVKESVTDYTTPSSSLPNTVATNNAKMEDTLVNNVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIASGVSSSASGPSTANYNSFSSASMPQIPVASVTPTTSLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSVQQIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSLQPYRSQPAFMQSNLSQPSVVLSGTAIHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGGSQLIDTHLLQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLPNFGSTGQPLIALPQTLQPPLQHTTAQAQAQSLSRPAQVSQPFRGLIPAGTQHSMIATTGKMSEMELKAFGSGIDIKPGTPPISGRSTTPTSSPFRATSTSPNSQSSKMNSIVYQKQFQSAPATVRMTQPFPTQFAPQILSQPNLVPPLVRAPHTNTFPAPVQRPPMALASQMPPPLTTGLMSHARLPHVARGPCGSLSGVRGNQAQAALKAEQDMKKRAVGRGLSHKTFGPRCWQSREQRFFSPRNGSSLNSNRTNR", "length": 2850, "header": "tr|A0A5G2QR40-1|A0A286ZS85_PIG Computationally mapped isoform of Proline rich coiled-coil 2C OS=Sus scrofa OX=9823 GN=PRRC2C PE=1 SV=1 CANONICAL=A0A286ZS85-1" }, "locus": { "chromosome": "9", "start_pos": 114065687, "end_pos": 113992775, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083697.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083697.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060745.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060745.1" } ] } }, { "isoform_ac": "F1S7T1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZS85/entry#F1S7T1-1", "sequence": { "sequence": "MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVPPAQPKPGVTAPPEVAPAPKSWASNKQGGQGDGIQVNSHFQQEFPSLQAAGDQEKKEKEANDDNYGPGPSLRPPNVACWRDGGKSVGSPLTSDQDEKPGQDESAAGTSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKENSSEDQDSKGSENTENRKEADEVYNTKSSSQIPAQPPVAKGPYGKGPPFNQDRGPSSHLPPPPKLLAQQHPPPDRQAAPGRPGPFPPKQQVPDEDEIWKQRRRQQSELSAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIVDKQPSPEEIREREREKEREKEREREKELEKEQEREREKEREKERERQQEKEKELEREQEKQREMEKERKQEKEKEIERQQEKEKELQVMKEQEKECELEKKEREKMEEKTEHREPTLEPMVEKPESENNCNKEDDPVFSRQDSNRSEKETTQAAHEAEPESGSQPRPAVLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQGVLPQTVPSQPSSGAVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLMRRDQVEGTPNNSESFEHIARTTRDHAISLSEPRVMWGSDTYPHTEPQQATTPKATEEPEDVRPEAPLDQEQITAAYPVEHSQLEAHPKADFIRESSETEVQKFLSRSVEDIRPHHTDTNNQSACFDVSDRKTISTPQEERISSGETQPARKRSVSHGSNHTQKSEEQRNEPSASIPKVTGRCLDSKEPAERPEEKPKKEGFIRSSEGPKPEKPYKSKSETRWGPRPGSNRREEGNDRPVRRSGPIKKPILRDMKEEREQRKEKEGEKGEKVTEKIAKPEKTEKKEPLPPPPPPVAPVQPQLVPPPPQPESEKFPSVETSTLVQKPPQDTEKALEPVSNVEVEPAAKTVNQQTVSAPTVKEEKQPEKISKDLVTERTRPDSRPAIKKESTLPPRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPQYRDSKPRTEHVPPGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPQSFKPENHVRIDNRPLEKPFVRDDDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQAEVPKPDDGEPPRRHEQFIPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVAVPTNGTVNNVVQEPVNTAGDISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLNAQVVVKAGENVLPPKREIAKRSFSSQRPGIDRQNRRGNNGPPKSGRNFSGPRNERRSGPPSKSGKRGPFDDQSAGTTGADPVNGSSAHHQEGAPNGTGQKNSKDSTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQIIQVWNKKNASEKGRSQTSKLPPRFAKKQATGTQQAQPPASALVSAPGPGSTSAPVPATTSAPVLASAPAPVLASSSAPVSAPAAVPILTSTSAALPTLASASAPVPAPASTSATATASSSVPAPTPILASVSTSASVPILTSASIPILASALAPASVPSPAVSAPTVPTSTPAAPASASTTPASLPAPTPTPAPAPAAAPTPASTLVQVPALPPAPASTAPGQTQGQIHKTVQSPLQTTTQSSKQPPPSIRLPSAQTPNGTDYVATGKSIQSSQSHGTLKTELWDNKVAPQAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSAASSEGTKNSQESGVEIGIDTIQFGAPASNGNENEIVPVLSEKTTDKMSEPKEQRQKQPRAGPIKAQKLPDLSPVENKEHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPATVRSTDPVTTKETKAVSEISTEIGTMISVSSTEYGTNVKESVTDYTTPSSSLPNTVATNNAKMEDTLVNNVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIASGVSSSASGPSTANYNSFSSASMPQIPVASVTPTTSLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSVQQIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSLQPYRSQPAFMQSNLSQPSVVLSGTAIHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGGSQLIDTHLLQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLPNFGSTGQPLIALPQTLQPPLQHTTAQAQAQSLSRPAQVSQPFRGLIPAGTQHSMIATTGKMSEMELKAFGSGIDIKPGTPPISGRSTTPTSSPFRATSTSPNSQSSKMNSIVYQKQFQSAPATVRMTQPFPTQFAPQKRAVGRGLSHKTFGPRCWQSREQRFFSPRNGSSLNSNRTNR", 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"MEAQKSSKNCSITGTEFPDPSLPLDWPDDFTLRGNKAANATNPFWNELSVSNPFLDDITQLRNNQKRNNISILKEDPLLFFREIETGNSFDSSGDELNVHQLLRQSSSRKCGRSKSVSELLDILDDTARAHQNGQNSDQILEQDLEWLQNDREAYKMAWLSQRQLARSCLDLKTINQSPGWAQTQVAETTIVCKLNHQGGSVQLPESDITVHVPQGHVAVGEFQELSLRAFLDPPQVLNHDLSCTVSPLLEIMLGNLNTMEAILLEIKIGAEVKKDPFSQVMTEIVCLHSLDKEGPFKVLNNCYIYKDTIQVKLVDLSQVMYLVIAAQTKGIQSPAMTIWDYIHKTTSIGIYGPKYIHPSFTAVFTVCGHSYMPGKLTISDIKKGGKNMSPVVFQLWGKHSFLLEKPQDLNISVFSCDPDFEVKVEGKRKEIKQKQLRSGQVVHQQFSFSLVDSREMHLFVFRVQVEPPNGRPVTQFFITTPDPAPNLKRLSDLPSDWQKEKEIKSTPLLPTVHVKYPTFQDKKLNFTNYGITLKTVLRQSKIDYLLEYFKGDRVALLGEGKVKAIGQSKVKEWYVGVLRGKIGLVHCKNIKVIAKEQVMSTSDTVFTTWNLLEQIALPFKKLTYIYSVVLTLVSEKVNDWKVLADVLGYSHLVLEDFDRIQADKESEKVSYVVKKLKEDCHTDRNTRKFLYELVVALLKIDCQGLVAHLIQEAVILTSAVKLGKGWRELAEKLVRLTKRQIEAYETPHQGKAGDVTTEMMWKPAYDFLYTWSAHYGNSYRDVLQDLQSALDRMKNPVTRQWRDLTGALILVNSLEVLRATAFSTSEEV", "length": 829, "header": "tr|A0A286ZSH9-1|A0A286ZSH9_PIG Isoform 1 of Metastasis-associated in colon cancer protein 1 OS=Sus scrofa OX=9823 GN=MACC1 PE=4 SV=1 CANONICAL=A0A286ZSH9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSH9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9/entry#A0A286ZSH9-1", "sequence": { "sequence": "MEAQKSSKNCSITGTEFPDPSLPLDWPDDFTLRGNKAANATNPFWNELSVSNPFLDDITQLRNNQKRNNISILKEDPLLFFREIETGNSFDSSGDELNVHQLLRQSSSRKCGRSKSVSELLDILDDTARAHQNGQNSDQILEQDLEWLQNDREAYKMAWLSQRQLARSCLDLKTINQSPGWAQTQVAETTIVCKLNHQGGSVQLPESDITVHVPQGHVAVGEFQELSLRAFLDPPQVLNHDLSCTVSPLLEIMLGNLNTMEAILLEIKIGAEVKKDPFSQVMTEIVCLHSLDKEGPFKVLNNCYIYKDTIQVKLVDLSQVMYLVIAAQTKGIQSPAMTIWDYIHKTTSIGIYGPKYIHPSFTAVFTVCGHSYMPGKLTISDIKKGGKNMSPVVFQLWGKHSFLLEKPQDLNISVFSCDPDFEVKVEGKRKEIKQKQLRSGQVVHQQFSFSLVDSREMHLFVFRVQVEPPNGRPVTQFFITTPDPAPNLKRLSDLPSDWQKEKEIKSTPLLPTVHVKYPTFQDKKLNFTNYGITLKTVLRQSKIDYLLEYFKGDRVALLGEGKVKAIGQSKVKEWYVGVLRGKIGLVHCKNIKVIAKEQVMSTSDTVFTTWNLLEQIALPFKKLTYIYSVVLTLVSEKVNDWKVLADVLGYSHLVLEDFDRIQADKESEKVSYVVKKLKEDCHTDRNTRKFLYELVVALLKIDCQGLVAHLIQEAVILTSAVKLGKGWRELAEKLVRLTKRQIEAYETPHQGKAGDVTTEMMWKPAYDFLYTWSAHYGNSYRDVLQDLQSALDRMKNPVTRQWRDLTGALILVNSLEVLRATAFSTSEEV", "length": 829, "header": "tr|A0A286ZSH9-1|A0A286ZSH9_PIG Isoform 1 of Metastasis-associated in colon cancer protein 1 OS=Sus scrofa OX=9823 GN=MACC1 PE=4 SV=1 CANONICAL=A0A286ZSH9-1" }, "locus": { "chromosome": "9", "start_pos": 89162480, "end_pos": 89141306, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049657.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049657.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034425.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034425.2" } ] } }, { "isoform_ac": "A0ABB5URC0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9/entry#A0ABB5URC0-1", "sequence": { "sequence": "MEAQKSSKNCSITEFPDPSLPLDWPDDFTLRGNKAANATNPFWNELSVSNPFLDDITQLRNNQKRNNISILKEDPLLFFREIETGNSFDSSGDELNVHQLLRQSSSRKCGRSKSVSELLDILDDTARAHQNGQNSDQILEQDLEWLQNDREAYKMAWLSQRQLARSCLDLKTINQSPGWAQTQVAETTIVCKLNHQGGSVQLPESDITVHVPQGHVAVGEFQELSLRAFLDPPQVLNHDLSCTVSPLLEIMLGNLNTMEAILLEIKIGAEVKKDPFSQVMTEIVCLHSLDKEGPFKVLNNCYIYKDTIQVKLVDLSQVMYLVIAAQTKGIQSPAMTIWDYIHKTTSIGIYGPKYIHPSFTAVFTVCGHSYMPGKLTISDIKKGGKNMSPVVFQLWGKHSFLLEKPQDLNISVFSCDPDFEVKVEGKRKEIKQKQLRSGQVVHQQFSFSLVDSREMHLFVFRVQVEPPNGRPVTQFFITTPDPAPNLKRLSDLPSDWQKEKEIKSTPLLPTVHVKYPTFQDKKLNFTNYGITLKTVLRQSKIDYLLEYFKGDRVALLGEGKVKAIGQSKVKEWYVGVLRGKIGLVHCKNIKVIAKEQVMSTSDTVFTTWNLLEQIALPFKKLTYIYSVVLTLVSEKVNDWKVLADVLGYSHLVLEDFDRIQADKESEKVSYVVKKLKEDCHTDRNTRKFLYELVVALLKIDCQGLVAHLIQEAVILTSAVKLGKGWRELAEKLVRLTKRQIEAYETPHQGKAGDVTTEMMWKPAYDFLYTWSAHYGNSYRDVLQDLQSALDRMKNPVTRQWRDLTGALILVNSLEVLRATAFSTSEEV", "length": 827, "header": "tr|A0ABB5URC0-1|A0ABB5URC0_PIG Computationally mapped isoform of Metastasis-associated in colon cancer protein 1 OS=Sus scrofa OX=9823 GN=MACC1 PE=4 SV=1 CANONICAL=A0A286ZSH9-1" }, "locus": { "chromosome": "9", "start_pos": 89162480, "end_pos": 89141306, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107118.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107118.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081512.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081512.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSH9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSH9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSH9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSH9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 176, "end_pos": 178, "annotation": "n_glycosylation_sequon" }, { "start_pos": 388, "end_pos": 390, "annotation": "n_glycosylation_sequon" }, { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" }, { "start_pos": 411, "end_pos": 413, "annotation": "n_glycosylation_sequon" }, { "start_pos": 526, "end_pos": 528, "annotation": "n_glycosylation_sequon" }, { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" }, { "start_pos": 9, "end_pos": 11, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZSH9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 829, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZSH9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZSH9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZSH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9" }, { "id": "PS50002", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH3", "eco_id": "ECO_0000259", "start_pos": 526, "end_pos": 596, "start_aa": "Asn", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZSH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSH9" }, { "id": "PS51145", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51145" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ZU5", "eco_id": "ECO_0000259", "start_pos": 189, "end_pos": 326, "start_aa": "Thr", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 176, "end_pos": 178 }, { "start_pos": 388, "end_pos": 390 }, { "start_pos": 39, "end_pos": 41 }, { "start_pos": 411, "end_pos": 413 }, { "start_pos": 526, "end_pos": 528 }, { "start_pos": 69, "end_pos": 71 }, { "start_pos": 9, "end_pos": 11 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZSI0-1", "uniprot_ac": "A0A286ZSI0", "uniprot_id": "A0A286ZSI0_PIG", "mass": { "chemical_mass": 94941.0, "monoisotopic_mass": 94941.0 }, "refseq": { "ac": "XP_020939711", "name": "semaphorin-6B isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939711" }, "gene_names": [ { "name": "SEMA6B", "type": "recommended", "evidence": [ { "id": "A0A286ZSI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ] }, { "name": "SEMA6B", "type": "synonym", "evidence": [ { "id": "XP_020939711", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939711" } ] } ], "protein_names": [ { "name": "Semaphorin-6B", "type": "recommended", "evidence": [ { "id": "A0A286ZSI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0/entry#names_and_taxonomy" } ] }, { "name": "semaphorin-6B isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020939711", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939711" } ] } ], "function": [ { "annotation": "Functions as a cell surface repellent for mossy fibers of developing neurons in the hippocampus where it plays a role in axon guidance. May function through the PLXNA4 receptor expressed by mossy cell axons.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0#function" }, { "database": "UniProtKB", "id": "ARBA00056706", "url": "https://www.uniprot.org/uniprotkb/ARBA00056706#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SEMA6B", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0", "locus": { "chromosome": "2", "start_pos": 74296385, "end_pos": 74258439, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000035176", "url": "https://www.ensembl.org/id/ENSSSCG00000035176" } ] } } ], "crossref": [ { "id": "A0A286ZSI0", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZSI0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000035176", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000035176", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11267", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11267", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "110259360", "url": "https://www.ncbi.nlm.nih.gov/gene/110259360", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001627", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001627", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002165", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002165", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027231", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027231", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036352", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036352", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "DHMRGDH", "url": "https://omabrowser.org/oma/group/DHMRGDH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11036", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11036", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11036:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11036:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01403", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01403", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01437", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01437", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939711", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939711", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSI0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQTLRALSPCPALLLLLLLLGGARGLFPEEPPPLSVAPRDYLNHYPVFVGSGPGRLTPAEGADDLNIQRVLRVNRTLFIGDRDNLYRVELEPPTSTELRYQRKLTWPSNPSDINVCRMKGKQEGECRNFVKVLLLRDESTLFVCGSNAFNPVCANYSMDTLQPLGDNISGMARCPYDPKHANVALFSEGMLFTATVTDFLAIDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLRAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDEAVPSLGHAPWIVRTLMRHQLTRVAVDVGAGPWGNQTVVFLGSEVGTVLKFLVWPNASTSGTTGPSVFLEEFETYRPDRCGRSGGGVETGQRLLSLELDVASGGLLAAFPRCVVRVPVARCQQYSGCMKNCIGSQDPYCGWAPDGSCIFLSPGTRATFEQDVSGASTSGLGDCTGLLRASLSEERAGLVSVNLLVTSSVAAFVVGAVVSGFSVGWYVGLRERRELARRKDKEAILAHGGGEAVLSVSRLGERRAGGPGGRSGSGAGGPGGPPEALLAPLMQNGWAKATLLQGGPHDLDSGLLPTPEQTPLPQKRLPTPHPHALGPRAWEHGHGHALLTASASSSLLLLAPARAPEPPPAPGEPAPDARLFTARPGRASHGDFPLTPHASPDRRRVVSAPTGPSDPSSASDGLPRPWSPPPTGSLRRPGTHGPPAAALRRTHTINSGEARPRGRHARPSTDLAHLLSYGGPDRTAPPVP", "length": 884, "header": "tr|A0A286ZSI0-1|A0A286ZSI0_PIG Isoform 1 of Semaphorin-6B OS=Sus scrofa OX=9823 GN=SEMA6B PE=3 SV=1 CANONICAL=A0A286ZSI0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSI0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0/entry#A0A286ZSI0-1", "sequence": { "sequence": 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GN=SEMA6B PE=3 SV=1 CANONICAL=A0A286ZSI0-1" }, "locus": { "chromosome": "2", "start_pos": 74295478, "end_pos": 74285087, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063984.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063984.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042128.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042128.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "O54951-1", "protein_name": "Semaphorin-6B", "gene_name": "Sema6b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O70141-1", "protein_name": "Semaphorin-6B", "gene_name": "Sema6b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWTPRAPPPRPALLFLLLLLLRVTHGLFPDEPPPLSVAPRDYLSHYPVFVGSGPGRLTPAEGAEDLNIQRVLRVNRTLFIGDRDNLYQVELEPSTSTELRYQRKLTWRSNPSDIDVCRMKGKQEGECRNFVKVLLLRDESTLFVCGSNAFNPICANYSMDTLQLLGDNISGMARCPYDPKHANVALFSDGMLFTATVTDFLAIDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASNALPDEILNFVKTHPLMDEAVPSLGHSPWIVRTLIRHQLTRVAVDVGAGPWGNQTIVFLGSEVGTVLKFLVKPNASVSGTTGPSIFLEEFETYRPDRCGRSSSAGEWGQRLLSLELDAASGGLLAAFPRCVVRVPVARCQLYSGCMKNCIGSQDPYCGWAPDGSCIFLRPGTSATFEQDVSGASTSGLGDCTGLLRASLSDDRAGLVSVNLLVTSSVAAFVVGAVVSGFSVGWFVGLRERRELARRKDKEAILAHGGSEAVLSVSRLGERRGTGTGGRGGAGGGPGGPPEALLAPLMQNGWTKAALLHGGPHDLDSGLLPTPEQTPLPQKRLPTTHPHAHALGPRAWDHSHALLSASASTSLLLLAHTRAPEQPPVPTESGPESRLCAPRSCRASHPGDFPLTPHASPDRRRVVSAPTGPLDSSSVGDDLPGPWSPPATSSLRRPGPHGPPTAALRRTHTFNSGEARPGGHRPRRHAPADSTHLLPCGTGERTAPPVP", "length": 887 }, "evidence": [ { "id": "A0A286ZSI0", "url": "https://omabrowser.org/oma/group/A0A286ZSI0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9H3T3-1", "protein_name": "Semaphorin-6B", "gene_name": "SEMA6B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "semaphorin receptor binding", "id": "GO:0030215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030215", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "pmid": "" }, { "name": "chemorepellent activity", "id": "GO:0045499", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045499", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "positive regulation of cell migration", "id": "GO:0030335", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030335", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "pmid": "" }, { "name": "semaphorin-plexin signaling pathway", "id": "GO:0071526", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071526", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "pmid": "" }, { "name": "hippocampus development", "id": "GO:0021766", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0021766", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSI0" } ], "pmid": "" }, { "name": "neural crest cell migration", "id": "GO:0001755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001755", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSI0", "url": 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"https://www.ncbi.nlm.nih.gov/protein/XP_003135486" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A286ZSK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSK5/entry#names_and_taxonomy" } ] }, { "name": "spermatid nuclear transition protein 4", "type": "synonym", "evidence": [ { "id": "XP_003135486", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003135486" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSK5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSK5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSK5", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000032608", 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Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP (Sm core). In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the chaperone CLNS1A that controls the assembly of the core snRNP. To assemble core snRNPs, the SMN complex accepts the trapped 5Sm proteins from CLNS1A forming an intermediate. Binding of snRNA inside 5Sm triggers eviction of the SMN complex, thereby allowing binding of SNRPD3 and SNRPB to complete assembly of the core snRNP.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9#function" }, { "database": "UniProtKB", "id": "ARBA00059373", "url": "https://www.uniprot.org/uniprotkb/ARBA00059373#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GEMIN7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9", "locus": { "chromosome": "6", "start_pos": 51520954, "end_pos": 51507437, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000033194", "url": "https://www.ensembl.org/id/ENSSSCG00000033194" } ] } } ], "crossref": [ { "id": "ENSSSCG00000033194", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033194", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11677", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11677", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100627643", "url": "https://www.ncbi.nlm.nih.gov/gene/100627643", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR020338", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020338", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024642", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024642", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627643", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627643", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CADIISY", "url": "https://omabrowser.org/oma/group/CADIISY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZSN9", "url": "https://www.orthodb.org/?gene=A0A286ZSN9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14679", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14679", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14679:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14679:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11095", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11095", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-191859", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-191859", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020950183", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020950183", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQTPLAIPVPVLRLPRGPDGLSRGFAPDARRGLLKPQVPETPESPVVQESQESQEQQARAALRERYLRSLLAMVGRQVSFTLHEGVQVTAHFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIIAYAFKL", "length": 131, "header": "tr|A0A286ZSN9-1|A0A286ZSN9_PIG Isoform 1 of Gem-associated protein 7 OS=Sus scrofa OX=9823 GN=GEMIN7 PE=1 SV=1 CANONICAL=A0A286ZSN9-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9/entry#A0A286ZSN9-1", "sequence": { "sequence": "MQTPLAIPVPVLRLPRGPDGLSRGFAPDARRGLLKPQVPETPESPVVQESQESQEQQARAALRERYLRSLLAMVGRQVSFTLHEGVQVTAHFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIIAYAFKL", "length": 131, "header": "tr|A0A286ZSN9-1|A0A286ZSN9_PIG Isoform 1 of Gem-associated protein 7 OS=Sus scrofa OX=9823 GN=GEMIN7 PE=1 SV=1 CANONICAL=A0A286ZSN9-1" }, "locus": { "chromosome": "6", "start_pos": 51520544, "end_pos": 51520152, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053968.2", "url": "https://www.ensembl.org/id/ENSSSCT00000053968.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035295.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035295.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627643", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627643", "resource": "KEGG Pathway" }, { "id": "R-SSC-191859", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-191859", "resource": "Reactome", "description": "snRNP Assembly" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AGJ9-1", "protein_name": "Gem-associated protein 7", "gene_name": "Gemin7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQSLPIIPVPVPVLRLPRGPDGFSRGFAPDGRRTILRPEVGEGRIQDPPESQEQRARAALRERYLRSLLAMVGHPVSFTLHEGVHVTAQFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIISYSFKL", "length": 129 }, "evidence": [ { "id": "A0A286ZSN9", "url": "https://omabrowser.org/oma/group/A0A286ZSN9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0Y3Y1-1", "protein_name": "Gem nuclear organelle associated protein 7", "gene_name": "GEMIN7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MANVREANTPPTGPMAVPVSVLRLPRGPDGSGRGFGPSTQRPRRDPPPEVTEATRAIQRARAALRRRFLLCLVAARGQRVTFVLCQRVRVNAVLGAAWVPGGTEGGGSDGGAAVAFQVDALQTPLGVQKAALLRGGDVVAFGFQVGGK", "length": 148 }, "evidence": [ { "id": "A0A286ZSN9", "url": "https://omabrowser.org/oma/group/A0A286ZSN9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1R879-1", "protein_name": "Gem-associated protein 7", "gene_name": "gemin7", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTPVGVLRLPRGPEPNSRGFDPNSPRFQALCPTSLTSSSSSSSVDVEEQRLRAEQREHFLRTLLLMTDKRVDFQLLEKLRMRGRFGASDIDVLNFQVSDLETPLGVQKEALLRCHDIISCSFEL", "length": 125 }, "evidence": [ { "id": "A0A286ZSN9", "url": "https://omabrowser.org/oma/group/A0A286ZSN9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q17QA0-1", "protein_name": "Gem-associated protein 7", "gene_name": "GEMIN7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQTPLATPVPVLRLPRGPDGSNRGFAPDGRRAPPKPEVPEPPESRESWEQQARASLRERYLRSLLAMVGRPVCFTLHEGVQVIAHFGATDLDVANFYVSQLQTPIGIQAEALLRCSDIISYTFKP", "length": 125 }, "evidence": [ { "id": "A0A286ZSN9", "url": "https://omabrowser.org/oma/group/A0A286ZSN9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9CWY4-1", "protein_name": "Gem-associated protein 7", "gene_name": "Gemin7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQSPLTIPVPVPVLRLPRGPDGFSRGFASDGRRTILRPEVGEGHIQDPPESQEQRARATLRERYLRSLLAMVGHPVSFTLHEGVHVTAQFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIISYSFKL", "length": 129 }, "evidence": [ { "id": "A0A286ZSN9", "url": "https://omabrowser.org/oma/group/A0A286ZSN9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H840-1", "protein_name": "Gem-associated protein 7", "gene_name": "GEMIN7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQTPVNIPVPVLRLPRGPDGFSRGFAPDGRRAPLRPEVPEIQECPIAQESLESQEQRARAALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIISYTFKP", "length": 131 }, "evidence": [ { "id": "A0A286ZSN9", "url": "https://omabrowser.org/oma/group/A0A286ZSN9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "pmid": "" }, { "name": "SMN complex", "id": "GO:0032797", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032797", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "pmid": "" }, { "name": "Gemini of Cajal bodies", "id": "GO:0097504", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097504", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "pmid": "" }, { "name": "Sm-like protein family complex", "id": "GO:0120114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120114", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "spliceosomal snRNP assembly", "id": "GO:0000387", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000387", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSN9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZSN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" }, { "id": "PS51938", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51938" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SUZ-C", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 29, "start_aa": "Met", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZSN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSN9" }, { "id": "PS52002", "database": "PROSITE", "url": "https://prosite.expasy.org/PS52002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sm", "eco_id": "ECO_0000259", "start_pos": 65, "end_pos": 131, "start_aa": "Arg", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], 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"sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000006418", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006418", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08305", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08305", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR004020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004021", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011029", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011029", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012340", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012340", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040205", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040205", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FIYYEIR", "url": "https://omabrowser.org/oma/group/FIYYEIR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12200", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12200", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12200:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12200:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02760", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02760", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZSP8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ACP6", "url": "https://www.uniprot.org/uniprotkb/A0A287ACP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ACP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ACP6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARI8", "url": "https://www.uniprot.org/uniprotkb/A0A287ARI8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARI8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARI8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6E4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6E4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6E4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6E4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BMV8", "url": "https://www.uniprot.org/uniprotkb/A0A287BMV8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BMV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BMV8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQM3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQM3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQM3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQM3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTL6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTL6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTL6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKKNKTTETNESKRRKLTQEESQLPGTSRQLLESATSTQSTESLFQTLQTPAPTPSRISSTKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKISSLPSNSKCSPDTQKWCRPLGRQEKPRLKVVPKEASKEDGFHSGPKEVMVLKAMQPFTYDVRDGERKMFHATVATENQFFQVKVFHVALKEKFIPKKIIAISDYYGRNGFLELYSASSVSEVNTDRKMEISKSLIQKANATPKISDLYLQTLGTFVSGVYLVHKKLVCNECLYYEIQDKTGVMEVLVYGRLTSVYCEEGDKLRLTCFELALSGEKRQLRSVIHSFIKVIKARPASGVPVAAQWLTNPTRNHEVAGSVPALAQWVNDPTLP", "length": 585, "header": "tr|A0A286ZSP8-1|A0A286ZSP8_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZSP8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8/entry#A0A286ZSP8-1", "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKKNKTTETNESKRRKLTQEESQLPGTSRQLLESATSTQSTESLFQTLQTPAPTPSRISSTKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKISSLPSNSKCSPDTQKWCRPLGRQEKPRLKVVPKEASKEDGFHSGPKEVMVLKAMQPFTYDVRDGERKMFHATVATENQFFQVKVFHVALKEKFIPKKIIAISDYYGRNGFLELYSASSVSEVNTDRKMEISKSLIQKANATPKISDLYLQTLGTFVSGVYLVHKKLVCNECLYYEIQDKTGVMEVLVYGRLTSVYCEEGDKLRLTCFELALSGEKRQLRSVIHSFIKVIKARPASGVPVAAQWLTNPTRNHEVAGSVPALAQWVNDPTLP", "length": 585, "header": "tr|A0A286ZSP8-1|A0A286ZSP8_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZSP8-1" }, "locus": { "chromosome": "4", "start_pos": 91393667, "end_pos": 91375100, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060601.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060601.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034497.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034497.1" } ] } }, { "isoform_ac": "A0A287ACP6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8/entry#A0A287ACP6-1", "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKKNKTTETNESKRRKLTQEESQLPGTSRQLLESATSTQSTESLFQTLQTPAPTPSRISSTKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKKPRLKVVPKEASKEDGFHSGPKEVMVLKAMQPFTYDVRDGERKMFHATVATENQFFQVKVFHVALKEKFIPKKIIAISDYYGRNGFLELYSASSVSEVNTDRKMEISKSLIQKANATPKISDLYLQTLGTFVSGVYLVHKVSPPSFCNISSATPECESLSHQVNLVNFMNTGTQSPTDRG", "length": 494, "header": "tr|A0A287ACP6-1|A0A287ACP6_PIG Computationally mapped isoform of Gamma-interferon-inducible protein 16 OS=Sus scrofa OX=9823 GN= PE=1 SV=2 CANONICAL=A0A286ZSP8-1" }, "locus": { "chromosome": "4", "start_pos": 91393667, "end_pos": 91384816, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059828.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059828.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041586.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041586.2" } ] } }, { "isoform_ac": "A0A287ARI8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8/entry#A0A287ARI8-1", "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKISSLPSNSKCSPDTQKWCRPLGRQEKPRLKVVPKEASKEDGFHSGPKEVMVLKAMQPFTYDVRDGERKMFHATVATENQFFQVKVFHVALKEKFIPKKIIAISDYYGRNGFLELYSASSVSEVNTDRKMEISKSLIQKANATPKISDLYLQTLGTFVSGVYLVHKKLVCNECLYYEIQDKTGVMEVLVYGRLTSVYCEEGDKLRLTCFELALSGEKRQLRSVIHSFIKVIKAR", "length": 487, "header": "tr|A0A287ARI8-1|A0A287ARI8_PIG Computationally mapped isoform of Interferon-activable protein 203 OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZSP8-1" }, "locus": { "chromosome": "4", "start_pos": 91393667, "end_pos": 91375529, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051235.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051235.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046518.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046518.1" } ] } }, { "isoform_ac": "A0A287B6E4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8/entry#A0A287B6E4-1", "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKKNKTTETNESKRRKLTQEESQLPGTSRQLLESATSTQSTESLFQTLQTPAPTPSRISSTKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKKPRLKVVPKEASKEDGFHSGPKEVMVLKAMQPFTYDVRDGERKMFHATVATENQFFQVKVFHVALKEKFIPKKIIAISDYYGRNGFLELYSASSVSEVNTDRKMEISKSLIQKANATPKISDLYLQTLGTFVSGVYLVHKKLVCNECLYYEIQDKTGVMEVLVYGRLTSVYCEEGDKLRLTCFELALSGEKRQLRSVIHSFIKVIKAR", "length": 522, "header": "tr|A0A287B6E4-1|A0A287B6E4_PIG Computationally mapped isoform of Interferon-activable protein 203 OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZSP8-1" }, "locus": { "chromosome": "4", "start_pos": 91393667, "end_pos": 91375529, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045690.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045690.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051668.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051668.1" } ] } }, { "isoform_ac": "A0A287BMV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8/entry#A0A287BMV8-1", "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKKNKTTETNESKRRKLTQEESQLPGTSRQLLESATSTQSTESLFQTLQTPAPTPSRISSTKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKISSLPSNSKCSPDTQKWCRPLGRQEKLVCNECLYYEIQDKTGVMEVLVYGRLTSVYCEEGDKLRLTCFELALSGEKRQLRSVIHSFIKVIKARPASGVPVAAQWLTNPTRNHEVAGSVPALAQWVNDPTLP", "length": 445, "header": "tr|A0A287BMV8-1|A0A287BMV8_PIG Computationally mapped isoform of Pyrin domain-containing protein OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZSP8-1" }, "locus": { "chromosome": "4", "start_pos": 91393667, "end_pos": 91375100, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062754.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062754.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057841.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057841.1" } ] } }, { "isoform_ac": "A0A5G2QQM3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8/entry#A0A5G2QQM3-1", "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKKNKTTETNESKRRKLTQEESQLPGTSRQLLESATSTQSTESLFQTLQTPAPTPSRISSTKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKISSLPSNSKCSPDTQKWCRPLGRQEKPRLKVVPKEASKEDGFHSGPKEVMVLKAMQPFTYDVRDGERKMFHATVATENQFFQVKVFHVALKEKFIPKKIIAISDYYGRNGFLELYSASSVSEVNTDRKMEISKSLIQKANATPKISDLYLQTLGTFVSGVYLVHKKLVCNECLYYEIQDKTGVMEVLVYGRLTSVYCEEGDKLRLTCFELALSGEKRQLRSVIHSFIKVRTSGGPLPIF", "length": 553, "header": "tr|A0A5G2QQM3-1|A0A286ZSP8_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZSP8-1" }, "locus": { "chromosome": "4", "start_pos": 91393667, "end_pos": 91381601, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082241.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082241.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067038.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067038.1" } ] } }, { "isoform_ac": "A0A5G2QTL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSP8/entry#A0A5G2QTL6-1", "sequence": { "sequence": "MGNEFKRIVLLKGFQHMDDYHFKMIKSLLAHDLRLTRKMQEEYDRIKIADLMEERFRGAACVDKLIELVKGIDDIKHLVKPLQKEKLKVLRRLNAKETASAKKRKQNESSTDESTSATNEASGSESTKNTPMKKNKTTETNESKRRKLTQEESQLPGTSRQLLESATSTQSTESLFQTLQTPAPTPSRISSTKEKKDTTTKANDFKKKVSHKQSQLPGTSAASACPTQSSYQMMQMCLPAPSTSSSVKEEEKKCMFLLKKEGTTTKTVDSSRMKRPPVQSQHPQLSTYSMYSTEACLQMPQMLSPTPASSPLAKISSLPSNSKCSPDTQKWCRPLGRQEKPRLKVVPKEASKEDGFHSGPKEVMVLKAMQPFTYDVRDGERKMFHATVATENQFFQVKVFHVALKEKFIPKKIIAISDYYGRNGFLELYSASSVSEVNTDRKMEISKSLIQKANATPKISDLYLQTLGTFVSGVYLVHKKLVCNECLYYEIQDKTGVMEVLVYGRLTSVYCEEGDKLRLTCFELALSGEKRQLRSVIHSFIKAILTDVR", "length": 549, "header": "tr|A0A5G2QTL6-1|A0A286ZSP8_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=A0A286ZSP8-1" }, "locus": { "chromosome": "4", "start_pos": 91393667, "end_pos": 91381723, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086760.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086760.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061495.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061495.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 185, "start_aa": "Thr", "end_pos": 185, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr185", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 306, "start_aa": "Thr", "end_pos": 306, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr306", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQM3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQM3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "O35368-1", "protein_name": "Interferon-activable protein 203", "gene_name": "Ifi203", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEYKNIVLLKGLENMEDYQFRTVKSLLRKELKLTKKMQEDYDRIQLADWMEDKFPKDAGLDKLIKVCEHIKDLKDLAKKLKTEKAKVQEKKKGKCKTAGKKKGQDELSSSESLFINKESYKSVPSSKKKRKQITKTEGGKKKKLTQEQAQLPETSGTNIKKEEDCLQNPHKSPPTPSSSSSNKAPRRGTVPKEPSREEGHHQGPKQVMVLKVTEPFTYDFEETKRMFHATVATETEFFRVKVFDTALMSKFIPGKIIAISHYIGCNGFLEIYRASCVSDVNINPTMIISNTLSESAIATPKISYLLSQAKGTFVNGEFVVFKKSERHECICYGIGDDTGKMAVVVYGRLTNVRCEPGSKLRLVCFELTSTKDVCLLRSVRHSYMQVINEGKPLNPDSVRRNSLEPYF", "length": 408 }, "evidence": [ { "id": "A0A286ZSP8", "url": "https://omabrowser.org/oma/group/A0A286ZSP8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q16666-1", "protein_name": "Gamma-interferon-inducible protein 16", "gene_name": "IFI16", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKFRGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVKTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQTQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIINRAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPCEEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSEASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIGPAESHPHTPQMPPSTPSSSFLTTKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIGPAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYEPKEQKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVADVNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTGKMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILNPDSSMETSPDFFF", "length": 785 }, 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A286ZSS2-1", "uniprot_ac": "A0A286ZSS2", "uniprot_id": "A0A286ZSS2_PIG", "mass": { "chemical_mass": 17913.0, "monoisotopic_mass": 17913.0 }, "refseq": {}, "gene_names": [ { "name": "C16H5orf47", "type": "recommended", "evidence": [ { "id": "A0A286ZSS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSS2" } ] }, { "name": "C5orf47", "type": "synonym", "evidence": [ { "id": "A0A286ZSS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSS2" } ] } ], "protein_names": [ { "name": "Chromosome 16 C5orf47 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"https://www.ebi.ac.uk/interpro/entry/IPR031464", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR38655", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR38655", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR38655:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR38655:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15730", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15730", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZSS2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSS2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSS2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSS2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAKGREQEGNRSRFVYVTRFGSHQCGGVLQLGGRRALGPWSPGFGAGRRQAGARAVAAGTPGGTEPPAGSRPRSPEASSPARASNVRSRSRPTAGGGLTQKNLAKKFDFPVPLNEASKIMKKKKKVSVWNGVYKVISKMLEENEKYRLRLKCQQLSRENSNCTR", "length": 165, "header": "tr|A0A286ZSS2-1|A0A286ZSS2_PIG Isoform 1 of Chromosome 16 C5orf47 homolog OS=Sus scrofa OX=9823 GN=C16H5orf47 PE=4 SV=2 CANONICAL=A0A286ZSS2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSS2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSS2/entry#A0A286ZSS2-1", "sequence": { "sequence": "MAAKGREQEGNRSRFVYVTRFGSHQCGGVLQLGGRRALGPWSPGFGAGRRQAGARAVAAGTPGGTEPPAGSRPRSPEASSPARASNVRSRSRPTAGGGLTQKNLAKKFDFPVPLNEASKIMKKKKKVSVWNGVYKVISKMLEENEKYRLRLKCQQLSRENSNCTR", "length": 165, "header": "tr|A0A286ZSS2-1|A0A286ZSS2_PIG Isoform 1 of Chromosome 16 C5orf47 homolog OS=Sus scrofa OX=9823 GN=C16H5orf47 PE=4 SV=2 CANONICAL=A0A286ZSS2-1" }, "locus": { "chromosome": "16", "start_pos": 50400163, "end_pos": 50387619, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056255.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056255.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034516.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034516.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 61, "start_aa": "Thr", "end_pos": 61, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr61", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSS2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSS2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" }, { "start_pos": 162, "end_pos": 164, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR39063", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR39063:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR39063:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16045", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16045", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020936556", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936556", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZSU5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B832", "url": "https://www.uniprot.org/uniprotkb/A0A287B832", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B832-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B832-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQSTMPPKSDVLSQDELRKKLYQTFKDHGILDTLKTELRNHLIHELMHPALSGPHPLKPPSIAVEGSVLLIGASNSLVADHLRRCGYEYSLSVFFPESGLAQEKVFTMQDLLQLIKINPESSLYKSLISGFDKGNQKGFLMQFLKEMAEYHQTKASCNMETQTDSALPIKDSLAEKLQLIDDEFAGAHPQHPQLESLEVKLNEYKRELEQQLQAEMCEKLKHFKDTEIAKIKMEEKRKCEKELTDFRNKHERTYQAKSEALISREKMTLERIQKHQENEMKEIYAQRQLLLKDIDLLRGREAELKQRIEAFELSQRLQEEKNKNVTHGLWRQELNIQSMEETYDQKLKNKLLKYQLELKEDYITRTNRLIEDERRNTEKTIHLQEELRAFKCRKEEFDRSVNRVKELELELESVKAQCLALTKQNHMLSEKVKEMSDYSLVKEGKLELQTQNKLLKQQVEELRNENLRLLNCITEPSPELVIFQKELKKAENAIMLEHKELETHKQALQKQLQSEIEHSAQLKAQILDYDASVKRLTMQVTDLKLQLKQTQTALENEVYRNPKPSLLSRSVSRLMGGKMGPLDGSISRDFLKNALRQDELLAGTVTPWIPSYPSASPEGSSPDSDLEFVASTKARVRELEQEAKCLEKAFQNYHQRVSQCPAKSPLEARSPPLLRLLGNLKNILPSAPDRGVFPEDQVASQQPQMSEQRKDNSEVSEVTSSSASRSHKGEASRCLSSTSLPKARRSLDSEMFLEGDRTLQPSPAECWHSLSVHSLSSPMEPKASLYQRQMELEKNQFANSDKPAFKDNEESEASFEYVGNTPRQLEMDGCLPTGNMPHMDSAAAALHTRAVSCQYPSVDPKPLGEQKDEEEIWEQQARELRQGGEGRHIEQQEALERGRRELEKLDQERRLIEESLKMEMEKEFEVLSLQEMKDKSKSICGENPLEKYMQVLQQDKDQDLADKSSKKMAREGSQVDTLPSSDKDESFTGFSPEEPDDSW", "length": 1000, "header": "tr|A0A286ZSU5-1|A0A286ZSU5_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A286ZSU5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5/entry#A0A286ZSU5-1", "sequence": { "sequence": "MAQSTMPPKSDVLSQDELRKKLYQTFKDHGILDTLKTELRNHLIHELMHPALSGPHPLKPPSIAVEGSVLLIGASNSLVADHLRRCGYEYSLSVFFPESGLAQEKVFTMQDLLQLIKINPESSLYKSLISGFDKGNQKGFLMQFLKEMAEYHQTKASCNMETQTDSALPIKDSLAEKLQLIDDEFAGAHPQHPQLESLEVKLNEYKRELEQQLQAEMCEKLKHFKDTEIAKIKMEEKRKCEKELTDFRNKHERTYQAKSEALISREKMTLERIQKHQENEMKEIYAQRQLLLKDIDLLRGREAELKQRIEAFELSQRLQEEKNKNVTHGLWRQELNIQSMEETYDQKLKNKLLKYQLELKEDYITRTNRLIEDERRNTEKTIHLQEELRAFKCRKEEFDRSVNRVKELELELESVKAQCLALTKQNHMLSEKVKEMSDYSLVKEGKLELQTQNKLLKQQVEELRNENLRLLNCITEPSPELVIFQKELKKAENAIMLEHKELETHKQALQKQLQSEIEHSAQLKAQILDYDASVKRLTMQVTDLKLQLKQTQTALENEVYRNPKPSLLSRSVSRLMGGKMGPLDGSISRDFLKNALRQDELLAGTVTPWIPSYPSASPEGSSPDSDLEFVASTKARVRELEQEAKCLEKAFQNYHQRVSQCPAKSPLEARSPPLLRLLGNLKNILPSAPDRGVFPEDQVASQQPQMSEQRKDNSEVSEVTSSSASRSHKGEASRCLSSTSLPKARRSLDSEMFLEGDRTLQPSPAECWHSLSVHSLSSPMEPKASLYQRQMELEKNQFANSDKPAFKDNEESEASFEYVGNTPRQLEMDGCLPTGNMPHMDSAAAALHTRAVSCQYPSVDPKPLGEQKDEEEIWEQQARELRQGGEGRHIEQQEALERGRRELEKLDQERRLIEESLKMEMEKEFEVLSLQEMKDKSKSICGENPLEKYMQVLQQDKDQDLADKSSKKMAREGSQVDTLPSSDKDESFTGFSPEEPDDSW", "length": 1000, "header": "tr|A0A286ZSU5-1|A0A286ZSU5_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A286ZSU5-1" }, "locus": { "chromosome": "Y", "start_pos": 10444425, "end_pos": 10385958, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056762.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056762.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034541.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034541.1" } ] } }, { "isoform_ac": "A0A287B832-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5/entry#A0A287B832-1", "sequence": { "sequence": "MAQSTMPPKSDVLSQDELRKKLYQTFKDHGILDTLKTELRNHLIHELMHPALSGPHPLKPPSIAVEGSVLLIGASNSLVADHLRRCGYEYSLSVFFPESGLAQEKISGFDKGNQKGFLMQFLKEMAEYHQTKASCNMETQTDSALPIKDSLAEKLQLIDDEFAGAHPQHPQLESLEVKLNEYKRELEQQLQAEMCEKLKHFKDTEIAKIKMEEKRKCEKELTDFRNKHERTYQAKSEALISREKMTLERIQKHQENEMKEIYAQRQLLLKDIDLLRGREAELKQRIEAFELSQRLQEEKNKNVTHGLWRQELNIQSMEETYDQKLKNKLLKYQLELKEDYITRTNRLIEDERRNTEKTIHLQEELRAFKCRKEEFDRSVNRVKELELELESVKAQCLALTKQNHMLSEKVKEMSDYSLVKEGKLELQTQNKLLKQQVEELRNENLRLLNCITEPSPELVIFQKELKKAENAIMLEHKELETHKQALQKQLQSEIEHSAQLKAQILDYDASVKRLTMQVTDLKLQLKQTQTALENEVYRNPKPSLLSRSVSRLMGGKMGPLDGSISRDFLKNALRQDELLAGTVTPWIPSYPSASPEGSSPDSDLEFVASTKARVRELEQEAKCLEKAFQNYHQRVSQCPAKSPLEARSPPLLRLLGNLKNILPSAPDRGVFPEDQVASQQPQMSEQRKDNSEVSEVTSSSASRSHKGEASRCLSSTSLPKARRSLDSEMFLEGDRTLQPSPAECWHSLSVHSLSSPMEPKASLYQRQMELEKNQFANSDKPAFKDNEESEASFEYVGNTPRQLEMDGCLPTGNMPHMDSAAAALHTRAVSCQYPSVDPKPLGEQKDEEEIWEQQARELRQGGEGRHIEQQEALERGRRELEKLDQERRLIEESLKMEMEKEFEVLSLQEMKDKSKSICGENPLEKYMQVLQQDKDQDLADKSSKKMAREGSQVDTLPSSDKDESFTGFSPEEPDDSW", "length": 977, "header": "tr|A0A287B832-1|A0A287B832_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A286ZSU5-1" }, "locus": { "chromosome": "Y", "start_pos": 10444425, "end_pos": 10385958, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056752.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056752.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052684.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052684.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [], "pathway": [ { "id": "ssc:110255257", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110255257", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSU5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5" } ], "pmid": "" }, { "name": "motile cilium", "id": "GO:0031514", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031514", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSU5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSU5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSU5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSU5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 325, "end_pos": 327, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 325, "end_pos": 327 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }, { "uniprot_canonical_ac": "A0A286ZSV4-1", "uniprot_ac": "A0A286ZSV4", "uniprot_id": "A0A286ZSV4_PIG", "mass": { "chemical_mass": 66909.0, "monoisotopic_mass": 66909.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF496", "type": "recommended", "evidence": [ { "id": "A0A286ZSV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ] } ], "protein_names": [ { "name": "Zinc finger protein 496", "type": "recommended", "evidence": [ { "id": "A0A286ZSV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4/entry#names_and_taxonomy" } ] }, { "name": "Zinc finger protein with KRAB and SCAN domains 17", "type": "synonym", "evidence": [ { "id": "A0A286ZSV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "DNA-binding transcription factor that can both act as an activator and a repressor.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4#function" }, { "database": "UniProtKB", "id": "ARBA00059498", "url": "https://www.uniprot.org/uniprotkb/ARBA00059498#function" }, { "database": "UniProtKB", "id": "A0A287ASC6", "url": "https://www.uniprot.org/uniprotkb/A0A287ASC6#function" }, { "database": "UniProtKB", "id": "A0A5G2QNP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNP2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF496", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4", "locus": { "chromosome": "2", "start_pos": 57097828, "end_pos": 57053652, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000036756", "url": "https://www.ensembl.org/id/ENSSSCG00000036756" } ] } } ], "crossref": [ { "id": "A0A286ZSV4", "url": "https://alphafold.ebi.ac.uk/entry/A0A286ZSV4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000036756", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036756", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07936", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07936", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100518601", "url": "https://www.ncbi.nlm.nih.gov/gene/100518601", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003309", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003309", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038269", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038269", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518601", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518601", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PWEIQSW", "url": "https://omabrowser.org/oma/group/PWEIQSW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QNP2", "url": "https://www.orthodb.org/?gene=A0A5G2QNP2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23226", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23226", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23226:SF180", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23226:SF180", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZSV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASC6", "url": "https://www.uniprot.org/uniprotkb/A0A287ASC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ASC6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNP2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGELPNPESSRRLFRRFCYQEAAGPQEALHRLWDLCRGWLRPERHTKEQILELLVLEQFLAILPREIQGWVRAQEPESGDQAVAAVEALEREPGRPWQWLKHCEDPVVIDDADSPPDQEQERLPSEPQSDLAKSLDTQPMALAQGPGLPSRLSGQLSGDPVLQDTSLLQEASLRDAQQVTALQLPPWFQNRVSPFKDMIFCFSEEDWSLLDPAQTGFYGEFIIGEDCGVSLPPNDPAAQMDLSQGEENEPRVPELQDLQGKDISQVSYLDFPSLEPFQVEERRKRDELQVPEFQTCQQTTLPQSTCSAGGDAPFAENSLDEEVTIEIVLSSSGDEDSQLGPYCTDEPQSPTEKQHSLPTSHRSGMEAGSEMQTSKKSYVCPNCGKIFRWRVNFIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLEAHEAQKPFRCGACGKSFRLNSHLLSHRRIHLQPDRLEIVKRREQVASGTVGGDSDELLAKNKAKLPYQCCECGKVFQRHDHLARHLSNTHMDKPRPFQCRYCVKRFSQNSDLLRHERLHMKRRSKQALNSY", "length": 589, "header": "tr|A0A286ZSV4-1|A0A286ZSV4_PIG Isoform 1 of Zinc finger protein 496 OS=Sus scrofa OX=9823 GN=ZNF496 PE=3 SV=1 CANONICAL=A0A286ZSV4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZSV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4/entry#A0A286ZSV4-1", "sequence": { "sequence": "MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGELPNPESSRRLFRRFCYQEAAGPQEALHRLWDLCRGWLRPERHTKEQILELLVLEQFLAILPREIQGWVRAQEPESGDQAVAAVEALEREPGRPWQWLKHCEDPVVIDDADSPPDQEQERLPSEPQSDLAKSLDTQPMALAQGPGLPSRLSGQLSGDPVLQDTSLLQEASLRDAQQVTALQLPPWFQNRVSPFKDMIFCFSEEDWSLLDPAQTGFYGEFIIGEDCGVSLPPNDPAAQMDLSQGEENEPRVPELQDLQGKDISQVSYLDFPSLEPFQVEERRKRDELQVPEFQTCQQTTLPQSTCSAGGDAPFAENSLDEEVTIEIVLSSSGDEDSQLGPYCTDEPQSPTEKQHSLPTSHRSGMEAGSEMQTSKKSYVCPNCGKIFRWRVNFIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLEAHEAQKPFRCGACGKSFRLNSHLLSHRRIHLQPDRLEIVKRREQVASGTVGGDSDELLAKNKAKLPYQCCECGKVFQRHDHLARHLSNTHMDKPRPFQCRYCVKRFSQNSDLLRHERLHMKRRSKQALNSY", "length": 589, "header": "tr|A0A286ZSV4-1|A0A286ZSV4_PIG Isoform 1 of Zinc finger protein 496 OS=Sus scrofa OX=9823 GN=ZNF496 PE=3 SV=1 CANONICAL=A0A286ZSV4-1" }, "locus": { "chromosome": "2", "start_pos": 57095252, "end_pos": 57056550, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059264.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059264.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034558.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034558.2" } ] } }, { "isoform_ac": "A0A287ASC6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4/entry#A0A287ASC6-1", "sequence": { "sequence": "MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGELPNPESSRRLFRRFCYQEAAGPQEALHRLWDLCRGWLRPERHTKEQILELLVLEQFLAILPREIQGWVRAQEPESGDQAVAAVEALEREPGRPWQWLKHCEDPVVIDDADSPPDQEQERLPSEPQSDLAKSLDTQPMALAQGPGLPSRLSGQLSGDPVLQDTSLLQEASLRDAQQVTALQLPPDMIFCFSEEDWSLLDPAQTGFYGEFIIGEDCGVSLPPNDPAAQMDLSQGEENEPRVPELQDLQGKDISQVSYLDFPSLEPFQVEERRKRDELQVPEFQTCQQTTLPQSTCSAGGDAPFAENSLDEEVTIEIVLSSSGDEDSQLGPYCTDEPQSPTEKQHSLPTSHRSGMEAGSEMQTSKKSYVCPNCGKIFRWRVNFIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLEAHEAQKPFRCGACGKSFRLNSHLLSHRRIHLQPDRLEIVKRREQVASGTVGGDSDELLAKNKAKLPYQCCECGKVFQRHDHLARHLSNTHMDKPRPFQCRYCVKRFSQNSDLLRHERLHMKRRSKQALNSY", "length": 579, "header": "tr|A0A287ASC6-1|A0A287ASC6_PIG Computationally mapped isoform of Zinc finger protein 496 OS=Sus scrofa OX=9823 GN=ZNF496 PE=3 SV=2 CANONICAL=A0A286ZSV4-1" }, "locus": { "chromosome": "2", "start_pos": 57095252, "end_pos": 57056550, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049136.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049136.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046867.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046867.2" } ] } }, { "isoform_ac": "A0A5G2QNP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4/entry#A0A5G2QNP2-1", "sequence": { "sequence": "MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGELPNPESSRRLFRRFCYQEAAGPQEALHRLWDLCRGWLRPERHTKEQILELLVLEQFLAILPREIQGWVRAQEPESGDQAVAAVEALEREPGRPWQWLKHCEDPVVIDDADSPPDQEQERLPSEPQSDLAKSLDTQPMALAQGPGLPSRLSGQLSGDPVLQDTSLLQEASLRDAQQVTALQLPPNRVSPFKDMIFCFSEEDWSLLDPAQTGFYGEFIIGEDCGVSLPPNDPAAQMDLSQGEENEPRVPELQDLQGKDISQVSYLDFPSLEPFQVEERRKRDELQVPEFQTCQQTTLPQSTCSAGGDAPFAENSLDEEVTIEIVLSSSGDEDSQLGPYCTDEPQSPTEKQHSLPTSHRSGMEAGSEMQTSKKSYVCPNCGKIFRWRVNFIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLEAHEAQKPFRCGACGKSFRLNSHLLSHRRIHLQPDRLEIVKRREQVASGTVGGDSDELLAKNKAKLPYQCCECGKVFQRHDHLARHLSNTHMDKPRPFQCRYCVKRFSQNSDLLRHERLHMKRRSKQALNSY", "length": 586, "header": "tr|A0A5G2QNP2-1|A0A286ZSV4_PIG Computationally mapped isoform of Zinc finger protein 496 OS=Sus scrofa OX=9823 GN=ZNF496 PE=3 SV=1 CANONICAL=A0A286ZSV4-1" }, "locus": { "chromosome": "2", "start_pos": 57095252, "end_pos": 57056550, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079747.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079747.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065675.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065675.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNP2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518601", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518601", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1LVS9-1", "protein_name": "Zinc finger protein 496", "gene_name": "Zfp496", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGEPPSPESSRRLFRRFRYQEAAGPREALQRLWELCRGWLRLERHTKEQILELLVLEQFLAILPWEIQSWVRAQEPESGEQAVAAVEALEREPGRPWQWLKHCEDPVVIDDGDGPAPQDLEQERMSAESQSNPDALPGALAQDPGLLSRSPGQPSEDPVPQDAVLSQEQSVRDAQPVTTCQLPPNRVSPFKDMILCFSEEDWSLLDPAQTGFYGEFIIGEDYAVSMPPNESPVQLGHSHEEENGLRVTEWTDLQDKEAPQASCIDLQPFQGEERKKWEELQVPEPQSCQQVVLPPSPCPGGDPPPLKNNLDQEVTIEIVLSSSGDEDSQHSPYCTEELRSPPENLHSLPAPQSNTRPGGEVQSSQKSYVCPSCGKAFRWRVNFIRHLRSRREQKPHKCSVCGELFSDSEDLDGHLETHEAQKPYRCTVCGKSFRLNSHLISHQRIHLQPDKQQPLKKNEEDSLETESTGTNDLLEKSKAKLGFQCADCEKSFQRHDYLVRHRRHCHLKDETRPFQCRYCVKTFRQNYDLLRHERLHMKRRSKQALNSY", "length": 579 }, "evidence": [ { "id": "A0A286ZSV4", "url": "https://omabrowser.org/oma/group/A0A286ZSV4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5SXI5-1", "protein_name": "Zinc finger protein 496", "gene_name": "Znf496", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGEPPSPESSRRLFRRFRYQEAAGPREALQRLWELCRGWLRLERHTKEQILELLVLEQFLAILPWEIQSWVRAQEPESGEQAVAAVEALEREPGRPWQWLKHCEDPVVIDDGDGPAAPQDLEQERMSAESQSYPDAPPGALVQGTGLLSRSPGQPSEDLVPQDAFVVQEQSIRDAQPVATCQLPPNRVSPFKDMILCFSEEDWSLLDPAQTGFYGEFIIGEDYAVSMPPNEPPVQPGHSHEEENGLRVTEWTTDLQDKEIPQASCLDLSSLQPFQGEERRKWEELQVPELQPCPQVVLSQSPCPAGGDPPALKSSLDQEVTIEIVLSSSGDEDSQHSPYCTEELRSPPEDLHSVPAHQSNASAEGEVQTSQKSYVCPNCGKIFRWRVNFIRHLRSRREQKPHKCSVCGELFSDSEDLDGHLETHEAQKPYRCTACGKSFRLNSHLISHRRIHLQPASQQPMKKSEEEALETEGTGASDLLEKSKAKLSFQCGDCEKSFQRHDHLVRHRRHCHLKDETRPFQCRYCVKTFRQNYDLLRHERLHMKRRSKQALNSY", "length": 585 }, "evidence": [ { "id": "A0A286ZSV4", "url": "https://omabrowser.org/oma/group/A0A286ZSV4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96IT1-1", "protein_name": "Zinc finger protein 496", "gene_name": "ZNF496", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGELPSPESSRRLFRRFRYQEAAGPREALQRLWDLCGGWLRPERHTKEQILELLVLEQFLAILPREIQSWVRAQEPESGEQAVAAVEALEREPGRPWQWLKHCEDPVVIDDGDSPLDQEQEQLPVEPHSDLAKNQDAQPITLAQCLGLPSRPPSQLSGDPVLQDAFLLQEENVRDTQQVTTLQLPPSRVSPFKDMILCFSEEDWSLLDPAQTGFYGEFIIGEDYGVSMPPNDLAAQPDLSQGEENEPRVPELQDLQGKEVPQVSYLDSPSLQPFQVEERRKREELQVPEFQACPQTVVPQNTYPAGGNPRSLENSLDEEVTIEIVLSSSGDEDSQHGPYCTEELGSPTEKQRSLPASHRSSTEAGGEVQTSKKSYVCPNCGKIFRWRVNFIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLESHEAQKPYRCGACGKSFRLNSHLLSHRRIHLQPDRLQPVEKREQAASEDADKGPKEPLENGKAKLSFQCCECGKAFQRHDHLARHRSHFHLKDKARPFQCRYCVKSFTQNYDLLRHERLHMKRRSKQALNSY", "length": 587 }, "evidence": [ { "id": "A0A286ZSV4", "url": "https://omabrowser.org/oma/group/A0A286ZSV4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZSV4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A286ZSV4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 589, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A286ZSV4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A286ZSV4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A286ZSV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 409, "end_pos": 437, "start_aa": "Tyr", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A286ZSV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A286ZSV4" }, { "id": "PS50804", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50804" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SCAN box", "eco_id": "ECO_0000259", "start_pos": 42, "end_pos": 123, "start_aa": "Arg", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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May regulate expression of other M-band proteins via an SRF-dependent pathway. 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"MSENVVCTGAVTAVKEVWEERIKKHNEDLKREKEFQQKLVRIWEERVCLTKLREKVTMEDGRAILKIEKEEWQTLPSSLLKLSQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPRGIGLLTRLQELNLSYNKIKTVPSELSHCASLEKLELAVNRDICDLPHELSNLLKLTHLDLSMNHFTTIPSAVLNMPALEWLDMGSNRLEQLPDTIERMQSLHTLWLQRNEITCLPETISNMKNLGTLVLSNNKLQDIPVCMEKMTNLRFVNFRDNPLKLQVTLPPSENVDEEEERELFGLQFMHTYIEESRRAGIY", "length": 319, "header": "tr|A0A286ZT07-1|A0A286ZT07_PIG Isoform 1 of Leucine-rich repeat-containing protein 39 OS=Sus scrofa OX=9823 GN=LRRC39 PE=4 SV=2 CANONICAL=A0A286ZT07-1" }, "isoforms": [ { "isoform_ac": "A0A286ZT07-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZT07/entry#A0A286ZT07-1", "sequence": { "sequence": "MSENVVCTGAVTAVKEVWEERIKKHNEDLKREKEFQQKLVRIWEERVCLTKLREKVTMEDGRAILKIEKEEWQTLPSSLLKLSQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPRGIGLLTRLQELNLSYNKIKTVPSELSHCASLEKLELAVNRDICDLPHELSNLLKLTHLDLSMNHFTTIPSAVLNMPALEWLDMGSNRLEQLPDTIERMQSLHTLWLQRNEITCLPETISNMKNLGTLVLSNNKLQDIPVCMEKMTNLRFVNFRDNPLKLQVTLPPSENVDEEEERELFGLQFMHTYIEESRRAGIY", "length": 319, "header": "tr|A0A286ZT07-1|A0A286ZT07_PIG Isoform 1 of Leucine-rich repeat-containing protein 39 OS=Sus scrofa OX=9823 GN=LRRC39 PE=4 SV=2 CANONICAL=A0A286ZT07-1" }, "locus": { "chromosome": "4", "start_pos": 117960915, "end_pos": 117944306, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052736.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052736.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034614.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034614.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZT07", "url": "https://www.uniprot.org/uniprotkb/A0A286ZT07" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZT07", "url": "https://www.uniprot.org/uniprotkb/A0A286ZT07" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "M band", "id": "GO:0031430", "url": 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pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZT08", "url": "https://www.uniprot.org/uniprotkb/A0A286ZT08" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516372", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516372", "resource": "KEGG Pathway" } ], 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"length": 1503, "header": "tr|I3LD06-1|I3LD06_PIG Isoform 1 of Rho GTPase-activating protein 5 OS=Sus scrofa OX=9823 GN=ARHGAP5 PE=4 SV=2 CANONICAL=I3LD06-1" }, "isoforms": [ { "isoform_ac": "A0A286ZU16-1", "url": "https://www.uniprot.org/uniprotkb/I3LD06/entry#A0A286ZU16-1", "sequence": { "sequence": "MSLPPPPPGPLPLRRRRRRPTVLGLCTEGLYRVSGNKTDQDNIQKQFDQDHNISLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPDLLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYIITHLNRVSQQNKVNLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVETANTVAPPPPSNPGQLVEPMVPLQLPPPLQPQLIQPQLQTDPLGII", "length": 237, "header": "tr|A0A286ZU16-1|A0A286ZU16_PIG Computationally mapped isoform of Rho GTPase activating protein 5 OS=Sus scrofa OX=9823 GN=ARHGAP5 PE=4 SV=1 CANONICAL=I3LD06-1" }, "locus": { "chromosome": "7", "start_pos": 67594102, "end_pos": 67497559, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065462.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065462.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035154.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035154.2" } ] } }, { "isoform_ac": "I3LD06-1", "url": "https://www.uniprot.org/uniprotkb/I3LD06/entry#I3LD06-1", "sequence": { "sequence": "MMAKNKEPRPPSYTISVVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDITQSGEDGVECRIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLSVDGFLLCIDVSQGCNRKFDDQLKFVNNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKKNLLVVETSARFNVNIETCFAALVQMLDKTRGKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTLPRAFNTLLPNLEEIEHLNWSEALKLMEKRSDFQLCFVVLEKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEKRRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITETDSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCTDIKVEQLLTSSLLQVDHGRLRLYHDSTNIDKVNLFILGKDGLAQELANEIRTQSTDDEYTLDGKIYELDLRPVDAKSPYFLSQLWTAAFKPHGCFCVFNSIESLNFIGEFIGKIRTEASQIRKDKYMANLPFTLILANQRDSISKNLPILRHQGQQLANKLQCPFVDVPAGTYPRKFNETQIKQALRGVLESVKHNLDVVSPVPTNKDVSEADLRIVMCAMCGDPFSVDLILSPFLDSHSCSAAQAGQNNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKELMTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIENSYLSDNTRESTHQSEDVFLPSPRDCFPYNNYPDSDDDTEAPPPYSPIGDDVQLLPTPSDRSRYRLDLEGNEYPIHSTPNCHDHERNHKVPPPIKPKPVVPKTNVKKLDPNLLKTIEAGIGKNPRKQTSRVPLAHPEDMDPSDNYSEPIDTIFKQKGYSDEIYVVPDDSQNRIIKIRNSFVNNTQGDEENGFSDRTSKSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFPTSKTKRKGRHRGSEEDPLLSPVETWKGGIDNPAITSDQELDDKKLKKKTHKVKEDKKQKKKTKNFNPPTRRNWESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNISLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPDLLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYIITHLNRVSQQNKVNLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVETANTVAPPPPSNPGQLVEPMVPLQLPPPLQPQLIQPQLQTDPLGII", "length": 1503, "header": "tr|I3LD06-1|I3LD06_PIG Isoform 1 of Rho GTPase-activating protein 5 OS=Sus scrofa OX=9823 GN=ARHGAP5 PE=4 SV=2 CANONICAL=I3LD06-1" }, "locus": { "chromosome": "7", "start_pos": 67580083, "end_pos": 67497559, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002199.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002199.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021934.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021934.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1003, "start_aa": "Thr", "end_pos": 1003, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1003", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520849", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520849", "resource": "KEGG Pathway" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013026", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013026", "resource": "Reactome", "description": "RHOB GTPase cycle" }, { "id": "R-SSC-9013106", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013106", "resource": "Reactome", "description": "RHOC GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" }, { "id": "R-SSC-9013406", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013406", "resource": "Reactome", "description": "RHOQ GTPase cycle" }, { "id": "R-SSC-9013408", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013408", "resource": "Reactome", "description": "RHOG GTPase cycle" }, { "id": "R-SSC-9013409", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013409", "resource": "Reactome", "description": "RHOJ GTPase cycle" }, { "id": "R-SSC-9013423", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013423", "resource": "Reactome", "description": "RAC3 GTPase cycle" }, { "id": "R-SSC-9035034", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9035034", "resource": "Reactome", "description": "RHOF GTPase cycle" }, { "id": "R-SSC-9696264", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9696264", "resource": "Reactome", "description": "RND3 GTPase cycle" }, { "id": "R-SSC-9696270", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9696270", "resource": "Reactome", "description": "RND2 GTPase cycle" }, { "id": "R-SSC-9696273", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9696273", "resource": "Reactome", "description": "RND1 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K7N9-1", "protein_name": "Rho GTPase-activating protein 5", "gene_name": "Arhgap5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMAKNKEPRPPSYTVSVVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDITQNGEDGVECKIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLNVDGFLLCIDVSQGCNRKFDDQLKFVNNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKKNLLVVETSARFNVNIETCFTALVQMLDKTRGKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYISTLPRAFNTLLPDLEEIEHLNWLEALKLMEKRADFQLCFVVLEKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEKRRIEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSGQYCTDIKVENLLANSLLHSDHNRSRLYHDSTNIDKVNLFILGKDGLAQELANEIRTQSTDDEYALDGKIYELDLRPVDAKSPYILSQLWTAAFKPHGCFCVFNSIESLSFIGEFIGKIRTEASQIRKDKYMANLPFTLILANQRDSISKNLPILRHQGQQLANKLQCPFVDVPAGTYPRKFNESQIKQALRGVLESVKHNLDVVSPVPINKDVSEADLRIVMCAMCGDPFSVDIILSPFLDSHSCSAAQAGQNNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKELMTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIENSYLSDNTRESTHQSEDVFLPSPRDCFPYNNYPDSDDDTEAPPPYSPIGDDVQLLPTPSDRSRYRLDLEGNEYPVHSTPNCHDHERNHKVPPPIKPKPVVPKTNVKKLDPNLLKTIEAGIGKNPRKQTSRVPLAHPEDMDSSDNYAEPLDTIFKQKGYPDEIYVVPDDSQNRIIKIRNSFVNNTQGDEENGFSDRTSKGHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFPTSKTKRKGRHRGSEEDPLLSPVETWKGGIDNPAITSDQEVDDKKIKKKPHKVKEDKKKKKTKTFNPPTRRNWESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLASMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQNKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVETANTVAAPPTSNPGQLVESMVPLQLPPPLQPQLIQPQLQTDPLGII", "length": 1502 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8C2QCH1-1", "protein_name": "Rho GTPase-activating protein 5", "gene_name": "Arhgap5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MMAKNKEPRPPSYTVSVVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDITQSGEDGVECKIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLNVDGFLLCIDVSQGCNRKFDDQLKFVNNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKKNLLVVETSARFNVNIETCFTALVQMLDKTRGKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYISTLPRAFNTLLPDLEEIEHLNWLEALKLMEKRADFQLCFVVLEKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEKRRIEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSGQYCTDIKVEHLLASSLLQLDHGRLRLYHDSTNIDKVNLFILGKDGLAQELANEIRTQSTDDEYALDGKIYELDLRPVDAKSPYLLSQLWTAAFKPHGCFCVFNSIESLSFIGEFIGKIRTEASQIRKDKYMANLPFTLILANQRDSISKNLPILRHQGQQLANKLQCPFVDVPAGTYPRKFNESQIKQALRGVLESVKHNLDVVSPVPINKDVSEADLRIVMCAMCGDPFSVDLILSPFLDSHSCSAAQAGQNNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKELMTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIENSYLSDNTRESTHQSEDVFLPSPRDCFPYNNYPDSDDDTEAPPPYSPIGDDVQLLPTPSDRSRYRLDLEGNEYPVHSTPNCHDHERNHKVPPPIKPKPVVPKTNVKKLDPNLLKTIEAGIGKNPRKQISRVPLPHPEDVDPSDNYSEPLDTIFKQKGYPDEIYVVPDDSQNRIIKIRNSFVNNTQGDEENGFSDRTLKGHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKRKGRHRGSEEDPLLSPVETWKGGIDNPAITSDQEVDDKKMKKKTHKVKEDKKQKKKTKTFNPPTRRNWESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKIERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQNKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVETTNTVPPPPPSNPGQLVESMVPLQLPPPLQPQLIQPQLQTDPLGII", "length": 1503 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0XQ98-1", "protein_name": "Rho GTPase-activating protein 5", "gene_name": "ARHGAP5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MMAKNKEPRPPSYAVSVVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDVTQSGEDGIDCRIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLSIDGFLLCIDVSQGCNRKFDDQLKFVNNLYIQLSKSKKPIIIAATKCDECVDHYLREVQAFASNKKNLVVVETSARFNVNVETCFTALVQMMDKTRGKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNHPDYEEYINLEGTKKAKNTFSKHIEQLKQEHIKKRKEEYINALPRALNTLLSNLDEIEHLSWSEALKLMEKRPDFHSCFVVLEKTPWDETDHIDKVNDRRIPFDLLTTLEAEKVYQNHVQHLISEKRRIEMKEKFKKTLEKIQFISPGQPWEEVICFVMEDEAFKYITDADSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHAVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCMDIKVEQLLANSLLQLDHGRSNLYHDSANIDKVNLFILGKDGLAQELANEIRTQSTDDEYALDGKIYELDLRPVDAKSPYLLTQLWTSAFKPHGCFCVFNSIESLNFIGDCIAKIRAEASQIRRDKYMANLPFTLILANQRDSVSKNLPILRHQGQQLANKLQCPFVDVPAGTYPRKFNETQIKQALRGVLEAVKHHFDVVSPVPTIKDLSEADLRIVMCAMCGDPFSVDLILSPFLESHSCSAAQAGQNNSVMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKELMTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIESSYMSDSTRETTHTSEDVFSRSPRGSSLDYNYPDSEDDAEGPPPYSPIGDDVRLLPTPSDRSKYRLDLEGNEYPIHSTPLNCHDHERNHKVPPPIKPKPLVPRTNVKKLDPNLLKTIEAGIGKNPRKQPSRVPVAPPEDVDQSDNYAEPIDTIFKHKGFADDIYAVPDDSQNRIIKVRNSMPINAQGDEENGFSDRISKSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKAKRKGRHRGSEEDPLLSPVETWKGGIDNPAITSDQELDDKKTKKKTQKVKEDKKQKKKVKTFNPPIRRNWESNYFGMPLQDLVTSEKPIPLFVEKCVQFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHSISLESMEVTVNAVAGALKAFFADLPDPLIPYSLHQELLEASKILDKTERLHELKEIVKKFHPVNYDVFKYVITHLNRVSQQYKTNFMTADNLSICFWPTLMRPDFENREFLSTTKIHQSIIETFIQQCQFFFYNGEIVEAPNPVACQPPPSNTVQMVEPMVPLQLPPPLQPQLIQPQLPADPLGII", "length": 1505 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BM23-1", "protein_name": "Rho GTPase-activating protein 5", "gene_name": "ARHGAP5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MMAKNKEPRPPSYTISVVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDITQSGEDGVECKIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLNVDGFLLCIDVSQGCNRKFDDQLKFVNNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKKNLLVVETSARFNVNIETCFTALVQMLDKTRGKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTLPRAFNTLLPNLEEIEHLNWSEALKLMEKRADFQLCFVVLEKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEKRRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCTDIKVEQLLASSLLQLDHGRLRLYHDSTNIDKVNLFILGKDGLAQELANEIRTQSTDDEYALDGKIYELDLRPVDAKSPYFLSQLWTAAFKPHGCFCVFNSIESLNFIGEFIGKIRTEASQIRKDKYMANLPFTLILANQRDSISKNLPILRHQGQQLANKLQCPFVDVPGGTYPRKFNETQIKQALRGVLESVKHNLDVVSPVPTNKDVSEADLRIVMCAMCGDPFSVDLILSPFLDSHSCSAAQAGQNNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKELMTEGEHIATEISAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIENSYLSDSTRESTHQSEDVFLPSPRDCFPYNNYPDSDDDTEAPPPYSPIGDDVQLLPTPSDRSRYRLDLEGNEYPIHSTPNCHDHERNHKVPPPIKPKPVAPKTNVKKLDPNLLKTIEAGIGKNPRKQTSRVPLAHPEDMDPSDNYSEPIDTIFKQKGYSDEIYVVPDDSQNRVIKIRNSFVNNTQGDEENGFSDRTSKSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKRKGRHRGSEEDPLLSPVETWKGGIDNPAITSDQELDDKKMKKKTHKVKEDKKQKKKTKNFNPPTRRNWESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNISLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKILDKAERLHALKEIVKKFHPVNYDVFRYIITHLNRVSQHNKVNLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVETANTVAPAPPSNPGQLVEPMVPLQLPPPLQPQLIQPQLQTDPLGII", "length": 1503 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1R372-1", "protein_name": "Rho GTPase-activating protein 5", "gene_name": "arhgap5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAKNKETRPTYAVSVVGLSGTEKEKGNCGVGKSCLCNRYVRPSADCYYLEHTSVLSTIDFGGRVVNNDHFLYWGEVLHRGDDGVECRIQVIEQTEFIDDQTFLPHRSTNLQPYTKRAANTKLQSAEKLMYICTDQLGLEQDFDQKQMPDGKLNIDGFVLCIDISKGCNRKFDDQMKFVHSLYSQISKAKKPIIIAATKCDECVEQYLREVQTFVTGKKNLMLVETSARASVNVELCFNALTQQIDKTRGKPKIISYLEAYKSQRQLVASVSDKFEKLIVQTVRDYHTSWKIVSNKLKSHPDYEEYINLEGTKKARNTFSKHIEQLRQEHIKRRREDYLTSLPKIFNKLLNNLEEIETMSWTEAQSLMRSRHEFQYCFIELEHTPWYETDHLDKTDDRRVPFDILQTMQGERIYQNHVQHLISEKRRLEMKEKFKKTLERVHFISPGQPWEEVMCFVMEDEAYKYITESDRRDVYSRHQQEIVERAKEEFQEMLFEHAELFYDLDLNATPSYDKMSEIHAVLNEEPRYRALQKLATDRESLLLKHIGFVYHPTKETCLSGTACIDLKVEQVLANRLVQLDHGRSNIYYNSANIEKVNLCLVGREGLAQELANEIRAQSTDDEYTLDGKIYELDLLPVDVNSGMLLNHSWISTFKPHGFFCVFSSIESLNYIGDRVSRIRAEIAQSRRDRYSQPVPFILILANQRDSVCKNMPILRHQGQQLANKLQCTFVDIPTGTFPRKFNESQIKQALRAVLEGLKHNFDMMSPMPSIKDLSETDLRIVMCAMCGDPFSVDLILSPFLDSHSCSAGQPGQCNTLILDKIIGNGRRRIQVTVLSYHSSIGIRKDELVHGYILVYSAKRKSSMAMLRAFLAEVQDVIPVQLVAITDSQADFFENEAIKELMTEGEHIATEIAAKFTALYSLSQYHRQTEVFTPFFNEVLEKKSNIESSFMFDNSRDGTGTTEDVFPQSPHSHSPAYQYYPDSEDDGEGPPPYSPIGDDVQLLPNPSERKYRIDLEGNEYPIHSTPVGEHERNHKVPPPVKPKPNVLPKPNVKKLDPNLLRTIEAGMRTSRWTRGPMMGHSDDLEASDNYAEPADTLQHKSKGYSDDIYAVPEDAHSRSGKTRNSFGGLVVHVDEENGFDSMSKSQGGRRPSKYKHRSKILFSKTKAYHRRVHSDVSDDESGPATQKKKKGRGNRGSEEDPLLSPVDPWKGGIDNPAITSDPEQDERKTKKKKAPKTKEPKKPTRSTKTTKPLYPPTRRNWESNYFGVPLQNLVTPDRPIPLFVEKCVDYIERTGFTTEGLYRVCGNKTDQDNIQKQFDQDHSIDLIVMDVAVNAVAGALKAFFADLPDPLIPYSLHPELVEAAKIVDHYERLQVLKEIVRKFPPVNYEVFKYVITHLNRVSQHSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQSVIESFIQQCQYFFYGGDMTEPSSAEGTPPPHGHGLESLLALQLPPPLQPQQIQHPLPPEPLI", "length": 1502 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P97393-1", "protein_name": "Rho GTPase-activating protein 5", "gene_name": "Arhgap5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMAKNKEPRPPSYTVSVVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDITQNGEDGVECKIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLNVDGFLLCIDVSQGCNRKFDDQLKFVNNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKKNLLVVETSARFNVNIETCFTALVQMLDKTRGKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYISTLPRAFNTLLPDLEEIEHLNWLEALKLMEKRADFQLCFVVLEKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEKRRIEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAFKYITEADSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSGQYCTDIKVENLLATSLLEMDHNRVRLYHDSTNIDKVNLFILGKDGLAQELANEIRTQSTDDEYALDGKIYELDLRPVDAKSPYILSQLWTAAFKPHGCFCVFNSIESLSFIGEFIGKIRTEASQIRKDKYMTNLPFTLILANQRDSISKNLPILRHQGQQLANKLQCPFVDVPTGTYPRKFNESQIKQALRGVLESVKHNLDVVSPVPINKDVSEADLRIVMCAMCGDPFSVDLILSPFLDSHSCSAAQAGQNNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKELMTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIENSYLSDNTRESTHQSEDVFLPSPRDCFPYNNYPDSDDDTEAPPPYSPIGDDVQLLPTPSDRSRYRLDLEGNEYPVHSTPNCHDHERNHKVPPPIKPKPVVPKTNVKKLDPNLLKTIEAGIGKNPRKQTSRVPLAHPEDMDSSDNYVEPLDTIFKQKGYSDEIYVVPDDSQNRIIKIRNSFVNNTQGDEENGFSDRTSKGHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKRKGRHRGSEEDPLLSPVETWKGGIDNPAITSDQEVDDKKIKKKTHKVKEDKKQKKKTKTFNPPTRRNWESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLASMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERFHALKEIVKKFHPVNYDVFRYVITHLNRVSQQNKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVETANTVAPPPTSNPGQLVESMVPLQLPPPLQPQLIQPQLQTDPLGII", "length": 1503 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q13017-1", "protein_name": "Rho GTPase-activating protein 5", "gene_name": "ARHGAP5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMAKNKEPRPPSYTISIVGLSGTEKDKGNCGVGKSCLCNRFVRSKADEYYPEHTSVLSTIDFGGRVVNNDHFLYWGDIIQNSEDGVECKIHVIEQTEFIDDQTFLPHRSTNLQPYIKRAAASKLQSAEKLMYICTDQLGLEQDFEQKQMPEGKLNVDGFLLCIDVSQGCNRKFDDQLKFVNNLFVQLSKSKKPVIIAATKCDECVDHYLREVQAFASNKKNLLVVETSARFNVNIETCFTALVQMLDKTRSKPKIIPYLDAYKTQRQLVVTATDKFEKLVQTVRDYHATWKTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTLPRAFNTLLPNLEEIEHLNWSEALKLMEKRADFQLCFVVLEKTPWDETDHIDKINDRRIPFDLLSTLEAEKVYQNHVQHLISEKRRVEMKEKFKKTLEKIQFISPGQPWEEVMCFVMEDEAYKYITEADSKEVYGRHQREIVEKAKEEFQEMLFEHSELFYDLDLNATPSSDKMSEIHTVLSEEPRYKALQKLAPDRESLLLKHIGFVYHPTKETCLSGQNCTDIKVEQLLASSLLQLDHGRLRLYHDSTNIDKVNLFILGKDGLAQELANEIRTQSTDDEYALDGKIYELDLRPVDAKSPYFLSQLWTAAFKPHGCFCVFNSIESLSFIGEFIGKIRTEASQIRKDKYMANLPFTLILANQRDSISKNLPILRHQGQQLANKLQCPFVDVPAGTYPRKFNETQIKQALRGVLESVKHNLDVVSPIPANKDLSEADLRIVMCAMCGDPFSVDLILSPFLDSHSCSAAQAGQNNSLMLDKIIGEKRRRIQITILSYHSSIGVRKDELVHGYILVYSAKRKASMGMLRAFLSEVQDTIPVQLVAVTDSQADFFENEAIKELMTEGEHIATEITAKFTALYSLSQYHRQTEVFTLFFSDVLEKKNMIENSYLSDNTRESTHQSEDVFLPSPRDCFPYNNYPDSDDDTEAPPPYSPIGDDVQLLPTPSDRSRYRLDLEGNEYPIHSTPNCHDHERNHKVPPPIKPKPVVPKTNVKKLDPNLLKTIEAGIGKNPRKQTSRVPLAHPEDMDPSDNYAEPIDTIFKQKGYSDEIYVVPDDSQNRIKIRNSFVNNTQGDEENGFSDRTSKSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKRKGRHRGSEEDPLLSPVETWKGGIDNPAITSDQELDDKKMKKKTHKVKEDKKQKKKTKNFNPPTRRNWESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVETTNIVAPPPPSNPGQLVEPMVPLQLPPPLQPQLIQPQLQTDPLGII", "length": 1502 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VX32-1", "protein_name": "Rho GTPase-activating protein 190", "gene_name": "RhoGAPp190", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MRQFNISVIGLSGTEKDRGQVGVGKSCLCNRFMRPMADDYFIDHISVLSQSDFSGRIVNNDHFLYWGDVRKTTEEGVEYQFNIIEQTEFMDDSTFQAFKVGKMDPYSKRCTATKVFSAEKLMYICKNQLGIEKEYEQKVMPDGRLSIDGFVVVFDVSPVPNRSVEKQVEFVQNVIATILKNKKPLVLVTTKNDDAYELYVREAEKISQRKDYKSTVQLIETSAHESINIDLAFLLLAQMIDKVKNRVKIISYQESAKSRKELLDTRSEAVTRLIRNQITDYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLHQYLDKFALALEYLLPDIGALNISDDDAWECARNYLQNHIEFEQYFFECPQASWTELVDMDEAEDEARIPFDVLETSEAETVFRNYLNSVQQDKKKIGWKQQFKMLLEESGFVTPGKQLSEVRVLFMGRECFEALSEHDCQQIYDIHQDDIIEKSKQNFVELLLEHAQYFLQFKNVDNITQEDVRQITDVIQEDSRYKMLDRLDQERRLMLVQHLRFIHCPIRDHCPFFYNCVDSLIEEVLSDKSASNHKTPSGGGWKSSGSGSDRTLNLLIVGSEHLASDLLNDIRICTGSKGEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNQQSFETLKDNLERTLLCNLELEDKFENLPIVLVYQPQDLKENEVEYLRNEGMRLSEMLHCDFIDHTQNHQKYVYDILNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCGDQYDIENIVQPLVEESTLVKANEHSIIVDVFIGDAKRRVEFILSSYHGTSQYRDELIHGYIYFYSTKRRSSLANLSILAAQNANIPLQIIAVTESGGVNAFFNSDICQFLITEGNAVADRFKGSFMTFSADQYVKFAFYNPFLKTAWDNKYEVENLHVEESITLDSGEGTLENSVNQMPRPPPRHESYMLSNTLGTDGSGSENYEMAPTRSLNSLNEERDISLDEIYDDNEKPKHLHQKWLEDKSDGRRNMNKNLIWNNFSGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKVGEAPSRNCPAMSSSTFTLPTQQPGKLNMKNFQLVSDAVAKMNFTGSGSGSGSGSGSGSTGLGLGLGSGSGCMGDSFLEPVDKDGKRYDHAQLDGEDEDSEELAEYEQIYENEDCTESDSCASSTERRVRQQNAYYKASKKPVAAKKQKKKKVAIPVQTPRVPPFGSYVSPPEIPLHYQRMAVGGSGPEKPEPCVPEFMKSDKSPEYSMVPELAGAGIFGAENLPEYNMNQAKCLKDFEKLEKRRIKEETARQRKLQEKEKEQEKKLKRKLKQNAKGLVESAEAQFGKLMITSEQGEIPIFLNKCVEFIEKEGLDSEGIYRVPGSRAHVDMLFQRFEEDTNTEIDALDIPVNAVATALKDFFSKRLPPLFSKDIIKELEEIAGSRGVGNSKLNVEVKTDRSCRLIALKSLLQKLPPINFAILKYIFQHFVHVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDIVQTMIDQFPYLFCGKDAFVMV", "length": 1561 }, "evidence": [ { "id": "I3LD06", "url": "https://omabrowser.org/oma/group/I3LD06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "pmid": "" }, { "name": "Rho protein signal transduction", "id": "GO:0007266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007266", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "pmid": "" }, { "name": "regulation of cell size", "id": "GO:0008361", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008361", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "pmid": "" }, { "name": "SH2 domain binding", "id": "GO:0042169", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042169", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LD06", "url": "https://www.uniprot.org/uniprotkb/I3LD06" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1090, "end_pos": 1092, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1128, "end_pos": 1130, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1302, "end_pos": 1304, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1318, "end_pos": 1320, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1409, "end_pos": 1411, "annotation": "n_glycosylation_sequon" }, { "start_pos": 360, "end_pos": 362, "annotation": "n_glycosylation_sequon" }, { "start_pos": 507, "end_pos": 509, "annotation": "n_glycosylation_sequon" }, { "start_pos": 562, "end_pos": 564, "annotation": "n_glycosylation_sequon" }, { "start_pos": 742, "end_pos": 744, "annotation": "n_glycosylation_sequon" }, { "start_pos": 813, "end_pos": 815, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LD06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD06" }, { "id": "PS51676", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51676" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FF", "eco_id": "ECO_0000259", "start_pos": 267, "end_pos": 325, "start_aa": "Gln", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LD06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD06" }, { "id": "PS51852", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51852" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PG1 pseudoGTPase", "eco_id": "ECO_0000259", "start_pos": 590, "end_pos": 763, "start_aa": "Ser", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LD06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD06" }, { "id": "PS51853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PG2 pseudoGTPase", "eco_id": "ECO_0000259", "start_pos": 779, "end_pos": 944, "start_aa": "Arg", "end_aa": "Met", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LD06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD06" }, { "id": "PS50238", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50238" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rho-GAP", "eco_id": "ECO_0000259", "start_pos": 1263, "end_pos": 1450, "start_aa": "Met", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1003 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1090, "end_pos": 1092 }, { "start_pos": 1128, "end_pos": 1130 }, { "start_pos": 1302, "end_pos": 1304 }, { "start_pos": 1318, "end_pos": 1320 }, { "start_pos": 1409, "end_pos": 1411 }, { "start_pos": 360, "end_pos": 362 }, { "start_pos": 507, "end_pos": 509 }, { "start_pos": 562, "end_pos": 564 }, { "start_pos": 742, "end_pos": 744 }, { "start_pos": 813, "end_pos": 815 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LLD2-1", "uniprot_ac": "I3LLD2", "uniprot_id": "I3LLD2_PIG", "mass": { "chemical_mass": 55316.0, "monoisotopic_mass": 55316.0 }, "refseq": { "ac": "XP_020927321", "name": "noelin", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020927321" }, "gene_names": [ { "name": "OLFM1", "type": "recommended", "evidence": [ { "id": "I3LLD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLD2" } ] }, { "name": "OLFM1", "type": "synonym", "evidence": [ { "id": "XP_020927321", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020927321" } ] } ], "protein_names": [ { "name": "Olfactomedin 1", "type": "synonym", "evidence": [ { "id": "I3LLD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLD2/entry#names_and_taxonomy" } ] }, { "name": "noelin", "type": "synonym", 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OX=9823 GN=TATDN1 PE=3 SV=4 CANONICAL=I3LKU9-1" }, "isoforms": [ { "isoform_ac": "A0A287A0F5-1", "url": "https://www.uniprot.org/uniprotkb/I3LKU9/entry#A0A287A0F5-1", "sequence": { "sequence": "MAERDIGINLTDPMFRGIYRGVQKHQDDLQDVIERAVQIGVKKFMITGGNLQDSKDALHLAQTNDMFFSTVGCHPTRCGEFEKNNPDLYLTELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMRRNRDRCVGGVVHSFDGTKEAAAALMDLGLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIKTSFPTKKKWENGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKIFFPDI", "length": 294, "header": "tr|A0A287A0F5-1|A0A287A0F5_PIG Computationally mapped isoform of Deoxyribonuclease TATDN1 OS=Sus scrofa OX=9823 GN=TATDN1 PE=3 SV=1 CANONICAL=I3LKU9-1" }, "locus": { "chromosome": "4", "start_pos": 15159403, "end_pos": 15123733, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053540.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053540.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037393.1", "url": 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"name": "BTNL9", "type": "synonym", "evidence": [ { "id": "XP_003354442", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354442" } ] } ], "protein_names": [ { "name": "Butyrophilin like 9", "type": "synonym", "evidence": [ { "id": "I3LLH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLH1/entry#names_and_taxonomy" } ] }, { "name": "butyrophilin-like protein 9 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003354442", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354442" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LLH1", "url": "https://www.uniprot.org/uniprotkb/I3LLH1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BTNL9", "url": 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"https://www.genome.jp/dbget-bin/www_bget?ssc:100627581", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WEVHVGC", "url": "https://omabrowser.org/oma/group/WEVHVGC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LLH1", "url": "https://www.orthodb.org/?gene=I3LLH1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24100", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24100", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24100:SF130", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24100:SF130", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00622", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00622", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLH1-1", "url": "https://www.uniprot.org/uniprotkb/I3LLH1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVDFPVSQDSLPSSLFFLTHLLLLLQSGELYSEVSVVGPGDSILAHIGDEVEFLCHLSSYRDAEDMEIRWFRSQASDVVHLYQEGQELYDQQMKQFQNRTELVKDDITDGSVTLHLYSVIPADEGPYGCRFLSSDFSGEATWELEVVGLGSDPHISLEGFKEGGIQLRCSSSGWYPMPLAQWRDHHGRCLPPETEDIIQDAQSLFSLETSVVIQGGTQSNVTCSIQNPLLGQKKEFAVQIADVFLPRTSPWKRAFLGTLVGLLLLLALLLKLVLYIFQKQRRSQEKLKKQAEKDKGKLRAELGKLQVELDWRRAEGQAEWRAAQQYAVEVTLDPGSAHPSLEVSEDGKRVSSRRMAPGLAAGHHQQFLEQTCVLSQQRFSAGRHYWEVHVGHRSRWFLGVCLAKVQCSGPVLLSPANGYWVMGLWNGCEYFVLDPHRVALTMHVPPRCVGIFLDCDAGKLSFFNVTDGSHIFTFTDTFSETLCAYFRPRAHDGSKHPDPLTICPLPVRESSDNWLQS", "length": 517, "header": "tr|I3LLH1-1|I3LLH1_PIG Isoform 1 of Butyrophilin like 9 OS=Sus scrofa OX=9823 GN=BTNL9 PE=3 SV=1 CANONICAL=I3LLH1-1" }, "isoforms": [ { "isoform_ac": "A0A287A156-1", "url": "https://www.uniprot.org/uniprotkb/I3LLH1/entry#A0A287A156-1", 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"https://www.uniprot.org/uniprotkb/I3LLH1/entry#I3LLH1-1", "sequence": { "sequence": "MVDFPVSQDSLPSSLFFLTHLLLLLQSGELYSEVSVVGPGDSILAHIGDEVEFLCHLSSYRDAEDMEIRWFRSQASDVVHLYQEGQELYDQQMKQFQNRTELVKDDITDGSVTLHLYSVIPADEGPYGCRFLSSDFSGEATWELEVVGLGSDPHISLEGFKEGGIQLRCSSSGWYPMPLAQWRDHHGRCLPPETEDIIQDAQSLFSLETSVVIQGGTQSNVTCSIQNPLLGQKKEFAVQIADVFLPRTSPWKRAFLGTLVGLLLLLALLLKLVLYIFQKQRRSQEKLKKQAEKDKGKLRAELGKLQVELDWRRAEGQAEWRAAQQYAVEVTLDPGSAHPSLEVSEDGKRVSSRRMAPGLAAGHHQQFLEQTCVLSQQRFSAGRHYWEVHVGHRSRWFLGVCLAKVQCSGPVLLSPANGYWVMGLWNGCEYFVLDPHRVALTMHVPPRCVGIFLDCDAGKLSFFNVTDGSHIFTFTDTFSETLCAYFRPRAHDGSKHPDPLTICPLPVRESSDNWLQS", "length": 517, "header": "tr|I3LLH1-1|I3LLH1_PIG Isoform 1 of Butyrophilin like 9 OS=Sus scrofa OX=9823 GN=BTNL9 PE=3 SV=1 CANONICAL=I3LLH1-1" }, "locus": { "chromosome": "2", "start_pos": 57741082, "end_pos": 57728870, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028470.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028470.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024940.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024940.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LLH1", "url": "https://www.uniprot.org/uniprotkb/I3LLH1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627581", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627581", "resource": "KEGG Pathway" }, { "id": "R-SSC-8851680", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8851680", "resource": "Reactome", "description": "Butyrophilin (BTN) family interactions" } ], "orthologs": [ { "uniprot_canonical_ac": "M0R7E0-1", "protein_name": "Butyrophilin-like 9", "gene_name": "Btnl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADFSVLLGFLKQTPWCLTIFFTYLLFLQLWEVNSDEVWVLGPEESILARVGEAVEFPCRLSSYQDAGYMEILWFRTQVSNVVYLYQEPQGRSNPQMAQFRNRTLFEAYDIGEGSVNLHILSVVPSDEGRYGCRFLSHNFSGEATWELEVAGLGSDPHISLEGFNGEGIQLQCSSSGWYPKPKVQWRGHQDQCLSPESEDITQNAQGLFSLETSVIVRGGTHSNVSCIIQNPLLPQKKEFVLQIADVFLPRTSPWKKAFVGTLVVLPLCLVALAVLALRYFYKQRRFQENRVKQGEQDREKLQTELDWRRSEGQAEWRAAQQYAVDVTLDPATAHPSLEVSNNRKSVSSRLGVPSTAAGDPQRFSEQTCVLSRERFSSGRHYWEVHVGRRSRWFLGACLESVERSGPARLSPAAGYWVMGLWNRCEYFVLDPHRVALALRVPPRRVGVLLDYEAGKLSFFNVSDGSHIFSFTDTFSGTLCAYFRPRAHDGSEHPDPMTICSLPVRGLQINEENDNDNWLQPYEPLDPAW", "length": 529 }, "evidence": [ { "id": "I3LLH1", "url": "https://omabrowser.org/oma/group/I3LLH1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6UXG8-1", "protein_name": "Butyrophilin-like protein 9", "gene_name": "BTNL9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVDLSVSPDSLKPVSLTSSLVFLMHLLLLQPGEPSSEVKVLGPEYPILALVGEEVEFPCHLWPQLDAQQMEIRWFRSQTFNVVHLYQEQQELPGRQMPAFRNRTKLVKDDIAYGSVVLQLHSIIPSDKGTYGCRFHSDNFSGEALWELEVAGLGSDPHLSLEGFKEGGIQLRLRSSGWYPKPKVQWRDHQGQCLPPEFEAIVWDAQDLFSLETSVVVRAGALSNVSVSIQNLLLSQKKELVVQIADVFVPGASAWKSAFVATLPLLLVLAALALGVLRKQRRSREKLRKQAEKRQEKLTAELEKLQTELDWRRAEGQAEWRAAQKYAVDVTLDPASAHPSLEVSEDGKSVSSRGAPPGPAPGHPQRFSEQTCALSLERFSAGRHYWEVHVGRRSRWFLGACLAAVPRAGPARLSPAAGYWVLGLWNGCEYFVLAPHRVALTLRVPPRRLGVFLDYEAGELSFFNVSDGSHIFTFHDTFSGALCAYFRPRAHDGGEHPDPLTICPLPVRGTGVPEENDSDTWLQPYEPADPALDWW", "length": 535 }, "evidence": [ { "id": "I3LLH1", "url": "https://omabrowser.org/oma/group/I3LLH1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BJE2-1", "protein_name": "Butyrophilin-like protein 9", "gene_name": "Btnl9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADFSVFLGFLKQIPRCLSIFFTYLLFLQLWEVNSDKVWVLGPEESILARVGEAVEFPCRLSSYQDAEHMEIRWFRAQVSNVVYLYQEPQGRSSLQMAQFRNRTLFEAYDIAEGSVNLHILKVLPSDEGRYGCRFLSDNFSGEATWELEVAGSGSDPHISLQGFSGEGIQLQCSSSGWYPKPKVQWRGHQGQCLSPESEAITQNAQGLFSLETSVIVRGGAHSNVSCIIQNPLLPQKKEFVIQIADVFLPRMSPWKKAFVGTLVVLPLSLIVLTMLALRYFYKLRSFQEKQVKQGEEVREKLQTELDWRRSEGQAEWRAAQQYAADVTLDPATAHPSLEVSNNGKTVSSRLGVPSIAAGDPQRFSEQTCVLSRERFSSGRHYWEVHVGRRSRWFLGACLESVERSGPARLSPAAGYWVMGLWNRCEYFVLDPHRVALALRVPPRRIGVLLDYEAGKLSFFNVSDGSHIFSFTDTFSGALRAYLRPRAHDGSEHPDPMTICSLPVRGPQVLEENDNDNWLQPYEPLDPAWAVNEAVS", "length": 536 }, "evidence": [ { "id": "I3LLH1", "url": "https://omabrowser.org/oma/group/I3LLH1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LLH1", "url": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0001817", "evidence": [ { "database": "UniProtKB", "id": "I3LLH1", "url": "https://www.uniprot.org/uniprotkb/I3LLH1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 220, "end_pos": 222, "annotation": "n_glycosylation_sequon" }, { "start_pos": 464, "end_pos": 466, "annotation": "n_glycosylation_sequon" }, { "start_pos": 98, "end_pos": 100, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LLH1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 517, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LLH1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LLH1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LLH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLH1" }, { "id": "PS50188", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50188" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "B30.2/SPRY", "eco_id": "ECO_0000259", "start_pos": 310, "end_pos": 509, "start_aa": "Asp", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LLH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLH1" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 32, "end_pos": 145, "start_aa": "Ser", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 220, "end_pos": 222 }, { "start_pos": 464, "end_pos": 466 }, { "start_pos": 98, "end_pos": 100 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LG40-1", "uniprot_ac": "I3LG40", "uniprot_id": "I3LG40_PIG", "mass": { "chemical_mass": 119377.0, "monoisotopic_mass": 119377.0 }, "refseq": { "ac": "XP_005657174", "name": "sentrin-specific protease 7 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005657174" }, "gene_names": [ { "name": "SENP7", "type": "recommended", "evidence": [ { "id": "I3LG40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ] }, { "name": "SENP7", "type": "synonym", "evidence": [ { "id": "XP_005657174", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005657174" } ] } ], "protein_names": [ { "name": "SUMO specific peptidase 7", "type": "synonym", "evidence": [ { "id": "I3LG40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG40/entry#names_and_taxonomy" } ] }, { "name": "sentrin-specific protease 7 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005657174", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005657174" } ] } ], "function": [ { "annotation": "Protease that acts as a positive regulator of the cGAS-STING pathway by catalyzing desumoylation of CGAS. Desumoylation of CGAS promotes DNA-binding activity of CGAS, subsequent oligomerization and activation. Deconjugates SUMO2 and SUMO3 from targeted proteins, but not SUMO1. Catalyzes the deconjugation of poly-SUMO2 and poly-SUMO3 chains. Has very low efficiency in processing full-length SUMO proteins to their mature forms.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A739", "url": "https://www.uniprot.org/uniprotkb/A0A287A739#function" }, { "database": "UniProtKB", "id": "ARBA00057377", "url": "https://www.uniprot.org/uniprotkb/ARBA00057377#function" }, { "database": "UniProtKB", "id": "A0A8D1A7F6", "url": "https://www.uniprot.org/uniprotkb/A0A8D1A7F6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SENP7", "url": "https://www.uniprot.org/uniprotkb/I3LG40", "locus": { "chromosome": "13", "start_pos": 157672814, "end_pos": 157521784, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021791", "url": "https://www.ensembl.org/id/ENSSSCG00000021791" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021791", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021791", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100623734", "url": "https://www.ncbi.nlm.nih.gov/gene/100623734", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003653", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003653", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051947", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051947", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623734", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623734", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EFIFLEI", "url": "https://omabrowser.org/oma/group/EFIFLEI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287A2Z8", "url": "https://www.orthodb.org/?gene=A0A287A2Z8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A287A739", "url": "https://www.orthodb.org/?gene=A0A287A739", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LG40", "url": "https://www.orthodb.org/?gene=I3LG40", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46896", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46896", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46896:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46896:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02902", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02902", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005657174", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005657174", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A2Z8", "url": "https://www.uniprot.org/uniprotkb/A0A287A2Z8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2Z8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2Z8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A739", "url": "https://www.uniprot.org/uniprotkb/A0A287A739", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A739-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A739-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5X1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5X1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5X1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5X1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1A7F6", "url": "https://www.uniprot.org/uniprotkb/A0A8D1A7F6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1A7F6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1A7F6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG40-1", "url": "https://www.uniprot.org/uniprotkb/I3LG40-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDKGKAGRRRSSSEIITEGKRKKSSSSELHKITKMLNAKPEDVCVQSPLSKLRSSERWDLPLQRWKRSLRNKVLSLDHKSKKGVRGRPVTSKTSPERQLKVMLTNVLWTDLGRKFRKTLPRNDANLCDANKVQSESLPSTSVDSVETCQKLEPLHQSLNLSERIPRIILTNVLGTELGRKYIKTSSLTEASLGDTDNLQSEQLSSSSDGSIESCQNLNPHKSSFLSERSSQPSKTVDNNYAEQAAHTKGKRGVDDGIFLVISDTQPTDLSGGSRDCDHLEEGRRNKDDAYSDSKMEPTLIPRRRKKRLRSNLTDSHNSTYLDKSAEQTKEQENDPTVCTEFEKSIENYHEDSKKLLEEITLEPTEGDFIEVSSLHSQELALSAVPQITSDCSTTETFESSVSTDSAGNSPPVEKDENELNTIEQPVLSEHNEENQSFISAEPIVVSSDEEGPIEHKSSEILKLQPKQDHAITNENESTSEPAVSELPLITCESVQASPELCTYNPVMENVSSIIPSNEMDLQLDFVFTSVYIGKIKGASKGCVTFTTKYIKIPFQVSLHEISLLVDTTHLKRFGLWKSKDDDHSKRSHAILFLWVASNYLQEIQTQLENTLLSQQPKSTEFIFLELHSSISQREELKLKDIMTEISTTNGELELSYPLSWVQALPLFQNLSSKDSSFIHYYCASTCSFPAASAEEMKMKSMSQPSNTDTAKPTYTLLQKQSSGCYSLSITSNPDEEWREVRHTGPVQKLIVYPPPPTKGGLAVTSEDLECLEEGEFLNDVIIDFYLKYLILEKASEELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEATYEDFSQTLSQHSQAQQSQPDKKTIDNDLHTSSTLSLGTEDSQSPEMNVSVPKKRCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 1051, "header": "tr|I3LG40-1|I3LG40_PIG Isoform 1 of SUMO specific peptidase 7 OS=Sus scrofa OX=9823 GN=SENP7 PE=3 SV=2 CANONICAL=I3LG40-1" }, "isoforms": [ { "isoform_ac": "A0A287A2Z8-1", "url": "https://www.uniprot.org/uniprotkb/I3LG40/entry#A0A287A2Z8-1", "sequence": { "sequence": "MDKGKAGRRRSSSEIITEGKRKKSSSSELHKITKMLNAKPEDVCVQSPLSKLRSSERWDLPLQRWKRSLRNKVLSLDHKSKKGVRGRPVTSKTSPERSSQPSKTVDNNYAEQAAHTKGKRGVDDGIFLVISDTQPTDLSGGSRDCDHLEEGRRNKDDAYSDSKMEPTLIPRRRKKRLRSNLTDSHNSTYLDKSAEQTKEQENDPTVCTEFEKSIENYHEDSKKLLEEITLEPTEGDFIEVSSLHSQELALSAVPQITSDCSTTETFESSVSTDSAGNSPPVEKDENELNTIEQPVLSEHNEENQSFISAEPIVVSSDEEGPIEHKSSEILKLQPKQDHAITNENESTSEPAVSELPLITCESVQASPELCTYNPVMENVSSIIPSNEMDLQLDFVFTSVYIGKIKGASKGCVTFTTKYIKIPFQVSLHEISLLVDTTHLKRFGLWKSKDDDHSKRSHAILFLWVASNYLQEIQTQLENTLLSQQPKSTEFIFLELHSSISQREELKLKDIMTEISTTNGELELSYPLSWVQALPLFQNLSSKDSSFIHYYCASTCSFPAASAEEMKMKSMSQPSNTDTAKPTYTLLQKQSSGCYSLSITSNPDEEWREVRHTGPVQKLIVYPPPPTKGGLAVTSEDLECLEEGEFLNDVIIDFYLKYLILEKASEELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEATYEDFSQTLSQHSQAQQSQPDKKTIDNDLHTSSTLSLGTEDSQSPEMNVSVPKKRCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 920, "header": "tr|A0A287A2Z8-1|A0A287A2Z8_PIG Computationally mapped isoform of SUMO specific peptidase 7 OS=Sus scrofa OX=9823 GN=SENP7 PE=3 SV=1 CANONICAL=I3LG40-1" }, "locus": { "chromosome": "13", "start_pos": 157671104, "end_pos": 157521901, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040456.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040456.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038138.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038138.1" } ] } }, { "isoform_ac": "A0A287A739-1", "url": "https://www.uniprot.org/uniprotkb/I3LG40/entry#A0A287A739-1", "sequence": { "sequence": "MDKGKAGRRRSSSEIITEGKRKKSSSSELHKITKMLNAKPEDVCVQSPLSKLRSSERWDLPLQRWKRSLRNKVLSLDHKSKKGVRGRPVTSKTSPERQLKVMLTNVLWTDLGRKFRKTLPRNDANLCDANKVQSESLPSTSVDSVETCQKLEPLHQSLNLSERSSQPSKTVDNNYAEQAAHTKGKRGVDDGIFLVISDTQPTDLSGGSRDCDHLEEGRRNKDDAYSDSKMEPTLIPRRRKKRLRSNLTDSHNSTYLDKSAEQTKEQENDPTVCTEFEKSIENYHEDSKKLLEEITLEPTEGDFIEVSSLHSQELALSAVPQITSDCSTTETFESSVSTDSAGNSPPVEKDENELNTIEQPVLSEHNEENQSFISAEPIVVSSDEEGPIEHKSSEILKLQPKQDHAITNENESTSEPAVSELPLITCESVQASPELCTYNPVMENVSSIIPSNEMDLQLDFVFTSVYIGKIKGASKGCVTFTTKYIKIPFQVSLHEISLLVDTTHLKRFGLWKSKDDDHSKRSHAILFLWVASNYLQEIQTQLENTLLSQQPKSTEFIFLELHSSISQREELKLKDIMTEISTTNGELELSYPLSWVQALPLFQNLSSKDSSFIHYYCASTCSFPAASAEEMKMKSMSQPSNTDTAKPTYTLLQKQSSGCYSLSITSNPDEEWREVRHTGPVQKLIVYPPPPTKGGLAVTSEDLECLEEGEFLNDVIIDFYLKYLILEKASEELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEATYEDFSQTLSQHSQAQQSQPDKKTIDNDLHTSSTLSLGTEDSQSPEMNVSVPKKRCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 986, "header": "tr|A0A287A739-1|A0A287A739_PIG Computationally mapped isoform of Sentrin-specific protease 7 OS=Sus scrofa OX=9823 GN=SENP7 PE=3 SV=1 CANONICAL=I3LG40-1" }, "locus": { "chromosome": "13", "start_pos": 157671104, "end_pos": 157521901, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042835.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042835.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039582.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039582.1" } ] } }, { "isoform_ac": "A0A287B5X1-1", "url": "https://www.uniprot.org/uniprotkb/I3LG40/entry#A0A287B5X1-1", "sequence": { "sequence": "MLNAKPEDVCVQSPLSKLRSSERWDLPLQRWKRSLRNKVLSLDHKSKKGVRGRPVTSKTSPERQLKVMLTNVLWTDLGRKFRKTLPRNDANLCDANKVQSESLPSTSVDSVETCQKLEPLHQSLNLSERIPRIILTNVLGTELGRKYIKTSSLTEASLGDTDNLQSEQLSSSSDGSIESCQNLNPHKSSFLSERSSQPSKTVDNNYAEQAAHTKGKRGVDDGIFLVISDTQPTDLSGGSRDCDHLEEGRRNKDDAYSDSKMEPTLIPRRRKKRLRSNLTDSHNSTYLDKSAEQTKEQENDPTVCTEFEKSIENYHEDSKKLLEEITLEPTEGDFIEVSSLHSQELALSAVPQITSDCSTTETFESSVSTDSAGNSPPVEKDENELNTIEQPVLSEHNEENQSFISAEPIVVSSDEEGPIEHKSSEILKLQPKQDHAITNENESTSEPAVSELPLITCESVQASPELCTYNPVMENVSSIIPSNEMDLQLDFVFTSVYIGKIKGASKGCVTFTTKYIKIPFQVSLHEISLLVDTTHLKRFGLWKSKDDDHSKRSHAILFLWVASNYLQEIQTQLENTLLSQQPKSTEFIFLELHSSISQREELKLKDIMTEISTTNGELELSYPLSWVQALPLFQNLSSKDSSFIHYYCASTCSFPAASAEEMKMKSMSQPSNTDTAKPTYTLLQKQSSGCYSLSITSNPDEEWREVRHTGPVQKLIVYPPPPTKGGLAVTSEDLECLEEGEFLNDVIIDFYLKYLILEKASEELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEATYEDFSQTLSQHSQAQQSQPDKKTIDNDLHTSSTLSLGTEDSQSPEMNVSVPKKRCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 1017, "header": "tr|A0A287B5X1-1|A0A287B5X1_PIG Computationally mapped isoform of SUMO specific peptidase 7 OS=Sus scrofa OX=9823 GN=SENP7 PE=3 SV=2 CANONICAL=I3LG40-1" }, "locus": { "chromosome": "13", "start_pos": 157671104, "end_pos": 157544813, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039429.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039429.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051857.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051857.3" } ] } }, { "isoform_ac": "A0A8D1A7F6-1", "url": "https://www.uniprot.org/uniprotkb/I3LG40/entry#A0A8D1A7F6-1", "sequence": { "sequence": "MDKGKAGRRRSSSEIITEGKRKKSSSSELHKITKMLNAKPEDVCVQSPLSKLRSSERWDLPLQRWKRSLRNKVLSLDHKSKKGVRGRPVTSKTSPERQLKVMLTNVLWTDLGRKFRKTLPRNDANLCDANKVQSESLPSTSVDSVETCQKLEPLHQSLNLSERIPRIILTNVLGTELGRKYIKTSSLTEASLGDTDNLQSEQLSSSSDGSIESCQNLNPHKSSFLSERSSQPSKTVDNNYAEQAAHTKGKRGVDDGIFLVISDTQPTDLSGGSRDCDHLEEGRRNKDDAYSDSKMEPTLIPRRRKKRLRSNLTDSHNSTYLDKSAEQTKEQENDPTVCTEFEKSIENYHEDSKKLLEEITLEPTEGDFIEVSSLHSQELALSAVPQITSDCSTTETFESSVSTDSAGNSPPVEKDENELNTIEQPVLSEHNEENQSFISAEPIVVSSDEEGPIEHKSSEILKLQPKQDHAITNENESTSEPAVSELPLITCESVQASPELCTYNPVMENVSSIIPSNEMDLQLDFVFTSVYIGKIKGASKGCVTFTTKYIKIPFQAKSTEFIFLELHSSISQREELKLKDIMTEISTTNGELELSYPLSWVQALPLFQNLSSKDSSFIHYYCASTCSFPAASAEEMKMKSMSQPSNTDTAKPTYTLLQKQSSGCYSLSITSNPDEEWREVRHTGPVQKLIVYPPPPTKGGLAVTSEDLECLEEGEFLNDVIIDFYLKYLILEKASEELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEATYEDFSQTLSQHSQAQQSQPDKKTIDNDLHTSSTLSLGTEDSQSPEMNVSVPKKRCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 991, "header": "tr|A0A8D1A7F6-1|I3LG40_PIG Computationally mapped isoform of SUMO specific peptidase 7 OS=Sus scrofa OX=9823 GN=SENP7 PE=3 SV=1 CANONICAL=I3LG40-1" }, "locus": { "chromosome": "13", "start_pos": 157671104, "end_pos": 157521901, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058114.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058114.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045326.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045326.2" } ] } }, { "isoform_ac": "I3LG40-1", "url": "https://www.uniprot.org/uniprotkb/I3LG40/entry#I3LG40-1", "sequence": { "sequence": "MDKGKAGRRRSSSEIITEGKRKKSSSSELHKITKMLNAKPEDVCVQSPLSKLRSSERWDLPLQRWKRSLRNKVLSLDHKSKKGVRGRPVTSKTSPERQLKVMLTNVLWTDLGRKFRKTLPRNDANLCDANKVQSESLPSTSVDSVETCQKLEPLHQSLNLSERIPRIILTNVLGTELGRKYIKTSSLTEASLGDTDNLQSEQLSSSSDGSIESCQNLNPHKSSFLSERSSQPSKTVDNNYAEQAAHTKGKRGVDDGIFLVISDTQPTDLSGGSRDCDHLEEGRRNKDDAYSDSKMEPTLIPRRRKKRLRSNLTDSHNSTYLDKSAEQTKEQENDPTVCTEFEKSIENYHEDSKKLLEEITLEPTEGDFIEVSSLHSQELALSAVPQITSDCSTTETFESSVSTDSAGNSPPVEKDENELNTIEQPVLSEHNEENQSFISAEPIVVSSDEEGPIEHKSSEILKLQPKQDHAITNENESTSEPAVSELPLITCESVQASPELCTYNPVMENVSSIIPSNEMDLQLDFVFTSVYIGKIKGASKGCVTFTTKYIKIPFQVSLHEISLLVDTTHLKRFGLWKSKDDDHSKRSHAILFLWVASNYLQEIQTQLENTLLSQQPKSTEFIFLELHSSISQREELKLKDIMTEISTTNGELELSYPLSWVQALPLFQNLSSKDSSFIHYYCASTCSFPAASAEEMKMKSMSQPSNTDTAKPTYTLLQKQSSGCYSLSITSNPDEEWREVRHTGPVQKLIVYPPPPTKGGLAVTSEDLECLEEGEFLNDVIIDFYLKYLILEKASEELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEATYEDFSQTLSQHSQAQQSQPDKKTIDNDLHTSSTLSLGTEDSQSPEMNVSVPKKRCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 1051, "header": "tr|I3LG40-1|I3LG40_PIG Isoform 1 of SUMO specific peptidase 7 OS=Sus scrofa OX=9823 GN=SENP7 PE=3 SV=2 CANONICAL=I3LG40-1" }, "locus": { "chromosome": "13", "start_pos": 157671104, "end_pos": 157521901, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022387.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022387.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023033.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023033.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1A7F6", "url": "https://www.uniprot.org/uniprotkb/A0A8D1A7F6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623734", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623734", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XJP6-1", "protein_name": "Sentrin-specific protease 7", "gene_name": "SENP7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEGRPSPSSHVSFRIPKKKPNNKSEDVQVQSPLARLPGSQHWDYPLREWRLSASNRETSTKGRRQRDCDRCSSNDEESIGQPKVILTNVLRTKIGRKYTQAQPKTDANFSDAGKLQSNQPPSSSVASLKIWQILNPALHSPFLSKRQPQVILTNVLRTRIGRKYVDSHILIDSNLSDAEKLQLGQLASSSVASAQTCQILSSPHESSFLSERSEHCLTKSDVNLSKESERGNVVLTFRRRKLEKKENKSSDELDKKRKNMNSTSSSWKGSSSLDSEKRKRRFSGHISDDCKERIPEKSLLRSKEQRLSSTRSSGCRTPCEDEQDHRSDLVQDSVAQTLERDCKDTPTNNQLRPAHSCSEEAGSDSAPSDLSEKQLIAVSPQVSTIRKVKTDTSQYLNKLRNRNCRSNRPLVSADPIVLSSDDEDRSSEPKEEEGLSEPKCMEQLQDNITDVQEIEQQSDVRFSEKLMEDNVESHTEQLLTKSDDDKCPTNLPSGNIHSEQMKPGLDFEFDSIYIGIFKWSSTGPVRFMTKYITIPFQVALNKNIKLTVDTLDVRRFGLWRNDGGCSSTTVIFIWLSVDYLEKIETQLGKRVSSEPSKCSEFIFLELSQPLPEQDVVRLSELITEISKKNRAPDLLELLSLKQALLLFKDLSPEESSFISSREDLLKQCATKESISFAQEPTFQKPKPKVARPSYALANKQNSGCYSISLSSAPNEEWKEVGESGAVKNLIVYPPPPAKGGLGVTREDLKCLEYGEFLNDVIIDFYLKYLLLEKAPKHLAERTHIFSSFFYKCLTRTEKFSEEDPKVSVAQRRHKRVRTWTRHINIFSKDYIFVPVNEESHWYMAVICFPWLEETVYEEHPHQNSLNLSPLQSENKSEDSVIGSVLAYPEEEMDANRILFSKGGNESAASASGLDSGISKISLNNSKRQVCKRPCILILDSLKAGSVQKTVQVLREYLEVEWEVKRKTRREFSKSTMIDFYPRVPKQDNSSDCGVYLLQYVESFFQNPIVDFEQPVHLEKWFPRQVIRSKREEIQDLILQLHFQQLRGSRS", "length": 1050 }, "evidence": [ { "id": "I3LG40", "url": "https://omabrowser.org/oma/group/I3LG40/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A7MBJ2-1", "protein_name": "Sentrin-specific protease 7", "gene_name": "SENP7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDKGKAGRRRSSAEIVTEGKRKKPSSSELHKITKILNAKPEDVHVQSPLSKLRSSEHWDVSLQGWKRSLRNKVLSLDHKSKKGVRGHPVTSKISPERQLKVMLTNVLWTDLGRKFRKTLPRNDANLCDANKVQSDSLPSTSVDSLETCQKLEPLHQSLNLSERIPRVILTNVLGTKLGRKYIKTSSVTEANLGDTDNLQSEQLSSSSDGSLESCQNLNPHKNFFLSESSSQSSKTDNYAKQTSYTKEKRRDDDGISFMSDTQPKDLSSGSRDCDHLEVGSRNKDDTNSVSRMEPTLISRKRKKRLRSNLPDTHNPASLYKSAEQTKEQENDPAVFTELEKSSENYHEDPKLFEEVTYESIESDFAQLPSDCGQELALSASPQMTSGCSAMETFESSISSDTVGNSTLVVKDENELNTIEKPVLSEHSEGNLSFISAEPIVVSSDEEGPTEQKSSEILKLQPKQDDAISHESESTSEPVVSELPLITCESVQTSSELCSYNPVMENISCLIPKNEMDLQLDFIFTSVYIGKIKGASKGCVTFTTKYIKIPFQVSVHEISLLVDTTHLKRFGLWKNKDDDHSKKSHAILFLWVSSNYLQEIQTQLENSVFSQQSKSTEFIFLELHSSISQREELKLKDIMTEISTTNGELELSYPLSWVQALPLFQNLSSKESSFIHYYCASTCSFPAATTEEMKMKSVSQPSNTDTAKPTYTLLQKQSSGCYSLSITSNPDEEWREVRHTGPVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEVVYEDFPQTIPQYSQAEESHHDSRTIDNDLHTSSALSSGTEDSQSPEMNVTVPKKMCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 1047 }, "evidence": [ { "id": "I3LG40", "url": "https://omabrowser.org/oma/group/I3LG40/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZF42-1", "protein_name": "Sentrin-specific protease 7", "gene_name": "Senp7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDRARPGRRRASSEIVTEGKRKKSSPADLQKITKLLTVKSEDVLAQSPLPKLRGSECWWTRSLRNKVICLDHKTTKAAHGCPPKALPKRHLKVMLTNVLWTDLGREFRKTLPRNDAKLCDTSKVQSDSLPSTSVDSIETCQRLDPLHQSLNLSERIPRVILTDIRQTELGRKYLKIPSVTEASLSDTASPKSEELSSSADGSLESCQNVNHLKSFLSERGSKPSRTGDISAKEAANGRQEQGDDGDIAPEMVTPQSKDFNSGNKGDYHEEGTSNKNTSYSHSETDHTPVSRKRKKRGRSNFHNSHNPKSSVDKSTEYIKEEENESTVSSKLEESNEDSHQDPAPPEGLTPDSLETEATNVCSFVVQEPDVSAASGRACSPNKSSESSVSSEVAENSSAAEKGEASTVKEAPPPGGNSEENQLLMSAEPIVVSSDEEGPVEHKNSVILKLQPSQDYEFMSENQTTSDPQLSELMLGACESVQVSSELCPYNPDMENISCINPNSEMDLKLDFIFTCVYIGKIKGTSKGCITFTKKYIKIPFQVSMNEISLTVDTARLKRFGLWESKDDDHSKRSHAILFLWVSSNYLQDIQTQLENPMLSQQSKANEFIFLELNSPISQREELKLKDIMMEIGATNGELQLSCPLPWVQAFPLFQDLSPQEISFLHYYCASASSFPAVAGADMKKKPVSQPSNADVVKPTYTFLHKQSSGCYSLSITSSPDEEWREVRNTGPVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQEFQDQQSQHDNKTIDNDPHTTSTVFTSAEESQSTETSMSVPKKMCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFQDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 1037 }, "evidence": [ { "id": "I3LG40", "url": "https://omabrowser.org/oma/group/I3LG40/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BUH8-1", "protein_name": "Sentrin-specific protease 7", "gene_name": "Senp7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDRARPGRRRASSEIVTEGKRKKSSPADLQKITKLLTVKSEDVLAQSPLSKLRGSECWWTRSLRNKVICLDHKKPKAARGCPPKGLPKRHLRVMLTNVLWTDLGREFRKTLPRKDANLCAPSKVQSDSLPSTSVDSIETCQRLDPLHQSLNLSERTPRVILTDIRQTELGRKYLKIPPVTEASLSDTANLKSEQLSSSSDGSLESCQSVNHHKSFLSESGPKPSRTGDVPAKEAACGGQKQGDDGGVTPEMAAPHPKDFNTGNKGCDYLEEGTSNKNTSYSYSEMDHTPVSRKRKKRGRSNFHDSHNSKTSLDKPTEHTKEEENDSSVSRKLEESGEDSHQDPAPPEGLAPESLESEATNLRSFAAGQEPDASAASGRASSPNKSLESSASSEVSENSSVAVKGEALTLKEASPPGGSSEESQLLISAEPIVVSSDEEGPVEHKNSVILKLQPPHEIMSENQGTSDPQLSELTLGACESVQVTSELFPYNPDVENISCIKSNSEMDLKLDFIFTCVYIGKIKGTPKGCVTFTKKYIKIPFQVSTNEISLTVDTARLKRFGLWESKDEDHSKRSHAILFLWLSSDYLQDIQTQLENPMLSQQSKANEFIFLELNSSISQREELKLKDIMMEISTKNGNLHLSCPLPWVQALPLFQDLSPQEISFLHYYYASASALPTAAGADMKKKSVSQPSNSDTIKPTYTFLHKQSSGCYSLSITSSPEEEWQEVRNTGPVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDCPQTVSQQFQGQQSQHDHKMTDNDPHTTSTVSTSAEDSQSTEVNMSVPKKMCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFQDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGGSC", "length": 1037 }, "evidence": [ { "id": "I3LG40", "url": "https://omabrowser.org/oma/group/I3LG40/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BQF6-1", "protein_name": "Sentrin-specific protease 7", "gene_name": "SENP7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDKRKLGRRPSSSEIITEGKRKKSSSDLSEIRKMLNAKPEDVHVQSPLSKFRSSERWTLPLQWERSLRNKVISLDHKNKKHIRGCPVTSKSSPERQLKVMLTNVLWTDLGRKFRKTLPRNDANLCDANKVQSDSLPSTSVDSLETCQKLEPLRQSLNLSERIPRVILTNVLGTELGRKYIRTPPVTEGSLSDTDNLQSEQLSSSSDGSLESYQNLNPHKSCYLSERGSQRSKTVDDNSAKQTAHNKEKRRKDDGISLLISDTQPEDLNSGSRGCDHLEQESRNKDVKYSDSKVELTLISRKTKRRLRNNLPDSQYCTSLDKSTEQTKKQEDDSTISTEFEKPSENYHQDPKLPEEITTKPTKSDFTKLSSLNSQELTLSNATKSASAGSTTETVENSNSIDIVGISSLVEKDENELNTIEKPILRGHNEGNQSLISAEPIVVSSDEEGPVEHKSSEILKLQSKQDRETTNENESTSESALLELPLITCESVQMSSELCPYNPVMENISSIMPSNEMDLQLDFIFTSVYIGKIKGASKGCVTITKKYIKIPFQVSLNEISLLVDTTHLKRFGLWKSKDDNHSKRSHAILFFWVSSDYLQEIQTQLEHSVLSQQSKSSEFIFLELHNPVSQREELKLKDIMTEISIISGELELSYPLSWVQAFPLFQNLSSKESSFIHYYCVSTCSFPAGVAVAEEMKLKSVSQPSNTDAAKPTYTFLQKQSSGCYSLSITSNPDEEWREVRHTGLVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTTSTLSLSAEDSQSTESNMSVPKKMCKRPCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGSSS", "length": 1050 }, "evidence": [ { "id": "I3LG40", "url": "https://omabrowser.org/oma/group/I3LG40/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "protein desumoylation", "id": "GO:0016926", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016926", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "antiviral innate immune response", "id": "GO:0140374", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140374", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "cysteine-type peptidase activity", "id": "GO:0008234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008234", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "SUMO-specific endopeptidase activity", "id": "GO:0070139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070139", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "presynaptic cytosol", "id": "GO:0099523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099523", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" }, { "name": "postsynaptic cytosol", "id": "GO:0099524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099524", "evidence": [ { "database": "UniProtKB", "id": "I3LG40", "url": "https://www.uniprot.org/uniprotkb/I3LG40" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 311, "end_pos": 313, "annotation": "n_glycosylation_sequon" }, { "start_pos": 317, "end_pos": 319, "annotation": "n_glycosylation_sequon" }, { "start_pos": 434, "end_pos": 436, "annotation": "n_glycosylation_sequon" }, { "start_pos": 475, "end_pos": 477, "annotation": "n_glycosylation_sequon" }, { "start_pos": 509, "end_pos": 511, "annotation": "n_glycosylation_sequon" }, { "start_pos": 669, "end_pos": 671, "annotation": "n_glycosylation_sequon" }, { "start_pos": 819, "end_pos": 821, "annotation": "n_glycosylation_sequon" }, { "start_pos": 826, "end_pos": 828, "annotation": "n_glycosylation_sequon" }, { "start_pos": 857, "end_pos": 859, "annotation": "n_glycosylation_sequon" }, { "start_pos": 923, "end_pos": 925, "annotation": "n_glycosylation_sequon" }, { "start_pos": 989, "end_pos": 991, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", 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Catalyzes two of the four reactions in fatty acid degradation: hydration of 2-enoyl-CoA (trans-2-enoyl-CoA) to produce (3R)-3-hydroxyacyl-CoA, and dehydrogenation of (3R)-3-hydroxyacyl-CoA to produce 3-ketoacyl-CoA (3-oxoacyl-CoA), which is further metabolized by SCPx. 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"https://www.ebi.ac.uk/interpro/entry/IPR002347", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002539", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002539", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003033", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003033", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020904", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020904", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029069", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029069", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036527", "database": "InterPro", "categories": [ "Protein 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F822-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F822-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEF8-1", "url": "https://www.uniprot.org/uniprotkb/I3LEF8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASMLNFYGRVVLVTGAGGGLGRTYALAFAERGASVVVNDLGGDMKGVGKGSLAADKVVEEIRRKGGKAVANYDSVEAGEKIVKAALDAFGRIDVVVNNAGILRDRSFSRISDEDWDMIQRVHLRGSFMVTRAAWDHMKKQNFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNSLAVEGKKNNIHCNTVAPVAGSRMTQGFLPEDLIEALKPEYVAPLVLWLCHESCEENGSVFEVGAGWIGKLRWERTLGALVRQKNQPMTPEAVKANWTKICDFDNATKPQRIQDSVSTVIEALSKIDSSDGGISANNLSHATSAAPSGLVEAVGYKFPPFSSSYTEVDTIMYALGVGASIKEPKDLKFIYEGNSDFSCLPTFGVILAQKSLGGGGLAEIPGLSVNFTKVLHGEHYLELYKPLPNAGDLKCEAVVADVLDKRSGLVILIDVYSYSGKELICYNQFSVFVMGSGGFGGKRTSDKDKVAVAIPSRPPDAILTDTTSLNQAALYRLSGDWNPLHIDPDFASLAGFDRPILHGLCTFGFSARHVLQQYADRDVLRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDTVISNAYVDLVPTSDTLAKIPSEGGDLQSNLVFEEIGRRLQDIGQEMVKKVNAVFEWHITKGEKIAAKWTIDLKNGAGKVYQGPAKGSADATFILSDEVFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKI", "length": 737, "header": "tr|I3LEF8-1|I3LEF8_PIG Isoform 1 of Peroxisomal multifunctional enzyme type 2 OS=Sus scrofa OX=9823 GN=HSD17B4 PE=1 SV=2 CANONICAL=I3LEF8-1" }, "isoforms": [ { "isoform_ac": "A0A287A3B5-1", "url": "https://www.uniprot.org/uniprotkb/I3LEF8/entry#A0A287A3B5-1", "sequence": { "sequence": "MASMLNFYGRVVLVTGAGGGLGRTYALAFAERGASVVVNDLGGDMKGVGKGSLAADKVVEEIRRKGGKAVANYDVVVNNAGILRDRSFSRISDEDWDMIQRVHLRGSFMVTRAAWDHMKKQNFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNSLAVEGKKNNIHCNTVAPVAGSRMTQGFLPEDLIEALKPEYVAPLVLWLCHESCEENGSVFEVGAGWIGKLRWERTLGALVRQKNQPMTPEAVKANWTKICDFDNATKPQRIQDSVSTVIEALSKIDSSDGGISANNLSHATSAAPSGLVEAVGYKFPPFSSSYTEVDTIMYALGVGASIKEPKDLKFIYEGNSDFSCLPTFGVILAQKSLGGGGLAEIPGLSVNFTKVLHGEHYLELYKPLPNAGDLKCEAVVADVLDKRSGLVILIDVYSYSGKELICYNQFSVFVMGSGGFGGKRTSDKDKVAVAIPSRPPDAILTDTTSLNQAALYRLSGDWNPLHIDPDFASLAGFDRPILHGLCTFGFSARHVLQQYADRDVLRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDTVISNAYVDLVPTSDTLAKIPSEGGDLQSNLVFEEIGRRLQDIGQEMVKKVNAVFEWHITKGEKIAAKWTIDLKNGAGKVYQGPAKGSADATFILSDEVFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKI", "length": 717, "header": "tr|A0A287A3B5-1|A0A287A3B5_PIG Computationally mapped isoform of 17-beta-hydroxysteroid dehydrogenase 4 OS=Sus scrofa OX=9823 GN=HSD17B4 PE=1 SV=1 CANONICAL=I3LEF8-1" }, "locus": { "chromosome": "2", "start_pos": 123400691, "end_pos": 123313552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037522.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037522.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038448.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038448.1" } ] } }, { "isoform_ac": "A0A287AMG9-1", "url": "https://www.uniprot.org/uniprotkb/I3LEF8/entry#A0A287AMG9-1", "sequence": { "sequence": "MASMLNFYGRVVLVTGAGGVNDLGGDMKGVGKGSLAADKVVEEIRRKGGKAVANYDSVEAGEKIVKAALDAFGRIDVVVNNAGILRDRSFSRISDEDWDMIQRVHLRGSFMVTRAAWDHMKKQNFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNSLAVEGKKNNIHCNTVAPVAGSRMTQGFLPEDLIEALKPEYVAPLVLWLCHESCEENGSVFEVGAGWIGKLRWERTLGALVRQKNQPMTPEAVKANWTKICDFDNATKPQRIQDSVSTVIEALSKIDSSDGGISANNLSHATSAAPSGLVEAVGYKFPPFSSSYTEVDTIMYALGVGASIKEPKDLKFIYEGNSDFSCLPTFGVILAQKSLGGGGLAEIPGLSVNFTKVLHGEHYLELYKPLPNAGDLKCEAVVADVLDKRSGLVILIDVYSYSGKELICYNQFSVFVMGSGGFGGKRTSDKDKVAVAIPSRPPDAILTDTTSLNQAALYRLSGDWNPLHIDPDFASLAGFDRPILHGLCTFGFSARHVLQQYADRDVLRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDTVISNAYVDLVPTSDTLAKIPSEGGDLQSNLVFEEIGRRLQDIGQEMVKKVNAVFEWHITKGEKIAAKWTIDLKNGAGKVYQGPAKGSADATFILSDEVFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKI", "length": 719, "header": "tr|A0A287AMG9-1|A0A287AMG9_PIG Computationally mapped isoform of Peroxisomal multifunctional enzyme type 2 OS=Sus scrofa OX=9823 GN=HSD17B4 PE=1 SV=1 CANONICAL=I3LEF8-1" }, "locus": { "chromosome": "2", "start_pos": 123400691, "end_pos": 123313552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061615.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061615.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045203.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045203.2" } ] } }, { "isoform_ac": "A0A5G2QQI1-1", "url": "https://www.uniprot.org/uniprotkb/I3LEF8/entry#A0A5G2QQI1-1", "sequence": { "sequence": "MASMLNFYGRVVLVTGAGGGLGRTYALAFAERGASVVVNDLGGDMKGVGKGSLAADKVVEEIRRKGGKAVANYDMIQRVHLRGSFMVTRAAWDHMKKQNFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNSLAVEGKKNNIHCNTVAPVAGSRMTQGFLPEDLIEALKPEYVAPLVLWLCHESCEENGSVFEVGAGWIGKLRWERTLGALVRQKNQPMTPEAVKANWTKICDFDNATKPQRIQDSVSTVIEALSKIDSSDGGISANNLSHATSAAPSGLVEAVGYKFPPFSSSYTEVDTIMYALGVGASIKEPKDLKFIYEGNSDFSCLPTFGVILAQKSLGGGGLAEIPGLSVNFTKVLHGEHYLELYKPLPNAGDLKCEAVVADVLDKRSGLVILIDVYSYSGKELICYNQFSVFVMGSGGFGGKRTSDKDKVAVAIPSRPPDAILTDTTSLNQAALYRLSGDWNPLHIDPDFASLAGFDRPILHGLCTFGFSARHVLQQYADRDVLRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDTVISNAYVDLVPTSDTLAKIPSEGGDLQSNLVFEEIGRRLQDIGQEMVKKVNAVFEWHITKGEKIAAKWTIDLKNGAGKVYQGPAKGSADATFILSDEVFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKI", "length": 694, "header": "tr|A0A5G2QQI1-1|I3LEF8_PIG Computationally mapped isoform of Peroxisomal multifunctional enzyme type 2 OS=Sus scrofa OX=9823 GN=HSD17B4 PE=1 SV=1 CANONICAL=I3LEF8-1" }, "locus": { "chromosome": "2", "start_pos": 123400691, "end_pos": 123313552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075989.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075989.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067157.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067157.1" } ] } }, { "isoform_ac": "A0A8W4F822-1", "url": "https://www.uniprot.org/uniprotkb/I3LEF8/entry#A0A8W4F822-1", "sequence": { "sequence": "DALIIEFYFQLIFLRLELNSYLFLHFGKGSLAADKVVEEIRRKGGKAVANYDVVVNNAGILRDRSFSRISDEDWDMIQRVHLRGSFMVTRAAWDHMKKQNFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNSLAVEGKKNNIHCNTVAPVAGSRMTQGFLPEDLIEALKPEYVAPLVLWLCHESCEENGSVFEVGAGWIGKLRWERTLGALVRQKNQPMTPEAVKANWTKICDFDNATKPQRIQDSVSTVIEALSKIDSSDGGISANNLSHATSAAPSGLVEAVGYKFPPFSSSYTEVDTIMYALGVGASIKEPKDLKFIYEGNSDFSCLPTFGVILAQKSLGGGGLAEIPGLSVNFTKVLHGEHYLELYKPLPNAGDLKCEAVVADVLDKRSGLVILIDVYSYSGKELICYNQFSVFVMGSGGFGGKRTSDKDKVAVAIPSRPPDAILTDTTSLNQAALYRLSGDWNPLHIDPDFASLAGFDRPILHGLCTFGFSARHVLQQYADRDVLRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDTVISNAYVDLVPTSDTLAKIPSEGGDLQSNLVFEEIGRRLQDIGQEMVKKVNAVFEWHITKGEKIAAKWTIDLKNGAGKVYQGPAKGSADATFILSDEVFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKI", "length": 695, "header": "tr|A0A8W4F822-1|I3LEF8_PIG Computationally mapped isoform of Peroxisomal multifunctional enzyme type 2 OS=Sus scrofa OX=9823 GN=HSD17B4 PE=1 SV=1 CANONICAL=I3LEF8-1" }, "locus": { "chromosome": "2", "start_pos": 123400691, "end_pos": 123326864, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097174.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097174.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075447.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075447.1" } ] } }, { "isoform_ac": "I3LEF8-1", "url": "https://www.uniprot.org/uniprotkb/I3LEF8/entry#I3LEF8-1", "sequence": { "sequence": "MASMLNFYGRVVLVTGAGGGLGRTYALAFAERGASVVVNDLGGDMKGVGKGSLAADKVVEEIRRKGGKAVANYDSVEAGEKIVKAALDAFGRIDVVVNNAGILRDRSFSRISDEDWDMIQRVHLRGSFMVTRAAWDHMKKQNFGRIIMTSSAAGIYGNFGQANYSAAKLGLLGLSNSLAVEGKKNNIHCNTVAPVAGSRMTQGFLPEDLIEALKPEYVAPLVLWLCHESCEENGSVFEVGAGWIGKLRWERTLGALVRQKNQPMTPEAVKANWTKICDFDNATKPQRIQDSVSTVIEALSKIDSSDGGISANNLSHATSAAPSGLVEAVGYKFPPFSSSYTEVDTIMYALGVGASIKEPKDLKFIYEGNSDFSCLPTFGVILAQKSLGGGGLAEIPGLSVNFTKVLHGEHYLELYKPLPNAGDLKCEAVVADVLDKRSGLVILIDVYSYSGKELICYNQFSVFVMGSGGFGGKRTSDKDKVAVAIPSRPPDAILTDTTSLNQAALYRLSGDWNPLHIDPDFASLAGFDRPILHGLCTFGFSARHVLQQYADRDVLRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDTVISNAYVDLVPTSDTLAKIPSEGGDLQSNLVFEEIGRRLQDIGQEMVKKVNAVFEWHITKGEKIAAKWTIDLKNGAGKVYQGPAKGSADATFILSDEVFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKI", "length": 737, "header": "tr|I3LEF8-1|I3LEF8_PIG Isoform 1 of Peroxisomal multifunctional enzyme type 2 OS=Sus scrofa OX=9823 GN=HSD17B4 PE=1 SV=2 CANONICAL=I3LEF8-1" }, "locus": { "chromosome": "2", "start_pos": 123400691, "end_pos": 123313552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025027.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025027.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022446.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022446.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQI1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQI1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRQKNHPMTPEAVKANWKKICDFENASKPQSIQESTGSIIEVLSKIDSEGGVSANHTSRATSTATSGFAGAIGQKLPPFSYAYTELEAIMYALGVGASIKDPKDLKFIYEGSSDFSCLPTFGVIIGQKSMMGGGLAEIPGLSINFAKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYSEKELICHNQFSLFLVGSGGFGGKRTSDKVKVAVAIPNRPPDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQFADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDIVISNAYVDLAPTSGTSAKTPSEGGKLQSTFVFEEIGRRLKDIGPEVVKKVNAVFEWHITKGGNIGAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKL", "length": 736 }, "evidence": [ { "id": "I3LEF8", "url": "https://omabrowser.org/oma/group/I3LEF8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P51660-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "Hsd17b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVIVNDLGGDFKGIGKGSSAADKVVAEIRRKGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIHRVHLRGSFQVTRAAWDHMKKQNYGRILMTSSASGIYGNFGQANYSAAKLGILGLCNTLAIEGRKNNIHCNTIAPNAGSRMTETVLPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWEKICDFSNASKPQTIQESTGGIVEVLHKVDSEGISPNRTSHAAPAATSGFVGAVGHKLPSFSSSYTELQSIMYALGVGASVKNPKDLKFVYEGSADFSCLPTFGVIVAQKSMMNGGLAEVPGLSFNFAKALHGEQYLELYKPLPRSGELKCEAVIADILDKGSGVVIVMDVYSYSGKELICYNQFSVFVVGSGGFGGKRTSEKLKAAVAVPNRPPDAVLRDATSLNQAALYRLSGDWNPLHIDPDFASVAGFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVHETGDVVISNAYVDLVPASGVSTQTPSEGGELQSALVFGEIGRRLKSVGREVVKKANAVFEWHITKGGTVAAKWTIDLKSGSGEVYQGPAKGSADVTIIISDEDFMEVVFGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKL", "length": 735 }, "evidence": [ { "id": "I3LEF8", "url": "https://omabrowser.org/oma/group/I3LEF8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q02207-1", "protein_name": "Peroxisomal hydratase-dehydrogenase-epimerase", "gene_name": "FOX2", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MPGNLSFKDRVVVITGAGGGLGKVYALAYASRGAKVVVNDLGGTLGGSGHNSKAADLVVDEIKKAGGIAVANYDSVNENGEKIIETAIKEFGRVDVLINNAGILRDVSFAKMTEREFASVVDVHLTGGYKLSRAAWPYMRSQKFGRIINTASPAGLFGNFGQANYSAAKMGLVGLAETLAKEGAKYNINVNSIAPLARSRMTENVLPPHILKQLGPEKIVPLVLYLTHESTKVSNSIFELAAGFFGQLRWERSSGQIFNPDPKTYTPEAILNKWKEITDYRDKPFNKTQHPYQLSDYNDLITKAKKLPPNEQGSVKIKSLCNKVVVVTGAGGGLGKSHAIWFARYGAKVVVNDIKDPFSVVEEINKLYGEGTAIPDSHDVVTEAPLIIQTAISKFQRVDILVNNAGILRDKSFLKMKDEEWFAVLKVHLFSTFSLSKAVWPIFTKQKSGFIINTTSTSGIYGNFGQANYAAAKAAILGFSKTIALEGAKRGIIVNVIAPHAETAMTKTIFSEKELSNHFDASQVSPLVVLLASEELQKYSGRRVIGQLFEVGGGWCGQTRWQRSSGYVSIKETIEPEEIKENWNHITDFSRNTINPSSTEESSMATLQAVQKAHSSKELDDGLFKYTTKDCILYNLGLGCTSKELKYTYENDPDFQVLPTFAVIPFMQATATLAMDNLVDNFNYAMLLHGEQYFKLCTPTMPSNGTLKTLAKPLQVLDKNGKAALVVGGFETYDIKTKKLIAYNEGSFFIRGAHVPPEKEVRDGKRAKFAVQNFEVPHGKVPDFEAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTLGISAKALFEHYGPYEELKVRFTNVVFPGDTLKVKAWKQGSVVVFQTIDTTRNVIVLDNAAVKLSQAKSKL", "length": 900 }, "evidence": [ { "id": "I3LEF8", "url": "https://omabrowser.org/oma/group/I3LEF8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "peroxisomal matrix", "id": "GO:0005782", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005782", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "fatty acid beta-oxidation", "id": "GO:0006635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006635", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "fatty acid metabolic process", "id": "GO:0006631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006631", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "estrogen metabolic process", "id": "GO:0008210", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008210", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "fatty acid beta-oxidation using acyl-CoA oxidase", "id": "GO:0033540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033540", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "fatty acid biosynthetic process", "id": "GO:0006633", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006633", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "androgen metabolic process", "id": "GO:0008209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008209", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "medium-chain fatty-acyl-CoA metabolic process", "id": "GO:0036112", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036112", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "very long-chain fatty-acyl-CoA metabolic process", "id": "GO:0036111", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036111", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 9, "go_terms": [ { "name": "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "id": "GO:0016616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016616", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "(2E)-enoyl-CoA hydratase activity", "id": "GO:0080023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080023", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity", "id": "GO:0033989", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033989", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "isomerase activity", "id": "GO:0016853", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016853", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "estradiol 17-beta-dehydrogenase [NAD(P)+] activity", "id": "GO:0004303", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004303", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "enoyl-CoA hydratase activity", "id": "GO:0004300", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004300", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity", "id": "GO:0003857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003857", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" }, { "name": "(3R)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity", "id": "GO:0106386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106386", "evidence": [ { "database": "UniProtKB", "id": "I3LEF8", "url": "https://www.uniprot.org/uniprotkb/I3LEF8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 163, "end_pos": 165, "annotation": "n_glycosylation_sequon" }, { "start_pos": 233, "end_pos": 235, "annotation": "n_glycosylation_sequon" }, { "start_pos": 272, "end_pos": 274, "annotation": "n_glycosylation_sequon" }, { "start_pos": 281, "end_pos": 283, "annotation": "n_glycosylation_sequon" }, { "start_pos": 313, "end_pos": 315, "annotation": "n_glycosylation_sequon" }, { "start_pos": 401, "end_pos": 403, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "18933", "name": "", "equation": "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestan-26-oyl-CoA = (24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-en-26-oyl-CoA + H2O", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "18933", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/18933" } ] }, { "id": "26526", "name": "", "equation": "a (3R)-3-hydroxyacyl-CoA = a (2E)-enoyl-CoA + H2O", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "26526", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/26526" } ] }, { "id": "32711", "name": "", "equation": "a (3R)-3-hydroxyacyl-CoA + NAD(+) = a 3-oxoacyl-CoA + NADH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "32711", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/32711" } ] }, { "id": "39159", "name": "", "equation": "(3R)-hydroxyhexadecanoyl-CoA = (2E)-hexadecenoyl-CoA + H2O", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "39159", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/39159" } ] }, { "id": "40187", "name": "", "equation": "(2E)-octenoyl-CoA + H2O = (3R)-hydroxyoctanoyl-CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40187", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40187" } ] }, { "id": "40191", "name": "", "equation": "(3R)-hydroxyoctanoyl-CoA + NAD(+) = 3-oxooctanoyl-CoA + NADH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40191", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40191" } ] }, { "id": "40243", "name": "", "equation": "(3R)-hydroxyhexadecanoyl-CoA + NAD(+) = 3-oxohexadecanoyl-CoA + NADH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40243", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40243" } ] }, { "id": "40255", "name": "", "equation": "(2E)-hexadecenedioyl-CoA + H2O = (3R)-hydroxyhexadecanedioyl-CoA", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40255", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40255" } ] }, { "id": "40263", "name": "", "equation": "(3R)-hydroxyhexadecanedioyl-CoA + NAD(+) = 3-oxohexadecanedioyl-CoA + NADH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40263", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40263" } ] }, { "id": "45832", "name": "", "equation": "(3R)-3-hydroxydecanoyl-CoA + NAD(+) = 3-oxodecanoyl-CoA + NADH + H(+)", 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"MAELFMECEEEELEPWQKKVKEVDDDDDDEPIFVGEISGSKPAISNILNRVNPSSYSRGIKNGALSRGITAAFKSTSQHYTNPTSNPVAASPVNFHPESRSSDSSVIVQPLSKPGYITNSSRVVTNNSSELLFDLTQDTGLPHYQGGTTLSIAGINESSFLSKRPSTSEVNSVNPKKSKPSEGVSGTNSSAVLSSVKSLSVTSSQAMPSKGTNTSSNQSKNGTPFPRACPKCNIHFNLLDPLKNHMKYCCPDMINNFLGLAKTEFSSTANKNKTIDSEKGKLIMLVNDFYYGKHEGDVQEEQKTYTTFKCFSCLKILKNNIRFMNHMKHHLELEKQSSESWENHTTCQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETEHILLQHMKDNHKPGEMPYICQVCNYRSSSFSDVETHFRTSHENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKMDHKTQHHRTFIKPKQLEGLPPGTKVTIRASVGPLQSGSSTTPSISASTSTLQLSPPRTKNITAKNPAKSNTSKPNITKSIASKPNTSKPNGSKPKYKSKISNMQKKQSTLASSNKKSKVNTALRNLRYRRGVHKCIECCSEIKDFANHFPTYVHCSFCRYNTSCSKAYVNHMMSFHSNRPSKRFCIFKKYSEDLRGITLVCLNCDFLADVSGLDNMATHLSLHETHTCQVVIEKVSVCIPTSEHLSELKNQAPTKEQVPVSEEIARPNMAEGETETSSSESKQDEASSEEIKNGCNAHLFEGPSTTKSEEGMSVSDKENDTCLEDQETGSKHVFSYDSVTDADKVEKEKQIEHICQETKLKMCRSSENIIACDQIEECNASEARLSLKNIKDLRLTSGDVSIDQFLRKRDEPGSVSSDVSEQGSVHLEPLTPSEVLEYEATEILHKGSGDPSAKTDEVVSDHTDVPGENSLSTTETSGDLADEKERRS", "length": 966, "header": "tr|I3LEU1-1|I3LEU1_PIG Isoform 1 of Zinc finger protein 280D OS=Sus scrofa OX=9823 GN=ZNF280D PE=4 SV=2 CANONICAL=I3LEU1-1" }, "locus": { "chromosome": "1", "start_pos": 115343337, "end_pos": 115244400, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043281.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043281.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055750.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055750.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513772", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513772", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5NX23-1", "protein_name": "Zinc finger protein 280D", "gene_name": "ZNF280D", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAELFMECEEEELEPWQKRVKEVEEDDDDDEPIFIGEISSSKPASTYILNRINFSSSRRQIQNGAPSRGTVTSFKSDSHHYVTPASSPSAIPVSSVFQSVSRSTASSVAVQPLSRPVNVSGASQTLQRPVAGCLSTQQMTRSSSGPSQPVSRPVTIPVTTQPVSRNITVPLVAQPVSRPLTTVTTQPIILNQDYIMDSPPDAPDNTSGILFGVRQNSGVPQYQTEPTVSVTDTNTASSNIKNGGPFPRACPKCNIHFNLMDPLKNHMKYCCPDLVNDFFLGVVQTECSTATSKTTEYEKGKLIMLVNDFYYGKHEGDTQQVQQEQKTHTTFKCFSCLKVLKNNIRFMNHMKHHLELEKQSSESWESHTTCQHCYRQFPTPFQLQCHIESTHTPYESSTICKICELSFETEQVLLQHMKDNHKPGEMPYVCQVCNYRSSAFSDVETHFRTVHENTKHLLCPFCLKVIKIGAPYMHHYMRHQKKGIYRCTKCRLQFLTCKEKMDHKTQHHRTFRKPKQLEGLPPGTKVTIRASIGSLQSGSSVSTSTSTFQLSPKAKNTTARNHSRSNSNKSKARSKPTTTLKKQNAWTNSSSKKKKVTNTALHNLRCRLGAHKCIECYSEIKDFASHFPAYVHCSLCRYNTSCSKAYVNHMMSFHSARPSKRFWIYKKHSEDLRGVTVVCLNCDFLTDGSGLDRMATHLSESHTHACQVIIENVSVDLPTAEQVSDKQGLDSSEETKEGNRNQNEVASVEKNEENSSLSDTENVPNLELPDNSTKKSLHGKGTRCDSDHHKQLVGEKQKCIHGESELKTCQSSDYVVLTDQTKVQNLDKTTLSAMNARDLKLTLGEDVSFEQFLRKRNEPESVNSDMSEQGSIHLEPLTPSEVLEHEATEILQKGNIAPSSKQAEQLSEQTDKTSQEGSPSRMETTVNKTDENEAS", "length": 935 }, "evidence": [ { "id": "I3LEU1", "url": "https://omabrowser.org/oma/group/I3LEU1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8C2QIB6-1", "protein_name": "Zinc finger protein 280D isoform X1", "gene_name": "Znf280d", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGDCSFQPKDNLKMAELFMECEEEELEPWQKKVKEVEEDDDDEPIFVAEIASSKPAISNILNRVNSSSRGIKNGALNRGFTTSFKPTSQRFPNPASNPVAALPVNFHPDSRSSDCSVIVQSFSKPGYVTNSPTVLSNNSSELLFDLTQDTGLSHYPAAPALSIAGLNESSFSSKRPFSDISSVNSKKPKPSDNISGADASSVLSSEKPPSVLSLQVAPLQGANCSSNQSKNGTTFPRACPKCNIHFNLLDPLKKHMTYCCPDMINNFLGLNKIEISNTANEAKTLDSEKGKLIMLVNDFYYGKHEGDVQEEQKTHTTFKCFSCLKVLKNNIRFMNHMKHHLELEKQSSESWEKHTTCQHCYRQFPTPFQLQCHIESTHTLHDFSTICKICELSFETEQNLLQHMKDNHKPGEMPYICQVCNYRSSLFSDVESHFKTAHENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKMDHKTQHHRTFVKPKQLEGLPPGTKVTIRASVGPLQSGPSATPSISDASTSTLQLSPPRTENVTSKNPTTLDTSTQNTTVSEPSKPNESKSNGNKSKNRSKVCNTQKKQSTVANSNKKSKVNTALRNLRLRRGVHECIECCSEIKDFANHFPTYVHCSFCRYNTSCSKAYVNHMMSFHSNRPSKRFCIFKKHSENLRGISLVCLNCDFLTDVSGLDNMATHLSQHETHTCQVLIEKVSVCIPTSERLSELKTEAPTKGQESVSKETARHNTAEGETGASPSEGKQNKAPSSEGSIGRDASVCEAAAAAADCEGNVAVSDTENESRSKSIFSHGSDAGAENMRKEEQTQHTCQEMELKVHQSSEHMDSWDQTKEHDSPAADFPSETGQDSQLTSGVAGIDQFLRQREKPESVSSDASEQGSVGLEPLTPSEVLEYEATEMLHKDDNSSANSNDTVSDETGGSPGGSRAETAVDLAEGKERS", "length": 967 }, "evidence": [ { "id": "I3LEU1", "url": "https://omabrowser.org/oma/group/I3LEU1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0ABK0LVH6-1", "protein_name": "Zinc finger protein 280D", "gene_name": "Zfp280d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGVGNRRTWVLQKSNNLKMAELFMECEEEELEPWQKKVKEVEEDDDDEPIFVAEIASSKPAISNILNRVNPSSHSRGIKNGILNRGFTASFKPTSQRCPNSASNPVAALPVNFHPESRSSDSSVIVQPFSKPGYVTNSPRVLSSNPSELLFDLTQDTGLSHYQGGPTLSIAGLNETSFLSKRPSGSDISSVNPKKPKPNENISGTDASSVVSSEKSPSVMSLQVVPSQGTNCSSNQSKNGTTFPRACPKCNIHFNLLDPLKNHMTYCCPDMINNFLGLTKTDNLNSANEAKTLDSEKGKLIMLVNDFYYGKYEGDVQEEQKTHTTFKCFSCLKVLKNNIRFMNHMKHHLELEKQSSESWEKHTTCQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETEQILLQHMKDNHKPGEMPYICQVCNYRSSLFSEVESHFRTSHENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKMDHKTQHHRTFVKPKQLEGLPPGTKVTIRASVAPLQSGSSVTPSISASTSTLQLSPPRTENVTAKNHVKLNTSTPNTTISDPSKTNEIKSNGSKSKNRSKVSNMQKKQSTLSNSNKKSKVNTALRNLRLRRGVHECIECSSEVKDFANHFPTYVHCSFCRYNTSCSKAYVNHMMSFHSNRPSKRYCIFKKHSENLRGISLVCLNCDFLTDVSGLDNMATHLSQHETHTCQVLVEKVSVCIPTSERLSELKTEAPTKGQESVSKETARHSTAEREPGASHSESKQDKAPPSEDDTGRDASVCEAAAAANRERNVTASDTEDVRTSNDVLSRGPEVGTDNMEKEEQAHHTCQEMELKRDQSSESTDDQSKEHSPTEAELSSEISQDLQLTPEGVGLGQCLRQGEEPESVNSDASEQDSVRLEPLTPSEVLEFEATEVCHSGEDPSASTSDAVSGGTGGSPGGSSPRRAESAADLAGGQEGS", "length": 974 }, "evidence": [ { "id": "I3LEU1", "url": "https://omabrowser.org/oma/group/I3LEU1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FE8-1", "protein_name": "Zinc finger protein 280D", "gene_name": "Znf280d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVTTYIKSDLQLDGRQFFQPKDNLKMAELFMECEEEELEPWQKKVKEVEEDDDDEPIFVAEIASSKPAISNILNRVNPSSHSRGIKNGILNRGFTASFKPTSQRCLNSASNPVAALPVNFHPESRSSDSSVIVQPFSKPGYVTNSPRVLSNNSSELLFDLTQDTGLSHYQGGPTLSIAGLNETSFLSKRPSGSDISSVNPKKPKPSENTSGIDASSVISSEKSPSVISLQVVPSQGANCSSSQSKNGTTFPRACPKCDIHFNLLDPLKNHMTYCCPDMINNFLGLTKADNLNSANEAKTLESEKGKLIMLVNDFYYGKHEGDVLEEQKTHTTFKCFSCLKVLKNNIRFMNHMKHHLELEKQSSESWEKHTTCQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETEQILLQHMKDNHKPGEMPYICQVCNYRSSLFSEVESHFRTSHENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKMDHKTQHHRTFVKPKQLEGLPPGTKVTIRASVGPLQSGSSVTPSISPSTSTLQLSPPEPDNVTAKNHVKLTTSTPNTTISDPSKANETKSNGSKSKNKSKVSNMQKKQSTLSSSNKKSKVNTALRNLRLRRGVHECIECSSEVKDFANHFPTYVHCSFCRYNTSCSKAYVNHMMSFHSNRPSKRYCIFKKHSENLRGISLVCLNCDFLTDVSGLDNMATHLSQHETHSCRVLVEQVSVCIPTSERLSEIKTEAPTKGQEPVSKETARHSRAEGEPGASHSGSKQDKVPSSEEGTGCDASVCEAAAATHCEKDVTVSDTENVSSSKNILSHDPDVGTDTMEKEEKTHHACQEMELKVDQSSESTNPTEAELSSETRQGLQLTSGDVGIDQFLRQGDEPKSVNSDASDPGSVRLEPLTPSEVLEYEATEILHDGDDPSANTSDTVSDQTGGSPGGSNPCRAETAVDLADGEERS", "length": 974 }, "evidence": [ { "id": "I3LEU1", "url": "https://omabrowser.org/oma/group/I3LEU1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "I3LEU1", "url": "https://www.uniprot.org/uniprotkb/I3LEU1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 126, "end_pos": 128, "annotation": "n_glycosylation_sequon" }, { "start_pos": 127, "end_pos": 129, "annotation": "n_glycosylation_sequon" }, { "start_pos": 156, "end_pos": 158, "annotation": "n_glycosylation_sequon" }, { "start_pos": 188, "end_pos": 190, "annotation": "n_glycosylation_sequon" }, { "start_pos": 213, "end_pos": 215, "annotation": "n_glycosylation_sequon" }, { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 221, "end_pos": 223, "annotation": "n_glycosylation_sequon" }, { "start_pos": 272, "end_pos": 274, "annotation": "n_glycosylation_sequon" }, { "start_pos": 343, "end_pos": 345, "annotation": 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"https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 345, "end_pos": 373, "start_aa": "Thr", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 119, "end_pos": 121 }, { "start_pos": 126, "end_pos": 128 }, { "start_pos": 127, "end_pos": 129 }, { "start_pos": 156, "end_pos": 158 }, { "start_pos": 188, "end_pos": 190 }, { "start_pos": 213, "end_pos": 215 }, { "start_pos": 217, "end_pos": 219 }, { "start_pos": 221, "end_pos": 223 }, { "start_pos": 272, "end_pos": 274 }, { "start_pos": 343, "end_pos": 345 }, { "start_pos": 538, "end_pos": 540 }, { "start_pos": 548, "end_pos": 550 }, { "start_pos": 553, "end_pos": 555 }, { "start_pos": 563, "end_pos": 565 }, { "start_pos": 568, "end_pos": 570 }, { "start_pos": 639, "end_pos": 641 }, { "start_pos": 797, "end_pos": 799 }, { "start_pos": 857, "end_pos": 859 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LK71-1", "uniprot_ac": "I3LK71", "uniprot_id": "I3LK71_PIG", "mass": { "chemical_mass": 33741.0, "monoisotopic_mass": 33741.0 }, "refseq": { "ac": "XP_020953889", "name": "heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953889" }, "gene_names": [ { "name": "HNRNPC", "type": "recommended", "evidence": [ { "id": "I3LK71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK71" } ] }, { "name": "HNRNPC", "type": "synonym", "evidence": [ { "id": "XP_020953889", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953889" } ] } ], "protein_names": [ { "name": "Heteroous nuclear ribonucleoprotein C", "type": "synonym", "evidence": [ { "id": "I3LK71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK71/entry#names_and_taxonomy" } ] }, { "name": "heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020953889", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953889" } ] } ], "function": [ { "annotation": "Binds pre-mRNA and nucleates the assembly of 40S hnRNP particles. Interacts with poly-U tracts in the 3'-UTR or 5'-UTR of mRNA and modulates the stability and the level of translation of bound mRNA molecules. Single HNRNPC tetramers bind 230-240 nucleotides. Trimers of HNRNPC tetramers bind 700 nucleotides. May play a role in the early steps of spliceosome assembly and pre-mRNA splicing. N6-methyladenosine (m6A) has been shown to alter the local structure in mRNAs and long non-coding RNAs (lncRNAs) via a mechanism named 'm(6)A-switch', facilitating binding of HNRNPC, leading to regulation of mRNA splicing.", "evidence": [ { "database": "UniProtKB", "id": "I3LK71", "url": "https://www.uniprot.org/uniprotkb/I3LK71#function" }, { "database": "UniProtKB", "id": "ARBA00045185", "url": "https://www.uniprot.org/uniprotkb/ARBA00045185#function" }, { "database": "UniProtKB", "id": "A0A4X1UY66", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UY66#function" }, { "database": "UniProtKB", "id": "A0A8W4FM53", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM53#function" }, { "database": "UniProtKB", "id": "A0A287AA79", "url": "https://www.uniprot.org/uniprotkb/A0A287AA79#function" }, { "database": "UniProtKB", "id": "A0A287AJY0", "url": "https://www.uniprot.org/uniprotkb/A0A287AJY0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], 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"MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQAIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSQKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS", "length": 307, "header": "tr|I3LK71-1|I3LK71_PIG Isoform 1 of Heteroous nuclear ribonucleoprotein C OS=Sus scrofa OX=9823 GN=HNRNPC PE=1 SV=2 CANONICAL=I3LK71-1" }, "isoforms": [ { "isoform_ac": "A0A287AA79-1", "url": "https://www.uniprot.org/uniprotkb/I3LK71/entry#A0A287AA79-1", "sequence": { "sequence": "MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRVKGDDLQAIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSQKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS", "length": 299, "header": "tr|A0A287AA79-1|A0A287AA79_PIG Computationally mapped 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LM79-1", "uniprot_ac": "I3LM79", "uniprot_id": "I3LM79_PIG", "mass": { "chemical_mass": 102197.0, "monoisotopic_mass": 102197.0 }, "refseq": { "ac": "XP_020939701", "name": "dipeptidyl peptidase 9 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939701" }, "gene_names": [ { "name": "DPP9", "type": "recommended", "evidence": [ { "id": "I3LM79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ] }, { "name": "DPP9", "type": "synonym", "evidence": [ { "id": "XP_020939701", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939701" } ] } ], "protein_names": [ { "name": "dipeptidyl-peptidase IV", "type": "recommended", "evidence": [ { "id": "I3LM79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LM79/entry#names_and_taxonomy" } ] }, { "name": "3.4.14.5", "type": "synonym", "evidence": [ { "id": "I3LM79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LM79/entry#names_and_taxonomy" } ] }, { "name": "dipeptidyl peptidase 9 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020939701", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939701" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DPP9", "url": "https://www.uniprot.org/uniprotkb/I3LM79", "locus": { "chromosome": "2", "start_pos": 74179738, "end_pos": 74134743, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026063", "url": "https://www.ensembl.org/id/ENSSSCG00000026063" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026063", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026063", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100621098", "url": "https://www.ncbi.nlm.nih.gov/gene/100621098", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001375", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001375", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002469", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002469", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045785", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045785", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050278", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050278", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621098", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621098", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VTHMTPQ", "url": "https://omabrowser.org/oma/group/VTHMTPQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LM79", "url": "https://www.orthodb.org/?gene=I3LM79", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11731", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11731", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11731:SF109", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11731:SF109", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00326", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00326", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00930", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00930", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19520", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19520", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939701", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939701", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AAC3", "url": "https://www.uniprot.org/uniprotkb/A0A287AAC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAC3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480KNR9", "url": "https://www.uniprot.org/uniprotkb/A0A480KNR9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480KNR9-1", "url": "https://www.uniprot.org/uniprotkb/A0A480KNR9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LM79-1", "url": "https://www.uniprot.org/uniprotkb/I3LM79-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LUL8", "url": "https://www.uniprot.org/uniprotkb/I3LUL8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LUL8-1", "url": "https://www.uniprot.org/uniprotkb/I3LUL8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRKVKKLRLDNANTGRWRSFSLNSEGAERMATGAPTSDRGDRGDTVEMEDPASRFQVQKHSWDELRNIIHGSRKNSGLIVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEEQRLTFCHRGLSSVLDDPKSAGVATFVIQEEFDRFTGYWWCPTASWEGSDGCKTLRILYEEVDESEVEIIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAEFQTDSQGKIVSTQEKELVQPFRTLFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPTTESEEQRAALARAVPRNVQPYVVYEEVTDVWINVHDIFYPFPQPEGEDELCFIRANECKTGFCHLYKVTAVLKPHGYDWTQPFNPGEDEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYETAGEIVRLTTPGFSHSCSMSQNFDMFISHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEVTLLHFLQEYL", "length": 894, "header": "tr|I3LM79-1|I3LM79_PIG Isoform 1 of dipeptidyl-peptidase IV OS=Sus scrofa OX=9823 GN=DPP9 PE=3 SV=2 CANONICAL=I3LM79-1" }, "isoforms": [ { "isoform_ac": "A0A287AAC3-1", "url": "https://www.uniprot.org/uniprotkb/I3LM79/entry#A0A287AAC3-1", "sequence": { "sequence": "MRKVKKLRLDNANTGRWRSFSLNSEGAERMATGAPTSDRGDRGDTVEMEDPASRFQVQKHSWDELRNIIHGSRKNSGLIVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEEQRLTFCHRGLSSVLDDPKSAGVATFVIQEEFDRFTGYWWCPTASWEGSKNPKIALKLAEFQTDSQGKIVSTQEKELVQPFRTLFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPTTESEEQRAALARAVPRNVQPYVVYEEVTDVWINVHDIFYPFPQPEGEDELCFIRANECKTGFCHLYKVTAVLKPHGYDWTQPFNPGEDEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYETAGEIVRLTTPGFSHSCSMSQNFDMFISHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEVTLLHFLQEYL", "length": 851, "header": "tr|A0A287AAC3-1|A0A287AAC3_PIG Computationally mapped isoform of dipeptidyl-peptidase IV OS=Sus scrofa OX=9823 GN=DPP9 PE=3 SV=1 CANONICAL=I3LM79-1" }, "locus": { "chromosome": "2", "start_pos": 74178742, "end_pos": 74138558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038818.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038818.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040762.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040762.1" } ] } }, { "isoform_ac": "A0A480KNR9-1", "url": "https://www.uniprot.org/uniprotkb/I3LM79/entry#A0A480KNR9-1", "sequence": { "sequence": "MRKVKKLRLDNANTGRWRSFSLNSEGAERMATGAPTSDRGDRGDTVEMEDPASRFQVQKHSWDELRNIIHGSRKNSGLIVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEEQRLTFCHRGLSSVLDDPKSAGVATFVIQEEFDRFTGYWWCPTASWEGSDGCKTLRILYEEVDESEVEIIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAEFQTDSQGKIVSTQEKELVQPFRTLFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPTTESEEQRAALARAVPRNVQPYVVYEEVTDVWINVHDIFYPFPQPEGEDELCFIRANECKTGFCHLYKVTAVLKPHGYDWTQPFNPGEDEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYETAGEIVRLTTPGFSHSCSMSQNFDMFISHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKQPHGAEPPSSLPATADPRMASGCTKPRQQLSVGG", "length": 813, "header": "tr|A0A480KNR9-1|A0A480KNR9_PIG Computationally mapped isoform of dipeptidyl-peptidase IV OS=Sus scrofa OX=9823 GN=DPP9 PE=3 SV=1 CANONICAL=I3LM79-1" }, "locus": { "chromosome": "2", "start_pos": 74173952, "end_pos": 74138558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054763.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054763.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059462.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059462.1" } ] } }, { "isoform_ac": "I3LM79-1", "url": "https://www.uniprot.org/uniprotkb/I3LM79/entry#I3LM79-1", "sequence": { "sequence": "MRKVKKLRLDNANTGRWRSFSLNSEGAERMATGAPTSDRGDRGDTVEMEDPASRFQVQKHSWDELRNIIHGSRKNSGLIVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEEQRLTFCHRGLSSVLDDPKSAGVATFVIQEEFDRFTGYWWCPTASWEGSDGCKTLRILYEEVDESEVEIIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAEFQTDSQGKIVSTQEKELVQPFRTLFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPTTESEEQRAALARAVPRNVQPYVVYEEVTDVWINVHDIFYPFPQPEGEDELCFIRANECKTGFCHLYKVTAVLKPHGYDWTQPFNPGEDEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYETAGEIVRLTTPGFSHSCSMSQNFDMFISHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEVTLLHFLQEYL", "length": 894, "header": "tr|I3LM79-1|I3LM79_PIG Isoform 1 of dipeptidyl-peptidase IV OS=Sus scrofa OX=9823 GN=DPP9 PE=3 SV=2 CANONICAL=I3LM79-1" }, "locus": { "chromosome": "2", "start_pos": 74178742, "end_pos": 74138558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030752.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030752.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025200.2", "url": "https://www.ensembl.org/id/ENSSSCP00000025200.2" } ] } }, { "isoform_ac": "I3LUL8-1", "url": "https://www.uniprot.org/uniprotkb/I3LM79/entry#I3LUL8-1", "sequence": { "sequence": "MTQQIFNFSLNSEGAERMATGAPTSDRGDRGDTVEMEDPASRFQVQKHSWDELRNIIHGSRKNSGLIVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEEQRLTFCHRGLSSVLDDPKSAGVATFVIQEEFDRFTGYWWCPTASWEGSDGCKTLRILYEEVDESEVEIIHVPSPALEERKTDSYRYPRTGEGPGQMRVAEWWSEIVSTQEKELVQPFRTLFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPTTESEEQRAALARAVPRNVQPYVVYEEVTDVWINVHDIFYPFPQPEGEDELCFIRANECKTGFCHLYKVTAVLKPHGYDWTQPFNPGEDEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYETAGEIVRLTTPGFSHSCSMSQNFDMFISHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGYEAGSVALHVEKLPNDCDATVARVGVASAPASLPAPCVSSRCPPSSLQCGHFHFHLHTFQFTGTITSETIKTDRH", "length": 868, "header": "tr|I3LUL8-1|I3LM79_PIG Computationally mapped isoform of dipeptidyl-peptidase IV OS=Sus scrofa OX=9823 GN=DPP9 PE=3 SV=3 CANONICAL=I3LM79-1" }, "locus": { "chromosome": "2", "start_pos": 74175237, "end_pos": 74141726, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026491.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026491.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027818.3", "url": "https://www.ensembl.org/id/ENSSSCP00000027818.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LUL8", "url": "https://www.uniprot.org/uniprotkb/I3LUL8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621098", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621098", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A2R8QP51-1", "protein_name": "Dipeptidyl peptidase 9", "gene_name": "dpp9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MYRGKRVKLEDETEGSWKSFAAVRMTAVDDISDSTEVVEMEDVPSQFFVEKHSWDGLRDIIHNSRMYSGMVINKAPHDFQFVQKHDESGPHSHRLYYLGMPYGSRENSLLYSEIPKKIRKEALLVLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDYHAQSGLFLFQASNSLFYCRDGGHNGFIQAAPMKPMEIKTQCSGIRMDPKISPGDPSFIAFINNNDLWVTNIETAEERRLTFCHKGLNNVKEDPKSAGVATFVIQEEFDRFTGYWWSPAATEDADGGKTLQLLYEEVDESEVEIIHVPSPALEERKADVYRYPRTGSKNPQISLKLAEIRTDQQGKMISAQNKELVLPFTTLFPGVEYIARAGWTKDGKFAWAVLLDRSQQKLQLVLLPPALFIPVSVDDPQWEEHVEAMPEGVQPFIIYEEITDIWINVHDIFYPFIQTSNDKISFLWVNESQTGFCHLYRITSLLKPGCHQWSREYSPSEDDFKCSTEEEVALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYESPGEIVRLTKPGFSHSCSVSQNFDMFISHYSNVSTPPCVHVYKLTGADSDPLHKEPEFWASMMEATGCRPDYIPPEIFSFPASSGFRLYGMLYKPHNLKPGKKHPTILFVYGGPQVQLVNNSYKGVKYLRLNTLASLGYAVVVIDGRGSCQRGLKFEGALKNKMGQVEIEDQVEGLQFVAEKYKFIDLSRVAIHGWSYGGFLSLMGLIHRPNIFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQQGYEAGSVALHVDKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEIMLLYFLQQHL", "length": 885 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A3Q2U8J3-1", "protein_name": "dipeptidyl-peptidase IV", "gene_name": "DPP9", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQKIKRVRLENETAGSWRSFLSSSEEETMTAVDTLSDSSEVVEMEDVPSEFQVQKHSWDGLRDIIHSSRKYSGMIVNKAPHDFQFVRKTEESSPHSHRLYYLGMPYGSRENSLLYSEIPKKVRKEALLLLSWKQMLDHFQATPHHGMYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCTGPRMDPKICPADPAFFSFINNNDLWVANIETGEEKRMTYCHKGLSNVLDDPKSAGVATFVIQEEFDRFTGYWWCPTSSTEGPENLKTLRILYEEVDESEVEIIHVPSPALEERKTDSYRYPRTGSKNPKITLKLAEFKADSKGKIVCAQDKELVQPFAALFPTVEYIARAGWTRDGKYAWAMFLDRPQQRLQLILLPPALFIPVPENEEQRAEFAKIVPENVQPFVIYEEITDVWINVHDIFYPFIQPEGEEEELCFIRANECKTGFCHLYRVTVVLKQGSYDWVQPYVHSEDDFKCLIKEEVALTGGEWEVLARHGSKGSTCLPGQWGWILLPCTVCSSLQTMLARKSTWASAFGNCKIWVNEATKLVYFQGTKDTPLEHHLYVVSYESPGEIVRLTIPGFSHSCSMSQNFDMFISHYSSVSTPPCVHVYKLSGSDDDPLHKQPKFWASMMEAASCPPDYVPPEIFHFRTQSDVELYGMVYKPHDVQPGKKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLYYVAEKYGFIDLSRVAIHGWSYGGFLSLMGLICKPNVFKIAIAGAPVTVWMAYDTGYTERYMDIPENNQQGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEITLLHFLQEYL", "length": 931 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8I6GBE0-1", "protein_name": "dipeptidyl-peptidase IV", "gene_name": "Dpp9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLGSALTLSNQKPPLPGQRRRSCRVPGVRRLRCPPAPATSGPSSWAWSVACEAPPALGTPCPACPPRRARVRTPRLQLPWKLLGPFRSFSPPSQEPQRMSGGVSPVEQVAAGDMDDTAARFCVQKHSWDGLRNIIHGSRKSSGLIVSKAPHDFQFVQKPDESGPHSHRLYYLGMPYGSRENSLLYSEIPKKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNNDLWVANIETGEERRLTFCHQGSASVLDNPKSAGVATFVIQEEFDRFTGCWWCPTASWEGSGGLKTLRILYEEVDESEVEVIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAELQTDHQGKIVSSCEKELVQPFSSLFPKVEYIARAGWTRDGRYAWAMFLDRPQQRLQLVLLPPALFIPTLESEAQWQEAARAIPKNVQPFIIYEEVTNVWINVHDIFHPFPQAEGQQDFCFLRANECKTGFCHLYRVTVDLKTNDYDWTEPLSPAEDEFKCPIKEEVALTSGEWEVLSRHGSKIWVNEQTKLVYFQGTKDTPLEHHLYVVSYESAGEIVRLTTPGFSHSCSMSQNFDMFVSHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRADVQLYGMIYKPHTLQPGRKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLHFEGALKNQMGQVEIEDQVEGLQYVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQQGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCRESGEHYEVTLLHFLQEHL", "length": 961 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7FZ63-1", "protein_name": "dipeptidyl-peptidase IV", "gene_name": "Dpp9", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLIPSQSQFITSVSPLLPVITLNPQSSASDFNPCIISPTLRVQALGPSQPLPIHSIVQPPTQAPLGAPWAITNLLSRSWDWCPGGVEYSRQFPAGSWGDRALRDTSLPSAAQGMLAAPRGWEAQLESNQVDRVRPHRRRLPPAWKVRAPRLQLPWKLLGPFRSFSLPSQESQRMSSGVSPTEQVAAGDMDDTAARFCVQKHSWDGLRNIIHGSRKSSGLIISKAPHDFQFVQKPDESGPHSHRLYYLGMPYGSRENSLLYSEIPKKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEERRLTFCHQGSANVLDDPKSAGVATFVIQEEFDRFTGCWWCPTASWEGSEGLKTLRILYEEVDESEVEVIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAEIQTDTQGKIVSSCEKELVQPFSSLFPKVEYIARAGWTRDGRYAWAMFLDRPQQRLQLVLLPPALFIPSPENEAQRQAAARAVPKNVQPFVIYEEVTNVWINVHDIFHPFPQAEGQQDFSFLRANECKTGFCHLYKVTVELKTSDYDWTEPLSPTEDEFKCPIKEEVALTSGEWEVLSRHGSKIWVNEQTKLVYFQGTKDTPLEHHLYVVSYESAGEIVRLTTPGFSHSCSMSQNFDMFVSHYSSVSTPPCVHVYKLSGSDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRADVQLYGMIYKPHTLQPGRKHPTVLFVYGGPQVQLVTNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQYVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQQGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEVTLLHFLQEHL", "length": 1037 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9TGY1-1", "protein_name": "dipeptidyl-peptidase IV", "gene_name": "DPP9", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRKVKKLRLDNVNTGHWRSFSLNSQGAERMATGALTSERGDAAETEDPASRFQVQKHSWEGLRSIIHGSRKNSGLVVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEERRLTFCHKGLSSVLDDPKSAGVATFVIQEEFDRFTGYWWCPTASWEGSEGCKTLRILYEEVDESEVEIIHVPSPALEERKTDSYRYPRTGSKNPRIALKLAEFQTDSQGKIVSTQEKELVQPFSLLFPKVEYLARAGWTQDGKYAWAMFLDRPQQRLQLVLLPPALFIPTTDNEEQRAAFARAVPRDVQPYVVYEEVTDVWINVHDIFYPFPQAEGVDELCFIRANECKTGFCHLYKVTAVLRPRGYDWTQPFSPGDDEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYEVAGEIVRLTTPGFSHSCSMSQNFDMFISHYSSVGTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGRKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEVTLLHFLQEHL", "length": 891 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54U01-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MESKKYKIEGRDELLDKEEILKLLGEESGSSAPYSFEFNDSKNHLYFLSNVKDQKNIKNIHYIDMNSDSKEIKPLFNYVDKDVELSIEDQLQRERMRTAANGITQFTFDQKHQFIIAPINNKINKIDIKESITKPIIKEIVGETYNHQISADGKIVSFLKDKDIWITDISTNAMYRITFSNDEKHHKFRYAGDIGFIYAEEFSRYTGYWWSPIVGTCVKTGKPMYTICYLEEDETNVMDYHIPTSDLRGKTTQYKYPLAGEKNSICKVCLVSFVLPTRTTFQDSKIEIVKSELFDLKTQFPWAEYITRAGWTPNGHSIYLQLLDRKQQHLALVMVPLHVFAEDYSSSSSSSVKSIPKLPVLIEETTSVWINIEFSFQFLKSIENQLIWSNEQSGYRHLYLIKWDKNFTNIQSTPITLSTCNDNDNDNNNWMVSSDDIHIDEKRKLVYFTGTKDTCLEQHLYVTRFDKPNSEIKRLSHANFSHRSISISSNFKKFITTYSNISTISKTEVFDLIYNDDNNDNNDIYPIVKSSFFINDDDDDDDNDKKKININIPKIFNFKNSKGVTIYGQYTLPSDYSKDKKYPTVVYVYGGPHVQIVRNQYNYIKQHYTNFGFIQVMIDNVGSANRGLEFESHIREKMGQVEIGDQVEGINYLVGNDIVSIDVNRIAISGWSYGGYNSLMAISQRPDVFKIAVCGAPVSDWRLYNTGYTERYMNVPQDNIDGYKLGDTTHYSFPTEENRLLLIHGLQDENVHFSNTIYIIDHLTKTQKPYILKTLPNERHGVRNTDNRIYIGLFVINHLLKNL", "length": 803 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86TI2-1", "protein_name": "Dipeptidyl peptidase 9", "gene_name": "DPP9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATTGTPTADRGDAAATDDPAARFQVQKHSWDGLRSIIHGSRKYSGLIVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIPKKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEERRLTFCHQGLSNVLDDPKSAGVATFVIQEEFDRFTGYWWCPTASWEGSEGLKTLRILYEEVDESEVEVIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAEFQTDSQGKIVSTQEKELVQPFSSLFPKVEYIARAGWTRDGKYAWAMFLDRPQQWLQLVLLPPALFIPSTENEEQRLASARAVPRNVQPYVVYEEVTNVWINVHDIFYPFPQSEGEDELCFLRANECKTGFCHLYKVTAVLKSQGYDWSEPFSPGEDEFKCPIKEEIALTSGEWEVLARHGSKIWVNEETKLVYFQGTKDTPLEHHLYVVSYEAAGEIVRLTTPGFSHSCSMSQNFDMFVSHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHALQPGKKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQHGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCPESGEHYEVTLLHFLQEYL", "length": 863 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BVG4-1", "protein_name": "Dipeptidyl peptidase 9", "gene_name": "Dpp9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCSGVSPVEQVAAGDMDDTAARFCVQKHSWDGLRSIIHGSRKSSGLIVSKAPHDFQFVQKPDESGPHSHRLYYLGMPYGSRENSLLYSEIPKKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVANIETGEERRLTFCHQGSAGVLDNPKSAGVATFVIQEEFDRFTGCWWCPTASWEGSEGLKTLRILYEEVDESEVEVIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAELQTDHQGKIVSSCEKELVQPFSSLFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPAVESEAQRQAAARAVPKNVQPFVIYEEVTNVWINVHDIFHPFPQAEGQQDFCFLRANECKTGFCHLYRVTVELKTKDYDWTEPLSPTEDEFKCPIKEEVALTSGEWEVLSRHGSKIWVNEQTKLVYFQGTKDTPLEHHLYVVSYESAGEIVRLTTLGFSHSCSMSQSFDMFVSHYSSVSTPPCVHVYKLSGPDDDPLHKQPRFWASMMEAANCPPDYVPPEIFHFHTRADVQLYGMIYKPHTLQPGRKHPTVLFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLHFEGALKNQMGQVEIEDQVEGLQYVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQQGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERHSIRCRESGEHYEVTLLHFLQEHL", "length": 862 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FNF6-1", "protein_name": "Prolyl oligopeptidase family protein", "gene_name": "MOP9.8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADKDVPFGVEDIVQTPLPGYVAPTAVSFSPDDSLITYLFSPEKNLKRRVYAFDVNKGESNLVFSPPDGGVDESNISPEEKLRRERLRERGLGVTRYEWVKTNSKMRFIVVPLPAGVYMKDLSSSPNPELIVPSSPTSPIIDPRLSPNGLFLAYVRESELHVLNLLKNQTQQLTSGANGSTLSHGLAEYIAQEEMDRRNGYWWSLDSKFIAYTEVDSSQIPLFRIMHQGKRSVGSEAQEDHAYPFAGALNSTLRLGVVSSAGGGKTTWMNLVCGGRGNTEDEYLGRVNWLPGNVLIVQVLNRSQSKLKIISFDINTGQGNVLLTEESDTWVTLHDCFTPLEKVPSSRGSGGFIWASERTGFRHLYLYESDGTCLGAITSGEWMVEQIAGVNEPMSLVYFTGTLDGPLETNLYCAKLEAGNTSRCQPMRLTHGKGKHIVVLDHQMKNFVDIHDSVDSPPRVSLCSLSDGTVLKILYEQTSPIQILKSLKLEPPEFVQIQANDGKTTLYGAVYKPDSSKFGPPPYKTMINVYGGPSVQLVYDSWINTVDMRTQYLRSRGILVWKLDNRGTARRGLKFESWMKHNCGYVDAEDQVTGAKWLIEQGLAKPDHIGVYGWSYGGYLSATLLTRYPEIFNCAVSGAPVTSWDGYDSFYTEKYMGLPTEEERYLKSSVMHHVGNLTDKQKLMLVHGMIDENVHFRHTARLVNALVEAGKRYELLIFPDERHMPRKKKDRIYMEQRIWEFIEKNL", "length": 746 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VC19-1", "protein_name": "Dipeptidyl peptidase 9", "gene_name": "Dmel\\CG3744", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MESRTQMNQSNQQQQQQRNRLPSSPSPPLSVVSLTGGPNANTTLMGLEHDAVPSSQLGRNNNNGGGHHRSHSITNAATTSLANLLDGFTARVSTAVSVAGGTNMLMDRSSQSAASTPGSTHSIASLTSMGSLGTTANALYSSIGSALNSITSPIQAAAAAATATTTEVVVAAASVITNHLSSPTSGTPPHGLDVDEGDDECDDCEEDEDDPVDNDGHIAAPTPNKSWAENKQVVQEIRKKMCNLSSMVPTNVQFRHLSDGRARCYFLGTPPQSWETTLLFADINLTQSEEQQLLVQRLEGIASDEWSPTMNAGSPTSSGHQPAFLFNSLPRPRLPWSPLLQQPIQSSGGSGGSGSASPYAREYQLLQERKRLSTWGITSYELHKPSGKLVFPCFNDLYQCLDTGYNSGLLFPTQLRTCPQWTALDPQICPQNSDMIAYISDCDLFVTHTLSGHEKRLTYTSTGRHSYVDDALSAGVPSYVMQEEFSRYQGFWWQPHSNDGIYRIVYEEVDESEVSVYTFPSSTAMHGRVDEYRFPRTGSPNAKSKLKLVQFVLNEALQVSEIAIKDLPYSLLAVFSWLEYIVRVGWTPDAKYVWVQGLDRKQQRLDVILIPLDNFCESYSSQVSTPTDSIGDHSWRSLYSRTITPLQVIYTERSDSWINVHDMLHFLDLTETSVTFLWASEETGFRHLYLVTASLLLSQANGQPDPGSVGAQPSFVDLSALQPRILNKVALTSGEWEVLARNLWVDKANKLVYFVGLRDTPLEKHLYVVSLERPEHIRLLTEPGYSYLVEFDDQCKLMLLVYCNIQRLPSCKVMRVNQTCSNGGVNGIQISLVGYLHEGGKPEPQYCPQIFSPQLPSGDIVYAMVFKPHNFELGVKYPTVLNVYGGPEVQTVNNTFKGKHQLRMHMLAAQGYCVICIDSRGSRHRGKRFESHIRGRMGQVELTDQVDALRSLSDQLGYIDMDRVAIHGWSYGGYLSLMGLVQYPKIFKVAIAGAPVTNWEYYDTGYTERYMDMPQNNEAGYSAGSVLEYVNSFPEEDKRLLLIHGLIDENVHFCHTSRLISALNKANKPYEVHLFPEERHSLRNLESNKNYETKLLSFLQNL", "length": 1102 }, "evidence": [ { "id": "I3LM79", "url": "https://omabrowser.org/oma/group/I3LM79/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "dipeptidyl-peptidase activity", "id": "GO:0008239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008239", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" }, { "name": "serine-type peptidase activity", "id": "GO:0008236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008236", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" }, { "name": "negative regulation of programmed cell death", "id": "GO:0043069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043069", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" }, { "name": "cell leading edge", "id": "GO:0031252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031252", "evidence": [ { "database": "UniProtKB", "id": "I3LM79", "url": "https://www.uniprot.org/uniprotkb/I3LM79" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 236, "end_pos": 238, "annotation": "n_glycosylation_sequon" }, { "start_pos": 684, "end_pos": 686, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LM79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LM79" }, { "id": "PF19520", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19520" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Dipeptidyl peptidase 8 /9 ,N-terminal", "eco_id": "ECO_0000259", "start_pos": 36, "end_pos": 166, "start_aa": "Thr", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LM79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LM79" }, { "id": "PF00930", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00930" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Dipeptidylpeptidase IV N-terminal", "eco_id": "ECO_0000259", "start_pos": 177, "end_pos": 601, "start_aa": "Ser", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LM79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LM79" }, { "id": "PF00326", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00326" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase S9 prolyl oligopeptidase catalytic", "eco_id": "ECO_0000259", "start_pos": 694, "end_pos": 894, "start_aa": "Arg", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 236, "end_pos": 238 }, { "start_pos": 684, "end_pos": 686 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LCC0-1", "uniprot_ac": "I3LCC0", "uniprot_id": "I3LCC0_PIG", "mass": { "chemical_mass": 126879.0, "monoisotopic_mass": 126879.0 }, "refseq": {}, "gene_names": [ { "name": "ARHGAP45", "type": "recommended", "evidence": [ { "id": "I3LCC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCC0" } ] } ], "protein_names": [ { "name": "Rho GTPase-activating protein 45", "type": "recommended", "evidence": [ { "id": "I3LCC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCC0/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Contains a GTPase activator for the Rho-type GTPases (RhoGAP) domain that would be able to negatively regulate the actin cytoskeleton as well as cell spreading. However, also contains N-terminally a BAR-domin which is able to play an autoinhibitory effect on this RhoGAP activity.", "evidence": [ { "database": "UniProtKB", "id": "I3LCC0", "url": "https://www.uniprot.org/uniprotkb/I3LCC0#function" }, { "database": "UniProtKB", "id": "ARBA00057562", "url": "https://www.uniprot.org/uniprotkb/ARBA00057562#function" }, { "database": "UniProtKB", "id": "A0A287AAS6", "url": "https://www.uniprot.org/uniprotkb/A0A287AAS6#function" }, { "database": "UniProtKB", "id": "A0A481BYF2", "url": "https://www.uniprot.org/uniprotkb/A0A481BYF2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCC0", "url": "https://www.uniprot.org/uniprotkb/I3LCC0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ARHGAP45", "url": "https://www.uniprot.org/uniprotkb/I3LCC0", "locus": { "chromosome": "2", "start_pos": 77342156, "end_pos": 77356837, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027565", "url": "https://www.ensembl.org/id/ENSSSCG00000027565" } ] } } ], "crossref": [ { "id": "I3LCC0", "url": "https://alphafold.ebi.ac.uk/entry/I3LCC0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027565", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027565", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20816", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20816", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623239", "url": "https://www.ncbi.nlm.nih.gov/gene/100623239", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027267", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027267", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031160", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031160", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051025", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051025", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054713", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054713", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15228", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15228", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15228:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15228:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00620", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00620", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22699", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22699", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24235", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24235", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6798695", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8980692", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AAS6", "url": "https://www.uniprot.org/uniprotkb/A0A287AAS6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAS6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAS6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A481BYF2", "url": "https://www.uniprot.org/uniprotkb/A0A481BYF2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A481BYF2-1", "url": "https://www.uniprot.org/uniprotkb/A0A481BYF2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCC0", "url": "https://www.uniprot.org/uniprotkb/I3LCC0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCC0-1", "url": "https://www.uniprot.org/uniprotkb/I3LCC0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGGQRILKGLLGWVCGWTWAWRARFGMRGCGLHALCPGDRPLPLEELTRRDGADTVSLGPSLEPPSVASNAKATGTLKRPTSLSRHASAAGFPLSGASTWTLGRGHRSPLTTASPAEVPNQGPCPDTVEDISHLLADVARFAEGLEKLKECVLHDDLLEARRPLAHERLGEALRVMRQVISKYPLLNTLETLTAAGTLIAKIKAFHYESNNESDKQEFEKALETIAVSFSSTVSEFLMGEVDSSILLSVPPGDPGQSMENLYGQGSEGAPTSTEDCDVGCLPPEEVDMLLQRCEGGVDAALQYAKNMAKYMKDLIGYLEKRTALEMDFAKGLQKIVHNSRQSVTQEPHMPLLSIYLLALEQDLEFGHGMVQAVGTLQTQTFMQPLNLRRLEHEKRRKEIKESWHRAQRKLQEAESNLRKAKQGYVQRCEDHDKARFLVAKAEEEQAGTGPGAGGAASKTLDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQELEDTKVTALRQIQEVIRQSDQTIKSATISYYQMMHMQTAPLPVHFQMLCESSKLYDPGQQYASHVRQLQRGEEPDVHYDFEPHVSTNAWSPVMRARKGSFNVGDNAGAEAAGTPPEEGGPSDGALAKDRRGGRGHQVHKSWPISISDSEASLDPSPGSGDFKKFERMSSSGTMSSSEELADQEGSAGASAFDQTDLNGMAPELPVAVPSGPFRHVGLSKAARTHRLRKLRTPAKCRECNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSQAARSTPDGVPFIVKKCIFEIEQRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRVDVTEREASAVAMAGRLRELLQDLPLENRATLQYLVRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQACIVETLITHYSLVFEEEPEEVPGGQEGTSSQQAEVVVQVPYLEASGGAAFPLQEEAEDGPLEPHIASNDSDSELEEAPELPSPAGGGALHRLSFLEKQGSEASAESSRDSRSGSEEQLGAVTGEDGDGLWESLGEDPAQRLSEYNTNQCNNVAPVRLPAMRLRAGRLPTGSGWERQPEFV", "length": 1156, "header": "tr|I3LCC0-1|I3LCC0_PIG Isoform 1 of Rho GTPase-activating protein 45 OS=Sus scrofa OX=9823 GN=ARHGAP45 PE=4 SV=3 CANONICAL=I3LCC0-1" }, "isoforms": [ { "isoform_ac": "A0A287AAS6-1", "url": "https://www.uniprot.org/uniprotkb/I3LCC0/entry#A0A287AAS6-1", "sequence": { "sequence": "MLGQQQRARASYSPHRAGQQGPRRMGRDPSVQLTELTRRDGADTVSLGPSLEPPSVASNAKATGTLKRPTSLSRHASAAGFPLSGASTWTLGRGHRSPLTTASPAEVPNQGPCPDTVEDISHLLADVARFAEGLEKLKECVLHDDLLEARRPLAHERLGEALRVMRQVISKYPLLNTLETLTAAGTLIAKIKAFHYESNNESDKQEFEKALETIAVSFSSTVSEFLMGEVDSSILLSVPPGDPGQSMENLYGQGSEGAPTSTEDCDVGCLPPEEVDMLLQRCEGGVDAALQYAKNMAKYMKDLIGYLEKRTALEMDFAKGLQKIVHNSRQSVTQEPHMPLLSIYLLALEQDLEFGHGMVQAVGTLQTQTFMQPLNLRRLEHEKRRKEIKESWHRAQRKLQEAESNLRKAKQGYVQRCEDHDKARFLVAKAEEEQAGTGPGAGGAASKTLDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQELEDTKVTALRQIQEVIRQSDQTIKSATISYYQMMHMQTAPLPVHFQMLCESSKLYDPGQQYASHVRQLQRGEEPDVHYDFEPHVSTNAWSPVMRARKGSFNVGDNAGAEAAGTPPEEGGPSDGALAKDRRGGRGHQVHKSWPISISDSEASLDPSPGSGDFKKFERMSSSGTMSSSEELADQEGSAGASAFDQTDLNGMAPELPVAVPSGPFRHVGLSKAARTHRLRKLRTPAKCRECNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSQAARSTPDGVPFIVKKCIFEIEQRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRVDVTEREASAVAMAGRLRELLQDLPLENRATLQYLVRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQACIVETLITHYSLVFEEEPEEVPGGQEGTSSQQAEVVVQVPYLEASGGAAFPLQEEAEDGPLEPHIASNDSDSELEEAPELPSPAGGGALHRLSFLEKQGSEASAESSRDSRSGSEEQLGAVTGEDGDGLWESLGEDPAQRLSEYNTNQCNNVAPVRLPAMRLRAGRLPTGSGWERQPEFV", "length": 1144, "header": "tr|A0A287AAS6-1|A0A287AAS6_PIG Computationally mapped isoform of Rho GTPase-activating protein 45 OS=Sus scrofa OX=9823 GN=ARHGAP45 PE=4 SV=2 CANONICAL=I3LCC0-1" }, "locus": { "chromosome": "2", "start_pos": 77355387, "end_pos": 77342653, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043837.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043837.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041057.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041057.2" } ] } }, { "isoform_ac": "A0A481BYF2-1", "url": "https://www.uniprot.org/uniprotkb/I3LCC0/entry#A0A481BYF2-1", "sequence": { "sequence": "MCICGTVHPGLDQGPVRCQARPLDLLEARRPLAHERLGEALRVMRQVISKYPLLNTLETLTAAGTLIAKIKAFHYESNNESDKQEFEKALETIAVSFSSTVSEFLMGEVDSSILLSVPPGDPGQSMENLYGQGSEGAPTSTEDCDVGCLPPEEVDMLLQRCEGGVDAALQYAKNMAKYMKDLIGYLEKRTALEMDFAKGLQKIVHNSRQSVTQEPHMPLLSIYLLALEQDLEFGHGMVQAVGTLQTQTFMQPLNLRRLEHEKRRKEIKESWHRAQRKLQEAESNLRKAKQGYVQRCEDHDKARFLVAKAEEEQAGTGPGAGGAASKTLDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQELEDTKVTALRQIQEVIRQSDQTIKSATISYYQMMHMQTAPLPVHFQMLCESSKLYDPGQQYASHVRQLQRGEEPDVHYDFEPHVSTNAWSPVMRARKGSFNVGDNAGAEAAGTPPEEGGPSDGALAKDRRGGRGHQVHKSWPISISDSEASLDPSPGSGDFKKFERMSSSGTMSSSEELADQEGSAGASAFDQTDLNGMAPELPVAVPSGPFRHVGLSKAARTHRLRKLRTPAKCRECNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSQAARSTPDGVPFIVKKCIFEIEQRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRVDVTEREASAVAMAGRLRELLQDLPLENRATLQYLVRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQACIVETLITHYSLVFEEEPEEVPGGQEGTSSQQAEVVVQVPYLEASGGAAFPLQEEAEDGPLEPHIASNDSDSELEEAPELPSPAGGGALHRLSFLEKQGSEASAESSRDSRSGSEEQLGAVTGEDGDGLWESLGEDPAQRLSEYNTNQCNNVAPVRLPAMRLRAGRLPTGSGWERQPEFV", "length": 1023, "header": "tr|A0A481BYF2-1|A0A481BYF2_PIG Computationally mapped isoform of Rho GTPase-activating protein 45 OS=Sus scrofa OX=9823 GN=ARHGAP45 PE=4 SV=1 CANONICAL=I3LCC0-1" }, "locus": { "chromosome": "2", "start_pos": 77352775, "end_pos": 77342653, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074153.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074153.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069458.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069458.1" } ] } }, { "isoform_ac": "I3LCC0-1", "url": "https://www.uniprot.org/uniprotkb/I3LCC0/entry#I3LCC0-1", "sequence": { "sequence": "MSGGQRILKGLLGWVCGWTWAWRARFGMRGCGLHALCPGDRPLPLEELTRRDGADTVSLGPSLEPPSVASNAKATGTLKRPTSLSRHASAAGFPLSGASTWTLGRGHRSPLTTASPAEVPNQGPCPDTVEDISHLLADVARFAEGLEKLKECVLHDDLLEARRPLAHERLGEALRVMRQVISKYPLLNTLETLTAAGTLIAKIKAFHYESNNESDKQEFEKALETIAVSFSSTVSEFLMGEVDSSILLSVPPGDPGQSMENLYGQGSEGAPTSTEDCDVGCLPPEEVDMLLQRCEGGVDAALQYAKNMAKYMKDLIGYLEKRTALEMDFAKGLQKIVHNSRQSVTQEPHMPLLSIYLLALEQDLEFGHGMVQAVGTLQTQTFMQPLNLRRLEHEKRRKEIKESWHRAQRKLQEAESNLRKAKQGYVQRCEDHDKARFLVAKAEEEQAGTGPGAGGAASKTLDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQELEDTKVTALRQIQEVIRQSDQTIKSATISYYQMMHMQTAPLPVHFQMLCESSKLYDPGQQYASHVRQLQRGEEPDVHYDFEPHVSTNAWSPVMRARKGSFNVGDNAGAEAAGTPPEEGGPSDGALAKDRRGGRGHQVHKSWPISISDSEASLDPSPGSGDFKKFERMSSSGTMSSSEELADQEGSAGASAFDQTDLNGMAPELPVAVPSGPFRHVGLSKAARTHRLRKLRTPAKCRECNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSQAARSTPDGVPFIVKKCIFEIEQRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRVDVTEREASAVAMAGRLRELLQDLPLENRATLQYLVRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQACIVETLITHYSLVFEEEPEEVPGGQEGTSSQQAEVVVQVPYLEASGGAAFPLQEEAEDGPLEPHIASNDSDSELEEAPELPSPAGGGALHRLSFLEKQGSEASAESSRDSRSGSEEQLGAVTGEDGDGLWESLGEDPAQRLSEYNTNQCNNVAPVRLPAMRLRAGRLPTGSGWERQPEFV", "length": 1156, "header": "tr|I3LCC0-1|I3LCC0_PIG Isoform 1 of Rho GTPase-activating protein 45 OS=Sus scrofa OX=9823 GN=ARHGAP45 PE=4 SV=3 CANONICAL=I3LCC0-1" }, "locus": { "chromosome": "2", "start_pos": 77356728, "end_pos": 77342653, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031323.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031323.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021695.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021695.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCC0", "url": "https://www.uniprot.org/uniprotkb/I3LCC0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" 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"MKTSRRGRALLAVALNLLALLFATTAFLTTHWCQGTQRVPKPGCGQGGRANCPNSGANATANGTAAPAAAAAAAAAAAAGNGPPGGALYSWETGDDRFLFRNFHTGIWYSCEEELGGLGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELFHSSNVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTKTVVEFRHKRKVFEQGYREEPTFIDPEAIKYFRERMEKGDGNEEEDLRLDCRHERYPARHQPHTGDSWPRSSAQEALELNRQCWVLGHWV", "length": 334, "header": "tr|I3LBP4-1|I3LBP4_PIG Isoform 1 of Germ cell-specific gene 1-like protein OS=Sus scrofa OX=9823 GN=GSG1L PE=3 SV=2 CANONICAL=I3LBP4-1" }, "locus": { "chromosome": "3", "start_pos": 19142059, "end_pos": 18904469, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026157.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026157.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021465.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021465.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625929", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625929", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3Z7H4-1", "protein_name": "Germ cell-specific gene 1-like protein", "gene_name": "Gsg1l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTSRRGRALLAVALNLLALLFATTAFLTTYWCQGTQRVPKPGCGQGGGANCPNSGANATANSTAAPVAASPAGAPYSWEAGDERFQLRRFHTGIWYSCEEELGGPGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELVHSSSVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTKTVIEFRHKRKVFEQGYREEPTFIDPEAIKYFRERIEKGDVSEEEDFRLACRHERYPTRHQPHMGDSWPRSSAHEAAELNRQCWVLGHWV", "length": 322 }, "evidence": [ { "id": "I3LBP4", "url": "https://omabrowser.org/oma/group/I3LBP4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3ZK93-1", "protein_name": "Germ cell-specific gene 1-like protein", "gene_name": "Gsg1l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTSRRGRALLAVALNLLALLFATTAFLTTYWCQGTQRVPKPGCGQGGGANCPNSGANATANSTAAPVAASPAGAPYSWEAGDERFQLRRFHTGIWYSCEEELGGPGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSSSVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTKTVIEFRHKRKVFEQGYREEPTFIDPEAIKYFRERIEKGDVSEEEDFRLACRHERYPTRHQPHMGDSWPRSSAHEAAELNRQCWVLGHWV", "length": 322 }, "evidence": [ { "id": "I3LBP4", "url": "https://omabrowser.org/oma/group/I3LBP4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BM65-1", "protein_name": "Germ cell-specific gene 1-like protein", "gene_name": "GSG1L", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKTSRRGRALLAVALNLLALLFATTAFLTTHWCQGTQRVPKPGCGQGGSANCPNSGANATANGTAAPAVPAAPAAGNGPPGGALYSWETGDDRFLFRNFHTGIWYSCEEELGGLGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELFHSSNVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTKTVIEFRHKRKVFEQGYREEPTFIDPEAVKYFRERMEKGDGHEEEDFRLDCRHERYPARHQPHMGDSWPRSSAHEAAELNRQCWVLGHWV", "length": 330 }, "evidence": [ { "id": "I3LBP4", "url": "https://omabrowser.org/oma/group/I3LBP4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q4V922-1", "protein_name": "Germ cell-specific gene 1-like protein", "gene_name": "gsg1l", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTTRKCRALLSVGLNLLALLFSTTAFITTYWCEGTQRVPKPNCSKDRRHNCIDYGVNETDPSKVHYSWETGDDRFLFRHFHTGIWYSCEENIHGGGEKCRSFIDLAPASERGVLWLSVVSEVLYIMLLVVGFSLMCLELFHSSNVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQITVSLGPEDWRPHTWDYGWSFCMAWGSFTCCMAASVTTLNSYTKTVIEFRHKRKLFEQGLREEQTFLDPETFHYFRDRSVQSISSSVDVYPSHGSSHGNSRGKMRSPPAPVDQGDNTESLGEEQC", "length": 304 }, "evidence": [ { "id": "I3LBP4", "url": "https://omabrowser.org/oma/group/I3LBP4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6UXU4-1", "protein_name": "Germ cell-specific gene 1-like protein", "gene_name": "GSG1L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKTSRRGRALLAVALNLLALLFATTAFLTTHWCQGTQRVPKPGCGQGGRANCPNSGANATANGTAAPAAAAAAATASGNGPPGGALYSWETGDDRFLFRNFHTGIWYSCEEELSGLGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELFHSSNVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTKTVIEFRHKRKVFEQGYREEPTFIDPEAIKYFRERMEKRDGSEEDFHLDCRHERYPARHQPHMADSWPRSSAQEAPELNRQCWVLGHWV", "length": 331 }, "evidence": [ { "id": "I3LBP4", "url": "https://omabrowser.org/oma/group/I3LBP4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" }, { "name": "postsynaptic density membrane", "id": "GO:0098839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098839", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" }, { "name": "Schaffer collateral - CA1 synapse", "id": "GO:0098685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098685", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of signaling", "id": "GO:0023051", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0023051", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" }, { "name": "regulation of cell communication", "id": "GO:0010646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010646", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" }, { "name": "regulation of postsynaptic neurotransmitter receptor internalization", "id": "GO:0099149", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099149", "evidence": [ { "database": "UniProtKB", "id": "I3LBP4", "url": "https://www.uniprot.org/uniprotkb/I3LBP4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 58, "end_pos": 60, "annotation": "n_glycosylation_sequon" }, { "start_pos": 62, "end_pos": 64, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": 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"mass": { "chemical_mass": 59688.0, "monoisotopic_mass": 59688.0 }, "refseq": { "ac": "XP_005670005", "name": "cyclin-L1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670005" }, "gene_names": [ { "name": "CCNL1", "type": "recommended", "evidence": [ { "id": "I3LG02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ] }, { "name": "CCNL1", "type": "synonym", "evidence": [ { "id": "XP_005670005", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670005" } ] } ], "protein_names": [ { "name": "Cyclin L1", "type": "synonym", "evidence": [ { "id": "I3LG02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG02/entry#names_and_taxonomy" } ] }, { "name": "cyclin-L1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005670005", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670005" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], 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"https://www.ncbi.nlm.nih.gov/gene/100626293", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004367", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004367", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006671", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006671", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013763", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013763", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100626293", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626293", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GHKHRDG", "url": "https://omabrowser.org/oma/group/GHKHRDG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LG02", "url": "https://www.orthodb.org/?gene=I3LG02", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10026", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10026", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00134", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00134", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21797", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21797", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005670005", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005670005", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AMN9", "url": "https://www.uniprot.org/uniprotkb/A0A287AMN9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMN9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMN9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG02-1", "url": "https://www.uniprot.org/uniprotkb/I3LG02-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASGPHPTATAAAAASSAVPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKTEEKSPISVNVKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTRDDLKSSNRHGHKRKKSRSRSQSKSRDHSDAAKKHRHERGHHRDRRERSRSFERSHKGKHHGSSRSGHGRHRR", "length": 526, "header": "tr|I3LG02-1|I3LG02_PIG Isoform 1 of Cyclin L1 OS=Sus scrofa OX=9823 GN=CCNL1 PE=3 SV=1 CANONICAL=I3LG02-1" }, "isoforms": [ { "isoform_ac": "A0A287AMN9-1", "url": "https://www.uniprot.org/uniprotkb/I3LG02/entry#A0A287AMN9-1", "sequence": { "sequence": "MASGPHPTATAAAAASSAVPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKSDQLHLPKPG", "length": 172, "header": "tr|A0A287AMN9-1|A0A287AMN9_PIG Computationally mapped isoform of Cyclin L1 OS=Sus scrofa OX=9823 GN=CCNL1 PE=3 SV=1 CANONICAL=I3LG02-1" }, "locus": { "chromosome": "13", "start_pos": 97002415, "end_pos": 96999342, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070417.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070417.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063798.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063798.2" } ] } }, { "isoform_ac": "I3LG02-1", "url": "https://www.uniprot.org/uniprotkb/I3LG02/entry#I3LG02-1", "sequence": { "sequence": "MASGPHPTATAAAAASSAVPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKTEEKSPISVNVKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTRDDLKSSNRHGHKRKKSRSRSQSKSRDHSDAAKKHRHERGHHRDRRERSRSFERSHKGKHHGSSRSGHGRHRR", "length": 526, "header": "tr|I3LG02-1|I3LG02_PIG Isoform 1 of Cyclin L1 OS=Sus scrofa OX=9823 GN=CCNL1 PE=3 SV=1 CANONICAL=I3LG02-1" }, "locus": { "chromosome": "13", "start_pos": 97002415, "end_pos": 96986785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026182.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026182.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022995.1", "url": "https://www.ensembl.org/id/ENSSSCP00000022995.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 325, "start_aa": "Thr", "end_pos": 325, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr325", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 67, "start_aa": "Thr", "end_pos": 67, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr67", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626293", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626293", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0X2N2-1", "protein_name": "Cyclin L1", "gene_name": "CCNL1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASAAAHPAPPPAAVAPAAAVASSAAPPPPPAAPGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLQCETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRAKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICLTTLKLYTRKKPNYELLDKEVEKRKMALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKTEEKSPVPLNTKTIKKEPEERQQASKSPYNGMRKESKRSRSSRSASRSRSRTKSRSRSHTPRRHYNNRRSLSGTYSSRSRSRSRSHSGSPRRHHNHGSPHLKAKHGREELKSANRHGHKRKKSRSRSQSKSRDHSDAAKKHRHERGHHRDRRERSRSFERSHKGKHHSSSRSGHSRHRR", "length": 522 }, "evidence": [ { "id": "I3LG02", "url": "https://omabrowser.org/oma/group/I3LG02/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BJ67-1", "protein_name": "Cyclin L1", "gene_name": "CCNL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASGPHPTATAATAVSSAAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKTEEKSPISVNVKTIKKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTRDDLKSSNRHGHKRKKSRSRSQSKSRDHSDAVKKHRHERGHHRDRRERSRSFERSHKGKHHGGSRSGHGRHRR", "length": 526 }, "evidence": [ { "id": "I3LG02", "url": "https://omabrowser.org/oma/group/I3LG02/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q52KE7-1", "protein_name": "Cyclin-L1", "gene_name": "Ccnl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASGPHPTSTAAAAAAAAASASSAAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNLDGTPALSTLGGFSPASKPSSPREVKAEEKSPVSINVKTVKKEPEDRQQASKSPYNGVRKDSKRSRTSRSASRSRSRTRSRSRSHSPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTREDLKSSNRHGHKRKKSRSRSQSKTRDHSDVTKKHRHERGHHRDRRERSRSFERSHKGKHHGGSRSGHGRHRR", "length": 532 }, "evidence": [ { "id": "I3LG02", "url": "https://omabrowser.org/oma/group/I3LG02/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R1Q2-1", "protein_name": "Cyclin-L1", "gene_name": "Ccnl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASGPHPTSTAAAASASSAAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSVIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNLDGTPALSTLGGFSPASKPSSPREVKAEEKSPVSINVKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTREDLKSSNRHGHKRKKSRSRSQSKTRDHSDVTKKHRHERGHHRDRRERSRSFERSHKGKHHGGSRSGHGRHRR", "length": 527 }, "evidence": [ { "id": "I3LG02", "url": "https://omabrowser.org/oma/group/I3LG02/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9UK58-1", "protein_name": "Cyclin-L1", "gene_name": "CCNL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASGPHSTATAAAAASSAAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKAEEKSPISINVKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTRDDLKSSNRHGHKRKKSRSRSQSKSRDHSDAAKKHRHERGHHRDRRERSRSFERSHKSKHHGGSRSGHGRHRR", "length": 526 }, "evidence": [ { "id": "I3LG02", "url": "https://omabrowser.org/oma/group/I3LG02/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W526-1", "protein_name": "Cyclin-L1", "gene_name": "Dmel\\CG16903", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MATRGAGSTVVHTTVTALTVETITNVLTTVTSFHSNSVNISNNNSSSGAAPGADAAGGDAGGVAAAQADANKPIYPRLFNRIVLTLENSLIPEGKIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNSPPWFGIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNKTKEANTPPAVITVDRNNGSHNAWGGFIQRAIPLPLPSEKSPQKDSRSRSRSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPKHKKKSRHYSRSPTRSNSPHSKHRKSKSSRERSEYYSKKDRSGNPGSSNNLGDGDKYRNSVSNSGKHSRYSSSSSRRNSGGGGDGRSGGGGGGGGGGNGNHGSRGGHKHRDGDRSRDRKR", "length": 560 }, "evidence": [ { "id": "I3LG02", "url": "https://omabrowser.org/oma/group/I3LG02/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "pmid": "" }, { "name": "regulation of mRNA splicing, via spliceosome", "id": "GO:0048024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048024", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cyclin-dependent protein serine/threonine kinase regulator activity", "id": "GO:0016538", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016538", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "pmid": "" }, { "name": "cyclin L-CDK11 complex", "id": "GO:0180038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0180038", "evidence": [ { "database": "UniProtKB", "id": "I3LG02", "url": "https://www.uniprot.org/uniprotkb/I3LG02" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 229, "end_pos": 231, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFD9-1", "uniprot_ac": "I3LFD9", "uniprot_id": "I3LFD9_PIG", "mass": { "chemical_mass": 168550.0, "monoisotopic_mass": 168550.0 }, "refseq": { "ac": "XP_020943232", "name": "pleckstrin homology domain-containing family H member 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943232" }, "gene_names": [ { "name": "PLEKHH2", "type": "recommended", "evidence": [ { "id": "I3LFD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ] }, { "name": "PLEKHH2", "type": "synonym", "evidence": [ { "id": "XP_020943232", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943232" } ] } ], "protein_names": [ { "name": "Pleckstrin homology domain-containing family H member 2", "type": "recommended", "evidence": [ { "id": "I3LFD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFD9/entry#names_and_taxonomy" } ] }, { "name": "pleckstrin homology domain-containing family H member 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020943232", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943232" } ] } ], "function": [ { "annotation": "In the kidney glomerulus may play a role in linking podocyte foot processes to the glomerular basement membrane. May be involved in stabilization of F-actin by attenuating its depolymerization. Can recruit TGFB1I1 from focal adhesions to podocyte lamellipodia.", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9#function" }, { "database": "UniProtKB", "id": "ARBA00054898", "url": "https://www.uniprot.org/uniprotkb/ARBA00054898#function" }, { "database": "UniProtKB", "id": "A0A287AN26", "url": "https://www.uniprot.org/uniprotkb/A0A287AN26#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLEKHH2", "url": "https://www.uniprot.org/uniprotkb/I3LFD9", "locus": { "chromosome": "3", "start_pos": 96709059, "end_pos": 96833410, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008456", "url": "https://www.ensembl.org/id/ENSSSCG00000008456" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008456", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008456", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13206", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13206", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13282", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13282", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14473", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14473", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17179", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17179", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100512894", "url": "https://www.ncbi.nlm.nih.gov/gene/100512894", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000299", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000299", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000857", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000857", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014352", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014352", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019748", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019748", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019749", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019749", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035963", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035963", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512894", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512894", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LFD9", "url": "https://www.orthodb.org/?gene=I3LFD9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22903", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22903", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22903:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22903:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00373", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00373", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00784", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00784", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21989", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21989", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020943232", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943232", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AN26", "url": "https://www.uniprot.org/uniprotkb/A0A287AN26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AN26-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AN26-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFD9-1", "url": "https://www.uniprot.org/uniprotkb/I3LFD9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAELSETEGPIDWKERCVALESQLMKFRVQASKIRELLAEKMQQLERQVIDAERQAEKAFQQVQVMEEKLKAANIQTSESETRLYKKCQDLETLLQEKDDIIQNLELQLEEQKQIRIQEAKIIEEKAAKIKEWVTVKLNELELENQNLRLINQNQTEEIRTMQSKLQEVQGKKSSTVSIPKLSEGQRLSSLTFGCFLSRARSPPQVVKSEEMSKISSKEPEFSEGKDVEEMEIPEKSIDNQIQENNRGQRTLHQTPCVSEQNRKTRTSFVMDGGISQNSGAPGSDWSSDEDDGSKGRSKSRYTSTLSSHTSEEGVQCSRMGSETYLTASDDSSSLFEEETFGLKRPEHKKLYSWQQEAQWKAQNCPLGKGNSESSRKELDSSSDELNKKFQSQRLDYSSSSSEANTPSPILTPALSPKHPNSLPGRGTQLVPSSNMPPPKLRIPNVFSISVALAKRHLSQPQLSSDRMFGTNRNAISMIRPLRPQETDLDLVDGDSTEVLENMDTSCDDGLFSYDSLESPCSDDPETCDSVKKAACGKPPTPPLHRFPSWESRIYAVAKSGIRMSEAFNMENVNKNSVTMLSYTTSGLYTSLIYKNMTTPVYTTLKGKATQISSSPFLDDSSGSEEEDSSRSSSRTSESDSRSRSGPGSPRAMKRGVSLSSVASESDYAIPPDAYSTDTEYSQPEQKLPKTCSSSSDNGKNEPLEKSGYLLKMSGKVKTWKRRWFVLKGGELLYYKSPSDVIRKPQGHIELSASCSILRGDNKQTVQLTTEKHTYYLTADSPNILEEWIKVLQNVLRVQASNPLFLQPEGKPTVKGLLTKVKHGYSKRVWCTLIGKTLYYFRSQEDKFPLGQIKLWEAKVEEVDRSCDSDEDYEASGRSLLSTHYTIVIHPKDQGPTYLLIGSKHEKDTWLYHLTVAAGSNNVNVGSEFEQLVCKLLNIEGEPSSQIWRHPTLCHSKEGIISPLTTLPSEALQTEAIKLFKTCQLFINAAVDSPAIDYHISLAQSAFQICLTHPELQNEIFCQLIKQTRRRQPQNQPGPLQGWQLLALCVGLFLPHHPFLWLLRLHLKRNADSRTEFGKYAIYCQRCVERTQQNGDREARPSRMEILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSGFALFTDDPSGRDLEHCLQGNIKICDIISKWEQASKEQQPGKWEGTRTVRLTYKNRLYFSMQAHGETDREKLLLMYQTNDQIINGLFPLNRDLALEMAALLAQVEIGDFERPFSTPAGHVTNQCKANQTLKQVIEKFYPKRYRDDSSEEQLRQLCQRLSTRWMALRGHSATDCVRIYLTVARKWPFFGAKLFLAKPITPSSLGSTFMWLAVHEDGLSILEYNSMRLIVSHVYKSLMTFGGYQDDFMIVINNTHSKDKPTEKLLFAMAKPKILEITLLIASYINNFYQQKAVHHLSAPALLSARTRGPQARVMGSQPLLSSSRPTKGPTLL", "length": 1492, "header": "tr|I3LFD9-1|I3LFD9_PIG Isoform 1 of Pleckstrin homology domain-containing family H member 2 OS=Sus scrofa OX=9823 GN=PLEKHH2 PE=4 SV=3 CANONICAL=I3LFD9-1" }, "isoforms": [ { "isoform_ac": "A0A287AN26-1", "url": "https://www.uniprot.org/uniprotkb/I3LFD9/entry#A0A287AN26-1", "sequence": { "sequence": "MAELSETEGPIDWKERCVALESQLMKFRVQASKIRELLAEKMQQLERQVIDAERQAEKAFQQVQVMEEKLKAANIQTSESETRLYKKCQDLETLLQEKDDIIQNLELQLEEQLELENQNLRLINQNQTEEIRTMQSKLQEVQGKKSSTVSIPKLSEGQRLSSLTFGCFLSRARSPPQVVKSEEMSKISSKEPEFSEGKDVEEMEIPEKSIDNQIQENNRGQRTLHQTPCVSEQNRKTRTSFVMDGGISQNSGAPGSDWSSDEDDGSKGRSKSRYTSTLSSHTSEEGVQCSRMGSETYLTASDDSSSLFEEETFGLKRPEHKKLYSWQQEAQWKAQNCPLGKGNSESSRKELDSSSDELNKKFQSQRLDYSSSSSEANTPSPILTPALSPKHPNSLPGRGTQLVPSSNMPPPKLRIPNVFSISVALAKRHLSQPQLSSDRMFGTNRNAISMIRPLRPQETDLDLVDGDSTEVLENMDTSCDDGLFSYDSLESPCSDDPETCDSVKKAACGKPPTPPLHRFPSWESRIYAVAKSGIRMSEAFNMENVNKNSVTMLSYTTSGLYTSLIYKNMTTPVYTTLKGKATQISSSPFLDDSSGSEEEDSSRSSSRTSESDSRSRSGPGSPRAMKRGVSLSSVASESDYAIPPDAYSTDTEYSQPEQKLPKTCSSSSDNGKNEPLEKSGYLLKMSGKVKTWKRRWFVLKGGELLYYKSPSDVIRKPQGHIELSASCSILRGDNKQTVQLTTEKHTYYLTADSPNILEEWIKVLQNVLRVQASNPLFLQPEGKPTVKGLLTKVKHGYSKRVWCTLIGKTLYYFRSQEDKFPLGQIKLWEAKVEEVDRSCDSDEDYEASGRSLLSTHYTIVIHPKDQGPTYLLIGSKHEKDTWLYHLTVAAGSNNVNVGSEFEQLVCKLLNIEGEPSSQIWRHPTLCHSKEGIISPLTTLPSEALQTEAIKLFKTCQLFINAAVDSPAIDYHISLAQSAFQICLTHPELQNEIFCQLIKQTRRRQPQNQPGPLQGWQLLALCVGLFLPHHPFLWLLRLHLKRNADSRTEFGKYAIYCQRCVERTQQNGDREARPSRMEILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSGFALFTDDPSGRDLEHCLQGNIKICDIISKWEQASKEQQPGKWEGTRTVRLTYKNRLYFSMQAHGETDREKLLLMYQTNDQIINGLFPLNRDLALEMAALLAQVEIGDFERPFSTPAGHVTNQCKANQTLKQVIEKFYPKRYRDDSSEEQLRQLCQRLSTRWMALRGHSATDCVRIYLTVARKWPFFGAKLFLAKPITPSSLGSTFMWLAVHEDGLSILEYNSMRLIVSHVYKSLMTFGGYQDDFMIVINNTHSKDKPTEKLLFAMAKPKILEITLLIASYINNFYQQKAVHHLSAPALLSARTRGPQARVMGSQPLLSSSRPTKGPTLL", "length": 1464, "header": "tr|A0A287AN26-1|A0A287AN26_PIG Computationally mapped isoform of Pleckstrin homology domain-containing family H member 2 OS=Sus scrofa OX=9823 GN=PLEKHH2 PE=4 SV=2 CANONICAL=I3LFD9-1" }, "locus": { "chromosome": "3", "start_pos": 96825575, "end_pos": 96709368, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064821.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064821.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045458.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045458.3" } ] } }, { "isoform_ac": "I3LFD9-1", "url": "https://www.uniprot.org/uniprotkb/I3LFD9/entry#I3LFD9-1", "sequence": { "sequence": "MAELSETEGPIDWKERCVALESQLMKFRVQASKIRELLAEKMQQLERQVIDAERQAEKAFQQVQVMEEKLKAANIQTSESETRLYKKCQDLETLLQEKDDIIQNLELQLEEQKQIRIQEAKIIEEKAAKIKEWVTVKLNELELENQNLRLINQNQTEEIRTMQSKLQEVQGKKSSTVSIPKLSEGQRLSSLTFGCFLSRARSPPQVVKSEEMSKISSKEPEFSEGKDVEEMEIPEKSIDNQIQENNRGQRTLHQTPCVSEQNRKTRTSFVMDGGISQNSGAPGSDWSSDEDDGSKGRSKSRYTSTLSSHTSEEGVQCSRMGSETYLTASDDSSSLFEEETFGLKRPEHKKLYSWQQEAQWKAQNCPLGKGNSESSRKELDSSSDELNKKFQSQRLDYSSSSSEANTPSPILTPALSPKHPNSLPGRGTQLVPSSNMPPPKLRIPNVFSISVALAKRHLSQPQLSSDRMFGTNRNAISMIRPLRPQETDLDLVDGDSTEVLENMDTSCDDGLFSYDSLESPCSDDPETCDSVKKAACGKPPTPPLHRFPSWESRIYAVAKSGIRMSEAFNMENVNKNSVTMLSYTTSGLYTSLIYKNMTTPVYTTLKGKATQISSSPFLDDSSGSEEEDSSRSSSRTSESDSRSRSGPGSPRAMKRGVSLSSVASESDYAIPPDAYSTDTEYSQPEQKLPKTCSSSSDNGKNEPLEKSGYLLKMSGKVKTWKRRWFVLKGGELLYYKSPSDVIRKPQGHIELSASCSILRGDNKQTVQLTTEKHTYYLTADSPNILEEWIKVLQNVLRVQASNPLFLQPEGKPTVKGLLTKVKHGYSKRVWCTLIGKTLYYFRSQEDKFPLGQIKLWEAKVEEVDRSCDSDEDYEASGRSLLSTHYTIVIHPKDQGPTYLLIGSKHEKDTWLYHLTVAAGSNNVNVGSEFEQLVCKLLNIEGEPSSQIWRHPTLCHSKEGIISPLTTLPSEALQTEAIKLFKTCQLFINAAVDSPAIDYHISLAQSAFQICLTHPELQNEIFCQLIKQTRRRQPQNQPGPLQGWQLLALCVGLFLPHHPFLWLLRLHLKRNADSRTEFGKYAIYCQRCVERTQQNGDREARPSRMEILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSGFALFTDDPSGRDLEHCLQGNIKICDIISKWEQASKEQQPGKWEGTRTVRLTYKNRLYFSMQAHGETDREKLLLMYQTNDQIINGLFPLNRDLALEMAALLAQVEIGDFERPFSTPAGHVTNQCKANQTLKQVIEKFYPKRYRDDSSEEQLRQLCQRLSTRWMALRGHSATDCVRIYLTVARKWPFFGAKLFLAKPITPSSLGSTFMWLAVHEDGLSILEYNSMRLIVSHVYKSLMTFGGYQDDFMIVINNTHSKDKPTEKLLFAMAKPKILEITLLIASYINNFYQQKAVHHLSAPALLSARTRGPQARVMGSQPLLSSSRPTKGPTLL", "length": 1492, "header": "tr|I3LFD9-1|I3LFD9_PIG Isoform 1 of Pleckstrin homology domain-containing family H member 2 OS=Sus scrofa OX=9823 GN=PLEKHH2 PE=4 SV=3 CANONICAL=I3LFD9-1" }, "locus": { "chromosome": "3", "start_pos": 96825575, "end_pos": 96709368, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032161.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032161.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022781.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022781.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 541, "start_aa": "Thr", "end_pos": 541, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr541", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512894", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512894", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "pmid": "" }, { "name": "lamellipodium", "id": "GO:0030027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030027", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "pmid": "" }, { "name": "cortical actin cytoskeleton", "id": "GO:0030864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030864", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of actin filament depolymerization", "id": "GO:0030835", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030835", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "I3LFD9", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1289, "end_pos": 1291, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1412, "end_pos": 1414, "annotation": "n_glycosylation_sequon" }, { "start_pos": 154, "end_pos": 156, "annotation": "n_glycosylation_sequon" }, { "start_pos": 596, "end_pos": 598, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LFD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" }, { "id": "PS50057", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50057" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FERM", "eco_id": "ECO_0000259", "start_pos": 1121, "end_pos": 1451, "start_aa": "Phe", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LFD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" }, { "id": "PS51016", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51016" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MyTH4", "eco_id": "ECO_0000259", "start_pos": 955, "end_pos": 1110, "start_aa": "His", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LFD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFD9" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 703, "end_pos": 797, "start_aa": "Pro", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": 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"database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356182" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ARHGEF16", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2", "locus": { "chromosome": "6", "start_pos": 65048542, "end_pos": 65027442, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024223", "url": "https://www.ensembl.org/id/ENSSSCG00000024223" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024223", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024223", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00160", "url": 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"categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035797", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035797", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035899", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035899", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047270", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047270", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625324", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625324", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FHPYVVY", "url": "https://omabrowser.org/oma/group/FHPYVVY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LKZ2", "url": "https://www.orthodb.org/?gene=I3LKZ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12845", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12845", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12845:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12845:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00018", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00018", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00621", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00621", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-193648", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-416482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013408", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013408", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003356182", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356182", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ANX2", "url": "https://www.uniprot.org/uniprotkb/A0A287ANX2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANX2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANX2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKZ2-1", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSQRHSDSSLEEKLLEYRFHSELRLDAQGNPASTLPMVRGSLRSKSNAAFQPDSPEAQAPRAVVLSTQSPAALKMGTQQLIPRSLAVSSKAKTPARHQSFGAAMLSKEAARRDPRLLSAPSFSLDDMDVDTGSGGVLRRNLRNQSYRAAMKGLGTPGAGGGPVQLSPKLQALAEEPSQPPARYAAKNKKTLGRKRAHKGSFKDDPRLYQEIRERGLNTSHESDDDLLDETPSSEGPQKVDTPIVVKSYRPPQITWSQLPEVVELGILDKLPAEERKRQEAIFEILTSEFSYQHSLSILVAEFLQSRELRATMTQTEHHHLFSNITDVLSASQRFFEALEQRHKAQVCVEDISDILEEHAERHFHPYVIYCSNELYQQRALQRLTSSNAAFREALREIEQRPACGGLPMISFLILPMQRVTRLPLLADTLCLKTQGHPERYKAASRAFKAISKLVKQCNEGAHKMERTEQMYTLHTQLDFSKVKSLPLISASRWLLKRGELFVVEETGLFRKLASRPTCYLFLFNDVLVITKKKSEDSFVVQDYAQMDHIQVQKMEPSEASLPGGGSRSSSVPHPFQLTLLHNSEGRQEKILLSSDSASDRARWITALTYRERQGQGPSNKGDLLQVEVTKAYLAKQVDEITLQQADVVLILQQEDGWFYGERLRDGETGWFPEDFAQSITSRVAVEGNVRRMERLRVETDV", "length": 701, "header": "tr|I3LKZ2-1|I3LKZ2_PIG Isoform 1 of Rho guanine nucleotide exchange factor 16 OS=Sus scrofa OX=9823 GN=ARHGEF16 PE=4 SV=1 CANONICAL=I3LKZ2-1" }, "isoforms": [ { "isoform_ac": "A0A287ANX2-1", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2/entry#A0A287ANX2-1", "sequence": { "sequence": "MSQRHSDSSLEEKLLEYRFHSELRLDAQGNPASTLPMVRGSLRSKSNAAFQPTPPRPRHRGVVLSTQSPAALKMGTQQLIPRSLAVSSKAKTPARHQSFGAAMLSKEAARRDPRLLSAPSFSLDDMDVDTGSGGVLRRNLRNQSYRAAMKGLGTPGAGGGPVQLSPKLQALAEEPSQPPARYAAKNKKTLGRKRAHKGSFKDDPRLYQEIRERGLNTSHESDDDLLDETPSSEGPQKVDTPIVVKSYRPPQITWSQLPEVVELGILDKLPAEERKRQEAIFEILTSEFSYQHSLSILVAEFLQSRELRATMTQTEHHHLFSNITDVLSASQRFFEALEQRHKAQVCVEDISDILEEHAERHFHPYVIYCSNELYQQRALQRLTSSNAAFREALREIEQRPACGGLPMISFLILPMQRVTRLPLLADTLCLKTQGHPERYKAASRAFKAISKLVKQCNEGAHKMERTEQMYTLHTQLDFSKVKSLPLISASRWLLKRGELFVVEETGLFRKLASRPTCYLFLFNDVLVITKKKSEDSFVVQDYAQMDHIQVQKMEPSEASLPGGGSRSSSVPHPFQLTLLHNSEGRQEKILLSSDSASDRARWITALTYRERQGQGPSNKGDLLQVEVTKAYLAKQVDEITLQQADVVLILQQEDGWFYGERLRDGETGWFPEDFAQSITSRVAVEGNVRRMERLRVETDV", "length": 700, "header": "tr|A0A287ANX2-1|A0A287ANX2_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 16 OS=Sus scrofa OX=9823 GN=ARHGEF16 PE=4 SV=2 CANONICAL=I3LKZ2-1" }, "locus": { "chromosome": "6", "start_pos": 65048000, "end_pos": 65034864, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038247.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038247.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045630.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045630.2" } ] } }, { "isoform_ac": "I3LKZ2-1", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2/entry#I3LKZ2-1", "sequence": { "sequence": "MSQRHSDSSLEEKLLEYRFHSELRLDAQGNPASTLPMVRGSLRSKSNAAFQPDSPEAQAPRAVVLSTQSPAALKMGTQQLIPRSLAVSSKAKTPARHQSFGAAMLSKEAARRDPRLLSAPSFSLDDMDVDTGSGGVLRRNLRNQSYRAAMKGLGTPGAGGGPVQLSPKLQALAEEPSQPPARYAAKNKKTLGRKRAHKGSFKDDPRLYQEIRERGLNTSHESDDDLLDETPSSEGPQKVDTPIVVKSYRPPQITWSQLPEVVELGILDKLPAEERKRQEAIFEILTSEFSYQHSLSILVAEFLQSRELRATMTQTEHHHLFSNITDVLSASQRFFEALEQRHKAQVCVEDISDILEEHAERHFHPYVIYCSNELYQQRALQRLTSSNAAFREALREIEQRPACGGLPMISFLILPMQRVTRLPLLADTLCLKTQGHPERYKAASRAFKAISKLVKQCNEGAHKMERTEQMYTLHTQLDFSKVKSLPLISASRWLLKRGELFVVEETGLFRKLASRPTCYLFLFNDVLVITKKKSEDSFVVQDYAQMDHIQVQKMEPSEASLPGGGSRSSSVPHPFQLTLLHNSEGRQEKILLSSDSASDRARWITALTYRERQGQGPSNKGDLLQVEVTKAYLAKQVDEITLQQADVVLILQQEDGWFYGERLRDGETGWFPEDFAQSITSRVAVEGNVRRMERLRVETDV", "length": 701, "header": "tr|I3LKZ2-1|I3LKZ2_PIG Isoform 1 of Rho guanine nucleotide exchange factor 16 OS=Sus scrofa OX=9823 GN=ARHGEF16 PE=4 SV=1 CANONICAL=I3LKZ2-1" }, "locus": { "chromosome": "6", "start_pos": 65048000, "end_pos": 65034864, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030569.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030569.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024757.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024757.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625324", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625324", "resource": "KEGG Pathway" }, { "id": "R-SSC-193648", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "resource": "Reactome", "description": "NRAGE signals death through JNK" }, { "id": "R-SSC-416482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "resource": "Reactome", "description": "G alpha (12/13) signalling events" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013408", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013408", "resource": "Reactome", "description": "RHOG GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2QQ48-1", "protein_name": "Rho guanine nucleotide exchange factor 16 isoform X3", "gene_name": "Arhgef16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQRHSDSSLDEKLLEYRFHAELQLDANGNPMSGLPMVRGSLRARTNAAFEPEPSEPPQVPLEGEGSRPIILSTQSPAALKMGTQQLIPKSLAVASKAKTKSPARHQSFGAAVLSKEAARRDPRLFSTPSFSLDDMDVDASTAGNLKRNIRNQSYRAAMKGLGPPSSKGDSCQLGPKLQALAEEAAQPPARSPAKNKKTLGRKRAHKGSFKDDPQLYQEIRERGLNTSHESDDDILDEPSSPEATQRADTTIVVKSYRPAQLTWSQLPEVLESGVLDTLSVEERKRQEAIFEILTSEFSYLHSLSILVTEFLQSRELRATMTQTEHHHLFSNILDVLAASQKFFEALEQRHKAQVCVEDISDILEEHAEKHFHPYVAYCSNEVYQQRTLQKLSNSNTAFREALREIEKRPACGGLPMISFLILPMQRVTRLPLLTDTLCLKTQGHPERYKAASRALKAISKLVKQCNEGAHKMERTEQMYTLHTQLDFSKVNKSLPLISASRWLLKRGELFLLEESSIFRKIASRPTCYLFLFNDFLVVTKKKSEESYLVQDYAQLDHVQVRKLEASEPSLPGGSGRSSSVPHPFQVNLLHNSEGRQEQILLSSDSASDRARWITALTHKEREWQGITNKGELPQVEITKAYFAKQADEITLQQADVVLVLQEEDGWLHGERLRDGETGWFPESFARSITSRVAVEGNVRRMERLRVETDV", "length": 711 }, "evidence": [ { "id": "I3LKZ2", "url": "https://omabrowser.org/oma/group/I3LKZ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0ZCQ6-1", "protein_name": "Rho guanine nucleotide exchange factor 16", "gene_name": "ARHGEF16", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQWRSRMLYVVFIWGAQRAVWLKRRWAGLAPSKERWSRVLEGLWGHQEPPSTLGVGAEAEHPSARSAPGLWGPSGSTLKRAVWDPQWYGDGQSERHRDSGVGSSRLPTQHCEPCRSCTLSLSRGQCLFPVCPSDCLSLAQLSAPCATAMSRSPPAAEDQTFLLEYRCHPLRSGPPAPTSPPGKRNPDPAMGCFPLAEPRRIVLSTDSPAALKVGTQQLIPRSLAVSTKTKNTTRNPSTGSIPEAACSGQKRASVPSVTVQGDTEEDGGGMLKRNLRNMSYRAAMKGAGTEMEPVSTVPTLKPMLEEGSAPPARSPGRSKRTLGRKRVQKHGGSFKDQPRLYQEIRERGLNSVSHESDEDLLEEPIPEEPSLPGAAIVVRSYRPAQVTWSQLPEVLEAGVLETITPEERKRQEAMFEIITSEFSYMHSLSVLVGCFKKSEELKETMTQTEHHHLFSNISDILAVSTSFFQALEKRHQENVLIPDISDIVEEHASKHFNPYISYCSNEVYQQRTLQRLLNTNPLFKEALKQIERKPECGGLPLISFLILPMQRVTRLPLLLDTVCQKTQACTAAYGAATRALKAISKLVKNCNEGARAMERTEQLCTLQKQLEFGKKKPFPLISASRWLLKRGELYLLSSEEGGIFRKGSGRVCHLFLFNDVLIITKKKSEESYTVMNYAMLDQVSVEKVETTEPPSPPPGRPGGHLLRVAMERDSEGRREEVMLSAETLSERARWVTALMHRERERPDSTPRGDLSQVEITRAYMAKQADEISLQQADVVLLLGEEDGWCWGERLRDGERGWFPQACARPITSRVAVECNVRRMERLRIETDV", "length": 832 }, "evidence": [ { "id": "I3LKZ2", "url": "https://omabrowser.org/oma/group/I3LKZ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q3U5C8-1", "protein_name": "Rho guanine nucleotide exchange factor 16", "gene_name": "Arhgef16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSQRHSDSSLDEKLLEYRFHAELRLDANGNPIPGLPMVRSSLKARANAAFEPDASEPLPPPPSPEDEEPPRPIVLSTQSPAALKMGTQQLIPKSLAVASKAKTKSPARHQSFGAAVLSKEAARRNPQLFSAPSFSLDDMDMDMVTTGNLRRNLRNQSYRAAMKGPGPPSSKGDSVQLGPKLQALAEEAAQPPSRYPAKNKKTLGRKRAHKGSFKDDPQLYQEIRERGLNTSHESDDDILDEPSGPVGTQRADTTIVVKSYRPAQLTWSQLPEVLESGVLDTLSTEERKRQEAIFEILTSEFSYLHSLSILVTEFLQSRELRATMTQTEHHHLFSNILDVMSASQKFFEALEQRHKAQVCVEDISDILEDHAQHHFHPYIAYCSNEVYQQRTLQKLSNSNAAFRDVLKEIEKRPACGGLPMISFLILPMQRVTRLPLLTDTLCLKTQGHPERYKAASQALKAISKLVKQCNEGAHKMERTEQIYTLNMQLDFGKVKSLPLISASRWLLKRGELFLLEESSIFRKIASRPTCYLFLFNDVLVVTKKKSEESYLVQDYAQLDHVQVRKLEPSEPLLPGGSSRSSSVPYPFQVNLLHNSEGRQEQILLSSDSASDRARWITALTYKERQWQGITNKGELPQVEVTKAYFAKQADEITLQQADIVLVLQEEDGWLHGERLRDGETGWFPESFAHSITSRVAVEGNVRRMERLRVETDV", "length": 713 }, "evidence": [ { "id": "I3LKZ2", "url": "https://omabrowser.org/oma/group/I3LKZ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5VV41-1", "protein_name": "Rho guanine nucleotide exchange factor 16", "gene_name": "ARHGEF16", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQRHSDSSLEEKLLGHRFHSELRLDAGGNPASGLPMVRGSPRVRDDAAFQPQVPAPPQPRPPGHEEPWPIVLSTESPAALKLGTQQLIPKSLAVASKAKTPARHQSFGAAVLSREAARRDPKLLPAPSFSLDDMDVDKDPGGMLRRNLRNQSYRAAMKGLGKPGGQGDAIQLSPKLQALAEEPSQPHTRSPAKNKKTLGRKRGHKGSFKDDPQLYQEIQERGLNTSQESDDDILDESSSPEGTQKVDATIVVKSYRPAQVTWSQLPEVVELGILDQLSTEERKRQEAMFEILTSEFSYQHSLSILVEEFLQSKELRATVTQMEHHHLFSNILDVLGASQRFFEDLEQRHKAQVLVEDISDILEEHAEKHFHPYIAYCSNEVYQQRTLQKLISSNAAFREALREIERRPACGGLPMLSFLILPMQRVTRLPLLMDTLCLKTQGHSERYKAASRALKAISKLVRQCNEGAHRMERMEQMYTLHTQLDFSKVKSLPLISASRWLLKRGELFLVEETGLFRKIASRPTCYLFLFNDVLVVTKKKSEESYMVQDYAQMNHIQVEKIEPSELPLPGGGNRSSSVPHPFQVTLLRNSEGRQEQLLLSSDSASDRARWIVALTHSERQWQGLSSKGDLPQVEITKAFFAKQADEVTLQQADVVLVLQQEDGWLYGERLRDGETGWFPEDFARFITSRVAVEGNVRRMERLRVETDV", "length": 709 }, "evidence": [ { "id": "I3LKZ2", "url": "https://omabrowser.org/oma/group/I3LKZ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" }, { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" }, { "name": "PDZ domain binding", "id": "GO:0030165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030165", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" }, { "name": "receptor tyrosine kinase binding", "id": "GO:0030971", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030971", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "regulation of actin cytoskeleton organization", "id": "GO:0032956", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032956", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" }, { "name": "regulation of Cdc42 protein signal transduction", "id": "GO:0032489", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032489", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" }, { "name": "cell chemotaxis", "id": "GO:0060326", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060326", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" }, { "name": "positive regulation of protein localization to plasma membrane", "id": "GO:1903078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903078", "evidence": [ { "database": "UniProtKB", "id": "I3LKZ2", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 143, "end_pos": 145, "annotation": "n_glycosylation_sequon" }, { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 323, "end_pos": 325, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LKZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" }, { "id": "PS50010", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50010" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DH", "eco_id": "ECO_0000259", "start_pos": 276, "end_pos": 460, "start_aa": "Lys", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LKZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 493, "end_pos": 612, "start_aa": "Trp", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LKZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKZ2" }, { "id": "PS50002", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH3", "eco_id": "ECO_0000259", "start_pos": 621, "end_pos": 681, "start_aa": "Gly", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 143, "end_pos": 145 }, { "start_pos": 217, "end_pos": 219 }, { "start_pos": 323, "end_pos": 325 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LKS0-1", "uniprot_ac": "I3LKS0", "uniprot_id": "I3LKS0_PIG", "mass": { "chemical_mass": 40951.0, "monoisotopic_mass": 40951.0 }, "refseq": {}, "gene_names": [ { "name": "CDK10", "type": "recommended", "evidence": [ { "id": "I3LKS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ] } ], "protein_names": [ { "name": "Cyclin-dependent kinase 10", "type": "recommended", "evidence": [ { "id": "I3LKS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#names_and_taxonomy" } ] }, { "name": "2.7.11.22", "type": "synonym", "evidence": [ { "id": "I3LKS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#names_and_taxonomy" } ] }, { "name": "Cell division protein kinase 10", "type": "synonym", "evidence": [ { "id": "I3LKS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Cyclin-dependent kinase that phosphorylates the transcription factor ETS2 (in vitro) and positively controls its proteasomal degradation (in cells). Involved in the regulation of actin cytoskeleton organization through the phosphorylation of actin dynamics regulators such as PKN2. Is a negative regulator of ciliogenesis through phosphorylation of PKN2 and promotion of RhoA signaling.", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0#function" }, { "database": "UniProtKB", "id": "ARBA00059360", "url": "https://www.uniprot.org/uniprotkb/ARBA00059360#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CDK10", "url": "https://www.uniprot.org/uniprotkb/I3LKS0", "locus": { "chromosome": "6", "start_pos": 332242, "end_pos": 339142, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025401", "url": "https://www.ensembl.org/id/ENSSSCG00000025401" } ] } } ], "crossref": [ { "id": "I3LKS0", "url": "https://alphafold.ebi.ac.uk/entry/I3LKS0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000025401", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025401", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07845", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07845", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044093", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044093", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050108", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050108", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WVARATN", "url": "https://omabrowser.org/oma/group/WVARATN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24056", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24056", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24056:SF508", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24056:SF508", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287ASM6", "url": "https://www.uniprot.org/uniprotkb/A0A287ASM6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASM6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ASM6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QV04", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QV04", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QV04-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QV04-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8U2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8U2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8U2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8U2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGA5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGA5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGA5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGA5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKS0-1", "url": "https://www.uniprot.org/uniprotkb/I3LKS0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGEPEPESEQIRLKCIRKEGFFTVPPEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHQNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGTPVKPMTPKVVTLWYRAPELLLGSTMQTPSIDMWAVGCILAELLAHKPLLPGTSEIHQVDLIVQLLGTPSENIWPGFSQLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLNLLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKPAPTSSGAESQSRRCKP", "length": 361, "header": "tr|I3LKS0-1|I3LKS0_PIG Isoform 1 of Cyclin-dependent kinase 10 OS=Sus scrofa OX=9823 GN=CDK10 PE=3 SV=1 CANONICAL=I3LKS0-1" }, "isoforms": [ { "isoform_ac": "A0A287ASM6-1", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#A0A287ASM6-1", "sequence": { "sequence": "MTGRGPVLTRPLRLHLPSCGASACVTDRARDTQTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHQNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGTPVKPMTPKVVTLWYRAPELLLGSTMQTPSIDMWAVGCILAELLAHKPLLPGTSEIHQVDLIVQLLGTPSENIWPGFSQLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLNLLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKPAPTSSGAESQSRRCKP", "length": 334, "header": "tr|A0A287ASM6-1|A0A287ASM6_PIG Computationally mapped isoform of Cyclin dependent kinase 10 OS=Sus scrofa OX=9823 GN=CDK10 PE=3 SV=2 CANONICAL=I3LKS0-1" }, "locus": { "chromosome": "6", "start_pos": 338610, "end_pos": 332777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045287.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045287.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047096.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047096.2" } ] } }, { "isoform_ac": "A0A5G2QV04-1", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#A0A5G2QV04-1", "sequence": { "sequence": "RARDTQTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHQNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGTPVKPMTPKVVTLWYRAPELLLGSTMQTPSIDMWAVGCILAELLAHKPLLPGTSEIHQVDLIVQLLGTPSENIWPGFSQLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLNLLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKPAPTSSGAESQSRRCKP", "length": 307, "header": "tr|A0A5G2QV04-1|I3LKS0_PIG Computationally mapped isoform of Cyclin-dependent kinase 10 OS=Sus scrofa OX=9823 GN=CDK10 PE=3 SV=1 CANONICAL=I3LKS0-1" }, "locus": { "chromosome": "6", "start_pos": 336567, "end_pos": 332777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077459.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077459.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062001.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062001.1" } ] } }, { "isoform_ac": "A0A5G2R8U2-1", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#A0A5G2R8U2-1", "sequence": { "sequence": "MGEPEPESEQIRLKCIRKEGFFTVPPEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHQNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGTPVKPMTPKVVTLCTPDGSRAPGVGCILAELLAHKPLLPGTSEIHQVDLIVQLLGTPSENIWPGFSQLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLNLLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKPAPTSSGAESQSRRCKP", "length": 349, "header": "tr|A0A5G2R8U2-1|A0A5G2R8U2_PIG Computationally mapped isoform of Cyclin dependent kinase 10 OS=Sus scrofa OX=9823 GN=CDK10 PE=3 SV=1 CANONICAL=I3LKS0-1" }, "locus": { "chromosome": "6", "start_pos": 339074, "end_pos": 332777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076247.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076247.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073501.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073501.1" } ] } }, { "isoform_ac": "A0A5G2RGA5-1", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#A0A5G2RGA5-1", "sequence": { "sequence": "MGEPEPESEQIRLKCIRKEGFFTVPPEHRIVPGTPRRTRLLP", "length": 42, "header": "tr|A0A5G2RGA5-1|I3LKS0_PIG Computationally mapped isoform of Cyclin-dependent kinase 10 OS=Sus scrofa OX=9823 GN=CDK10 PE=3 SV=1 CANONICAL=I3LKS0-1" }, "locus": { "chromosome": "6", "start_pos": 339074, "end_pos": 336531, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099842.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099842.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075000.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075000.1" } ] } }, { "isoform_ac": "I3LKS0-1", "url": "https://www.uniprot.org/uniprotkb/I3LKS0/entry#I3LKS0-1", "sequence": { "sequence": "MGEPEPESEQIRLKCIRKEGFFTVPPEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHQNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGTPVKPMTPKVVTLWYRAPELLLGSTMQTPSIDMWAVGCILAELLAHKPLLPGTSEIHQVDLIVQLLGTPSENIWPGFSQLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLNLLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKPAPTSSGAESQSRRCKP", "length": 361, "header": "tr|I3LKS0-1|I3LKS0_PIG Isoform 1 of Cyclin-dependent kinase 10 OS=Sus scrofa OX=9823 GN=CDK10 PE=3 SV=1 CANONICAL=I3LKS0-1" }, "locus": { "chromosome": "6", "start_pos": 339074, "end_pos": 332777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023993.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023993.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024685.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024685.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QV04", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QV04" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A1Z840-1", "protein_name": "2.7.11.22", "gene_name": "Cdc2rk", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSSLKSNDVDTNPAPDPQAPITRKGFLMSLNTGTPMPIPEQNLFGRCRPVSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMILKQCHHENIVRLREVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVSNLLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILGELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNLTPKFHMIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTFPQHRNNAAPAPAVQPPADIPISDLLNVFIKRQRME", "length": 387 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "F1QKU6-1", "protein_name": "Cyclin-dependent kinase 10", "gene_name": "cdk10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MESTADTDLEPLKLKSLKTDRTFVIPHSERLGKCRSVKEFEKINRIGEGTYGIVYRARDTRTNEIVALKKVRMDKEKDGIPISSLREINLLIRLRHPNIVELKEVVVGSHLESLFLVMSYCEQDLASLLENMQSPFSEAQVKCIVLQLLKGLAYLHHNFILHRDLKVSNLLMTDKGCVKIADFGLARVYGIPLQPMTPRVVTLWYRAPELLLGTKTQTTALDMWAVGCIFAELLAHKPLLPGASEIQQLDLIVQLLGTPNESIWPGFSRLPLVGQYSLRKQPYNNLKNKFTWLSEAGLRLLNLLFMYNPQRRATAIDCLESSYFKEKPLPCEPELMPTFPHHRNKRSASETEHQTKRSKV", "length": 360 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3GRR1-1", "protein_name": "Cyclin-dependent kinase 10", "gene_name": "Cdk10", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVDLESDQIRLKCIRKEGFFTVPPEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIMLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLAGQYSLRKQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPAATEGQNKRCKP", "length": 360 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q15131-1", "protein_name": "Cyclin-dependent kinase 10", "gene_name": "CDK10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEPDLECEQIRLKCIRKEGFFTVPPEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP", "length": 360 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q2TBL8-1", "protein_name": "Cyclin-dependent kinase 10", "gene_name": "CDK10", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGEPEPEQIRLKCVRKEGFFTVPPEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTHTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGIPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQVDLIVQLLGTPSENIWPGFSQLPLASQYSLRKQPYNNLKHKFPWLSEAGLRLMNLLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRATPATSLGTESQSRRGRP", "length": 361 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3UMM4-1", "protein_name": "Cyclin-dependent kinase 10", "gene_name": "Cdk10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEVDLESDQIRLKCIRKEGFFTVPPEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIMLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLAGQYSLRKQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATSGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPAAAEGQSKRCRP", "length": 360 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q4KM47-1", "protein_name": "Cyclin-dependent kinase 10", "gene_name": "Cdk10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQCQIWVRHHLCCSFQIPTLAASLFQLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCILLQVLRGLQYLHRSFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLAGQYSLRKQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPAATEGQSKRCRP", "length": 358 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q54RB2-1", "protein_name": "Cyclin-dependent kinase 11", "gene_name": "cdk11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIQENENKETCNIKENENKEILKENFKNKEKQYFSSLRSPYSACRSVDCFKKLYTINEGAFGVVYCAQDKETEEIVALKKIKMEREREGIPITSVREIKVLMELKHDNIVQIKEIVLGKNINSIFMAMEFIDHDLRGLMEVIKKPFLPSEIKTLIQQLLNGVSYMHDNWVIHRDLKTANLLYTNKGVLKIADFGLAREYGSPLKPLSKGVVTLWYRAPELLLDTEIYTPAIDIWSVGCIFAEIISKEVLLQGSSEIDQMDKIFKLFGTPTEKSWPAFFKLPLAKYFNLTDQPYNNLKSKFPHITDNAFDLLNKLLELNPEARISASDALKHPYFFENPQPRDPLLMPTWPSSHKKT", "length": 358 }, "evidence": [ { "id": "I3LKS0", "url": "https://omabrowser.org/oma/group/I3LKS0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" }, { "name": "cyclin-dependent protein serine/threonine kinase activity", "id": "GO:0004693", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004693", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "regulation of mitotic cell cycle", "id": "GO:0007346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007346", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" }, { "name": "negative regulation of cilium assembly", "id": "GO:1902018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902018", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" }, { "name": "regulation of actin cytoskeleton organization", "id": "GO:0032956", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032956", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" }, { "name": "G2/M transition of mitotic cell cycle", "id": "GO:0000086", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000086", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" }, { "name": "cell projection organization", "id": "GO:0030030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030030", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "I3LKS0", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "46608", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/46608" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LKS0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 361, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LKS0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LKS0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LKS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKS0" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 39, "end_pos": 323, "start_aa": "Phe", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], 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C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LLM8", "url": "https://www.uniprot.org/uniprotkb/I3LLM8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626046", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626046", "resource": "KEGG Pathway" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YMZ5-1", "protein_name": "Synaptogyrin", "gene_name": "SYNGR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"uniprot_canonical_ac": "I3LC92-1", "uniprot_ac": "I3LC92", "uniprot_id": "I3LC92_PIG", "mass": { "chemical_mass": 49638.0, "monoisotopic_mass": 49638.0 }, "refseq": { "ac": "XP_020949080", "name": "mitochondrial enolase superfamily member 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949080" }, "gene_names": [ { "name": "ENOSF1", "type": "recommended", "evidence": [ { "id": "I3LC92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ] }, { "name": "ENOSF1", "type": "synonym", "evidence": [ { "id": "XP_020949080", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949080" } ] } ], "protein_names": [ { "name": "Mitochondrial enolase superfamily member 1", "type": "recommended", "evidence": [ { "id": "I3LC92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC92/entry#names_and_taxonomy" } ] }, { "name": "4.2.1.68", "type": "synonym", "evidence": [ { "id": "I3LC92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC92/entry#names_and_taxonomy" } ] }, { "name": "L-fuconate dehydratase", "type": "synonym", "evidence": [ { "id": "I3LC92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC92/entry#names_and_taxonomy" } ] }, { "name": "mitochondrial enolase superfamily member 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020949080", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949080" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ENOSF1", "url": "https://www.uniprot.org/uniprotkb/I3LC92", "locus": { "chromosome": "6", "start_pos": 105645113, "end_pos": 105613215, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027169", "url": "https://www.ensembl.org/id/ENSSSCG00000027169" } ] } } ], "crossref": [ { "id": "ENSSSCG00000027169", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027169", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03324", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03324", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100626946", "url": "https://www.ncbi.nlm.nih.gov/gene/100626946", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013342", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013342", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029017", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029017", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029065", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029065", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034610", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034610", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046945", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046945", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "SGAIDVC", "url": "https://omabrowser.org/oma/group/SGAIDVC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LC92", "url": "https://www.orthodb.org/?gene=I3LC92", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13794", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13794", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13794:SF58", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13794:SF58", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02746", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02746", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13378", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13378", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020949080", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949080", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "22772", "url": "https://www.rhea-db.org/rhea/22772", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AWU9", "url": "https://www.uniprot.org/uniprotkb/A0A287AWU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AWU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AWU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R978", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R978", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R978-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R978-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFF5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFF5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFF5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC92-1", "url": "https://www.uniprot.org/uniprotkb/I3LC92-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVRGRISRLSVHDLRFPTSLEGHGSDAMHTDPDYSAAYVVLETDAEDGLKGCGLTFTLGKGTEVVVCAVNALAPHLLNKDLGDIVGDFRGFYRQLTSDGQLRWIGPEKGAVHLATAAVLNAVWDLWAKQEGKPLWKLLVDMDPRMLLSCIDFRYITDVLTEEEAYEILQKGQVGKKEREEQMQTQGYPAYTTSCAWLGYTDTRLTQLCSEALKDGWTRFKVKVGADLQDDIRRCRLIRNVIGPEKTLMMDANQRWDVPEAVEWMAKLAEFKPLWIEEPTCPDDILGHAAISKALAPLGIGVATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFGVPVCPHAGGVGLCELVQHLIIFDFISVSASLKDRMCEYVDHLHEHFKYPVVIRKACYMPPKDAGYSTEMKEESVRQHQYPDGEVWKELLAAQGN", "length": 443, "header": "tr|I3LC92-1|I3LC92_PIG Isoform 1 of Mitochondrial enolase superfamily member 1 OS=Sus scrofa OX=9823 GN=ENOSF1 PE=1 SV=2 CANONICAL=I3LC92-1" }, "isoforms": [ { "isoform_ac": "A0A287AWU9-1", "url": "https://www.uniprot.org/uniprotkb/I3LC92/entry#A0A287AWU9-1", "sequence": { "sequence": "MQKMDSRAVDSPSLWEKALKLIGPEKGAVHLATAAVLNAVWDLWAKQEGKPLWKLLVDMDPRMLLSCIDFRYITDVLTEEEAYEILQKGQVGKKEREEQMQTQGYPAYTTSCAWLGYTDTRLTQLCSEALKDGWTRFKVKVGADLQDDIRRCRLIRNVIGPEKTLMMDANQRWDVPEAVEWMAKLAEFKPLWIEEPTCPDDILGHAAISKALAPLGIGVATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFGVPVCPHAGGVGLCELVQHLIIFDFISVSASLKDRMCEYVDHLHEHFKYPVVIRKACYMPPKDAGYSTEMKEESVRQHQYPDGEVWKELLAAQGN", "length": 361, "header": "tr|A0A287AWU9-1|A0A287AWU9_PIG Computationally mapped isoform of Mitochondrial enolase superfamily member 1 OS=Sus scrofa OX=9823 GN=ENOSF1 PE=1 SV=2 CANONICAL=I3LC92-1" }, "locus": { "chromosome": "6", "start_pos": 105642176, "end_pos": 105619109, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050505.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050505.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048411.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048411.2" } ] } }, { "isoform_ac": "A0A5G2R978-1", "url": "https://www.uniprot.org/uniprotkb/I3LC92/entry#A0A5G2R978-1", "sequence": { "sequence": "MVRGRISRLSVHDLRFPTSLEGHGSDAMHTDPDYSAAYVVLETDAEDGLKGCGLTFTLGKGTEVVVCAVNALAPHLLNKDLGDIVGDFRGFYRQLTSDGQLRWIGPEKGAVHLATAAVLNAVWDLWAKQEGKDPRMLLSCIDFRYITDVLTEEEAYEILQKGQVGKKEREEQMQTQGYPAYTTSCAWLGYTDTRLTQLCSEALKDGWTRFKVKVGADLQDDIRRCRLIRNVIGPEKTLMMDANQRWDVPEAVEWMAKLAEFKPLWIEEPTCPDDILGHAAISKCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFGVPVCPHAGGVGLCELVQHLIIFDFISVSASLKDRMCEYVDHLHEHFKYPVVIRKACYMPPKDAGYSTEMKEESVRQHQYPDGEVWKELLAAQGN", "length": 420, "header": "tr|A0A5G2R978-1|A0A5G2R978_PIG Computationally mapped isoform of Mitochondrial enolase superfamily member 1 OS=Sus scrofa OX=9823 GN=ENOSF1 PE=1 SV=1 CANONICAL=I3LC92-1" }, "locus": { "chromosome": "6", "start_pos": 105642176, "end_pos": 105613303, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087463.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087463.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072879.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072879.1" } ] } }, { "isoform_ac": "A0A5G2RFF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LC92/entry#A0A5G2RFF5-1", "sequence": { "sequence": "MVRGRISRLSVHDLRFPTSLEGHGSDAMVGANASGLIDARHTDPDYSAAYVVLETDAEDGLKGCGLTFTLGKGTEVVVCAVNALAPHLLNKDLGDIVGDFRGFYRQLTSDGQLRWIGPEKGAVHLATAAVLNAVWDLWAKQEGKPLWKLLVDMDPRMLLSCIDFRYITDVLTEEEAYEILQKGQVGKKEREEQMQTQGYPAYTTSCAWLGYTDTRLTQLCSEALKDGWTRFKVKVGADLQDDIRRCRLIRNVIGPEKTLMMDANQRWDVPEAVEWMAKLAEFKPLWIEEPTCPDDILGHAAISKCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFGVPVCPHAGGVGLCELVQHLIIFDFISVSASLKDRMCEYVDHLHEHFKYPVVIRKACYMPPKDAGYSTEMKEESVRQHQYPDGEVWKELLAAQGN", "length": 441, "header": "tr|A0A5G2RFF5-1|A0A5G2RFF5_PIG Computationally mapped isoform of Mitochondrial enolase superfamily member 1 OS=Sus scrofa OX=9823 GN=ENOSF1 PE=1 SV=1 CANONICAL=I3LC92-1" }, "locus": { "chromosome": "6", "start_pos": 105642176, "end_pos": 105613303, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081937.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081937.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069744.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069744.1" } ] } }, { "isoform_ac": "I3LC92-1", "url": "https://www.uniprot.org/uniprotkb/I3LC92/entry#I3LC92-1", "sequence": { "sequence": "MVRGRISRLSVHDLRFPTSLEGHGSDAMHTDPDYSAAYVVLETDAEDGLKGCGLTFTLGKGTEVVVCAVNALAPHLLNKDLGDIVGDFRGFYRQLTSDGQLRWIGPEKGAVHLATAAVLNAVWDLWAKQEGKPLWKLLVDMDPRMLLSCIDFRYITDVLTEEEAYEILQKGQVGKKEREEQMQTQGYPAYTTSCAWLGYTDTRLTQLCSEALKDGWTRFKVKVGADLQDDIRRCRLIRNVIGPEKTLMMDANQRWDVPEAVEWMAKLAEFKPLWIEEPTCPDDILGHAAISKALAPLGIGVATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFGVPVCPHAGGVGLCELVQHLIIFDFISVSASLKDRMCEYVDHLHEHFKYPVVIRKACYMPPKDAGYSTEMKEESVRQHQYPDGEVWKELLAAQGN", "length": 443, "header": "tr|I3LC92-1|I3LC92_PIG Isoform 1 of Mitochondrial enolase superfamily member 1 OS=Sus scrofa OX=9823 GN=ENOSF1 PE=1 SV=2 CANONICAL=I3LC92-1" }, "locus": { "chromosome": "6", "start_pos": 105642176, "end_pos": 105613303, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026139.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026139.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021666.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021666.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1Q510-1", "protein_name": "Mitochondrial enolase superfamily member 1", "gene_name": "enosf1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAIKIINVSVRDVRFPTSLEQHGSDAMHTDPDYSVAYVVLETDKAELKGYGLTFTVGRGTEIVVCAVKALSTLVVGKTLEEITSDFRGFYRLLSSDGQMRWIGPEKGVIHLATAAVLNAVWDLWARVERKPLWKLLVDMDPAKLISCIDFRYLTDALTEQEALDILVKGKKDQKSREEQMLKEGYPAYTTSCAWLGYTDQQLTQLCNEALAQGWTKFKVKVGADLQDDIRRCSLIRKLIGPNNTLMIDANQRWDVNEAITWVTKLAEFQPLWIEEPTCPDDILGHASISKALAPLGIGVASGEQCHNRVMFKQFLQASALQFVQIDSCRVGSVNENLATILMAAKFNVPVCPHAGGVGLCELVQHLILFDYISVSASLSNRMCEFVDHLHEHFKSPTVIRNAKYIPPKDPGFSCEMLEESVKKHQYPEGEVWRAIEKQQK", "length": 441 }, "evidence": [ { "id": "I3LC92", "url": "https://omabrowser.org/oma/group/I3LC92/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2KIA9-1", "protein_name": "Mitochondrial enolase superfamily member 1", "gene_name": "ENOSF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVHGRVSRLSVHDVRFPTSLGGHGSDAMHTDPDYSAAYVVLETDAEDGLKGYGITFTLGRGTEVVVCAVNALAPHVLNKDLGEIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPLWKLLVDMDPRTLVSCIDFRYITDVLTEEEACEILRQSQVGKKEREEQMLAHGYPAYTTSCAWLGYPDATLKQLCSEALKDGWTRFKVKVGADLQDDIRRCRLVRNMIGPEKTLMMDANQRWDVPEAVEWMTKLAEFKPLWIEEPTSPDDILGHAAISKALAPLGIGVATGEQCHNRVIFKQLLQAKALKFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDFISVSASLQDRMCEYVDHLHEHFKYPVLIREAAYMPPKDAGYSTEMKEDSVKRHRYPDGEVWKKLLSAQGN", "length": 443 }, "evidence": [ { "id": "I3LC92", "url": "https://omabrowser.org/oma/group/I3LC92/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q7L5Y1-1", "protein_name": "Mitochondrial enolase superfamily member 1", "gene_name": "ENOSF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVRGRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVVVCAVNALAHHVLNKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN", "length": 443 }, "evidence": [ { "id": "I3LC92", "url": "https://omabrowser.org/oma/group/I3LC92/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "pmid": "" }, { "name": "L-fuconate dehydratase activity", "id": "GO:0050023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050023", "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "pmid": "" }, { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "pmid": "" }, { "name": "hydro-lyase activity", "id": "GO:0016836", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016836", "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "amino acid catabolic process", "id": "GO:0009063", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009063", "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "pmid": "" }, { "name": "carbohydrate catabolic process", "id": "GO:0016052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016052", "evidence": [ { "database": "UniProtKB", "id": "I3LC92", "url": "https://www.uniprot.org/uniprotkb/I3LC92" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 338, "end_pos": 340, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "22772", "name": "", "equation": "L-fuconate = 2-dehydro-3-deoxy-L-fuconate + H2O", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "22772", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/22772" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LC92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC92" }, { "id": "SM00922", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00922" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Mandelate racemase/muconate lactonizing enzyme C-terminal", "eco_id": "ECO_0000259", "start_pos": 201, "end_pos": 297, "start_aa": "Asp", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 338, "end_pos": 340 } ] }, "class_list": [], "section_stats": [ { "table_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LG03-1", "uniprot_ac": "I3LG03", "uniprot_id": "I3LG03_PIG", "mass": { "chemical_mass": 61214.0, "monoisotopic_mass": 61214.0 }, "refseq": { "ac": "XP_020919528", "name": "REST corepressor 3 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919528" }, "gene_names": [ { "name": "RCOR3", "type": "recommended", "evidence": [ { "id": "I3LG03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG03" } ] }, { "name": "RCOR3", "type": "synonym", "evidence": [ { "id": "XP_020919528", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919528" } ] } ], "protein_names": [ { "name": "REST corepressor 3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020919528", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919528" } ] }, { "name": "REST corepressor 3", "type": "synonym", "evidence": [ { "id": "I3LG03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG03/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May act as a component of a corepressor complex that represses transcription.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AWZ1", "url": "https://www.uniprot.org/uniprotkb/A0A287AWZ1#function" }, { "database": "UniProtKB", "id": "ARBA00037180", "url": "https://www.uniprot.org/uniprotkb/ARBA00037180#function" }, { "database": "UniProtKB", "id": "A0A287B7T4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7T4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LG03", "url": "https://www.uniprot.org/uniprotkb/I3LG03" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RCOR3", "url": "https://www.uniprot.org/uniprotkb/I3LG03", "locus": { "chromosome": "9", "start_pos": 131833399, "end_pos": 131890799, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028293", "url": "https://www.ensembl.org/id/ENSSSCG00000028293" } ] } } ], "crossref": [ { "id": "I3LG03", "url": "https://alphafold.ebi.ac.uk/entry/I3LG03", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028293", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028293", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00167", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00167", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623040", "url": "https://www.ncbi.nlm.nih.gov/gene/100623040", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000949", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000949", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001005", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001005", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017884", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017884", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051066", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051066", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR16089", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16089", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16089:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16089:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00249", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00249", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01448", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01448", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20878", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20878", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020919528", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919528", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AWZ1", "url": "https://www.uniprot.org/uniprotkb/A0A287AWZ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AWZ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AWZ1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7T4", "url": "https://www.uniprot.org/uniprotkb/A0A287B7T4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7T4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7T4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG03", "url": "https://www.uniprot.org/uniprotkb/I3LG03", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG03-1", "url": "https://www.uniprot.org/uniprotkb/I3LG03-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHFSEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNADQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPSAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSSLH", "length": 554, "header": "tr|I3LG03-1|I3LG03_PIG Isoform 1 of REST corepressor 3 OS=Sus scrofa OX=9823 GN=RCOR3 PE=3 SV=4 CANONICAL=I3LG03-1" }, "isoforms": [ { "isoform_ac": "A0A287AWZ1-1", "url": "https://www.uniprot.org/uniprotkb/I3LG03/entry#A0A287AWZ1-1", "sequence": { "sequence": "MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHFSEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNADQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPSAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPEAQTPQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSSLH", "length": 454, "header": "tr|A0A287AWZ1-1|A0A287AWZ1_PIG Computationally mapped isoform of REST corepressor 3 OS=Sus scrofa OX=9823 GN=RCOR3 PE=3 SV=1 CANONICAL=I3LG03-1" }, "locus": { "chromosome": "9", "start_pos": 131890606, "end_pos": 131836016, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061679.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061679.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048667.1", "url": "https://www.ensembl.org/id/ENSSSCP00000048667.1" } ] } }, { "isoform_ac": "A0A287B7T4-1", "url": "https://www.uniprot.org/uniprotkb/I3LG03/entry#A0A287B7T4-1", "sequence": { "sequence": "MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHFSEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNADQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPSAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGTDPTGSSDSGSITSCPIIHSNTNSPHCHSEPASTTSSSNTACCPCSSPAASSTPAAGPVHPAPANFKSASTTSHSPC", "length": 436, "header": "tr|A0A287B7T4-1|A0A287B7T4_PIG Computationally mapped isoform of REST corepressor 3 OS=Sus scrofa OX=9823 GN=RCOR3 PE=3 SV=1 CANONICAL=I3LG03-1" }, "locus": { "chromosome": "9", "start_pos": 131890606, "end_pos": 131836128, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050585.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050585.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052168.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052168.1" } ] } }, { "isoform_ac": "I3LG03-1", "url": "https://www.uniprot.org/uniprotkb/I3LG03/entry#I3LG03-1", "sequence": { "sequence": "MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHFSEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNADQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPSAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLSTVGGQQPPSLIGIQTDSQSSSLH", "length": 554, "header": "tr|I3LG03-1|I3LG03_PIG Isoform 1 of REST corepressor 3 OS=Sus scrofa OX=9823 GN=RCOR3 PE=3 SV=4 CANONICAL=I3LG03-1" }, "locus": { "chromosome": "9", "start_pos": 131890606, "end_pos": 131836016, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026117.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026117.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022996.4", "url": "https://www.ensembl.org/id/ENSSSCP00000022996.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 463, "start_aa": "Thr", "end_pos": 463, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr463", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LG03", "url": "https://www.uniprot.org/uniprotkb/I3LG03" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LG03", "url": "https://www.uniprot.org/uniprotkb/I3LG03" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LG03", "url": "https://www.uniprot.org/uniprotkb/I3LG03" } ], "pmid": "" }, { "name": "transcription regulator complex", "id": "GO:0005667", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005667", "evidence": [ { "database": "UniProtKB", "id": "I3LG03", "url": "https://www.uniprot.org/uniprotkb/I3LG03" } ], "pmid": "" }, { "name": "histone deacetylase complex", "id": "GO:0000118", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000118", "evidence": [ { "database": "UniProtKB", "id": "I3LG03", "url": "https://www.uniprot.org/uniprotkb/I3LG03" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": 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} ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGA9", "url": "https://www.uniprot.org/uniprotkb/I3LGA9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622488", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622488", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YVY2-1", "protein_name": "G kinase anchoring protein 1", "gene_name": "GKAP1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASVVMSSVPTTASRFALLQLESDTDSESGKGRSGQGAGKSQASEGRSSTNEKKREKRRRKKEQQQSEANELRNLAFKKIPQKSSHGGCLSQHEQKLHAAVQKDSQEENWQEWRQRDEQLTSEMFEADLEKALLLSKLEYEEHKKEYENMECIPPQSKSVNKKEKRKNQQGKDKPLTVSLKDFQSESNIDNVAKKHEEPISSQTSMNDGGFFHKLEDDVHKILEREKRRDQLTDCNEIDNCTSHEHNQESGMKDGKTEQLKFELEKKDAEIQQLKSIITQWEVKYKEVKARNAQLLKMLQEVKDKAEILLQVDELQIIKNELTLQVTTLHAALEQERSKVKLLQAELTKYQSGKRGKKHLESDQYR", "length": 366 }, "evidence": [ { "id": "I3LGA9", "url": "https://omabrowser.org/oma/group/I3LGA9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3IAS7-1", "protein_name": "G kinase-anchoring protein 1", "gene_name": "Gkap1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASAVLSSVLTTASRFALLQVDSGSGSDSEPGKGKGRNNGKSQTLGNKSTTNEKKREKRRKKKEQQQSEANELRNLAFKKIPQKSSHAICNVQQEQLPLPTPAQKESREENWQEWRQRDEQLTSEMFEADLEKALLLSKLEYEEHKQDYENAENASTQSKVINKKDKRKNQQGKDKPLTVSLKDFQCEDHTSKKTEESNSSQTLSHDGGFFNRLEDDVHKILIREKRRDQLTEYNGTDHCPAPEHNQEVGLKDGRIERLKLELERKDAEIQKLKAVITQWEAKYKEVKARNGQLLKMLQEGEMKDKAEILLQVDESQSIKNELTVQVSSLHAALEQERSKVKVLQAELAKYQSGRKGKRNPESDQCR", "length": 367 }, "evidence": [ { "id": "I3LGA9", "url": "https://omabrowser.org/oma/group/I3LGA9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q32LE2-1", "protein_name": "G kinase-anchoring protein 1", "gene_name": "GKAP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASAVLSSVPTTASRFALLQVDSGSGSDSEPGKGKGRNTGKSQTNKSTTNEKKREKRRKKKEQQQSEANELRNLAFKKIPQKSSHAICNAQHELSLPNPVQKDSREENWQEWRQRDEQLTSEMFEADLEKALLLSKLEYEEHKKEYENAENASTQSKVMNKKDKRKTHQGKDKPLTISLKEFQSEDHISKKTEELSSQILSHDGGFFNRLEDDVHKILTREKRREQLTEYNGTDNYTVHEHNQEVVLKDGRIERLKLELERKDAEIQKLKNVIAQWEAKYKEVKARNAQLLKMLQEGEMKDKAEILLQVDESQSIKNELTIQVTSLHAALEQERSKVKVLQAELAKYQGGRKGKRNSESDQCR", "length": 363 }, "evidence": [ { "id": "I3LGA9", "url": "https://omabrowser.org/oma/group/I3LGA9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5VSY0-1", "protein_name": "G kinase-anchoring protein 1", "gene_name": "GKAP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASAVLSSVPTTASRFALLQVDSGSGSDSEPGKGKGRNTGKSQTLGSKSTTNEKKREKRRKKKEQQQSEANELRNLAFKKIPQKSSHAVCNAQHDLPLSNPVQKDSREENWQEWRQRDEQLTSEMFEADLEKALLLSKLEYEEHKKEYEDAENTSTQSKVMNKKDKRKNHQGKDRPLTVSLKDFHSEDHISKKTEELSSSQTLSHDGGFFNRLEDDVHKILIREKRREQLTEYNGTDNCTAHEHNQEVVLKDGRIERLKLELERKDAEIQKLKNVITQWEAKYKEVKARNAQLLKMLQEGEMKDKAEILLQVDESQSIKNELTIQVTSLHAALEQERSKVKVLQAELAKYQGGRKGKRNSESDQCR", "length": 366 }, "evidence": [ { "id": "I3LGA9", "url": "https://omabrowser.org/oma/group/I3LGA9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5XIG5-1", "protein_name": "G kinase-anchoring protein 1", "gene_name": "Gkap1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASAVLSSVLTTASRFALLQVDSGSGSDSEPGKGKGRNNGKSQTLGNKSTANEKKREKRRKKKEQQQSEANELRNLAFKKIPQKSSHSVCNVQHELSLPNPVQKESREENWQEWRQRDEQLTSEMFEADLEKALLLSKLEYEEHRQDYENAENASTQTKVINKKDKRKNHQGKDKPLTVSLKDFQCEDHISKKTEESNSSQPLSHDGGFFNRLEDDVHKILVREKRREQLTEHNGTDNCPAPEHNQEVGLKDGRIERLKLELERKDAEIQKLKAVVTQWEAKYKEVKARNGQLLKMLQEGEMKDKAEILLQVDESQSIKNELTVQVSSLHAALEQERSKVKVLQAELAKYQGGRKGKRNCEPDQCR", "length": 366 }, "evidence": [ { "id": "I3LGA9", "url": "https://omabrowser.org/oma/group/I3LGA9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6NWC9-1", "protein_name": "G kinase-anchoring protein 1", "gene_name": "gkap1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MASAVISVPTTASRFALLQVDSDSDSDSDVGKPKAAGRGAGKPRSGKSPSGKNSQNNEKKKEKRRRKKEQQQSEANELRSLAFKKIPQKSTAPPSLTLQDLANDLINPANVQQGSKPQENWQEWKQRDEQLTSDLYEADLEKALMLSKLEFEEHKKDADKAETASPKTKTGGKKDRKKNQQGKDKRVTVSLKDFQQEDQLKNKPEREPVNPALRDDKFFNKLEDDVSKIVQRDKRREQYSNSAGQEVNTSSEHEQDVRTEQLKYELEKKDQEIAKLKKTISQWEERYKEVKARNSQLLKMLQQGEMKDKAEILLQVEELLNIKEELSSQVTQLHTALEQERSKVKGLQSEQPKHQGNRKGKKASEGDV", "length": 368 }, "evidence": [ { "id": "I3LGA9", "url": "https://omabrowser.org/oma/group/I3LGA9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9JMB0-1", "protein_name": "G kinase-anchoring protein 1", "gene_name": "Gkap1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASAVLSSVLTTASRFALLQVDSGSGSDSEPGKGKGRSNGKSQTLGNKATSNEKKREKRRKKKEQQQSEANELRNLAFKKIPQKSSHSICNVQHELSSPNPAQKESREENWQEWRQKDEQLTSEMFEADLEKALLLSKLEYEEHKQDYENAETASTQTKGINKKDKRKNHQGKDKPVTVSLKDFQCEDHISKKAEESNSAQTLSHDGGFFNRLEDDVHKILIREKRREQLTEHNGTDNSPAPEHNQEVGLKDGRIERLKLELERKDAEIQKLKAVITQWEAKYKEVKARNGQLLKMLQEGEMKDKAEILLQVDESQSIKNELTVQVSSLHAALEQERSKVKVLQAELAKYQGGRKGKRNFEPDHCR", "length": 366 }, "evidence": [ { "id": "I3LGA9", "url": "https://omabrowser.org/oma/group/I3LGA9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3LGA9", "url": "https://www.uniprot.org/uniprotkb/I3LGA9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": 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{ "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "I3LGA9", "url": "https://www.uniprot.org/uniprotkb/I3LGA9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 154, "end_pos": 156, "annotation": "n_glycosylation_sequon" }, { "start_pos": 235, "end_pos": 237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 239, "end_pos": 241, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 154, "end_pos": 156 }, { "start_pos": 235, "end_pos": 237 }, { "start_pos": 239, "end_pos": 241 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LLY2-1", "uniprot_ac": "I3LLY2", "uniprot_id": "I3LLY2_PIG", "mass": { "chemical_mass": 37638.0, "monoisotopic_mass": 37638.0 }, "refseq": { "ac": "XP_003354637", "name": "glycerophosphodiester phosphodiesterase 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354637" }, "gene_names": [ { "name": "GDE1", "type": "recommended", "evidence": [ { "id": "I3LLY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ] }, { "name": "GDE1", "type": "synonym", "evidence": [ { "id": "XP_003354637", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354637" } ] } ], "protein_names": [ { "name": "Glycerophosphodiester phosphodiesterase 1", "type": "recommended", "evidence": [ { "id": "I3LLY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLY2/entry#names_and_taxonomy" } ] }, { "name": "3.1.4.44", "type": "synonym", "evidence": [ { "id": "I3LLY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLY2/entry#names_and_taxonomy" } ] }, { "name": "Glycerophosphoinositol glycerophosphodiesterase GDE1", "type": "synonym", "evidence": [ { "id": "I3LLY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLY2/entry#names_and_taxonomy" } ] }, { "name": "Lysophospholipase D GDE1", "type": "synonym", "evidence": [ { "id": "I3LLY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLY2/entry#names_and_taxonomy" } ] }, { "name": "Membrane-interacting protein of RGS16", "type": "synonym", "evidence": [ { "id": "I3LLY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLY2/entry#names_and_taxonomy" } ] }, { "name": "glycerophosphodiester phosphodiesterase 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003354637", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354637" } ] } ], "function": [ { "annotation": "Hydrolyzes the phosphodiester bond of glycerophosphodiesters such as glycerophosphoinositol (GroPIns) and glycerophosphoethanolamine (GroPEth), to yield a glycerol phosphate and an alcohol. Hydrolyzes glycerophospho-N-acylethanolamines to N-acylethanolamines in the brain and participates in bioactive N-acylethanolamine biosynthesis such as anandamide (an endocannabinoid), N-palmitoylethanolamine (an anti-inflammatory), and N-oleoylethanolamine (an anorexic). In addition, has a lysophospholipase D activity by hydrolyzing N-acyl-lysoplasmenylethanolamine (N-acyl-lysoPlsEt) to N-acylethanolamine. However lysophospholipase D activity is lower than glycerophosphodiester phosphodiesterase activity. Has little or no activity towards glycerophosphocholine.", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2#function" }, { "database": "UniProtKB", "id": "ARBA00056558", "url": "https://www.uniprot.org/uniprotkb/ARBA00056558#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GDE1", "url": "https://www.uniprot.org/uniprotkb/I3LLY2", "locus": { "chromosome": "3", "start_pos": 26206191, "end_pos": 26190287, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029212", "url": "https://www.ensembl.org/id/ENSSSCG00000029212" } ] } } ], "crossref": [ { "id": "ENSSSCG00000029212", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029212", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08573", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08573", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624000", "url": "https://www.ncbi.nlm.nih.gov/gene/100624000", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR017946", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017946", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030395", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030395", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624000", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624000", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KHHWMTL", "url": "https://omabrowser.org/oma/group/KHHWMTL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LLY2", "url": "https://www.orthodb.org/?gene=I3LLY2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46320", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46320", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46320:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46320:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03009", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03009", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6814848", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6814848", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003354637", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354637", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "16501", "url": "https://www.rhea-db.org/rhea/16501", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "45428", "url": "https://www.rhea-db.org/rhea/45428", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "45432", "url": "https://www.rhea-db.org/rhea/45432", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "45436", "url": "https://www.rhea-db.org/rhea/45436", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "45440", "url": "https://www.rhea-db.org/rhea/45440", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "45444", "url": "https://www.rhea-db.org/rhea/45444", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "53184", "url": "https://www.rhea-db.org/rhea/53184", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "53188", "url": "https://www.rhea-db.org/rhea/53188", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "53192", "url": "https://www.rhea-db.org/rhea/53192", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B1W7", "url": "https://www.uniprot.org/uniprotkb/A0A287B1W7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B1W7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B1W7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLY2-1", "url": "https://www.uniprot.org/uniprotkb/I3LLY2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWVWEEQGGLMGPFSFLLLLLLLLTRSPFNACLFTGSLYLLLRLFSFEPVPSRRAVQVLKPRDRVSAIAHRGGSYDAPENTLAAIRQAAKNGAAGVELDIEFTSDGIPVLMHDNTVDRTTDGTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREAVAECLRHNLTVFFDVKGHANMATDALKKIYMEFPQLYNNSIVCSFLPEVIYKMRQADQNVLTALIHRPWSLSHTGDGKPRFDTFWKQSTFVALDILLDWSMHNILWYLCGISAFLIQKDFVSPAYLKKWSAKGIQVVAWTVNTFDEKSYYESHLGSSYITDSMLEDCSPQF", "length": 331, "header": "tr|I3LLY2-1|I3LLY2_PIG Isoform 1 of Glycerophosphodiester phosphodiesterase 1 OS=Sus scrofa OX=9823 GN=GDE1 PE=3 SV=1 CANONICAL=I3LLY2-1" }, "isoforms": [ { "isoform_ac": "A0A287B1W7-1", "url": "https://www.uniprot.org/uniprotkb/I3LLY2/entry#A0A287B1W7-1", "sequence": { "sequence": "MWVWEEQGGLMGPFSFLLLLLLLLTRSPFNACLFTGSLYLLLRLFSFEPVPSRRAVQVLKPRDRVSAIAHRGGSYDAPENTLAAIRQAAKNGAAGVELDIEFTSDGIPVLMHDNTVDRTTDGTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREAVAECLRHNLTVFFDVKGHANMMRQADQNVLTALIHRPWSLSHTGDGKPRFDTFWKQSTFVALDILLDWSMHNILWYLCGISAFLIQKDFVSPAYLKKWSAKGIQVVAWTVNTFDEKSYYESHLGSSYITDSMLEDCSPQF", "length": 300, "header": "tr|A0A287B1W7-1|A0A287B1W7_PIG Computationally mapped isoform of Glycerophosphodiester phosphodiesterase 1 OS=Sus scrofa OX=9823 GN=GDE1 PE=3 SV=1 CANONICAL=I3LLY2-1" }, "locus": { "chromosome": "3", "start_pos": 26205355, "end_pos": 26190424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051322.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051322.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050081.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050081.1" } ] } }, { "isoform_ac": "I3LLY2-1", "url": "https://www.uniprot.org/uniprotkb/I3LLY2/entry#I3LLY2-1", "sequence": { "sequence": "MWVWEEQGGLMGPFSFLLLLLLLLTRSPFNACLFTGSLYLLLRLFSFEPVPSRRAVQVLKPRDRVSAIAHRGGSYDAPENTLAAIRQAAKNGAAGVELDIEFTSDGIPVLMHDNTVDRTTDGTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREAVAECLRHNLTVFFDVKGHANMATDALKKIYMEFPQLYNNSIVCSFLPEVIYKMRQADQNVLTALIHRPWSLSHTGDGKPRFDTFWKQSTFVALDILLDWSMHNILWYLCGISAFLIQKDFVSPAYLKKWSAKGIQVVAWTVNTFDEKSYYESHLGSSYITDSMLEDCSPQF", "length": 331, "header": "tr|I3LLY2-1|I3LLY2_PIG Isoform 1 of Glycerophosphodiester phosphodiesterase 1 OS=Sus scrofa OX=9823 GN=GDE1 PE=3 SV=1 CANONICAL=I3LLY2-1" }, "locus": { "chromosome": "3", "start_pos": 26205355, "end_pos": 26190424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029900.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029900.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025102.1", "url": "https://www.ensembl.org/id/ENSSSCP00000025102.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624000", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624000", "resource": "KEGG Pathway" }, { "id": "R-SSC-6814848", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6814848", "resource": "Reactome", "description": "Glycerophospholipid catabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "G3ICV9-1", "protein_name": "Glycerophosphodiester phosphodiesterase 1", "gene_name": "Gde1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MWLWEDQGGLLGPFSFVLVVLLVMTRSPFNACVLTGSLYILLRLFSFEPVPSRRVLQVLKPRDRVSAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTADGVPVLMHDNTVDRTTDGSGRLCDLTFEQIRKLNPAANHRLRNEFPDEKIPTLKEAVTECLTHNLTIFFDVKGHADMASAALKNIYMEFPQLYNNSMVCSFLPEVIYKMRQMDQKVITALTHRPWSLSHTGDGKPRYSVFWKQSMFVVLDILLDWSMHNVLWYLCGISAFLMQKDFVSPDYLKKWSAKGIQVVSWTVNTFDEKNYYESHLGSSYITDSMLEDCAPHF", "length": 331 }, "evidence": [ { "id": "I3LLY2", "url": "https://omabrowser.org/oma/group/I3LLY2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3T0T0-1", "protein_name": "Glycerophosphodiester phosphodiesterase 1", "gene_name": "GDE1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MWLWEEQGGLMGPFSFLLLVLLLLTRSPFNACLFTGSLYLLLRLFSFEPVPSRRAMQVLKPRDRVSAIAHRGGSHDAPENTLAAIRQAAKNGAAGVELDLEFTADGIPVLMHDSTVDRTTDGTGRLCDLTFEQIRKLNPAANHRLRNDFPNEKIPTLREAVAECLNHNLTIFFDVKGHAYKATDALKKVYMEFPKLYNNSIVCSFLPEVIYKMRQTDQNVVTALIHRPWSLSHTGDGKPRFESFWKQSMFVALDILLDWSMHNILWYLCGVSAFLAQKDFISPDYVKKWSAKGIQVVAWTVNTFDEKSYYESHLGSSYITDSMLEDCTPEF", "length": 331 }, "evidence": [ { "id": "I3LLY2", "url": "https://omabrowser.org/oma/group/I3LLY2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9JL56-1", "protein_name": "Glycerophosphodiester phosphodiesterase 1", "gene_name": "Gde1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWLWEDQGGLLGPFSFVLVLLLVVTRSPFNACVLTGSLYILLRFFSFEPVPSRRALQVLKPRDRVSAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGVPVLMHDNTVDRTTDGSGRLCDLTFEQVRKLNPAANHRLRNEFPDERIPTLKEAVTECLRHNLTIFFDVKGHADMASAALKNIYTEFPQLYNNSMVCSFLPEVIYKMRQTDQKVITALTHRPWSLSHTGDGKPRYSVFWKQSVFVVLDILLDWSMHNVLWYLCGISAFLMQKDFVSPDYLKKWSAKGIQVVSWTVNTFDEKNYYESHLGSSYITDSMLEDCAPHF", "length": 331 }, "evidence": [ { "id": "I3LLY2", "url": "https://omabrowser.org/oma/group/I3LLY2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NZC3-1", "protein_name": "Glycerophosphodiester phosphodiesterase 1", "gene_name": "GDE1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWLWEDQGGLLGPFSFLLLVLLLVTRSPVNACLLTGSLFVLLRVFSFEPVPSCRALQVLKPRDRISAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGIPVLMHDNTVDRTTDGTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREAVAECLNHNLTIFFDVKGHAHKATEALKKMYMEFPQLYNNSVVCSFLPEVIYKMRQTDRDVITALTHRPWSLSHTGDGKPRYDTFWKHFIFVMMDILLDWSMHNILWYLCGISAFLMQKDFVSPAYLKKWSAKGIQVVGWTVNTFDEKSYYESHLGSSYITDSMVEDCEPHF", "length": 331 }, "evidence": [ { "id": "I3LLY2", "url": "https://omabrowser.org/oma/group/I3LLY2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "ethanolamine metabolic process", "id": "GO:0006580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006580", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "N-acylethanolamine metabolic process", "id": "GO:0070291", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070291", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "phospholipid metabolic process", "id": "GO:0006644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006644", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "phosphoric diester hydrolase activity", "id": "GO:0008081", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008081", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "phosphatidylcholine lysophospholipase activity", "id": "GO:0004622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004622", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "glycerophosphodiester phosphodiesterase activity", "id": "GO:0008889", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008889", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "glycerophosphoinositol glycerophosphodiesterase activity", "id": "GO:0047395", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047395", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" }, { "name": "cytoplasmic vesicle membrane", "id": "GO:0030659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030659", "evidence": [ { "database": "UniProtKB", "id": "I3LLY2", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 198, "end_pos": 200, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16501", "name": "", "equation": "sn-glycero-3-phospho-1D-myo-inositol + H2O = myo-inositol + sn-glycerol 3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16501", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16501" } ] }, { "id": "45428", "name": "", "equation": "N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + sn-glycerol 3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45428", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45428" } ] }, { "id": "45432", "name": "", "equation": "N-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + H2O = N-(9Z-octadecenoyl) ethanolamine + sn-glycerol 3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45432", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45432" } ] }, { "id": "45436", "name": "", "equation": "N-hexadecanoyl-sn-glycero-3-phosphoethanolamine + H2O = N-hexadecanoylethanolamine + sn-glycerol 3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45436", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45436" } ] }, { "id": "45440", "name": "", "equation": "N-eicosanoyl-sn-glycero-3-phosphoethanolamine + H2O = N-eicosanoyl ethanolamine + sn-glycerol 3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45440", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45440" } ] }, { "id": "45444", "name": "", "equation": "N-(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-sn-glycero-3-phosphoethanolamine + H2O = N-(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl ethanolamine + sn-glycerol 3-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "45444", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/45444" } ] }, { "id": "53184", "name": "", "equation": "1-O-(1Z-octadecenyl)-sn-glycero-3-phospho-N-hexadecanoyl-ethanolamine + H2O = 1-O-(1Z-octadecenyl)-sn-glycero-3-phosphate + N-hexadecanoylethanolamine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53184", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53184" } ] }, { "id": "53188", "name": "", "equation": "1-O-(1Z-octadecenyl)-sn-glycero-3-phospho-(N-9Z-octadecenoyl)-ethanolamine + H2O = 1-O-(1Z-octadecenyl)-sn-glycero-3-phosphate + N-(9Z-octadecenoyl) ethanolamine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53188", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53188" } ] }, { "id": "53192", "name": "", "equation": "1-O-(1Z-octadecenyl)-sn-glycero-3-phospho-(N-5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + H2O = 1-O-(1Z-octadecenyl)-sn-glycero-3-phosphate + N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53192", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53192" } ] }, { "id": "R-SSC-6813740", "name": "GDE1 hydrolyzes GroPIns", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [ "R-ALL-6813734" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6813740", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6813740" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-6813734", "participant_name": "GroPIns [cytosol]", "crossref": [ { "id": "58444", "database": "ChEBI", "url": "" }, { "id": "ZINC000100067589", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LLY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLY2" }, { "id": "PS51704", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51704" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GP-PDE", "eco_id": "ECO_0000259", "start_pos": 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Classification" ] }, { "id": "IPR044429", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044429", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050600", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050600", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622154", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622154", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ISHMKDE", "url": "https://omabrowser.org/oma/group/ISHMKDE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LLN1", "url": "https://www.orthodb.org/?gene=I3LLN1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13271", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13271", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13271:SF151", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13271:SF151", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00856", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00856", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09273", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09273", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003358991", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358991", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "51736", "url": "https://www.rhea-db.org/rhea/51736", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "60264", "url": "https://www.rhea-db.org/rhea/60264", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "60268", "url": "https://www.rhea-db.org/rhea/60268", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "60344", "url": "https://www.rhea-db.org/rhea/60344", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "60348", "url": "https://www.rhea-db.org/rhea/60348", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "61992", "url": "https://www.rhea-db.org/rhea/61992", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B6E5", "url": "https://www.uniprot.org/uniprotkb/A0A287B6E5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6E5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6E5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7V6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7V6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7V6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7V6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKKGGGRTSRIRRRKRFGKAESRGVNESYKPEFIELKKWLKDRNFEDTNLIPARFPGTGRGLMSKTSLQEGQLVIALPESCLLTTDTVLRSYLGPYIAKWQPPPSPLLALCTFLVSEKHAGDQSPWKPYLEVLPKTYTCPVCLEPEVVNLLPGPLKSKAREQRTRVWEFFSSSRDFFSSLQPLFPEAVESIFSYSALLWAWCTVNTRAVYMKQRPRQCFSTEPDTCALAPYLDLLNHSPAVQVKAAFNEESRCYEIRTGTSCRKHEEVFICYGPHGSHRLLLEYGFVSPRNPHACVYVPKDILVKYLPSTDKQMNKKISILKDHDFIENLTFGWDGPSWRLLTALKLLCLGAEDFTCWKKVLLGEVISDAHEKTSLDIAQKICHYFIEETNAMLQKISHMKDEDVALINQLTLVETLRTEELKILQASTEILAGLQTAFM", "length": 440, "header": "tr|I3LLN1-1|I3LLN1_PIG Isoform 1 of SET domain-containing protein 4 OS=Sus scrofa OX=9823 GN=SETD4 PE=3 SV=2 CANONICAL=I3LLN1-1" }, "isoforms": [ { "isoform_ac": "A0A287B6E5-1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1/entry#A0A287B6E5-1", "sequence": { "sequence": "MKKGGGRTSRIRRRKRFGKAESRGVNESYKPEFIELKKWLKDRNFEDTNLIPARFPGTGRGLMSKTSLQPPPSPLLALCTFLVSEKHAGDQSPWKPYLEVLPKTYTCPVCLEPEVVNLLPGPLKSKAREQRTRVWEFFSSSRDFFSSLQPLFPEAVESIFSYSALLWAWCTVNTRAVYMKQRPRQCFSTEPDTCALAPYLDLLNHSPAVQVKAAFNEESRCYEIRTGTSCRKHEEVFICYGPHGSHRLLLEYGFVSPRNPHACVYVPKDILVKYLPSTDKQMNKKISILKDHDFIENLTFGWDGPSWRLLTALKLLCLGAEDFTCWKKVLLGEVISDAHEKTSLDIAQKICHYFIEETNAMLQKISHMKDEDVALINQLTLVETLRTEELKILQASTEILAGLQTAFM", "length": 408, "header": "tr|A0A287B6E5-1|A0A287B6E5_PIG Computationally mapped isoform of SET domain-containing protein 4 OS=Sus scrofa OX=9823 GN=SETD4 PE=3 SV=1 CANONICAL=I3LLN1-1" }, "locus": { "chromosome": "13", "start_pos": 199586555, "end_pos": 199564175, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064143.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064143.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052086.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052086.2" } ] } }, { "isoform_ac": "A0A5G2R7V6-1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1/entry#A0A5G2R7V6-1", "sequence": { "sequence": "MKKGGGRTSRIRRRKRFGKAESRGGTGRGLMSKTSLQEGQLVIALPESCLLTTDTVLRSYLGPYIAKWQPPPSPLLALCTFLVSEKHAGDQSPWKPYLEVLPKTYTCPVCLEPEVVNLLPGPLKSKAREQRTRVWEFFSSSRDFFSSLQPLFPEAVESIFSYSALLWAWCTVNTRAVYMKQRPRQCFSTEPDTCALAPYLDLLNHSPAVQVKAAFNEESRCYEIRTGTSCRKHEEVFICYGPHGSHRLLLEYGFVSPRNPHACVYVPKDILVKYLPSTDKQMNKKISILKDHDFIENLTFGWDGPSWRLLTALKLLCLGAEDFTCWKKVLLGEVISDAHEKTSLDIAQKICHYFIEETNAMLQKISHMKDEDVALINQLTLVETLRTEELKILQASTEILAGLQTAFM", "length": 408, "header": "tr|A0A5G2R7V6-1|I3LLN1_PIG Computationally mapped isoform of SET domain-containing protein 4 OS=Sus scrofa OX=9823 GN=SETD4 PE=3 SV=2 CANONICAL=I3LLN1-1" }, "locus": { "chromosome": "13", "start_pos": 199586555, "end_pos": 199564175, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068831.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068831.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066686.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066686.2" } ] } }, { "isoform_ac": "I3LLN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1/entry#I3LLN1-1", "sequence": { "sequence": "MKKGGGRTSRIRRRKRFGKAESRGVNESYKPEFIELKKWLKDRNFEDTNLIPARFPGTGRGLMSKTSLQEGQLVIALPESCLLTTDTVLRSYLGPYIAKWQPPPSPLLALCTFLVSEKHAGDQSPWKPYLEVLPKTYTCPVCLEPEVVNLLPGPLKSKAREQRTRVWEFFSSSRDFFSSLQPLFPEAVESIFSYSALLWAWCTVNTRAVYMKQRPRQCFSTEPDTCALAPYLDLLNHSPAVQVKAAFNEESRCYEIRTGTSCRKHEEVFICYGPHGSHRLLLEYGFVSPRNPHACVYVPKDILVKYLPSTDKQMNKKISILKDHDFIENLTFGWDGPSWRLLTALKLLCLGAEDFTCWKKVLLGEVISDAHEKTSLDIAQKICHYFIEETNAMLQKISHMKDEDVALINQLTLVETLRTEELKILQASTEILAGLQTAFM", "length": 440, "header": "tr|I3LLN1-1|I3LLN1_PIG Isoform 1 of SET domain-containing protein 4 OS=Sus scrofa OX=9823 GN=SETD4 PE=3 SV=2 CANONICAL=I3LLN1-1" }, "locus": { "chromosome": "13", "start_pos": 199586555, "end_pos": 199564175, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026968.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026968.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025001.2", "url": "https://www.ensembl.org/id/ENSSSCP00000025001.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R7V6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7V6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622154", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622154", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YPK3-1", "protein_name": "SET domain-containing protein 4", "gene_name": "SETD4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKKSRGRTSRKRRRKRLQKFMYGVNCSHKLEYIKLKKWLKDRGFGDSSLRPAQFWGTGRGLMTTKALQAGELVISLPEKCLVTTTTVLNSCLGEYIMKWKPPVSPLIALCTFLIAEKHAGERSLWKPYLDVLPKTYSCPVCLEQDVVQLLPEPLRKQAQEQRTAVHELYMSSKAFFSSLQSLFAENTATIFNYSALEWAWCTINTRTIYMKHSQRECFSLEPDVYALAPYLDLLNHSPNVQVKAAFNEQSRNYEIQTNSQCKKHEEVFICYGPHDNQRLLLEYGFVAVDNPHSSVYVSSDTLLKYFPPLDKQKNAKLSILKDHDLLENLTFGWDGPSWRLLTALKVLSLGGDEFTCWRRALLGDVISARNEQQALNITTKICHFLIEETQHVLLQISQMKRDKENLKEQLTLVEALRLEDLKILQKSAEILCNLNVTTI", "length": 439 }, "evidence": [ { "id": "I3LLN1", "url": "https://omabrowser.org/oma/group/I3LLN1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1B906-1", "protein_name": "SET domain-containing protein 4", "gene_name": "SETD4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKNGGGRTSRIRRRKLFTSSESRGVNESYKPEFIELKKWLKDRRFEDTTLIPAHFPGTGRGLMSKTSLQEGQTIISLPESCLLTTDTVIRSYLGAYIAKWQPPPSPLLALCTFLVSEKHAGDRSPWKPYLEVLPKAYTCPVCLEPEVVNLLPNPLKTKAWEQRSHVWEFFSSSRGFFSSLQPLFSEAVETIFSYRALRWAWCAVNTRAVYMKRPPLLCLSPEPDTCALAPYLDLLNHSPDVQVKAAFNEETRCYEIRTATRCGKHKEVFICYGPHDNHRLLLEYGFVCVSNPHACVYVSKDILVKYLPSTAKQMNKKISILEDHDFTENLTFGWDGPSWRLLTALKLLCLEAEEFTCWKKVLLGEIISDTNEKASLDVAQKICHYFIEETHAVLRKVSRMKDEEVALMNQLTLVETLRTEELKILQASAKALTTLQTAFS", "length": 440 }, "evidence": [ { "id": "I3LLN1", "url": "https://omabrowser.org/oma/group/I3LLN1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P58467-1", "protein_name": "SET domain-containing protein 4", "gene_name": "Setd4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQRRRGRTERARKRRRRSSGSRAVNESYRSEFIELRKWLKERKFEDTDLVPASFPGTGRGLMSKASLQEGQVMISLPESCLLTTDTVIRSSLGPYIKKWKPPVSPLLALCTFLVSEKHAGCRSLWKSYLDILPKSYTCPVCLEPEVVDLLPSPLKAKAEEQRARVQDLFTSARGFFSTLQPLFAEPVDSVFSYRAFLWAWCTVNTRAVYLRSRRQECLSAEPDTCALAPFLDLLNHSPHVQVKAAFNEKTRCYEIRTASRCRKHQEVFICYGPHDNQRLLLEYGFVSVRNPHACVPVSADMLVKFLPAADKQLHRKITILKDHGFTGNLTFGWDGPSWRLLTALKLLCLEAERFTSWKKVLLGEVISDTNEKTSLGVAQKICSDVIEETHAVLRKVSDMKEGTVSLRSQLSLVEALRMEELRILQASAEILSGLLAPFS", "length": 439 }, "evidence": [ { "id": "I3LLN1", "url": "https://omabrowser.org/oma/group/I3LLN1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NVD3-1", "protein_name": "SET domain-containing protein 4", "gene_name": "SETD4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQKGKGRTSRIRRRKLCGSSESRGVNESHKSEFIELRKWLKARKFQDSNLAPACFPGTGRGLMSQTSLQEGQMIISLPESCLLTTDTVIRSYLGAYITKWKPPPSPLLALCTFLVSEKHAGHRSLWKPYLEILPKAYTCPVCLEPEVVNLLPKSLKAKAEEQRAHVQEFFASSRDFFSSLQPLFAEAVDSIFSYSALLWAWCTVNTRAVYLRPRQRECLSAEPDTCALAPYLDLLNHSPHVQVKAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQRLFLEYGFVSVHNPHACVYVSREILVKYLPSTDKQMDKKISILKDHGYIENLTFGWDGPSWRLLTALKLLCLEAEKFTCWKKVLLGEVISDTNEKTSLDIAQKICYYFIEETNAVLQKVSHMKDEKEALINQLTLVESLWTEELKILRASAETLHSLQTAFT", "length": 440 }, "evidence": [ { "id": "I3LLN1", "url": "https://omabrowser.org/oma/group/I3LLN1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "inflammatory response", "id": "GO:0006954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006954", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "positive regulation of interleukin-6 production", "id": "GO:0032755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032755", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "positive regulation of inflammatory response", "id": "GO:0050729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050729", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "positive regulation of tumor necrosis factor production", "id": "GO:0032760", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032760", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "regulation of cell proliferation in bone marrow", "id": "GO:0071863", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071863", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "histone H3K4 monomethyltransferase activity", "id": "GO:0140945", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140945", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "histone H3K4 methyltransferase activity", "id": "GO:0042800", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042800", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "histone H3K36 methyltransferase activity", "id": "GO:0046975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046975", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" }, { "name": "histone H4K20 methyltransferase activity", "id": "GO:0042799", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042799", "evidence": [ { "database": "UniProtKB", "id": "I3LLN1", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 236, "end_pos": 238, "annotation": "n_glycosylation_sequon" }, { "start_pos": 26, "end_pos": 28, "annotation": "n_glycosylation_sequon" }, { "start_pos": 329, "end_pos": 331, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "51736", "name": "", "equation": "L-lysyl-[protein] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl-[protein] + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "51736", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/51736" } ] }, { "id": "60264", "name": "", "equation": "L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "60264", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/60264" } ] }, { "id": "60268", "name": "", "equation": "N(6)-methyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(4)-[histone H3] + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "60268", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/60268" } ] }, { "id": "60344", "name": "", "equation": "L-lysyl(20)-[histone H4] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "60344", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/60344" } ] }, { "id": "60348", "name": "", "equation": "N(6)-methyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-methionine = N(6),N(6)-dimethyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "60348", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/60348" } ] }, { "id": "61992", "name": "", "equation": "N(6),N(6)-dimethyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-methionine = N(6),N(6),N(6)-trimethyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "61992", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/61992" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LLN1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 440, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LLN1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LLN1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LLN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLN1" }, { "id": "PS50280", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50280" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SET", "eco_id": "ECO_0000259", "start_pos": 48, "end_pos": 273, "start_aa": "Thr", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 236, "end_pos": 238 }, { "start_pos": 26, "end_pos": 28 }, { "start_pos": 329, "end_pos": 331 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"monoisotopic_mass": 183974.0 }, "refseq": {}, "gene_names": [ { "name": "SAMD9", "type": "recommended", "evidence": [ { "id": "I3LB61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LB61" } ] } ], "protein_names": [ { "name": "Sterile alpha motif domain containing 9", "type": "synonym", "evidence": [ { "id": "I3LB61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LB61/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LB61", "url": "https://www.uniprot.org/uniprotkb/I3LB61" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SAMD9", "url": "https://www.uniprot.org/uniprotkb/I3LB61", "locus": { "chromosome": "9", "start_pos": 72964869, "end_pos": 72999258, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027372", "url": "https://www.ensembl.org/id/ENSSSCG00000027372" } ] } } ], "crossref": [ { "id": "ENSSSCG00000027372", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027372", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519098", "url": "https://www.ncbi.nlm.nih.gov/gene/100519098", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001660", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001660", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519098", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519098", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LB61", "url": "https://www.orthodb.org/?gene=I3LB61", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16155", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16155", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16155:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16155:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07647", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07647", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B7Q2", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B7Q2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B7Q2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB61", "url": "https://www.uniprot.org/uniprotkb/I3LB61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB61-1", "url": "https://www.uniprot.org/uniprotkb/I3LB61-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAQLNLPKNTDDWTKEDVNRWLESHKIDQKHRDILTAQDVNGANLKYLTKEHLIDIGITFGPAIQIEHLFKELMETSTEDPSQICKREKGSKDVPKKQEKNRETSKQKQKDKETSDRVTDSTISTVTEGSMSLNNEFMEDEINDTQKKQSSVELMCVPYPFDEFSDPYRYKLNFSLQPETGPLNLIDPIHEFKAFTNTETATKEDVKMKFSNEVFRFASACMNSRTNGTIHFGVKDKPHGKIVGVEVTTVTKEAFIDHFNMMIHQYFEDHQVQKAKNCIREPRFVEVLLPNSIPSDRFVIEVDVVPKYSECEQEYFQIKMQNYSNKTWKQSPKFSVFMRDGASSKDVMKNNVEFKTFKLDLKKLAEARKEAEEKCRLKTNKKESEGPKLVKLLTGNKDLLDNSYYDWYILVINKCHPTQIKHLDFLKEIKWFAVLEFDPESVSEGVVKAYKESRVVNLHFPSLYVEGKTTNEKIISLNLYQQLSWIFCNGRLDLDSEKYKPLDPSSWQREKASEVRKLISFITHEDIMPRGKFLVVFLLLSSVDDPRDPLIETFCAFYQDLKGMENIMCICAHSRICQGWKDLLEARLAKQEDELSSQCISALSLEEINGTILKLKSVTQSSKRFLPSVGSSTVLLKREEDIMTALEILCENECEGTLLEKDEKKFLEFKALKEEDFYRGGKVSWWNFYFSSENYSSPFVKRERYEKLETMIQECAASSKPTCVKIIHLYHHPGCGGTTLAMHVLWELRKKFRCAVLKNKMVDFCEIGEQVTNLITYGTASSQEYLPVLLLVDDFEEQDNVYFLQASIQTTIANKYIRYEKPLVIILNCRRSQNPEKSAKNPNSIALIQNLSSKEQRAFELKLKKIEEQHKNFKDFYSFMIMKTNFDKKYIENVVRNILKGQNICTKEAKLFSFLALLNSYVPDTTISLSQCEKFLGITNKKAFWGTEKLEDKMGTYSTILIKTEVIECGNYCGVRIIHPLIATRSLEELKISYNLDKSQIILDMLTENLFYDTGIGKDKFLEDMQTLLLTRQRNDHEGETGTWFSPFIEALHRDEGNVAVKNVLLEGIRQFNSNAFICQALSRHFYIKERDFNSALHWANEAKKIEPDNSYISDTLGQVYKSKIRWWIEDGRNWNISADDLADLLDLAVHASNAFKESQRQSEDREYEVKERFYQKSKRRYDTYNIAGYQGEIEVGLYTIQILQLIPFFDNKNELSKRDMINFISGTTDIPGDPNNEFKLVLNNFIPYLTKLKFSLKKSFDFFDDYFVLLKPRNNIKQNEEAKTRKKVAVYFKKYADIFGPSEDSQSKYLGSKLSLPLQVEQCRRSLEVLKADKFSGLLEYLIKNQKDAASTMEDIMNKYSFLFEQCTVRMLSKEKQNFILANIILYCIKPTSKIVMPIKKLKEQLREVLQQAETICRQSEPYFLASLLFWPENQQLDQDSKQMEKYARSLENSFRGQYKHMCRTKQPIAYFFLGKGNNMNRLIHRGKIDQCCKKTAADIKSFWQSGDVWKEKEVQKLLFRLKGRAENNCLYIEYGINEKITIPITPAFLGQLRSGRSIDKVSFYLGFSTGGPLAYDIEVI", "length": 1583, "header": "tr|I3LB61-1|I3LB61_PIG Isoform 1 of Sterile alpha motif domain containing 9 OS=Sus scrofa OX=9823 GN=SAMD9 PE=4 SV=1 CANONICAL=I3LB61-1" }, "isoforms": [ { "isoform_ac": "A0A287B7Q2-1", "url": "https://www.uniprot.org/uniprotkb/I3LB61/entry#A0A287B7Q2-1", "sequence": { "sequence": 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"length": 1533, "header": "tr|A0A287B7Q2-1|A0A287B7Q2_PIG Computationally mapped isoform of Sterile alpha motif domain containing 9 OS=Sus scrofa OX=9823 GN=SAMD9 PE=4 SV=2 CANONICAL=I3LB61-1" }, "locus": { "chromosome": "9", "start_pos": 72969921, "end_pos": 72965323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041260.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041260.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052109.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052109.2" } ] } }, { "isoform_ac": "I3LB61-1", "url": "https://www.uniprot.org/uniprotkb/I3LB61/entry#I3LB61-1", "sequence": { "sequence": "MAAQLNLPKNTDDWTKEDVNRWLESHKIDQKHRDILTAQDVNGANLKYLTKEHLIDIGITFGPAIQIEHLFKELMETSTEDPSQICKREKGSKDVPKKQEKNRETSKQKQKDKETSDRVTDSTISTVTEGSMSLNNEFMEDEINDTQKKQSSVELMCVPYPFDEFSDPYRYKLNFSLQPETGPLNLIDPIHEFKAFTNTETATKEDVKMKFSNEVFRFASACMNSRTNGTIHFGVKDKPHGKIVGVEVTTVTKEAFIDHFNMMIHQYFEDHQVQKAKNCIREPRFVEVLLPNSIPSDRFVIEVDVVPKYSECEQEYFQIKMQNYSNKTWKQSPKFSVFMRDGASSKDVMKNNVEFKTFKLDLKKLAEARKEAEEKCRLKTNKKESEGPKLVKLLTGNKDLLDNSYYDWYILVINKCHPTQIKHLDFLKEIKWFAVLEFDPESVSEGVVKAYKESRVVNLHFPSLYVEGKTTNEKIISLNLYQQLSWIFCNGRLDLDSEKYKPLDPSSWQREKASEVRKLISFITHEDIMPRGKFLVVFLLLSSVDDPRDPLIETFCAFYQDLKGMENIMCICAHSRICQGWKDLLEARLAKQEDELSSQCISALSLEEINGTILKLKSVTQSSKRFLPSVGSSTVLLKREEDIMTALEILCENECEGTLLEKDEKKFLEFKALKEEDFYRGGKVSWWNFYFSSENYSSPFVKRERYEKLETMIQECAASSKPTCVKIIHLYHHPGCGGTTLAMHVLWELRKKFRCAVLKNKMVDFCEIGEQVTNLITYGTASSQEYLPVLLLVDDFEEQDNVYFLQASIQTTIANKYIRYEKPLVIILNCRRSQNPEKSAKNPNSIALIQNLSSKEQRAFELKLKKIEEQHKNFKDFYSFMIMKTNFDKKYIENVVRNILKGQNICTKEAKLFSFLALLNSYVPDTTISLSQCEKFLGITNKKAFWGTEKLEDKMGTYSTILIKTEVIECGNYCGVRIIHPLIATRSLEELKISYNLDKSQIILDMLTENLFYDTGIGKDKFLEDMQTLLLTRQRNDHEGETGTWFSPFIEALHRDEGNVAVKNVLLEGIRQFNSNAFICQALSRHFYIKERDFNSALHWANEAKKIEPDNSYISDTLGQVYKSKIRWWIEDGRNWNISADDLADLLDLAVHASNAFKESQRQSEDREYEVKERFYQKSKRRYDTYNIAGYQGEIEVGLYTIQILQLIPFFDNKNELSKRDMINFISGTTDIPGDPNNEFKLVLNNFIPYLTKLKFSLKKSFDFFDDYFVLLKPRNNIKQNEEAKTRKKVAVYFKKYADIFGPSEDSQSKYLGSKLSLPLQVEQCRRSLEVLKADKFSGLLEYLIKNQKDAASTMEDIMNKYSFLFEQCTVRMLSKEKQNFILANIILYCIKPTSKIVMPIKKLKEQLREVLQQAETICRQSEPYFLASLLFWPENQQLDQDSKQMEKYARSLENSFRGQYKHMCRTKQPIAYFFLGKGNNMNRLIHRGKIDQCCKKTAADIKSFWQSGDVWKEKEVQKLLFRLKGRAENNCLYIEYGINEKITIPITPAFLGQLRSGRSIDKVSFYLGFSTGGPLAYDIEVI", 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{ "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LKB5-1", "uniprot_ac": "I3LKB5", "uniprot_id": "I3LKB5_PIG", "mass": { "chemical_mass": 71781.0, "monoisotopic_mass": 71781.0 }, "refseq": { "ac": "XP_003126824", "name": "histone deacetylase 10 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126824" }, "gene_names": [ { "name": "HDAC10", "type": "recommended", "evidence": [ { "id": "I3LKB5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ] }, { "name": "HDAC10", "type": "synonym", "evidence": [ { "id": "XP_003126824", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126824" } ] } ], "protein_names": [ { "name": "Histone deacetylase 10", "type": "synonym", "evidence": [ { "id": "I3LKB5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKB5/entry#names_and_taxonomy" } ] }, { "name": "histone deacetylase 10 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003126824", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126824" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HDAC10", "url": "https://www.uniprot.org/uniprotkb/I3LKB5", "locus": { "chromosome": "5", "start_pos": 445334, "end_pos": 439808, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000971", "url": "https://www.ensembl.org/id/ENSSSCG00000000971" } ] } } ], "crossref": [ { "id": "I3LKB5", "url": "https://alphafold.ebi.ac.uk/entry/I3LKB5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000971", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000971", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518786", "url": "https://www.ncbi.nlm.nih.gov/gene/100518786", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000286", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000286", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023696", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023696", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023801", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023801", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037138", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037138", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518786", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518786", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MAMMCVV", "url": "https://omabrowser.org/oma/group/MAMMCVV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LDD6", "url": "https://www.orthodb.org/?gene=I3LDD6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LKB5", "url": "https://www.orthodb.org/?gene=I3LKB5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10625", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10625", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10625:SF43", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10625:SF43", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00850", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00850", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-350054", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-350054", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003126824", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126824", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B9U5", "url": "https://www.uniprot.org/uniprotkb/A0A287B9U5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9U5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9U5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBB1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBB1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBB1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RXT2", "url": "https://www.uniprot.org/uniprotkb/F1RXT2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RXT2-1", "url": "https://www.uniprot.org/uniprotkb/F1RXT2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDD6", "url": "https://www.uniprot.org/uniprotkb/I3LDD6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDD6-1", "url": "https://www.uniprot.org/uniprotkb/I3LDD6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKB5-1", "url": "https://www.uniprot.org/uniprotkb/I3LKB5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGTALVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQGVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALPAPLDGDLVLPHDVLCQEGSAPQEETQAWARPHEALAQDKALSALGRVLHLLDRILDGQVSSGIAATPGPAVAATLDVAIRCGLSHGAQRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEAAALSMFHVSVPLPRTTGGFLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDPQAALLAALLRGPAGGRVLALVDEESTPQLAVVLARVLHGEAPPSLGPFCMASLETMQALMHLRGQLEPQWKMLRVAAPP", "length": 671, "header": "tr|I3LKB5-1|I3LKB5_PIG Isoform 1 of Histone deacetylase 10 OS=Sus scrofa OX=9823 GN=HDAC10 PE=1 SV=2 CANONICAL=I3LKB5-1" }, "isoforms": [ { "isoform_ac": "A0A287B9U5-1", "url": "https://www.uniprot.org/uniprotkb/I3LKB5/entry#A0A287B9U5-1", "sequence": { "sequence": "MGTALVYHEDMTAARLLWDDPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLPFPSWAWLLLAVPRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQGVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALPAPLDGDLVLPHDVLCQEGSAPQEETQAWARPHEALAQDKALSALGRVLHLLDRILDGQVSSGIAATPGPAVAATLDVAIRCGLSHGAQRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEAAALSMFHVSVPLPRTTGGFLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDPQAALLAALLRGPAGGRVLALVDEESTPQLAVVLARVLHGEAPPSLGPFCMASLETMQALMHLRGQLEPQWKMLRVAGETGRPGSA", "length": 644, "header": "tr|A0A287B9U5-1|A0A287B9U5_PIG Computationally mapped isoform of Histone deacetylase 10 OS=Sus scrofa OX=9823 GN=HDAC10 PE=1 SV=3 CANONICAL=I3LKB5-1" }, "locus": { "chromosome": "5", "start_pos": 444912, "end_pos": 440051, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054587.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054587.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053268.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053268.3" } ] } }, { "isoform_ac": "A0A5G2RBB1-1", "url": "https://www.uniprot.org/uniprotkb/I3LKB5/entry#A0A5G2RBB1-1", "sequence": { "sequence": "MGTALVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQGVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALPAPLDGDLVLPHDVLCQEGSAPQEETQAWARPHEALAQDKALSALGRVLHLLDRILDGQVSSGIAATPGPAVAATLDVAIRCGLSHGAQRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEAAALSMFHVSVPLPRTTGGFLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDPQAALLAALLRGPAGGRVLALVDEESTPQLAVVLARVLHGEAPPSLGPFCMASLETMQALMHLRGQLEPQWKMLRVAGETGRPGSA", "length": 654, "header": "tr|A0A5G2RBB1-1|I3LKB5_PIG Computationally mapped isoform of Histone deacetylase 10 OS=Sus scrofa OX=9823 GN=HDAC10 PE=1 SV=2 CANONICAL=I3LKB5-1" }, "locus": { "chromosome": "5", "start_pos": 444912, "end_pos": 440051, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081871.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081871.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067893.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067893.2" } ] } }, { "isoform_ac": "F1RXT2-1", "url": "https://www.uniprot.org/uniprotkb/I3LKB5/entry#F1RXT2-1", "sequence": { "sequence": "MGTALVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQGVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALPAPLDGDLVLPHDVLCQEGSAPQEETQAWARPHEALAQDKALSALGRVLHLLDRILDGQVSSGIAATPGPAVAATLDVAIRCGLSHGAQRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEAAALSMFHVSVPLPRVSGGVPGQGSCCSLASP", "length": 571, "header": "tr|F1RXT2-1|F1RXT2_PIG Computationally mapped isoform of Histone deacetylase 10 OS=Sus scrofa OX=9823 GN=HDAC10 PE=1 SV=3 CANONICAL=I3LKB5-1" }, "locus": { "chromosome": "5", "start_pos": 444311, "end_pos": 440051, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001061.4", "url": "https://www.ensembl.org/id/ENSSSCT00000001061.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001039.3", "url": "https://www.ensembl.org/id/ENSSSCP00000001039.3" } ] } }, { "isoform_ac": "I3LDD6-1", "url": "https://www.uniprot.org/uniprotkb/I3LKB5/entry#I3LDD6-1", "sequence": { "sequence": "MGTALVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQGVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALPAPLDGDLVLPHDVLCQEGSAPQEETQAWARPHEALAQDKALSALGRVLHLLDRILDGQVSSGIAATPGPAVAATLDVAIRCGLSHGAQRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEAAALSMFHVSVPLPRTTGGFLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDPQAALLAALLRGPAGGRVLALVDEESTPQLAVVLARVLHGEAPPSLGPFCMASLETMQALMHLRGQLEPQWKMLRVAGETGRPGSA", "length": 647, "header": "tr|I3LDD6-1|I3LKB5_PIG Computationally mapped isoform of Histone deacetylase 10 OS=Sus scrofa OX=9823 GN=HDAC10 PE=1 SV=2 CANONICAL=I3LKB5-1" }, "locus": { "chromosome": "5", "start_pos": 444912, "end_pos": 440051, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029634.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029634.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022067.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022067.2" } ] } }, { "isoform_ac": "I3LKB5-1", "url": "https://www.uniprot.org/uniprotkb/I3LKB5/entry#I3LKB5-1", "sequence": { "sequence": "MGTALVYHEDMTAARLLWDDPECEIERPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQSVRAAQAPHWMSLRQQGVAPVLSSSTRSPGQGPSPPMPAGPEFKTAAAQAVAALSSLLDQLRLRPTPPVRTALALPAPLDGDLVLPHDVLCQEGSAPQEETQAWARPHEALAQDKALSALGRVLHLLDRILDGQVSSGIAATPGPAVAATLDVAIRCGLSHGAQRLLCVAVGQLDRPPHLTDDGGTLWLNVGGKEAAALSMFHVSVPLPRTTGGFLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDPQAALLAALLRGPAGGRVLALVDEESTPQLAVVLARVLHGEAPPSLGPFCMASLETMQALMHLRGQLEPQWKMLRVAAPP", "length": 671, "header": "tr|I3LKB5-1|I3LKB5_PIG Isoform 1 of Histone deacetylase 10 OS=Sus scrofa OX=9823 GN=HDAC10 PE=1 SV=2 CANONICAL=I3LKB5-1" }, "locus": { "chromosome": "5", "start_pos": 445046, "end_pos": 440051, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030674.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030674.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024529.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024529.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 486, "start_aa": "Thr", "end_pos": 486, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr486", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDD6", "url": "https://www.uniprot.org/uniprotkb/I3LDD6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518786", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518786", "resource": "KEGG Pathway" }, { "id": "R-SSC-350054", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-350054", "resource": "Reactome", "description": "Notch-HLH transcription pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XBW3-1", "protein_name": "Histone deacetylase 10", "gene_name": "HDAC10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASGTALIYDEAMTRHKLLWNDPICDIEVPERLSASYEQLQCYHLVERCVPVPAREGSEEEILLVHSSEHLEAAKSTQTMNEEELKRISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKLCVILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGEMAPCLSAIESIQNVRAAHKPYWKWLTYEDTSFLHNLSTRSDLPKTADTNPCADDEAKITDSNETDKIERFLELHMKNVIFPVPPIRTATTAELKASAHLNTFPVHLHVVKEMDKNEIEALVSDFHADLVKTNKTLLSLRSTLTILDKILKKEVCNGIAESPAASASVAVALRHPLCFGLQRVLCIFVGDMHIIPNTEDGKILVIHICKEEQTGKSSSKHYIVLNWKEDADGNDFFSAVLGFILPVAYSYQPNLIVIAVGPNRSLGISGISLLFGLLQGLAESRILAVIEDTDINLMQSVAKTLAGASVPHFGVHVPPTQEKVNQIKMLRNQLQQDWKMLQCSVNDGI", "length": 681 }, "evidence": [ { "id": "I3LKB5", "url": "https://omabrowser.org/oma/group/I3LKB5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1QCV2-1", "protein_name": "Polyamine deacetylase HDAC10", "gene_name": "hdac10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MASGSALIFDEEMSRYKLLWTDPACEIEVPERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLAHSEEYLEAVKQTPGMNVEELMAFSKKYNDVYFHQNIYHCAKLAAGATLQLVDSVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLLMPLAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQNVRNVQSSYWSSFKHLAQSETNPKRPRLDATNGGPKESSEPASESNPKKTAQDIVWPEPLKRMPASVRTVVVPPPGVELTLPKNCQHSGDISESTAKEVQRIRDKHFHDLTDQNILRSLGNIISVLDRMMRSDEVCNGCVVVSDLSVSVQCALQHALTEPAERVLVVYVGDGELPVKTNDGKVFLVQICTKETEDKCVNRLSLCLREGESLTAGFMQALLGLILPVAYEFNPALVLGIVGETAAKTGLMTVWGHMTCLIQGLARGRTLTLLQGYDKDLLELTVSALSGASISPLGPLRALKPEDVEMMEKQRQRLQERWGLLRCTVSES", "length": 675 }, "evidence": [ { "id": "I3LKB5", "url": "https://omabrowser.org/oma/group/I3LKB5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q569C4-1", "protein_name": "Polyamine deacetylase HDAC10", "gene_name": "Hdac10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCQCLSVCEASEEELGLVHSPEYIALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTGAVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRICAVLECPGVYPECSDSPDPSLDKPPTNSTCTVAEDSLSPCLDRPCHRPTPPICIAVALAVSGAALDLPPGVLHQEGSALREETEAWARLHKSQFQDDDLAALGKSLCLLDGILDGQIRSAIATTTALATAATLGVLIQRCVAHRGQRRILWLSIRGKEADIWSMFHFSTPLPQTTGGFLSFILGLVLPLAYGFQPDMVLMALGPAHGLQNAQAALLAAMLRSPVGGRILALVEEESILQLARTLAQVLHGETPPSLGPFSMASPEEIQALMFLKAQLEPRWKLLQVAAPPP", "length": 588 }, "evidence": [ { "id": "I3LKB5", "url": "https://omabrowser.org/oma/group/I3LKB5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6P3E7-1", "protein_name": "Polyamine deacetylase HDAC10", "gene_name": "Hdac10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGTALVYHEDMTATRLLWDDPECEIECPERLTAALDGLRQRGLEERCLCLSACEASEEELGLVHSPEYIALVQKTQTLDKEELHALSKQYNAVYFHPDTFHCARLAAGAALQLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQTPYWTSLQQNVAPVLSSSTHSPEERSLRLLGESPTCAVAEDSLSPLLDQLCLRPAPPICTAVASTVPGAALCLPPGVLHQEGSVLREETEAWARLHKSRFQDEDLATLGKILCLLDGIMDGQIRNAIATTTALATAATLDVLIQRCLARRAQRVLCVALGQLDRPLDLADDGRILWLNIRGKDAAIQSMFHFSTPLPQTTGGFLSLILGLVLPLAYGFQPDMVLMALGPAHGLQNAQAALLAAMLRSPVGGRILAVVEEESIRLLARSLAQALHGETPPSLGPFSKATPEEIQALMFLKARLEARWKLLQVAAPPP", "length": 666 }, "evidence": [ { "id": "I3LKB5", "url": "https://omabrowser.org/oma/group/I3LKB5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q969S8-1", "protein_name": "Polyamine deacetylase HDAC10", "gene_name": "HDAC10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGTALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQQQDVTAVPMSPSSHSPEGRPPPLLPGGPVCKAAASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLPPDVIQQEASALREETEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIAATPASAAAATLDVAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLNIRGKEAAALSMFHVSTPLPVMTGGFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGPHAALLAAMLRGLAGGRVLALLEENSTPQLAGILARVLNGEAPPSLGPSSVASPEDVQALMYLRGQLEPQWKMLQCHPHLVA", "length": 669 }, "evidence": [ { "id": "I3LKB5", "url": "https://omabrowser.org/oma/group/I3LKB5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "histone deacetylase complex", "id": "GO:0000118", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000118", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "histone deacetylase binding", "id": "GO:0042826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042826", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "deacetylase activity", "id": "GO:0019213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019213", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "histone deacetylase activity", "id": "GO:0004407", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004407", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "positive regulation of mismatch repair", "id": "GO:0032425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032425", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "macroautophagy", "id": "GO:0016236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016236", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "homologous recombination", "id": "GO:0035825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035825", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" }, { "name": "spermidine deacetylation", "id": "GO:0106048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106048", "evidence": [ { "database": "UniProtKB", "id": "I3LKB5", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LKB5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 671, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LKB5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LKB5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LKB5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKB5" }, { "id": "PF00850", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00850" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Histone deacetylase", "eco_id": "ECO_0000259", "start_pos": 25, "end_pos": 321, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 486 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10194:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00616", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00616", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00779", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00779", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5658442", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5658442", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BB88", "url": "https://www.uniprot.org/uniprotkb/A0A287BB88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BB88-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BB88-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDX0", "url": "https://www.uniprot.org/uniprotkb/A0A287BDX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDX0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDX0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BT22", "url": "https://www.uniprot.org/uniprotkb/A0A287BT22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BT22-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BT22-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAT0-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKRSSLSIRIVEGKNLPAKDITGSSDPYCIVKVDNEPIIRTATVWKTLCPFWGEEYQVHLPPTFHSVAFYVMDEDALSRDDVIGKVCLTRDTLASHPKGFSGWAHLMEVDPDEEVQGEIHLRLEVVSGTRGCRLRCSVLEARDLAPKDRNGASDPFVRVRYKGRTHETSIVKKSCYPRWNETFEFELEEGAAEALCVEAWDWDLVSRNDFLGKVVVNVQRLRAAQQEEGWFRLQPDQSKSRQRGEGNLGSLQLEVRLRDEMVLPSGCYQPLVQLLCREVKLGTQGPGQLIPLIEETTSTECRQDVASTLLRLFLGQGLAKDFLDLLFQLELGRTSEANTLFRSNSLASKSMESFLKVAGMRYLHGVLGPIIDRVFEEKKYVELDPSKVEVKDVGCSGLHRPQTEAEVLEQSAQTLRAHLGALLSALSRSVRSCPAVVRATFRQLFRRVRERFPSAQDENVPFIAVTSFLCLRFISPAIMAPKLFHLRERHADARTSRTLLLLAKAVQNVGNMDTPASRAKEAWMEPLQPTVRQGVAQLKDFIAKLVDIQEKEELDLQRSLSLQAPPVKEGPLFIHRTKGKGPLMSSFKKLHFSLTTEALSFAKTPSSKVPWTKPGYLAGLPHPTLGHFLFLGREFCPPVCTSKSTLIKLSSIRAVEKVEEKSFGSSHVLQVLYTDDSGRLQTAYLQGKCVNELNQWLSALRKVSIHNTGLLGSYHPGIFRGDKWSCCHQRDKTDLGCDKTRPRVTLQEWNDPLDHDLEAQLIYRHLLGVEAELWEKHRQLLAGPGAGPMPTGPGEAPQDPLAQLLQVLQDLKEAHRSSPAGSPSSEPSHLLELQT", "length": 836, "header": "tr|I3LAT0-1|I3LAT0_PIG Isoform 1 of Ras GTPase-activating protein 4B OS=Sus scrofa OX=9823 GN=RASA4B PE=4 SV=3 CANONICAL=I3LAT0-1" }, "isoforms": [ { "isoform_ac": "A0A287BB88-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT0/entry#A0A287BB88-1", "sequence": { "sequence": "MAKRSSLSIRIVEGKNLPAKDITGSSDPYCIVKVDNEPIIRTATVWKTLCPFWGEEYQVHLPPTFHSVAFYVMDEDALSRDDVIGKVCLTRDTLASHPKGFSGWAHLMEVDPDEEVQGEIHLRLEVVSGTRGCRLRCSVLEARDLAPKDRNGASDPFVRVRYKGRTHETSIVKKSCYPRWNETFEFELEEGAAEALCVEAWDWDLVSRNDFLGKVVVNVQRLRAAQQEEGWFRLQPDQSKSRQRGEGNLGSLQLEVRLRDEMVLPSGCYQPLVQLLCREVKLGTQGPGQLIPLIEETTSTECRQDVASTLLRLFLGQGLAKDFLDLLFQLELGRTSEANTLFRSNSLASKSMESFLKVAGMRYLHGVLGPIIDRVFEEKKYVELDPSKVEVKDVGCSGLHRPQTEAEVLEQSAQTLRAHLGALLSALSRSVRSCPAVVRATFRQLFRRVRERFPSAQDENVPFIAVTSFLCLRFISPAIMAPKLFHLRERHADARTSRTLLLLAKAVQNVGNMDTPASRAKEAWMEPLQPTVRQGVAQLKDFIAKLVDIQEKEGPRARALLCPPSRSSTSPSPRRPSALPRHPAPRKALSSSSPASGQWKRWRRRVLAAPTSCRSCTRTTRAGCRPPTCRASVWTGASPWLEASHRLFAGNRISEHCVNELNQWLSALRKVSIHNTGLLGSYHPGIFRGDKWSCCHQRDKTDLGCDKTRPRVTLQEWNDPLDHDLEAQLIYRHLLGVEAELWEKHRQLLAGPGAGPMPTGPGEAPQDPLAQLLQVLQDLKEAHRSSPAGSPSSEPSHLLELQT", "length": 803, "header": "tr|A0A287BB88-1|A0A287BB88_PIG Computationally mapped isoform of Ras GTPase-activating protein 4B OS=Sus scrofa OX=9823 GN=RASA4B PE=4 SV=2 CANONICAL=I3LAT0-1" }, "locus": { "chromosome": "3", "start_pos": 9846161, "end_pos": 9821771, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058050.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058050.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053804.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053804.2" } ] } }, { "isoform_ac": "A0A287BDX0-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT0/entry#A0A287BDX0-1", "sequence": { "sequence": "MAKRSSLSIRIVEGKNLPAKDITGSSDPYCIVKVDNEPIIRWQELTVLSCRTATVWKTLCPFWGEEYQVHLPPTFHSVAFYVMDEDALSRDDVIGKVCLTRDTLASHPKGFSGWAHLMEVDPDEEVQGEIHLRLEVVSGTRGCRLRCSVLEARDLAPKDRNGASDPFVRVRYKGRTHETSIVKKSCYPRWNETFEFELEEGAAEALCVEAWDWDLVSRNDFLGKVVVNVQRLRAAQQEEGWFRLQPDQSKSRQRGEGNLGSLQLEVRLRDEMVLPSGCYQPLVQLLCREVKLGTQGPGQLIPLIEETTSTECRQDVASTLLRLFLGQGLAKDFLDLLFQLELGRTSEANTLFRSNSLASKSMESFLKVAGMRYLHGVLGPIIDRVFEEKKYVELDPSKVEVKDVGCSGLHRPQTEAEVLEQSAQTLRAHLGALLSALSRSVRSCPAVVRATFRQLFRRVRERFPSAQDENVPFIAVTSFLCLRFISPAIMAPKLFHLRERHADARTSRTLLLLAKAVQNVGNMDTPASRAKEAWMEPLQPTVRQGVAQLKDFIAKLVDIQEKEELDLQRSLSLQAPPVKEGPLFIHRTKGKGPLMSSFKKLHFSLTTEALSFAKTPSSKKSTLIKLSSIRAVEKVEEKSFGSSHVLQVLYTDDSGRLQTAYLQGKCVNELNQWLSALRKVSIHNTGLLGSYHPGIFRGDKWSCCHQRDKTDLGCDKTRPRVTLQEWNDPLDHDLEAQLIYRHLLGVEAELWEKHRQLLAGPGAGPMPTGPGEAPQDPLAQLLQVLQDLKEAHRSSPAGSPSSEPSHLLELQT", "length": 812, "header": "tr|A0A287BDX0-1|A0A287BDX0_PIG Computationally mapped isoform of Ras GTPase-activating protein 4B OS=Sus scrofa OX=9823 GN=RASA4B PE=4 SV=2 CANONICAL=I3LAT0-1" }, "locus": { "chromosome": "3", "start_pos": 9846161, "end_pos": 9821771, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048257.2", "url": "https://www.ensembl.org/id/ENSSSCT00000048257.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054739.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054739.2" } ] } }, { "isoform_ac": "A0A287BT22-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT0/entry#A0A287BT22-1", "sequence": { "sequence": "MDEDALSRDDVIGKVCLTRDTLASHPKGFSGWAHLMEVDPDEEVQGEIHLRLEVVSGTRGCRLRCSVLEARDLAPKDRNGASDPFVRVRYKGRTHETSIVKKSCYPRWNETFEFELEEGAAEALCVEAWDWDLVSRNDFLGKVVVNVQRLRAAQQEEGWFRLQPDQSKSRQRGEGNLGSLQLEVRLRDEMVLPSGCYQPLVQLLCREVKLGTQGPGQLIPLIEETTSTECRQDVASTLLRLFLGQGLAKDFLDLLFQLELGRTSEANTLFRSNSLASKSMESFLKVAGMRYLHGVLGPIIDRVFEEKKYVELDPSKVEVKDVGCSGLHRPQTEAEVLEQSAQTLRAHLGALLSALSRSVRSCPAVVRATFRQLFRRVRERFPSAQDENVPFIAVTSFLCLRFISPAIMAPKLFHLRERHADARTSRTLLLLAKAVQNVGNMDTPASRAKEAWMEPLQPTVRQGVAQLKDFIAKLVDIQEKEELDLQRSLSLQAPPVKEGPLFIHRTKGKGPLMSSFKKLHFSLTTEALSFAKTPSSKKSTLIKLSSIRAVEKVEEKSFGSSHVLQVLYTDDSGRLQTAYLQGKCVNELNQWLSALRKVSIHNTGLLGSYHPGIFRGDKWSCCHQRDKTDLGCDKTRPRVTLQEWNDPLDHDLEAQLIYRHLLGVEAELWEKHRQLLAGPGAGPMPTGPGEAPQDPLAQLLQVLQDLKEAHRSSPAGSPSSEPSHLLELQT", "length": 730, "header": "tr|A0A287BT22-1|A0A287BT22_PIG Computationally mapped isoform of Ras GTPase-activating protein 4B OS=Sus scrofa OX=9823 GN=RASA4B PE=4 SV=2 CANONICAL=I3LAT0-1" }, "locus": { "chromosome": "3", "start_pos": 9839543, "end_pos": 9821771, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066004.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066004.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059352.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059352.2" } ] } }, { "isoform_ac": "I3LAT0-1", "url": "https://www.uniprot.org/uniprotkb/I3LAT0/entry#I3LAT0-1", "sequence": { "sequence": "MAKRSSLSIRIVEGKNLPAKDITGSSDPYCIVKVDNEPIIRTATVWKTLCPFWGEEYQVHLPPTFHSVAFYVMDEDALSRDDVIGKVCLTRDTLASHPKGFSGWAHLMEVDPDEEVQGEIHLRLEVVSGTRGCRLRCSVLEARDLAPKDRNGASDPFVRVRYKGRTHETSIVKKSCYPRWNETFEFELEEGAAEALCVEAWDWDLVSRNDFLGKVVVNVQRLRAAQQEEGWFRLQPDQSKSRQRGEGNLGSLQLEVRLRDEMVLPSGCYQPLVQLLCREVKLGTQGPGQLIPLIEETTSTECRQDVASTLLRLFLGQGLAKDFLDLLFQLELGRTSEANTLFRSNSLASKSMESFLKVAGMRYLHGVLGPIIDRVFEEKKYVELDPSKVEVKDVGCSGLHRPQTEAEVLEQSAQTLRAHLGALLSALSRSVRSCPAVVRATFRQLFRRVRERFPSAQDENVPFIAVTSFLCLRFISPAIMAPKLFHLRERHADARTSRTLLLLAKAVQNVGNMDTPASRAKEAWMEPLQPTVRQGVAQLKDFIAKLVDIQEKEELDLQRSLSLQAPPVKEGPLFIHRTKGKGPLMSSFKKLHFSLTTEALSFAKTPSSKVPWTKPGYLAGLPHPTLGHFLFLGREFCPPVCTSKSTLIKLSSIRAVEKVEEKSFGSSHVLQVLYTDDSGRLQTAYLQGKCVNELNQWLSALRKVSIHNTGLLGSYHPGIFRGDKWSCCHQRDKTDLGCDKTRPRVTLQEWNDPLDHDLEAQLIYRHLLGVEAELWEKHRQLLAGPGAGPMPTGPGEAPQDPLAQLLQVLQDLKEAHRSSPAGSPSSEPSHLLELQT", "length": 836, "header": "tr|I3LAT0-1|I3LAT0_PIG Isoform 1 of Ras GTPase-activating protein 4B OS=Sus scrofa OX=9823 GN=RASA4B PE=4 SV=3 CANONICAL=I3LAT0-1" }, "locus": { "chromosome": "3", "start_pos": 9846161, "end_pos": 9821771, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024358.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024358.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021148.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021148.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5658442", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5658442", "resource": "Reactome", "description": "Regulation of RAS by GAPs" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" }, { "name": "phospholipid binding", "id": "GO:0005543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005543", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" }, { "name": "regulation of intracellular signal transduction", "id": "GO:1902531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902531", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" }, { "name": "negative regulation of Ras protein signal transduction", "id": "GO:0046580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046580", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" }, { "name": "cellular response to calcium ion", "id": "GO:0071277", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071277", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LAT0", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 181, "end_pos": 183, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LAT0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 836, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LAT0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LAT0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LAT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 105, "start_aa": "Met", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LAT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 566, "end_pos": 706, "start_aa": "Pro", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LAT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT0" }, { "id": "PS50018", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50018" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ras-GAP", "eco_id": "ECO_0000259", "start_pos": 302, "end_pos": 512, "start_aa": "Cys", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 181, "end_pos": 183 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", 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"uniprot_canonical_ac": "I3LCW6-1", "uniprot_ac": "I3LCW6", "uniprot_id": "I3LCW6_PIG", "mass": { "chemical_mass": 136192.0, "monoisotopic_mass": 136192.0 }, "refseq": {}, "gene_names": [ { "name": "BRD8", "type": "recommended", "evidence": [ { "id": "I3LCW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ] } ], "protein_names": [ { "name": "Bromodomain-containing protein 8", "type": "recommended", "evidence": [ { "id": "I3LCW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCW6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BRD8", "url": "https://www.uniprot.org/uniprotkb/I3LCW6", "locus": { "chromosome": "2", "start_pos": 140168636, "end_pos": 140202247, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014327", "url": "https://www.ensembl.org/id/ENSSSCG00000014327" } ] } } ], "crossref": [ { "id": "I3LCW6", "url": "https://alphafold.ebi.ac.uk/entry/I3LCW6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000014327", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014327", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd05507", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05507", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001487", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001487", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036427", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036427", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037966", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037966", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15398", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15398", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15398:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15398:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00439", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00439", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BBE7", "url": "https://www.uniprot.org/uniprotkb/A0A287BBE7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBE7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBE7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RH79", "url": "https://www.uniprot.org/uniprotkb/F1RH79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RH79-1", "url": "https://www.uniprot.org/uniprotkb/F1RH79-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCW6-1", "url": "https://www.uniprot.org/uniprotkb/I3LCW6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAGTGKHKLLSTGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVETVEDVIVRKLTAERVEELKKVIKETQEKYRRLKRDAELIQAGHMDSRLDELCNDIAMKKKLEEEEAEVKRKATDAAYQARQAVKTPPRRLPTMMVRSPIDSASPGGDYPLGDLTATTMEEATSGVNESEMAVTSGHLNNTGVLLEVGGVLPMIHGGEMQQTPNTVAASTAASGAPTLSRLLEAGPTQFTTPLASFTTVASEPPVKLVPPPVESVSQATIVMMPALPAPSSAPAVATPESVAPVSQPDTCVPMETVGDPHTVTVSMDSSEISMIINSIKEECFRSGVAEAPGGSKAPSIDGKEDLDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCEENDDPQSLPGPWEHPIQQERDKTVPLPAPEMTVKQERLDFEETESKGIHELVDLREPSVEIKMEPTEPEQGISGPEIVAGVVPPPSMEPPELRSQDLNEEPRSTTTGEITEADVSSRKGDETSLRTVKTEASPESMLSPSHGSNPIEDPLESETQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGVSEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLADSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDSTRKQDASEKDSVPMGSPAFLLSLFMGHEWVWLDSEQDYPNDSELSNDCRSLFSSWDSSLDLDVGSWRETEEPGAEELEESSPGREASELLVGDGGSEESQEETEQVSRQNLLHFLSEVAYLMEPLCISSKESREGCCPPSGTRQPEAREFEAAEREGEPCRESKELSAKVEPLVAEKSSLGENERPEVASGSADNWALQEHPTDSEEGVVQQESKGEDQGEGYVSEMEDQHSLGDCDDGFSIQETPLVDMLFSHATSSKLSDLGHGDPVQDHLLFKKTLLPVWKMIASHRFSSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFQRDLMLMFQNAVMYNDSDHHVYHMAVEMQREVLEQIQVLSIWLDQRRDLNSLEEPTNPVDDGKPTF", "length": 1236, "header": "tr|I3LCW6-1|I3LCW6_PIG Isoform 1 of Bromodomain-containing protein 8 OS=Sus scrofa OX=9823 GN=BRD8 PE=4 SV=3 CANONICAL=I3LCW6-1" }, "isoforms": [ { "isoform_ac": "A0A287BBE7-1", "url": "https://www.uniprot.org/uniprotkb/I3LCW6/entry#A0A287BBE7-1", "sequence": { "sequence": "MAAGTGKHKLLSTGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVETVEDVIVRKLTAERVEELKKVIKETQEKYRRLKRDAELIQAGHMDSRLDELCNDIAMKKKLEEEEAEVKRKATDAAYQARQAVKTPPRRLPTMMVRSPIDSASPGGDYPLGDLTATTMEEATSGVTPGTLPSTPVTSFPGIPDTLPPGSAPLEAPMTPVTDDSPQKKMLGQKATPPSPLLSELLKKGSLLPTSPRLVNESEMAVTSGHLNNTGVLLEVGGVLPMIHGGEMQQTPNTVAASTAASVSQPDTCVPMETVGDPHTVTVSMDSSEISMIINSIKEECFRSGVAEAPGGSKAPSIDGKEDLDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCEENDDPQSLPGPWEHPIQQERDKTVPLPAPEMTVKQERLDFEETESKGIHELVDLREPSVEIKMEPTEPEQGISGPEIVAGVVPPPSMEPPELRSQDLNEEPRSTTTGEITEADVSSRKGDETSLRTVKTEASPESMLSPSHGSNPIEDPLESETQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGVSEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLADSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDSTRKQDASEKDGGTRGRRCAIEADMKMKK", "length": 865, "header": "tr|A0A287BBE7-1|A0A287BBE7_PIG Computationally mapped isoform of Bromodomain-containing protein 8 OS=Sus scrofa OX=9823 GN=BRD8 PE=4 SV=2 CANONICAL=I3LCW6-1" }, "locus": { "chromosome": "2", "start_pos": 140201882, "end_pos": 140182518, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054777.2", "url": "https://www.ensembl.org/id/ENSSSCT00000054777.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053393.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053393.2" } ] } }, { "isoform_ac": "F1RH79-1", "url": "https://www.uniprot.org/uniprotkb/I3LCW6/entry#F1RH79-1", "sequence": { "sequence": "MAAGTGKHKLLSTGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVETVEDVIVRKLTAERVEELKKVIKETQEKYRRLKRDAELIQAGHMDSRLDELCNDIAMKKKLEEEEAEVKRKATDAAYQARQAVKTPPRRLPTMMVRSPIDSASPGGDYPLGDLTATTMEEATSGVTPGTLPSTPVTSFPGIPDTLPPGSAPLEAPMTPVTDDSPQKKMLGQKATPPSPLLSELLKKGSLLPTSPRLVNESEMAVTSGHLNNTGVLLEVGGVLPMIHGGEMQQTPNTVAASTAASGAPTLSRLLEAGPTQFTTPLASFTTVASEPPVKLVPPPVESVSQATIVMMPALPAPSSAPAVATPESVAPVSQPDTCVPMETVGDPHTVTVSMDSSEISMIINSIKEECFRSGVAEAPGGSKAPSIDGKEDLDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCEENDDPQSLPGPWEHPIQQERDKTVPLPAPEMTVKQERLDFEETESKGIHELVDLREPSVEIKMEPTEPEQGISGPEIVAGVVPPPSMEPPELRSQDLNEEPRSTTTGEITEADVSSRKGDETSLRTVKTEASPESMLSPSHGSNPIEDPLESETQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGVSEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLADSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDSTRKQDASEKDSVPMGSPAFLLSLFDGGTRGRRCAIEADMKMKK", "length": 950, "header": "tr|F1RH79-1|F1RH79_PIG Computationally mapped isoform of Bromodomain-containing protein 8 OS=Sus scrofa OX=9823 GN=BRD8 PE=4 SV=4 CANONICAL=I3LCW6-1" }, "locus": { "chromosome": "2", "start_pos": 140201882, "end_pos": 140182518, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015653.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015653.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015240.4", "url": "https://www.ensembl.org/id/ENSSSCP00000015240.4" } ] } }, { "isoform_ac": "I3LCW6-1", "url": "https://www.uniprot.org/uniprotkb/I3LCW6/entry#I3LCW6-1", "sequence": { "sequence": "MAAGTGKHKLLSTGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWFSQKHCASQYSELLETTETPKRKRGEKGEVVETVEDVIVRKLTAERVEELKKVIKETQEKYRRLKRDAELIQAGHMDSRLDELCNDIAMKKKLEEEEAEVKRKATDAAYQARQAVKTPPRRLPTMMVRSPIDSASPGGDYPLGDLTATTMEEATSGVNESEMAVTSGHLNNTGVLLEVGGVLPMIHGGEMQQTPNTVAASTAASGAPTLSRLLEAGPTQFTTPLASFTTVASEPPVKLVPPPVESVSQATIVMMPALPAPSSAPAVATPESVAPVSQPDTCVPMETVGDPHTVTVSMDSSEISMIINSIKEECFRSGVAEAPGGSKAPSIDGKEDLDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCEENDDPQSLPGPWEHPIQQERDKTVPLPAPEMTVKQERLDFEETESKGIHELVDLREPSVEIKMEPTEPEQGISGPEIVAGVVPPPSMEPPELRSQDLNEEPRSTTTGEITEADVSSRKGDETSLRTVKTEASPESMLSPSHGSNPIEDPLESETQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGVSEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLADSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSLRGRDSTRKQDASEKDSVPMGSPAFLLSLFMGHEWVWLDSEQDYPNDSELSNDCRSLFSSWDSSLDLDVGSWRETEEPGAEELEESSPGREASELLVGDGGSEESQEETEQVSRQNLLHFLSEVAYLMEPLCISSKESREGCCPPSGTRQPEAREFEAAEREGEPCRESKELSAKVEPLVAEKSSLGENERPEVASGSADNWALQEHPTDSEEGVVQQESKGEDQGEGYVSEMEDQHSLGDCDDGFSIQETPLVDMLFSHATSSKLSDLGHGDPVQDHLLFKKTLLPVWKMIASHRFSSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFQRDLMLMFQNAVMYNDSDHHVYHMAVEMQREVLEQIQVLSIWLDQRRDLNSLEEPTNPVDDGKPTF", "length": 1236, "header": "tr|I3LCW6-1|I3LCW6_PIG Isoform 1 of Bromodomain-containing protein 8 OS=Sus scrofa OX=9823 GN=BRD8 PE=4 SV=3 CANONICAL=I3LCW6-1" }, "locus": { "chromosome": "2", "start_pos": 140201882, "end_pos": 140168639, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026144.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026144.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021894.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021894.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 16, "start_aa": "Thr", "end_pos": 16, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr16", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "NuA4 histone acetyltransferase complex", "id": "GO:0035267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035267", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "Swr1 complex", "id": "GO:0000812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000812", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "cellular response to thyroid hormone stimulus", "id": "GO:0097067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097067", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "regulation of cell cycle", "id": "GO:0051726", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051726", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "positive regulation of double-strand break repair via homologous recombination", "id": "GO:1905168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905168", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" }, { "name": "nuclear thyroid hormone receptor binding", "id": "GO:0046966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046966", "evidence": [ { "database": "UniProtKB", "id": "I3LCW6", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1158, "end_pos": 1160, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1185, "end_pos": 1187, "annotation": "n_glycosylation_sequon" }, { "start_pos": 216, "end_pos": 218, "annotation": "n_glycosylation_sequon" }, { "start_pos": 228, "end_pos": 230, "annotation": "n_glycosylation_sequon" }, { "start_pos": 675, "end_pos": 677, "annotation": "n_glycosylation_sequon" }, { "start_pos": 787, "end_pos": 789, "annotation": "n_glycosylation_sequon" }, { "start_pos": 875, "end_pos": 877, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LCW6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1236, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LCW6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LCW6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LCW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCW6" }, { "id": "PS50014", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50014" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Bromo", "eco_id": "ECO_0000259", "start_pos": 724, "end_pos": 794, "start_aa": "Ala", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 16 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1158, "end_pos": 1160 }, { "start_pos": 1185, "end_pos": 1187 }, { "start_pos": 216, "end_pos": 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[], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LEZ3", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LSAMP", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3", "locus": { "chromosome": "13", "start_pos": 144304151, "end_pos": 143675575, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027941", "url": "https://www.ensembl.org/id/ENSSSCG00000027941" } ] } } ], "crossref": [ { "id": "I3LEZ3", "url": "https://alphafold.ebi.ac.uk/entry/I3LEZ3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027941", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027941", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00096", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00096", "database": "CDD", "categories": [ "Protein 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"categories": [ "Protein Classification" ] }, { "id": "IPR050876", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050876", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "I3LEZ3", "url": "https://www.orthodb.org/?gene=I3LEZ3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR42757", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42757", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR42757:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42757:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-163125", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-163125", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020924073", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924073", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BG58", "url": "https://www.uniprot.org/uniprotkb/A0A287BG58", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BG58-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BG58-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIT6", "url": "https://www.uniprot.org/uniprotkb/A0A287BIT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BIT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BIT6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2Z2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Z2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2Z2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Z2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9N8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9N8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9N8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9N8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEZ3", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEZ3-1", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVARVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPTGRELEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRKASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANNLGVTNASLVLFKRVLPTIPHPIQEIGTTVHFKQKGPGSVRGINGSISLAVPLWLLAASLLCLLSKC", "length": 361, "header": "tr|I3LEZ3-1|I3LEZ3_PIG Isoform 1 of Limbic system associated membrane protein OS=Sus scrofa OX=9823 GN=LSAMP PE=1 SV=4 CANONICAL=I3LEZ3-1" }, "isoforms": [ { "isoform_ac": "A0A287BG58-1", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3/entry#A0A287BG58-1", "sequence": { "sequence": "MVLFYFARCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPTGRELEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRKASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANNLGVTNASLVLFSKYAEQGPLRRTRSVEQDLQMEYILSLFSSLLLITALFLCCFSFWFFVLVG", "length": 313, "header": "tr|A0A287BG58-1|A0A287BG58_PIG Computationally mapped isoform of Limbic system associated membrane protein OS=Sus scrofa OX=9823 GN=LSAMP PE=1 SV=2 CANONICAL=I3LEZ3-1" }, "locus": { "chromosome": "13", "start_pos": 144270547, "end_pos": 144016376, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043882.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043882.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055031.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055031.2" } ] } }, { "isoform_ac": "A0A287BIT6-1", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3/entry#A0A287BIT6-1", "sequence": { "sequence": "THSDCLLPNWALMVLFYFARCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPTGRELEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRKASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANNLGVTNASLVLFSKYAEQGPLRRTRSVEQDLQMEYILSLFSSLLLITALFLCCFSFWFFVLVG", "length": 325, "header": "tr|A0A287BIT6-1|A0A287BIT6_PIG Computationally mapped isoform of Limbic system associated membrane protein OS=Sus scrofa OX=9823 GN=LSAMP PE=1 SV=3 CANONICAL=I3LEZ3-1" }, "locus": { "chromosome": "13", "start_pos": 144270547, "end_pos": 144016157, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057528.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057528.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056516.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056516.3" } ] } }, { "isoform_ac": "A0A5G2R2Z2-1", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3/entry#A0A5G2R2Z2-1", "sequence": { "sequence": "MVLFYFARCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPTGRELEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRKASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANNLGVTNASLVLFKRVLPTIPHPIQGPGSVRGINGSISLAVPLWLLAASLLCLLSKC", "length": 306, "header": "tr|A0A5G2R2Z2-1|I3LEZ3_PIG Computationally mapped isoform of Limbic system associated membrane protein OS=Sus scrofa OX=9823 GN=LSAMP PE=1 SV=2 CANONICAL=I3LEZ3-1" }, "locus": { "chromosome": "13", "start_pos": 144300642, "end_pos": 144016376, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086666.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086666.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068567.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068567.2" } ] } }, { "isoform_ac": "A0A5G2R9N8-1", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3/entry#A0A5G2R9N8-1", "sequence": { "sequence": "MCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPTGRELEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRKASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANNLGVTNASLVLFSKTWVGERNKRIHQSGRTTVAAGSISALPSQQMLIE", "length": 291, "header": "tr|A0A5G2R9N8-1|I3LEZ3_PIG Computationally mapped isoform of Limbic system associated membrane protein OS=Sus scrofa OX=9823 GN=LSAMP PE=1 SV=2 CANONICAL=I3LEZ3-1" }, "locus": { "chromosome": "13", "start_pos": 144300650, "end_pos": 143825527, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067328.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067328.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070844.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070844.2" } ] } }, { "isoform_ac": "I3LEZ3-1", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3/entry#I3LEZ3-1", "sequence": { "sequence": "MVARVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPTGRELEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRKASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANNLGVTNASLVLFKRVLPTIPHPIQEIGTTVHFKQKGPGSVRGINGSISLAVPLWLLAASLLCLLSKC", "length": 361, "header": "tr|I3LEZ3-1|I3LEZ3_PIG Isoform 1 of Limbic system associated membrane protein OS=Sus scrofa OX=9823 GN=LSAMP PE=1 SV=4 CANONICAL=I3LEZ3-1" }, "locus": { "chromosome": "13", "start_pos": 144300642, "end_pos": 143676005, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030211.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030211.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022632.4", "url": "https://www.ensembl.org/id/ENSSSCP00000022632.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2Z2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2Z2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-163125", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-163125", "resource": "Reactome", "description": "Post-translational modification: synthesis of GPI-anchored proteins" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LEZ3", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "I3LEZ3", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LEZ3", "url": "https://www.uniprot.org/uniprotkb/I3LEZ3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "cell adhesion", "id": 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"tr|A0A4X1UBV4-1|A0A4X1UBV4_PIG Computationally mapped isoform of F-box and WD repeat domain containing 11 OS=Sus scrofa OX=9823 GN=FBXW11 PE=4 SV=1 CANONICAL=I3LGM0-1" }, "locus": { "chromosome": "16", "start_pos": 52328391, "end_pos": 52212806, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058532.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058532.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047891.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047891.2" } ] } }, { "isoform_ac": "I3LGM0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGM0/entry#I3LGM0-1", "sequence": { "sequence": "MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR", "length": 563, "header": "tr|I3LGM0-1|I3LGM0_PIG Isoform 1 of F-box and WD repeat domain containing 11 OS=Sus scrofa OX=9823 GN=FBXW11 PE=4 SV=3 CANONICAL=I3LGM0-1" }, "locus": { "chromosome": "16", "start_pos": 52328391, "end_pos": 52212806, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048792.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048792.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040325.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040325.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGM0", "url": "https://www.uniprot.org/uniprotkb/I3LGM0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523218", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523218", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "I3LGM0", "url": "https://www.uniprot.org/uniprotkb/I3LGM0" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "I3LGM0", "url": "https://www.uniprot.org/uniprotkb/I3LGM0" } ], "pmid": "" }, { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "I3LGM0", "url": "https://www.uniprot.org/uniprotkb/I3LGM0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "Wnt signaling pathway", "id": "GO:0016055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016055", "evidence": [ { "database": "UniProtKB", "id": "I3LGM0", "url": "https://www.uniprot.org/uniprotkb/I3LGM0" } ], "pmid": "" }, { "name": "protein polyubiquitination", "id": "GO:0000209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000209", "evidence": [ { "database": "UniProtKB", "id": "I3LGM0", "url": "https://www.uniprot.org/uniprotkb/I3LGM0" } ], "pmid": "" }, { "name": "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "id": "GO:0031146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031146", "evidence": [ { "database": "UniProtKB", "id": "I3LGM0", "url": "https://www.uniprot.org/uniprotkb/I3LGM0" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621493", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621493", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WYDILAM", "url": "https://omabrowser.org/oma/group/WYDILAM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LHP2", "url": "https://www.orthodb.org/?gene=I3LHP2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10655", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10655", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10655:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10655:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02230", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02230", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-373760", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-373760", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003356251", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356251", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "19233", "url": "https://www.rhea-db.org/rhea/19233", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "40435", "url": "https://www.rhea-db.org/rhea/40435", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BGW6", "url": "https://www.uniprot.org/uniprotkb/A0A287BGW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGW6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RI53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RI53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RI53-1", "url": 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1 of palmitoyl-protein hydrolase OS=Sus scrofa OX=9823 GN=LYPLA2 PE=1 SV=1 CANONICAL=I3LHP2-1" }, "isoforms": [ { "isoform_ac": "A0A287BGW6-1", "url": "https://www.uniprot.org/uniprotkb/I3LHP2/entry#A0A287BGW6-1", "sequence": { "sequence": "MAGFPGLERKFRRGRPRGKSVCLCGRKRRIAGEVSKPPGSGGPSGGALQCMCGNTMSVPLLTDAATVSGVERETAARRLFSLPSYRHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEIKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLLPPV", "length": 280, "header": "tr|A0A287BGW6-1|A0A287BGW6_PIG Computationally mapped isoform of palmitoyl-protein hydrolase OS=Sus scrofa OX=9823 GN=LYPLA2 PE=1 SV=2 CANONICAL=I3LHP2-1" }, "locus": { "chromosome": "6", "start_pos": 81605106, "end_pos": 81601502, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064849.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064849.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055295.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055295.2" } ] } }, { "isoform_ac": "A0A5G2RI53-1", "url": "https://www.uniprot.org/uniprotkb/I3LHP2/entry#A0A5G2RI53-1", "sequence": { "sequence": "MCGNTMSVPLLTDAATVSGVERETAARRLFSLPSYRHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENRWGPVPLHSPHLPPPSGWHCGIELLAASASGFPPGGCLHDPAPALHLLVAGGLC", "length": 151, "header": "tr|A0A5G2RI53-1|I3LHP2_PIG Computationally mapped isoform of palmitoyl-protein hydrolase OS=Sus scrofa OX=9823 GN=LYPLA2 PE=1 SV=2 CANONICAL=I3LHP2-1" }, "locus": { "chromosome": "6", "start_pos": 81604773, "end_pos": 81603086, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074509.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074509.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071172.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071172.2" } ] } }, { "isoform_ac": "A0A8D1FTX7-1", "url": "https://www.uniprot.org/uniprotkb/I3LHP2/entry#A0A8D1FTX7-1", "sequence": { "sequence": "MCGNTMSVPLLTDAATVSGVERETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEIKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQVGVSDPAPALHLLVAGGLLKHW", "length": 179, "header": "tr|A0A8D1FTX7-1|I3LHP2_PIG Computationally mapped isoform of palmitoyl-protein hydrolase OS=Sus scrofa OX=9823 GN=LYPLA2 PE=1 SV=1 CANONICAL=I3LHP2-1" }, "locus": { "chromosome": "6", "start_pos": 81604784, "end_pos": 81603086, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070083.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070083.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070042.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070042.1" } ] } }, { "isoform_ac": "I3LHP2-1", "url": "https://www.uniprot.org/uniprotkb/I3LHP2/entry#I3LHP2-1", "sequence": { "sequence": "MAGFPGLERKFRRGRPRGKSVCLCGRKRRIAGEVSKPPGSGGPSGGALQCMCGNTMSVPLLTDAATVSGVERETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEIKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLLPPV", "length": 281, "header": "tr|I3LHP2-1|I3LHP2_PIG Isoform 1 of palmitoyl-protein hydrolase OS=Sus scrofa OX=9823 GN=LYPLA2 PE=1 SV=1 CANONICAL=I3LHP2-1" }, "locus": { "chromosome": "6", "start_pos": 81605106, "end_pos": 81601502, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024963.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024963.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023589.1", "url": "https://www.ensembl.org/id/ENSSSCP00000023589.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 246, "start_aa": "Thr", "end_pos": 246, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr246", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RI53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RI53" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621493", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621493", "resource": "KEGG Pathway" }, { "id": "R-SSC-373760", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-373760", "resource": "Reactome", "description": "L1CAM interactions" } ], "orthologs": [ { "uniprot_canonical_ac": "M9PEW1-1", "protein_name": "palmitoyl-protein hydrolase", "gene_name": "Apt1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAAPVIVEATVKQTATLIFMHGLGDTGHGWSSALAAIRPPFMKVICPTAPTQPVSLNAGFRMPSWFDLKTLDIGGPEDEPGIQSARDSVHGMIQKEISAGIPANRIVLGGFSQGGALALYSALTYDQPLAGVVALSCWLPLHKQFPGAKVNSDDVPIFQAHGDYDPVVPYKFGQLSASLLKSFMKNVTFKTYSGLSHSSSDDEMDDVKDIISKWTQWDSQNMARKAQCCQLS", "length": 232 }, "evidence": [ { "id": "I3LHP2", "url": "https://omabrowser.org/oma/group/I3LHP2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O95372-1", "protein_name": "Acyl-protein thioesterase 2", "gene_name": "LYPLA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MCGNTMSVPLLTDAATVSGAERETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLLPPV", "length": 231 }, "evidence": [ { "id": "I3LHP2", "url": "https://omabrowser.org/oma/group/I3LHP2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q12354-1", "protein_name": "Acyl-protein thioesterase 1", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MNGLRVAAKIQPARQTIIFLHGLGDTGSGWGFLAQYLQQRDPAAFQHTNFVFPNAPELHVTANGGALMPAWFDILEWDPSFSKVDSDGFMNSLNSIEKTVKQEIDKGIKPEQIIIGGFSQGAALALATSVTLPWKIGGIVALSGFCSIPGILKQHKNGINVKTPIFHGHGDMDPVVPIGLGIKAKQFYQDSCEIQNYEFKVYKGMAHSTVPDELEDLASFIKKSLSS", "length": 227 }, "evidence": [ { "id": "I3LHP2", "url": "https://omabrowser.org/oma/group/I3LHP2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q54T49-1", "protein_name": "Acyl-protein thioesterase 1 homolog 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKTILKNSYIQKEITTHSATVIFSHGLGDSGAGWIEVMEEIQSRNNGHIRFICPNAPIQAVTLNGGFKMPSWYDIKSLSSRGDEDPAQVDESKNIIETIIKHEMEEEKIPAERIIIGGFSQGAALSLYTFYSQTETKLGGCIALSGYLPLATKFVANSLNKEQPLLMIHGDCDQVVRHQWGKLSFDHLKSQGINGEFITLKGLGHHSSPEEIDLMTKFISKTLPK", "length": 226 }, "evidence": [ { "id": "I3LHP2", "url": "https://omabrowser.org/oma/group/I3LHP2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8GYK2-1", "protein_name": "Probable carboxylesterase SOBER1-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MRTSRLKKPIVLLTIALLSSVFFFAFFFLNKSDVSSTSALRNRDSMARTFILWLHGLGDSGPANEPIKTLFRSQEFRNTKWLFPSAPPNPVSCNYGAVMPSWFDIPELPLTAGSPKDESSLLKAVKNVHAIIDKEIAGGINPENVYICGFSQGGALTLASVLLYPKTIGGGAVFSGWIPFNSSITNQFTEDAKKTPILWSHGIDDKTVLFEAGQAALPFLQQAGVTCEFKAYPGLGHSISNEELQYLESWLKQRMQSSSSSS", "length": 262 }, "evidence": [ { "id": "I3LHP2", "url": "https://omabrowser.org/oma/group/I3LHP2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9WTL7-1", "protein_name": "Acyl-protein thioesterase 2", "gene_name": "Lypla2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCGNTMSVPLLTDAATVSGAERETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALSCWLPLHRNFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLLPPV", "length": 231 }, "evidence": [ { "id": "I3LHP2", "url": "https://omabrowser.org/oma/group/I3LHP2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" }, { "name": "Golgi stack", "id": "GO:0005795", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005795", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "fatty acid metabolic process", "id": "GO:0006631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006631", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" }, { "name": "acylglycerol catabolic process", "id": "GO:0046464", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046464", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" }, { "name": "prostaglandin catabolic process", "id": "GO:1905344", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905344", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "palmitoyl-(protein) hydrolase activity", "id": "GO:0008474", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008474", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" }, { "name": "phosphatidylcholine lysophospholipase activity", "id": "GO:0004622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004622", "evidence": [ { "database": "UniProtKB", "id": "I3LHP2", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19233", "name": "", "equation": "S-hexadecanoyl-L-cysteinyl-[protein] + H2O = L-cysteinyl-[protein] + hexadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19233", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19233" } ] }, { "id": "40435", "name": "", "equation": "1-hexadecanoyl-sn-glycero-3-phosphocholine + H2O = sn-glycerol 3-phosphocholine + hexadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "40435", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/40435" } ] }, { "id": "R-SSC-8933328", "name": "LYPLA2 hydrolyses PALM-C3,4-GAP43", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [ "R-SSC-8933482" ], "output_participant_list": [ "R-SSC-452888" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8933328", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8933328" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-452888", "participant_name": "GAP43 [plasma membrane]", "crossref": [ { "id": "ENSSSCP00000073187", "database": "ENSEMBL", "url": "" }, { "id": "98018", "database": "VGNC", "url": "" }, { "id": "A0A5G2R7G3", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000031244", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000071628", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-8933482", "participant_name": "GAP43 [plasma membrane]", "crossref": [ { "id": "A0A5G2R7G3", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000031244", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000073187", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000071628", "database": "ENSEMBL", "url": "" }, { "id": "98018", "database": "VGNC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LHP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHP2" }, { "id": "PF02230", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02230" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phospholipase/carboxylesterase/thioesterase", "eco_id": "ECO_0000259", "start_pos": 63, "end_pos": 277, "start_aa": "Asp", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 246 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 210, "end_pos": 212 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LB78-1", "uniprot_ac": "I3LB78", "uniprot_id": "I3LB78_PIG", "mass": { "chemical_mass": 90936.0, "monoisotopic_mass": 90936.0 }, "refseq": {}, "gene_names": [ { "name": "DNAI4", "type": "recommended", "evidence": [ { "id": "I3LB78", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ] } ], "protein_names": [ { "name": "Dynein axonemal intermediate chain 4", "type": "recommended", "evidence": [ { "id": "I3LB78", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LB78/entry#names_and_taxonomy" } ] }, { "name": "WD repeat-containing protein 78", "type": "synonym", "evidence": [ { "id": "I3LB78", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LB78/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a critical role in the assembly of axonemal dynein complex, thereby playing a role in ciliary motility.", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78#function" }, { "database": "UniProtKB", "id": "ARBA00057635", "url": "https://www.uniprot.org/uniprotkb/ARBA00057635#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DNAI4", "url": "https://www.uniprot.org/uniprotkb/I3LB78", "locus": { "chromosome": "6", "start_pos": 145768488, "end_pos": 145680052, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022305", "url": "https://www.ensembl.org/id/ENSSSCG00000022305" } ] } } ], "crossref": [ { "id": "ENSSSCG00000022305", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022305", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050687", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050687", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "VFVWSIK", "url": "https://omabrowser.org/oma/group/VFVWSIK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12442", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12442", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12442:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12442:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BM06", "url": "https://www.uniprot.org/uniprotkb/A0A287BM06", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BM06-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BM06-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJU7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJU7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0PBZ0", "url": "https://www.uniprot.org/uniprotkb/A0A8D0PBZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0PBZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0PBZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB78-1", "url": "https://www.uniprot.org/uniprotkb/I3LB78-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPISPVNSRKQQNLGVNVGAQPRRSISFNGPAKGAQVRGGYVGANQSRMALSKTMVIPSDIRTTEKMNISSTKVVTQVIDIHGVDVTPRPLYHPDPHTGGTAKPNKLFTSQEGSHTSEFVASYSLYQNTLGQFTRSVLGSSTVSKSSVSITESMAEDLEEPSYKRERLTSFTDLRVMRATPGKIVTKEDLDKTIEIILTETETMSFFNLPTIMVSVESEEAEKVSQRNKNYENLCRNRLGNDLYVERMIQTINGAPKNKDVQCDKIVKEDKGIMSTAWDLYDSYNATELSSLPVKQSIVDSSNKASIPPKDRDQRMPGSNLEKISEGSSIMDIENVILAKIRDDEEDHSDTVLKSDKFQQDLFFMERVIMGNIFQPKLAAYRQLPVLKEPEPEDPEDFLEGEKLEEVEEEAKKEEEEEIEIGSEQSTIPANLERLWSFSCDLTKGLNVSSLTWNKTNPDLLAVGYGNFGFKEQKRGLACCWSIKNPMWPERTYQSPCGVTSVDFSIGSPNLLAVGYHNGTIAIYNVQSNSDVPVLDSSESPQKHLGPVWQLQWIEQDRGTTGDDKREILVSISADGRISKWIIRKGLDCHDLMRLRRTTAGSSKKGGEKEKKGEALISRQAPGMCFAFHPKDTNIYLAGTEEGHIHKCSCSYNEQYLDTYRGHKGPVYKIAWNPFCHDVFLSCSADWGVIVWQHENLKPFLSFYPTTHVVYDISWSPKSPYIFAAANETRVEIWDLHISTLDPLIVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTTLDSNRGDIIDTLLGPKSNQSIIHHQ", "length": 812, "header": "tr|I3LB78-1|I3LB78_PIG Isoform 1 of Dynein axonemal intermediate chain 4 OS=Sus scrofa OX=9823 GN=DNAI4 PE=4 SV=2 CANONICAL=I3LB78-1" }, "isoforms": [ { "isoform_ac": "A0A287BM06-1", "url": "https://www.uniprot.org/uniprotkb/I3LB78/entry#A0A287BM06-1", "sequence": { "sequence": "MPISPVNSRKQQNLGVNVGAQPRRSISFNGPAKGAQVRGGYVGANQSRMALSKTMVIPSDIRTTEKMNISSTKVVTQVIDIHGVDVTPRPLYHPDPHTGGTAKPNKLFTSQEGSHTSEFVASYSLYQNTLGQFTRSVLGSSTVSKSSVSITESMAEDLEEPSYKRERLTSFTDLRVMRATPGKIVTKEDLDKTIEIILTETETMSFFNLPTIMVSVESEEAEKVSQRNKNYENLCRNRLGNDLYVERMIQTINGAPKNKDVQCDKIVKEDKGIMSTAWDLYDSYNATELSSLPVKQSIVDSSNKASIPPKDRDQRMPGSNLEKISEGSSIMDIENVILAKIRDDEEDHSDTVLKSDKFQQDLFFMERVIMGNIFQPKLAAYRQLPVLKEPEPEDPEDFLEGEKLEEVEEEAKKEEEEEIEIGSEQSTIPANLERLWSFSCDLTKGLNVSSLTWNKTNPDLLAVGYGNFGFKEQKRGLACCWSIKNPMWPERTYQSPCGVTSVDFSIGSPNLLAVGYHNGTIAIYNVQSNSDVPVLDSSESPQKHLGPVWQLQWIEQDRGTTGDDKREILVSISADGRISKWIIRKGLDCHDLMRLRRTTAGSSKKGGEKEKKGEALISRQAPGMCFAFHPKGPVYKIAWNPFCHDVFLSCSADWGVIVWQHENLKPFLSFYPTTHVVYDISWSPKSPYIFAAANETRVEIWDLHISTLDPLIVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTTLDSNRNIVGEVILSHRLK", "length": 772, "header": "tr|A0A287BM06-1|A0A287BM06_PIG Computationally mapped isoform of Dynein axonemal intermediate chain 4 OS=Sus scrofa OX=9823 GN=DNAI4 PE=4 SV=2 CANONICAL=I3LB78-1" }, "locus": { "chromosome": "6", "start_pos": 145764128, "end_pos": 145680256, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052894.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052894.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057655.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057655.2" } ] } }, { "isoform_ac": "A0A5G2QJU7-1", "url": "https://www.uniprot.org/uniprotkb/I3LB78/entry#A0A5G2QJU7-1", "sequence": { "sequence": "MPISPVNSRKQQNLGVNVGAQPRRSISFNGPAKGAQVRGGYVGANQSRMALSKTMVIPSDIRTTEKMNISSTKVVTQVIDIHGVDVTPRPLYHPDPHTGGTAKPNKLFTSQEGSHTSEFVASYSLYQNTLGQFTRSVLGSSTVSKSSVSITESMAEDLEEPSYKRERLTSFTDLRVMRATPGKIVTKEDLDKTIEIILTETETMSFFNLPTIMVSVESEEAEKVSQRNKNYENLCRNRLGNDLYVERMIQTINGAPKNKDVQCDKIVKEDKGIMSTAWDLYDSYNATELSSLPVKQSIVDSSNKASIPPKDRDQRMPGSNLEKISEGSSIMDIENVILAKIRDDEEDHSDTVLKSDKFQQDLFFMERVIMGNIFQPKLAAYRQLPVLKEPEPEDPEDFLEGEKLEEVEEEAKKEEEEEIEIGSEQSTIPANLERLWSFSCDLTKGLNVSSLTWNKTNPWPERTYQSPCGVTSVDFSIGSPNLLAVGYHNGTIAIYNVQSNSDVPVLDSSESPQKHLGPVWQLQWIEQDRGTTGDDKREILVSISADGRISKWIIRKGLDCHDLMRLRRTTAGSSKKGGEKEKKGEALISRQAPGMCFAFHPKDTNIYLAGTEEGHIHKCSCSYNEQYLDTYRGHKGPVYKIAWNPFCHDVFLSCSADWGVIVWQHENLKPFLSFYPTTHVVYDISWSPKSPYIFAAANETRVEIWDLHISTLDPLIVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTTLDSNRGDIIDTLLGPKSNQSIIHHQ", "length": 783, "header": "tr|A0A5G2QJU7-1|I3LB78_PIG Computationally mapped isoform of Dynein axonemal intermediate chain 4 OS=Sus scrofa OX=9823 GN=DNAI4 PE=4 SV=1 CANONICAL=I3LB78-1" }, "locus": { "chromosome": "6", "start_pos": 145753585, "end_pos": 145680256, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076470.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076470.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062327.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062327.1" } ] } }, { "isoform_ac": "A0A8D0PBZ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LB78/entry#A0A8D0PBZ0-1", "sequence": { "sequence": "MPISPVNSRKQQNLGVNVGAQPRRSISFNGPAKGAQVRGGYVGANQSRMALSKTMVIPSDIRTTEKMNISSTKVVTQVIDIHGVDVTPRPLYHPDPHTGGTAKPNKLFTSQEGSHTSEFVASYSLYQNTLGQFTRSVLGSSTVSKSSVSITESMAEDLEEPSYKRERLTSFTDLRVMRATPGKIVTKEDLDKTIEIILTETETMSFFNLPTIMVSVESEEAEKVSQRNKNYENLCRNRLGNDLYVERMIQTINGAPKNKDVQCDKIVKEDKGIMSTAWDLYDSYNATELSSLPVKQSIVDSSNKASIPPKDRDQRMPGSNLEKISEGSSIMDIENVILAKIRDDEEDHSDTVLKSDKFQQDLFFMERVIMGNIFQPKLAAYRQLPVLKEPEPEDPEDFLEGEKLEEVEEEAKKEEEEEIEIGSEQSTIPANLERLWSFSCDLTKGLNVSSLTWNKTNPDLLAVGYGNFGFKEQKRGLACCWSIKNPMWPERTYQSPCGVTSVDFSIGSPNLLAVGYHNGTIAIYNVQSNSDVPVLDSSESPQKHLGPVWQLQWIEQDRGTTGDDKREILVSISADGRISKWIIRKGLDCHDLMRLRRTTAGSSKKGGEKEKKGEALISRQAPGMCFAFHPKGPVYKIAWNPFCHDVFLSCSADWGVIVWQHENLKPFLSFYPTTHVVYDISWSPKSPYIFAAANETRVEIWDLHISTLDPLIVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTTLDSNRGDIIDTLLGPKSNQSIIHHQ", "length": 779, "header": "tr|A0A8D0PBZ0-1|I3LB78_PIG Computationally mapped isoform of Dynein axonemal intermediate chain 4 OS=Sus scrofa OX=9823 GN=DNAI4 PE=4 SV=1 CANONICAL=I3LB78-1" }, "locus": { "chromosome": "6", "start_pos": 145753585, "end_pos": 145680256, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039145.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039145.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055087.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055087.1" } ] } }, { "isoform_ac": "I3LB78-1", "url": "https://www.uniprot.org/uniprotkb/I3LB78/entry#I3LB78-1", "sequence": { "sequence": "MPISPVNSRKQQNLGVNVGAQPRRSISFNGPAKGAQVRGGYVGANQSRMALSKTMVIPSDIRTTEKMNISSTKVVTQVIDIHGVDVTPRPLYHPDPHTGGTAKPNKLFTSQEGSHTSEFVASYSLYQNTLGQFTRSVLGSSTVSKSSVSITESMAEDLEEPSYKRERLTSFTDLRVMRATPGKIVTKEDLDKTIEIILTETETMSFFNLPTIMVSVESEEAEKVSQRNKNYENLCRNRLGNDLYVERMIQTINGAPKNKDVQCDKIVKEDKGIMSTAWDLYDSYNATELSSLPVKQSIVDSSNKASIPPKDRDQRMPGSNLEKISEGSSIMDIENVILAKIRDDEEDHSDTVLKSDKFQQDLFFMERVIMGNIFQPKLAAYRQLPVLKEPEPEDPEDFLEGEKLEEVEEEAKKEEEEEIEIGSEQSTIPANLERLWSFSCDLTKGLNVSSLTWNKTNPDLLAVGYGNFGFKEQKRGLACCWSIKNPMWPERTYQSPCGVTSVDFSIGSPNLLAVGYHNGTIAIYNVQSNSDVPVLDSSESPQKHLGPVWQLQWIEQDRGTTGDDKREILVSISADGRISKWIIRKGLDCHDLMRLRRTTAGSSKKGGEKEKKGEALISRQAPGMCFAFHPKDTNIYLAGTEEGHIHKCSCSYNEQYLDTYRGHKGPVYKIAWNPFCHDVFLSCSADWGVIVWQHENLKPFLSFYPTTHVVYDISWSPKSPYIFAAANETRVEIWDLHISTLDPLIVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTTLDSNRGDIIDTLLGPKSNQSIIHHQ", "length": 812, "header": "tr|I3LB78-1|I3LB78_PIG Isoform 1 of Dynein axonemal intermediate chain 4 OS=Sus scrofa OX=9823 GN=DNAI4 PE=4 SV=2 CANONICAL=I3LB78-1" }, "locus": { "chromosome": "6", "start_pos": 145753585, "end_pos": 145680256, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025606.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025606.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021297.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021297.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJU7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJU7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZUM8-1", "protein_name": "Dynein axonemal intermediate chain 4", "gene_name": "WDR78", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPGTGGARRFSVARQRLRATFGSRKQVYIEGSSHVPTSTGTAVQKAAQEHRQRDVRVFDDEGKDVTPHPLFHPDPITAASKQSKLLALSDYSGATGTSESSRISKSTMSIPESMLDGTAEPDSLQDTAVSLPDVQVRQEEIKEQLTEEDLDKRVDIYLTETETLRMLDLPPVVVSVESEDAARVLERNKIYVDICKNRPGNDRFVEKMMQTINGAAKNKEVQCDKIIMEDKGIVVTTCDLYDNTSQVEPTSKAEGSRAPAEKRSTSVMTKDRATSAAAERGSITSMTILESAGLARVHEEKCHTEATLRSENFQQNVFFMERILMENIFQHKLAAYRQFPVLIDPLVTLGAGSTLAAIEEAEQEEHDREKMDKKEQKGTLTDPSILSELNKASEEMVPPSLEQLWSYRCDLTHQHNVSSMAWSKVNLDLLAVGYGAFDFKEQKEGLACCWSLKNPMWPERIFQCEHGVTALDFSMATPNLLAVGMYNGTIVVYDVQSSDSTTVFHSRECSAKHTGPVWQLKWVEWDIGTREGNKRERLISISADGRITQWFIQEGLGCIDLMKIKRARSKRKNLPGEKERKNEAMISQWAAGMCFDFHPKDTYLYLAGTEDGLIHKCSRSCNKQFLKTYRGHKGPVYKVAWNPFTTDTFLSCSVDWSVILWHQNSQTPILTFSSTTTVVHDIMWSPKSAFMFAAASESRVEIWDLSISILDPVITRFANPEAKFTSVLFAKNTDCLLVGDSRGEVSVFELQNLAASSSTEVDALRGAIGPALFP", "length": 774 }, "evidence": [ { "id": "I3LB78", "url": "https://omabrowser.org/oma/group/I3LB78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7FI40-1", "protein_name": "Dynein axonemal intermediate chain 4", "gene_name": "Dnai4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFGSPTGTRKQAIFNTSPSSQTRRSISFNNPSKTSGKGGYAGINQSRLGASKTMLSVPEMKPAEKLSITVTKTIQVFDAAGVDVTPRPLYHPDPLVGTAKPNKLLTSQEGSLTSDFISSYSLYQNTINPSMLGQFTRSVLGSSTVSKSSVSTTESMTEDLEEPAYKRERLASFTDVRVLRPTPETTITKEELQKNIQILLTETETLKFFDLPTVIFSVESEEAEKVIEKNKNYEILCRNRLGNDLYVERMMQTFNGAPKNKEVQCEKIIMEEKGIMATAWDLFDSFNTPEALLSAKQSLVGSKGNLLAKDRDLKLQDSETSSLMDIENVILAKVHEDDEGNSEAILKSEKLQQDLFFMERVLMENVFQSKLAAYRQLPVLKEYEPEEPEEILEEESIEESDEESKEEEEETEVELELEIATEQSTIPANLERLWSFSCDLTKGLNVSSLSWNKANPDLLAVGYGNFGFKEQKRGMACCWSIKNPMWPERIYQSAYGVTSVDFSIATPNLLAVGYHNGTIAIYNVRSNNNFTVLDSSESPQKHLGPVWQLQWIEQDRGTTGDDKREILVSISSDGRISKWIIRKGLDCHDLMRLRRTTAGSNKKGPEKEKKGEALISRQAPGMCFAFHPKDTNVYLVGTEEGLIHKCSCSYNEQYLDTYRGHKGPVYKVTWNPFCQDVFLSCSADWGVMVWRQETFKPVLSFYPTTYVVYDVAWSPKSAYIFAAANESRVEIWDLQISTLDPLIVNFSNPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTASESSRGDVINVLLGPKTNQP", "length": 805 }, "evidence": [ { "id": "I3LB78", "url": "https://omabrowser.org/oma/group/I3LB78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E9PYY5-1", "protein_name": "Dynein axonemal intermediate chain 4", "gene_name": "Dnai4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHSSPTSTRKQASFAASASAQPRKSISFINPSKSSAGKGYAASNPNKLAVSRTMGFLTDMKPAEKLNVPSAKTVQVLDSKGVDVTPRPLYHPDPHAASAKPNKLLTSQEGSLGSDYISSYSLYQNTLNPSMLGQYTRSVLGSSSVSKSSISTTESMSEDLEDSSYKRDRLASFTDVRVLRSTAEAAISKEELEKTIEIILTETETLRFFDLPTVMFSTESEEAEKIIEKNKKYETLCRNRLGNDLYVERMMQTFNGAPKNKEVQCEKIILEEKGVVATTWDLYDSYNIPETLLAAKRSGYSSKGSLPAKDRDPKIQDSESSSLMDIENVILAKVQEDEEDNSEAILKSDKLHQDLFYMERVLMENVFQPKLAAYRQLPVYKEHEPEEPEETLQVENLKVAEDEPKKEDEEEVEMELELEIATEQSTIPANLERLWSFSCDLTKGLNVSSLSWNKANPDLLAVGYGNFGFREQKKGMACCWSIKNPMWPERIYQSSYGVTSVDFSNSSPNLLAVGYHNGTVAIYNVQSSHNIPVLDSSESPQKHLGPVWQVQWIEQDRGTTGDDKREILVSISADGRISKWIIRKGLDCHDLMRLKRTTATGGKKGGEKEKKGEALISRQAPGMCFAFHPKDTNIYLAGTEEGLIHKCSCSYNEQYLETYRGHKGPVYKVTWNPFCPDVFLSCSADWGVMIWHQDTVKPFLSFYPTTYVVYDVSWSPKSAYIFAAANENRVEIWDLQISTLDPLIVNVANPGIKFTTVLFAKETDCLLVGDSDGQVAVYELRNMPTASDTSRGDVINILLGPKTNHTG", "length": 807 }, "evidence": [ { "id": "I3LB78", "url": "https://omabrowser.org/oma/group/I3LB78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1QHZ6-1", "protein_name": "Dynein axonemal intermediate chain 4", "gene_name": "dnai4", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSNTTVTQKRRTLKVAKSSKTLNVSSGVFRPNQSTTKSINPLFSGKSFGSTGDSKVVDKISAQTPKHTAMVVDENGQDVTPHPLYNPDPGVLQSKQGKVFTALDTSLTTMTEFPSIAFQTTNASLTGPFTRSFFGSASASRISQTAESVTDETKDLLVKQDLSNSISDIQSHREEPKEQLRENILDSTANCYLSETETIWLLDIPAVSVSVESEDAEAVKERNNAYTELCKNRQGNDKYVERSMQTFSDASKTKEVQCDSITMVDKAVMCTVWDMYDSFNNISDVSANTVVSSERHEATIPESSSEGHLVHPKRSNQSLSVVSTVSTVSGSSTHIEKMACVLPLDEEPDLQLILQSDKLKQDLALMERVVLANVFQPKLAAYRQLPIIEDPDCVQMVMEEESWTEQSKNSHCPFLERLWDFSCELTMGRNVSCMVWNKKNPDLLAVGYGQVEFKNPNSGLVCCWSLKNPTWPDRVFHCESGVTALDFSASNANQLAVGMYDGTIAIYNVQTSEQTPITDSSDCANLHTSPVWQLTWIDHEDGLAADKGEILVSVSSDGRISKWIHYKSMECVDLMKLKIHDLQWKRHISSLTPGMCFDFHPNDSKIYLVGTEEGHIHKCSSSYNEQYLESYKAHKRPVYKVTWSPFCSDVFLSCSSDWTIQLWRQDLQIPVMGFTSGQRVVFDIMWSPHCATVFGAVSEGKVEIWDLRVSSLDPTLVNWTSPGVNPTALLFSPETDCVLVGDSEGQVTVYKLKNITAGGGSQGETLEDVIQSTLSSQH", "length": 778 }, "evidence": [ { "id": "I3LB78", "url": "https://omabrowser.org/oma/group/I3LB78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q4V8G4-1", "protein_name": "Dynein axonemal intermediate chain 4", "gene_name": "Dnai4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPSSPTSTRKQTNFTASVSAQSRKSISFGNPKSTGGKGYAGANQSKIVASRTMTFLPEMKPAEKLNIASAKLVQVLDPRGVDVTPRPLYHPDPHAMPTKPSKLLTSQEGSMGSDYISSYSLYQNTLNPSMLGQYTRSVIGSSSTVSKSSISTTESMTEDLEDPSYKRDRLASFADVRVMRAPAEAAITKEELERNVEIFLMETETLRFFDLPTVMISTDSEEAEKVIEKNINYEILCRNRLGNDLYVERMMQTFNGAPKNKDVQCDKIIMEEKGVMATTWDLYDSFNIPEASLAAKRSAYLSKASLLVRDRDPKIQDSESSSLMDIESVILAKSHEDEEDNSEKILKSDKLHQDLFYMERVLMENVFQPKLAAYRQLPIYKELEPGQPEEDLQVVNKVTEDEVKKDEEEEMETELEIEITTEQSTIPANLERLWSFSCDLTKGLNVSSLSWNKANSDLLAVGYGNFGFKEQKRGMACCWSIKNPMWPERIYQSPYGVTSVDFSISSPNLLAVGYHNGTVAIYNVQSNHNTPVLDSSESPQKHLGPVWQVQWIEQDRGTTGDDRREILVSISADGRISKWVIRKGLDCHDLMHLKRTTVTSSKKGIEKEKKGEALISRQAPGMCFAFHTKDTNIYLAGTEEGLIHKCSCSYNEQYLETYRGHKGPVYKVTWNPFCPDVFLSCSADWGVMIWHQDNVKPFFTFYPTTYVVYDVAWSPKSAYIFAAANENRVEIWDLQISTLDPLIVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTPTESGRGDVINVLLGPKAN", "length": 803 }, "evidence": [ { "id": "I3LB78", "url": "https://omabrowser.org/oma/group/I3LB78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5VTH9-1", "protein_name": "Dynein axonemal intermediate chain 4", "gene_name": "DNAI4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTPGKHSGASARAANGGAWGYRDFRGGQKKGWCTTPQLVATMPVSPAGSHKQQNFGLNNATQPKKSISFFATMKATSVKGYTGANQSRMAVSKTVLIPPELKTVEKPNPNIKTTQVFDINGTDVTPRPLYHPDPLTGTAKPSKLLTSQEGSLGSEFISSYSLYQNTINPSTLGQFTRSVLGSSTVSKSSVSASESIAEDLEEPSYKRERLTSFTDLQVIRAAPEKIVTKEDLEKNIEIILTETETLRFFDLPTVMVSVESEEAEKVTQRNKNYEVLCRNRLGNDLYVERMMQTFNGAPKNKDVQCDKIIMEDKGIMSTAWDLYDSYNAMELVSLSVKQSVVESSSKANVLPKDQDQRLPGSTTEKNSETSSLMDIENVILAKIHEDEEDHSDAILKSDKFHQDLFFMERVLMENIFQPKLAAYRQLPVLKEPEPEEPEDVLESAKHEEVEEESKKEEEEEIHAEESTIPANLERLWSFSCDLTKGLNVSSLAWNKTNPDLLAVGYGHFGFKEQKRGLACCWSIKNPMWPERIYQSPYGVTAVDFSIGAPNLLAVGYHNGTIAIYNVRSNSNVPVLDSSESPQKHLGPVWQLQWIEQDRGTTGDGKREILVSISADGRISKWVIRKGLDCYDLMRLKRTTAASNKKGGEKEKKDEALISRQAPGMCFAFHPKDTNIYLAGTEEGHIHKCSCSYNEQYLDTYRGHKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYIFAAANENRVEIWDLHISTLDPLIVNTANPGIKFTTILFAKQTDCLLVGDSDGQVSVYELRNMPTVLETGRGDIMDTLLGSKSNQSA", "length": 848 }, "evidence": [ { "id": "I3LB78", "url": "https://omabrowser.org/oma/group/I3LB78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W0U9-1", "protein_name": "Dynein axonemal intermediate chain 4", "gene_name": "Dic61B", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSASVRNTVTSQENGSIFKRSSNLDNELKKKSVVVNQTQAEESKAKKKDTTHYYSVETLADLQYRSQIKVLEKIYGEEVDMTPKSIQDDTYVEQFMKYNLNVMHQMTNFTTMVAKSTTRSRTRSSVRAGIGGNKQSIDDLMNGILYETINWEPYSTVEALEEAYEPKPYTKSFLKITLRKSDFFEIHSQTQTTVAKGSPEGDDAERDNRNYEYLTIGKGKIRRRSDNDAQTDTLLFTTRAVNTILITKATVSSYVSNFEMYDTLNNITKEFATATMSSVKDLTSALAQTEDADTFEDDEAVAEKDKVSSQIERLFRSPEFRNAIMYMGRTLSSNTNEAGLRRFRNFDQVERWNAEAEYVYSMNLLFRLVPEPSKDERKAVSDIDFCRSNGDILAVAYGLYSFSSQHVPTSGSVFLWSIKNPGEPERAYYYDVPVTAINFSPFLPSLLAIGLYDGSVEVRDVSSLQDTPVAVSQRSTSPGSSPVVAIRWIKQVSDDDHETDIDPFLSLSQDGSVTRFRIIKSPFLLGFTQMILERVEGHPEGIFVHPSSRIPCESNRHPQGLSITTHPLHKDIYYVLTDEGCIHKCSINYQHQYLEVLRCHDGGVTVMEFSPWSPKLFLTCGNDWFVRIWVDGITRPLLELLDEMTPVHWAKWSPTHSTIIVTVNRETANVWDFRRNLLRPMSKHKMDSSFNTVARFSHCGRTLVIGNERGNTLFNALNDMPFSPHFQYDELEKAIFKAIGNDHELLMELKSIGFFGYPNKKAVF", "length": 764 }, "evidence": [ { "id": "I3LB78", "url": "https://omabrowser.org/oma/group/I3LB78/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "dynein axonemal particle", "id": "GO:0120293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120293", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "pmid": "" }, { "name": "motile cilium", "id": "GO:0031514", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031514", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "pmid": "" }, { "name": "axonemal dynein complex", "id": "GO:0005858", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005858", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cilium movement", "id": "GO:0003341", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003341", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "pmid": "" }, { "name": "axonemal dynein complex assembly", "id": "GO:0070286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070286", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "dynein light chain binding", "id": "GO:0045503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045503", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "pmid": "" }, { "name": "dynein heavy chain binding", "id": "GO:0045504", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045504", "evidence": [ { "database": "UniProtKB", "id": "I3LB78", "url": "https://www.uniprot.org/uniprotkb/I3LB78" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 285, "end_pos": 287, "annotation": "n_glycosylation_sequon" }, { "start_pos": 447, "end_pos": 449, "annotation": "n_glycosylation_sequon" }, { "start_pos": 454, "end_pos": 456, "annotation": "n_glycosylation_sequon" }, { "start_pos": 45, "end_pos": 47, "annotation": "n_glycosylation_sequon" }, { "start_pos": 518, "end_pos": 520, "annotation": "n_glycosylation_sequon" }, { "start_pos": 68, "end_pos": 70, "annotation": "n_glycosylation_sequon" }, { "start_pos": 727, "end_pos": 729, "annotation": "n_glycosylation_sequon" }, { "start_pos": 805, "end_pos": 807, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 285, "end_pos": 287 }, { "start_pos": 447, "end_pos": 449 }, { "start_pos": 454, "end_pos": 456 }, { "start_pos": 45, "end_pos": 47 }, { "start_pos": 518, "end_pos": 520 }, { "start_pos": 68, "end_pos": 70 }, { "start_pos": 727, "end_pos": 729 }, { "start_pos": 805, "end_pos": 807 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"length": 1025, "header": "tr|A0A287BP09-1|A0A287BP09_PIG Computationally mapped isoform of Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Sus scrofa OX=9823 GN=BUB1B PE=4 SV=1 CANONICAL=I3LEQ9-1" }, "locus": { "chromosome": "1", "start_pos": 131143594, "end_pos": 131093343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063679.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063679.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058158.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058158.1" } ] } }, { "isoform_ac": "I3LEQ9-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9/entry#I3LEQ9-1", "sequence": { "sequence": "MAAMQKGSGVPSEVTSLEGDEWELSKENVQPLRQGRIMSTLQGALAQQESTCNTTLQQQKRAFESEIRFYAGNDPLDVWDRYINWTEQNYPQGGKESNMSTLLERAIEALQGEKRYYNDPRFLSLWLKLGHLCNEPLDMYSYLHNQGIGISLAQFYISWAEEYEARENFKKADMIFQEGIQQKAEPMERLQSQHRHFQARVSRQTLLALEKEEDEAFGSSVPQRSTLAELKSKGKKTARVPISRVGGALKAPNQNRGLQNPVPQQMQSNSRITIFDENAEEASRAEASKPTVQPWIAPPIPRAKENELQAGPWNTGRPLEYRPRGNTASMTAVPSMLPSFTPYVEETAQQPVMTPCKIEPSINHILSTRKPGKEEADLLQRVQNHQQESEEKKEKIMYCKEKIYAGVGEFSFEEIRAEVFRKKLKEQREAELLTSAKKRAEMQKQIEEMEKKLKEIQTTQQERASDQQEEKMSTKETAELRIASESQEIPALSLSNSAYPVNACARETSLAENIWQEQPCSQSSSVPFSIFDEFLLSEKKTISPSADPPRVLAQRRPLAILKTLESITSNEDVSPDVCDEFTGIEPLSEDAIITGFRNVTICPNPEDTCDFARAAHFASTPFHEMICLKDLPSDSKRQLQEEDLDVKTSEDQQTACGTIYNPTLSIKKLSPIIEDSREATHSSGFSGSSASVTSTSSIKCLQIPEKLELTNETADGPPQSPWCSQYRRQLLKSLPELTASAEFFIEDRPMPNLEIEKEIELDNEDYCIIQEYLTCEDYKLFWVTPRNSAELTIIKVSSQPVLWDFYINLKLKERLNEECDNLCSCYQYQDGCIIWHQYINCFTIQDLLQHSEFITHEMTVLIIYNLLTIVEKLHKAEIVHGDLSPRSLILRNRIHDPYDCDKNNQALKIVDFSYSVDLRAQLDVFNLSGFRTVQILEGQKILANCSSPYQVDLFGIADLAHLLLFKEHLQVFWDGSLWKLSQNISELKDGELWNKFFVRILNASDESTVSVLRELAAEMNGVFDTTFQSHLNKALWKVGTLISPGALLFQQDRQSSLSQIPA", "length": 1062, "header": "tr|I3LEQ9-1|I3LEQ9_PIG Isoform 1 of Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Sus scrofa OX=9823 GN=BUB1B PE=4 SV=3 CANONICAL=I3LEQ9-1" }, "locus": { "chromosome": "1", "start_pos": 131143594, "end_pos": 131093343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031444.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031444.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022548.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022548.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102164975", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102164975", "resource": "KEGG Pathway" }, { "id": "R-SSC-141430", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "resource": "Reactome", "description": "Inactivation of APC/C via direct inhibition of the APC/C complex" }, { "id": "R-SSC-141444", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141444", "resource": "Reactome", "description": "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" }, { "id": "R-SSC-174184", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174184", "resource": "Reactome", "description": "Cdc20:Phospho-APC/C mediated degradation of Cyclin A" }, { "id": "R-SSC-176409", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176409", "resource": "Reactome", "description": "APC/C:Cdc20 mediated degradation of mitotic proteins" }, { "id": "R-SSC-179409", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-179409", "resource": "Reactome", "description": "APC-Cdc20 mediated degradation of Nek2A" }, { "id": "R-SSC-2467813", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467813", "resource": "Reactome", "description": "Separation of Sister Chromatids" }, { "id": "R-SSC-2500257", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2500257", "resource": "Reactome", "description": "Resolution of Sister Chromatid Cohesion" }, { "id": "R-SSC-5663220", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663220", "resource": "Reactome", "description": "RHO GTPases Activate Formins" }, { "id": "R-SSC-68877", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68877", "resource": "Reactome", "description": "Mitotic Prometaphase" }, { "id": "R-SSC-9648025", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648025", "resource": "Reactome", "description": "EML4 and NUDC in mitotic spindle formation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "outer kinetochore", "id": "GO:0000940", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000940", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "spindle", "id": "GO:0005819", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005819", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "mitotic spindle assembly checkpoint signaling", "id": "GO:0007094", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007094", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" }, { "name": "meiotic sister chromatid cohesion, centromeric", "id": "GO:0051754", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051754", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ9", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1002, "end_pos": 1004, "annotation": "n_glycosylation_sequon" }, { "start_pos": 53, "end_pos": 55, "annotation": "n_glycosylation_sequon" }, { "start_pos": 598, "end_pos": 600, "annotation": "n_glycosylation_sequon" }, { "start_pos": 711, "end_pos": 713, "annotation": "n_glycosylation_sequon" }, { "start_pos": 84, "end_pos": 86, "annotation": "n_glycosylation_sequon" }, { "start_pos": 926, "end_pos": 928, "annotation": "n_glycosylation_sequon" }, { "start_pos": 944, "end_pos": 946, "annotation": "n_glycosylation_sequon" }, { "start_pos": 983, "end_pos": 985, "annotation": "n_glycosylation_sequon" }, { "start_pos": 98, "end_pos": 100, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "46608", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/46608" } ] }, { "id": "R-SSC-141409", "name": "Mad1 binds kinetochore", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-141409", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141409" } ] }, { "id": "R-SSC-141422", "name": "MAD2 converted to an inhibitory state via interaction with Mad1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-141422", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141422" } ] }, { "id": "R-SSC-141423", "name": "Binding of the MCC complex to the APC/C complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-141423", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141423" } ] }, { "id": "R-SSC-141431", "name": "MAD2 associates with the Mad1 kinetochore complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-141431", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141431" } ] }, { "id": "R-SSC-141437", "name": "Formation of the MCC complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-141437", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141437" } ] }, { "id": "R-SSC-141439", "name": "Release of activated MAD2 from kinetochores", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-141439", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141439" } ] }, { "id": "R-SSC-1638803", "name": "Phosphorylation of cohesin by PLK1 at centromeres", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "chromosome, centromeric region, cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1638803", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1638803" } ] }, { "id": "R-SSC-1638821", "name": "PP2A-B56 dephosphorylates centromeric cohesin", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "chromosome, cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1638821", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1638821" } ] }, { "id": "R-SSC-174104", "name": "Ubiquitination of Cyclin A by APC/C:Cdc20 complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174104", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174104" } ] }, { "id": "R-SSC-174171", "name": "Association of Cyclin A with the APC/C", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174171", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174171" } ] }, { "id": "R-SSC-174238", "name": "Activation of APC/C:Cdc20 by dissociation of Cdc20:phospho-APC/C from Cdc20:phospho-APC/C:Mad2:Bub3:BubR1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174238", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174238" } ] }, { "id": "R-SSC-174255", "name": "Degradation multiubiquitinated Cyclin A", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-174255", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174255" } ] }, { "id": "R-SSC-179417", "name": "Multiubiquitination of Nek2A", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-179417", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-179417" } ] }, { "id": "R-SSC-179421", "name": "Degradation of multiubiquitinated Nek2A", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-179421", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-179421" } ] }, { "id": "R-SSC-2467809", "name": "ESPL1 (Separase) cleaves centromeric cohesin", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "chromosome, centromeric region, cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2467809", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467809" } ] }, { "id": "R-SSC-2467811", "name": "Separation of sister chromatids", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2467811", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467811" } ] }, { "id": "R-SSC-2468287", "name": "CDK1 phosphorylates CDCA5 (Sororin) at centromeres", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "chromosome, centromeric region, cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2468287", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2468287" } ] }, { "id": "R-SSC-2484822", "name": "Kinetochore assembly", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "chromosome, centromeric region, cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2484822", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2484822" } ] }, { "id": "R-SSC-375302", "name": "Kinetochore capture of astral microtubules", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-375302", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-375302" } ] }, { "id": "R-SSC-5666129", "name": "CDC42:GTP recruits DIAPH2-2 to kinetochores", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5666129", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5666129" } ] }, { "id": "R-SSC-5666160", "name": "AURKB phosphorylates DIAPH2-2 at kinetochores", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5666160", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5666160" } ] }, { "id": "R-SSC-5666169", "name": "Kinetochore capture of astral microtubules is positively regulated by CDC42:GTP:p-S196-DIAPH2-2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5666169", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5666169" } ] }, { "id": "R-SSC-9648114", "name": "EML4 recruits NUDC to mitotic spindle", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, spindle", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9648114", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648114" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LEQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" }, { "id": "PS51489", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51489" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BUB1 N-terminal", "eco_id": "ECO_0000259", "start_pos": 63, "end_pos": 226, "start_aa": "Phe", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LEQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEQ9" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 707, "end_pos": 1062, "start_aa": "Leu", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1002, "end_pos": 1004 }, { "start_pos": 53, "end_pos": 55 }, { "start_pos": 598, "end_pos": 600 }, { "start_pos": 711, "end_pos": 713 }, { "start_pos": 84, "end_pos": 86 }, { "start_pos": 926, "end_pos": 928 }, { "start_pos": 944, "end_pos": 946 }, { "start_pos": 983, "end_pos": 985 }, { "start_pos": 98, "end_pos": 100 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LJD2-1", "uniprot_ac": "I3LJD2", "uniprot_id": "I3LJD2_PIG", "mass": { "chemical_mass": 43942.0, "monoisotopic_mass": 43942.0 }, "refseq": {}, "gene_names": [ { "name": "LMAN2L", "type": "recommended", "evidence": [ { "id": "I3LJD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ] } ], "protein_names": [ { "name": "Lectin, mannose binding 2 like", "type": "synonym", "evidence": [ { "id": "I3LJD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LJD2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LMAN2L", "url": "https://www.uniprot.org/uniprotkb/I3LJD2", "locus": { "chromosome": "3", "start_pos": 56906710, "end_pos": 56879221, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026939", "url": "https://www.ensembl.org/id/ENSSSCG00000026939" } ] } } ], "crossref": [ { "id": "I3LJD2", "url": "https://alphafold.ebi.ac.uk/entry/I3LJD2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026939", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026939", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100627779", "url": "https://www.ncbi.nlm.nih.gov/gene/100627779", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GCSIDYR", "url": "https://omabrowser.org/oma/group/GCSIDYR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12223", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12223", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12223:SF20", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12223:SF20", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03388", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03388", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-204005", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204005", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5694530", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5694530", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BP10", "url": "https://www.uniprot.org/uniprotkb/A0A287BP10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BP10-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BP10-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VYN8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYN8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VYN8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYN8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F961", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F961", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F961-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F961-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F962", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F962", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F962-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F962-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJD2-1", "url": "https://www.uniprot.org/uniprotkb/I3LJD2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLTCRGGDSTKANGTGGRSFSGPMAWGTGRAFDEGSAVGKMAATLGPSGWWQRWWRRLSTRDGSRMLLLLLLLGSGQGPRQVGAGQTFEYLKREHSLSKPYQGVGTGSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFRIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY", "length": 388, "header": "tr|I3LJD2-1|I3LJD2_PIG Isoform 1 of Lectin, mannose binding 2 like OS=Sus scrofa OX=9823 GN=LMAN2L PE=1 SV=2 CANONICAL=I3LJD2-1" }, "isoforms": [ { "isoform_ac": "A0A287BP10-1", "url": "https://www.uniprot.org/uniprotkb/I3LJD2/entry#A0A287BP10-1", "sequence": { "sequence": "MQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY", "length": 210, "header": "tr|A0A287BP10-1|A0A287BP10_PIG Computationally mapped isoform of Lectin, mannose binding 2 like OS=Sus scrofa OX=9823 GN=LMAN2L PE=1 SV=1 CANONICAL=I3LJD2-1" }, "locus": { "chromosome": "3", "start_pos": 56901039, "end_pos": 56884103, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046459.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046459.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057823.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057823.1" } ] } }, { "isoform_ac": "A0A4X1VYN8-1", "url": "https://www.uniprot.org/uniprotkb/I3LJD2/entry#A0A4X1VYN8-1", "sequence": { "sequence": "MCSSPERVFMTGSGKHGVGTGSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFRIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQEAQKRRYSPGVQRVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY", "length": 313, "header": "tr|A0A4X1VYN8-1|I3LJD2_PIG Computationally mapped isoform of Lectin, mannose binding 2 like OS=Sus scrofa OX=9823 GN=LMAN2L PE=1 SV=1 CANONICAL=I3LJD2-1" }, "locus": { "chromosome": "3", "start_pos": 56901039, "end_pos": 56880543, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065619.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065619.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034793.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034793.1" } ] } }, { "isoform_ac": "A0A8W4F961-1", "url": "https://www.uniprot.org/uniprotkb/I3LJD2/entry#A0A8W4F961-1", "sequence": { "sequence": "MGMAWRSGTQRIGCSQAQKRRYSPGVQRVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY", "length": 206, "header": "tr|A0A8W4F961-1|I3LJD2_PIG Computationally mapped isoform of Lectin, mannose binding 2 like OS=Sus scrofa OX=9823 GN=LMAN2L PE=1 SV=1 CANONICAL=I3LJD2-1" }, "locus": { "chromosome": "3", "start_pos": 56901039, "end_pos": 56884065, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106793.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106793.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075819.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075819.1" } ] } }, { "isoform_ac": "A0A8W4F962-1", "url": "https://www.uniprot.org/uniprotkb/I3LJD2/entry#A0A8W4F962-1", "sequence": { "sequence": "MGMAWRSGTQRIGCSQRVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY", "length": 195, "header": "tr|A0A8W4F962-1|I3LJD2_PIG Computationally mapped isoform of Lectin, mannose binding 2 like OS=Sus scrofa OX=9823 GN=LMAN2L PE=1 SV=1 CANONICAL=I3LJD2-1" }, "locus": { "chromosome": "3", "start_pos": 56901039, "end_pos": 56884065, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100239.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100239.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075933.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075933.1" } ] } }, { "isoform_ac": "I3LJD2-1", "url": "https://www.uniprot.org/uniprotkb/I3LJD2/entry#I3LJD2-1", "sequence": { "sequence": "MLTCRGGDSTKANGTGGRSFSGPMAWGTGRAFDEGSAVGKMAATLGPSGWWQRWWRRLSTRDGSRMLLLLLLLGSGQGPRQVGAGQTFEYLKREHSLSKPYQGVGTGSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFRIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY", "length": 388, "header": "tr|I3LJD2-1|I3LJD2_PIG Isoform 1 of Lectin, mannose binding 2 like OS=Sus scrofa OX=9823 GN=LMAN2L PE=1 SV=2 CANONICAL=I3LJD2-1" }, "locus": { "chromosome": "3", "start_pos": 56901039, "end_pos": 56879221, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032030.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032030.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024192.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024192.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VYN8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VYN8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-204005", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204005", "resource": "Reactome", "description": "COPII-mediated vesicle transport" }, { "id": "R-SSC-5694530", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5694530", "resource": "Reactome", "description": "Cargo concentration in the ER" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6G604-1", "protein_name": "Lectin, mannose-binding 2-like", "gene_name": "Lman2l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGGRAGGSAGQWVGPRGGLFDEGPAVGKMAAAPRPSWWQRWRRRAWARDGARLLLFLLLLGSGSGPGPLHVRAGQAVEYLKREHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLKDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQHEAQKRRYSPGVQRVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNIRYDTFLVIRYVKRHLTIMMDIDGRHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTGVRTPEEEKLHRDVFLPSVDNLKLPEMTEPPTPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQDHSRKRFY", "length": 388 }, "evidence": [ { "id": "I3LJD2", "url": "https://omabrowser.org/oma/group/I3LJD2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P59481-1", "protein_name": "VIP36-like protein", "gene_name": "Lman2l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAASRPSWWQRWRRRAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLKDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQHERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNIRYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTGVRTPEEEKLHRDVFLPSVDNLKLPEMTVPPTPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQDQSRKRFY", "length": 347 }, "evidence": [ { "id": "I3LJD2", "url": "https://omabrowser.org/oma/group/I3LJD2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q2HJD1-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVALGPSGWWQRWRRRLSAREVSRMLLLLLLLGSGQGPRQVGAGQTFEYLKREHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFRIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQDQSRKRFY", "length": 348 }, "evidence": [ { "id": "I3LJD2", "url": "https://omabrowser.org/oma/group/I3LJD2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAATLGPLGSWQQWRRCLSARDGSRMLLLLLLLGSGQGPQQVGAGQTFEYLKREHSLSKPYQGVGTGSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTVERTPEEEKLHRDVFLPSVDNMKLPEMTAPLPPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY", "length": 348 }, "evidence": [ { "id": "I3LJD2", "url": "https://omabrowser.org/oma/group/I3LJD2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" }, { "name": "COPII-coated ER to Golgi transport vesicle", "id": "GO:0030134", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030134", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" }, { "name": "endoplasmic reticulum-Golgi intermediate compartment", "id": "GO:0005793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005793", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" }, { "name": "D-mannose binding", "id": "GO:0005537", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005537", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "I3LJD2", "url": "https://www.uniprot.org/uniprotkb/I3LJD2" } ], "pmid": "" }, { "name": "endoplasmic reticulum to Golgi vesicle-mediated 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LLP4-1", "uniprot_ac": "I3LLP4", "uniprot_id": "I3LLP4_PIG", "mass": { "chemical_mass": 53425.0, "monoisotopic_mass": 53425.0 }, "refseq": { "ac": "XP_013837163", "name": "E3 ubiquitin-protein ligase TRAIP isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837163" }, "gene_names": [ { "name": "TRAIP", "type": "recommended", "evidence": [ { "id": "I3LLP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ] }, { "name": "TRAIP", "type": "synonym", "evidence": [ { "id": "XP_013837163", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837163" } ] } ], "protein_names": [ { "name": "E3 ubiquitin-protein ligase TRAIP", "type": "recommended", "evidence": [ { "id": "I3LLP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLP4/entry#names_and_taxonomy" } ] }, { "name": "2.3.2.27", "type": "synonym", "evidence": [ { "id": "I3LLP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLP4/entry#names_and_taxonomy" } ] }, { "name": "E3 ubiquitin-protein ligase TRAIP isoform X1", "type": "synonym", "evidence": [ { "id": "XP_013837163", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837163" } ] }, { "name": "TRAF-interacting protein", "type": "synonym", "evidence": [ { "id": "I3LLP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLP4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TRAIP", "url": "https://www.uniprot.org/uniprotkb/I3LLP4", "locus": { "chromosome": "13", "start_pos": 32345599, "end_pos": 32379766, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026977", "url": "https://www.ensembl.org/id/ENSSSCG00000026977" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026977", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026977", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16480", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16480", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100626110", "url": "https://www.ncbi.nlm.nih.gov/gene/100626110", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052639", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052639", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100626110", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626110", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RSKYIQP", "url": "https://omabrowser.org/oma/group/RSKYIQP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LLP4", "url": "https://www.orthodb.org/?gene=I3LLP4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46569", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46569", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46569:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46569:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13639", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13639", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013837163", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837163", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1SQ09", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SQ09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1SQ09-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SQ09-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1G0D5", "url": "https://www.uniprot.org/uniprotkb/A0A8D1G0D5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1G0D5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1G0D5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLP4-1", "url": "https://www.uniprot.org/uniprotkb/I3LLP4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEESVLDAEFLKNELDNTRALLSQKEKEKRDSQIIIDTLRDTLEERNATVESLQKALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARRLRSKMKTMERIELLLQSQRPEVEEMIREMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELTDKLKKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEILSLKKKLMMLQETLNLPPVDSETVNRLVLESPAPVEMLNLKLHRPAFGDDIDLNATFNVDTPPSQPSSIQHGRAKRLFPEEAHSPVQDVPKKMPQGAKQESQLSLGGQRCLGEPDEELADAFPVFIRNAVLGQKQPKRARAEPCRSTDAVRTGFDGLGGRTKFIQPTDTTMIRPLPTKLKLKARAKQRVAARTVLPPSQAKLDSFLS", "length": 471, "header": "tr|I3LLP4-1|I3LLP4_PIG Isoform 1 of E3 ubiquitin-protein ligase TRAIP OS=Sus scrofa OX=9823 GN=TRAIP PE=3 SV=2 CANONICAL=I3LLP4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1SQ09-1", "url": "https://www.uniprot.org/uniprotkb/I3LLP4/entry#A0A4X1SQ09-1", "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEESVLDAEFLKLQTVYSELDQAKLELKSAQKDLQSADKEILSLKKKLMMLQETLNLPPVDSETVNRLVLESPAPVEMLNLKLHRPAFGDDIDLNATFNVDTPPSQPSSIQHGRAKRLFPEEAHSPVQDVPKKMPQGAKQESQLSLGGQRCLGEPDEELADAFPVFIRNAVLGQKQPKRARAEPCRSTDAVRTGFDGLGGRTKFIQPVSLFCGIRLS", "length": 285, "header": "tr|A0A4X1SQ09-1|A0A4X1SQ09_PIG Computationally mapped isoform of E3 ubiquitin-protein ligase TRAIP OS=Sus scrofa OX=9823 GN=TRAIP PE=3 SV=1 CANONICAL=I3LLP4-1" }, "locus": { "chromosome": "13", "start_pos": 32379639, "end_pos": 32347089, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090840.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090840.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069738.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069738.1" } ] } }, { "isoform_ac": "A0A8D1G0D5-1", "url": "https://www.uniprot.org/uniprotkb/I3LLP4/entry#A0A8D1G0D5-1", "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEESVLDAEFLKNELDNTRALLSQKEKEKRDSQIIIDTLRDTLEERNATVESLQKALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARRLRSKMKTMERIELLLQSQRPEVEEMIREMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELTDKLKKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEILSLKKKLMMLQETLNLPPVDSETVNRLVLESPAPVEMLNLKLHRPAFGDDIDLNATFNVDTPPSQPSSIQHGRAKRLFPEEAHSPVQDVPKKMPQGAKQESQLSLGGQRCLGEPCRSTDAVRTGFDGLGGRTKFIQPTDTTMIRPLPTKLKLKARAKQRVAARTVLPPSQAKLDSFLS", "length": 442, "header": "tr|A0A8D1G0D5-1|I3LLP4_PIG Computationally mapped isoform of E3 ubiquitin-protein ligase TRAIP OS=Sus scrofa OX=9823 GN=TRAIP PE=3 SV=1 CANONICAL=I3LLP4-1" }, "locus": { "chromosome": "13", "start_pos": 32379639, "end_pos": 32346100, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080098.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080098.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072322.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072322.1" } ] } }, { "isoform_ac": "I3LLP4-1", "url": "https://www.uniprot.org/uniprotkb/I3LLP4/entry#I3LLP4-1", "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEESVLDAEFLKNELDNTRALLSQKEKEKRDSQIIIDTLRDTLEERNATVESLQKALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARRLRSKMKTMERIELLLQSQRPEVEEMIREMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELTDKLKKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEILSLKKKLMMLQETLNLPPVDSETVNRLVLESPAPVEMLNLKLHRPAFGDDIDLNATFNVDTPPSQPSSIQHGRAKRLFPEEAHSPVQDVPKKMPQGAKQESQLSLGGQRCLGEPDEELADAFPVFIRNAVLGQKQPKRARAEPCRSTDAVRTGFDGLGGRTKFIQPTDTTMIRPLPTKLKLKARAKQRVAARTVLPPSQAKLDSFLS", "length": 471, "header": "tr|I3LLP4-1|I3LLP4_PIG Isoform 1 of E3 ubiquitin-protein ligase TRAIP OS=Sus scrofa OX=9823 GN=TRAIP PE=3 SV=2 CANONICAL=I3LLP4-1" }, "locus": { "chromosome": "13", "start_pos": 32379639, "end_pos": 32346100, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072035.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072035.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068840.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068840.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1G0D5", "url": "https://www.uniprot.org/uniprotkb/A0A8D1G0D5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626110", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626110", "resource": "KEGG Pathway" }, { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A3M7-1", "protein_name": "TRAF interacting protein", "gene_name": "TRAIP", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPIRAHCTICSDFFDNARDVAAVPCGHTFHRACLFQWFDTAPSRTCPQCRIQVSKRHIISKLFFDVALEEQTALDAETLQPGSLLKQNQISIQLLLLHWVSKLLSAVVWECDFRAFAKTHVRKSAEFSDLLQNELDKVKAQLSMKEKEKRECQAIVDGLRDTLDVRNATIESLQKVLGETEMLCSSLKKQMKFLEQQQEDNRSSKEEARRLRNKLKTMERIELLLQSQRPEVEEMIREMGVGQAAVEQLAVYCVSLKKEYENLKEARKISSEMTEKQKKELFFVNSKLQKTVSELEKTKEELKSTQKDLKNADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPTPVELQQPKLHRPAHSDEINLDDSFDVDTPENQPCRSPFSAAKRQKLDKKRPPVVNLAKKALKETVENWGDDLEDETLKGFLPAFIRNSVFSKKPVSGSLLGPHRNVGKVRMGYDGLGGRTKFIQPTSPTELRPIAVKSKRNVSRPASAAAPERPCSSSRASLDAFLQ", "length": 516 }, "evidence": [ { "id": "I3LLP4", "url": "https://omabrowser.org/oma/group/I3LLP4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B1WC52-1", "protein_name": "E3 ubiquitin-protein ligase TRAIP", "gene_name": "Traip", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKKTIINKLFFDLAQEEESVLDAEFLKNELDSIKAQLSQKDREKRDSQAIIDTLRDTLEERNATVESLQNALNKAEMLCSTLKKQMKFLEQQRDETKHAQEEARQLKSKMKTMEQIELLLQSQRSEVEEMIRDMGVGQSAVEQLAVYCISLKKEYENLKEARKASGELADRLRKDLASSRSKLKTVNTELDQAKLELRSAQKDLQSADKEITSLRKKLTILQGTLSLPPVTSETVSRLVFESPAPVEMLKPRLHRPPFSDEIDLNATFDVNTPPAQTSSSQHCHPKKLCLERARSPMQDILKIPKVSKSESQLSLGGQRCVGEPDEELAGAFPLFIRNAVRGQKQPNRTTAESRYSTDVVRIGFDGLGGRTKFIQPTDPTIIRPMPVKPKAKSKQKVRIKTVNSASQPKLDTFLCQ", "length": 469 }, "evidence": [ { "id": "I3LLP4", "url": "https://omabrowser.org/oma/group/I3LLP4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3H8D9-1", "protein_name": "E3 ubiquitin-protein ligase TRAIP isoform X1", "gene_name": "Traip", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKKAIINKLFFDLAQEEEGVLDAEFLKNELDSIRAQLSQKEREKRDSQTIIDTLRDTLEERNATVESLQNALDKTEMLCSTLKKQMKFLEQQQDETKQAQEEARQLKSKMKTMERIELLLQSQRSEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLKKDLATSKSKLKAVYTELDQAKLELRSTQKDLQSADKEITSLRKKLKMLQETLNLPPVTSETVSRLVFESPAPVEMLHPRLHRPSISDEIDLNATFDVVTPPAQPSSSQHGHPKKLSLERARSPVQDVLKKIPKVSKQEPQLSLGGQRCIGEPDEELAGAFPLFIRNAIRGQKQPNRTTADSRCSTDVVRIGFDGLGGRTKFIQPTDTAIFRPMPVKPKAKSKQKVRIKTVNSSSQPKMDTFLLQ", "length": 470 }, "evidence": [ { "id": "I3LLP4", "url": "https://omabrowser.org/oma/group/I3LLP4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8VIG6-1", "protein_name": "E3 ubiquitin-protein ligase TRAIP", "gene_name": "Traip", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKKTIINKLFFDLAQEEENVLDAEFLKNELDSVKAQLSQKDREKRDSQAIIDTLRDTLEERNATVESLQNALNKAEMLCSTLKKQMKFLEQRQDETKQAREEAHRLKCKMKTMEQIELLLQSQRSEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKATGELADRLKKDLVSSRSKLKTLNTELDQAKLELRSAQKDLQSADQEITSLRKKLMILQGTLSLPPATNETVSRLVFESPAPVEMMNPRLHQPPFGDEIDLNTTFDVNTPPTQTSGSQHCLPKKLCLERARSPMQNVLKKVHKVSKPESQLSLGGQRCVGELDEELAGAFPLFIRNAVLGQKQPNRTTAESRCSTDVVRIGFDGLGGRTKFIQPRDTTIIRPVPVKSKAKSKQKVRIKTVSSASQPKLDTFLCQ", "length": 470 }, "evidence": [ { "id": "I3LLP4", "url": "https://omabrowser.org/oma/group/I3LLP4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BWF2-1", "protein_name": "E3 ubiquitin-protein ligase TRAIP", "gene_name": "TRAIP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEENVLDAEFLKNELDNVRAQLSQKDKEKRDSQVIIDTLRDTLEERNATVVSLQQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGEVADKLRKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEIMSLKKKLTMLQETLNLPPVASETVDRLVLESPAPVEVNLKLRRPSFRDDIDLNATFDVDTPPARPSSSQHGYYEKLCLEKSHSPIQDVPKKICKGPRKESQLSLGGQSCAGEPDEELVGAFPIFVRNAILGQKQPKRPRSESSCSKDVVRTGFDGLGGRTKFIQPTDTVMIRPLPVKPKTKVKQRVRVKTVPSLFQAKLDTFLWS", "length": 469 }, "evidence": [ { "id": "I3LLP4", "url": "https://omabrowser.org/oma/group/I3LLP4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "site of DNA damage", "id": "GO:0090734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090734", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "negative regulation of tumor necrosis factor-mediated signaling pathway", "id": "GO:0010804", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010804", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "negative regulation of interferon-beta production", "id": "GO:0032688", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032688", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "replication fork processing", "id": "GO:0031297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031297", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "I3LLP4", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 115, "end_pos": 117, "annotation": "n_glycosylation_sequon" }, { "start_pos": 318, "end_pos": 320, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-983140", "name": "Transfer of Ub from E2 to substrate and release of E2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983140", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983140" } ] }, { "id": "R-SSC-983147", "name": "Release of E3 from polyubiquitinated substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983147", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983147" } ] }, { "id": "R-SSC-983156", "name": "Polyubiquitination of substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983156", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983156" } ] }, { "id": "R-SSC-983157", "name": "Interaction of E3 with substrate and E2-Ub complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983157", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983157" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LLP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLP4" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 50, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 115, "end_pos": 117 }, { "start_pos": 318, "end_pos": 320 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LD22-1", "uniprot_ac": "I3LD22", "uniprot_id": "I3LD22_PIG", "mass": { "chemical_mass": 59713.0, "monoisotopic_mass": 59713.0 }, "refseq": { "ac": "XP_020955555", "name": "cochlin", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955555" }, "gene_names": [ { "name": "COCH", "type": "recommended", "evidence": [ { "id": "I3LD22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ] }, { "name": "COCH", "type": "synonym", "evidence": [ { "id": "XP_020955555", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955555" } ] } ], "protein_names": [ { "name": "Cochlin", "type": "recommended", "evidence": [ { "id": "I3LD22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD22/entry#names_and_taxonomy" } ] }, { "name": "cochlin", "type": "synonym", "evidence": [ { "id": "XP_020955555", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955555" } ] } ], "function": [ { "annotation": "Plays a role in the control of cell shape and motility in the trabecular meshwork.", "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22#function" }, { "database": "UniProtKB", "id": "ARBA00003388", "url": "https://www.uniprot.org/uniprotkb/ARBA00003388#function" }, { "database": "UniProtKB", "id": "A0A4X1SYC8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SYC8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "COCH", "url": "https://www.uniprot.org/uniprotkb/I3LD22", "locus": { "chromosome": "7", "start_pos": 68576153, "end_pos": 68594077, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022679", "url": "https://www.ensembl.org/id/ENSSSCG00000022679" } ] } } ], "crossref": [ { "id": "ENSSSCG00000022679", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022679", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01472", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01472", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd01482", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01482", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624179", "url": "https://www.ncbi.nlm.nih.gov/gene/100624179", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002035", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002035", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036609", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036609", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050525", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050525", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624179", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624179", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NFHLMLG", "url": "https://omabrowser.org/oma/group/NFHLMLG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LD22", "url": "https://www.orthodb.org/?gene=I3LD22", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24020", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24020", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24020:SF36", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24020:SF36", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00092", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00092", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03815", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03815", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020955555", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955555", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1SYC8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SYC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1SYC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SYC8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LD22-1", "url": "https://www.uniprot.org/uniprotkb/I3LD22-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAAWIPVLCLGVCLLLLLPEPAGSEGAVPIPITCFTRGLDIRKEQADVLCPGGCLLEEFSVFGNIVYASVSSVCGAAVHRGVISNSGGPVRIYSLPGRENYSSVVANGIQSQTLSRWSASFTVTKGKSGTQEATGQAVSTARPATGKRLKKTPEKKTGNKDCKADIAFLIDGSFNIGQRRFNLQKNFVGKVALMLGIGTEGPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIKEVGFRGGNSNTGKALKHTAQKFFTAETGVRKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFIVSVAKPIPEELGMVQDVAFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIGAKIAAVQFTYDQRTEFSFTDYSTKENVLAVIRNIRYMSGGTATGDAISFTVRNVFGPVRESPNKNFLVIVTDGQSYDDVRGPAAAAHDAGITIFSVGVAWAPLDDLKDMASKPKESHAFFTREFTGLEPIVSDVIRGICRDFLESQQ", "length": 551, "header": "tr|I3LD22-1|I3LD22_PIG Isoform 1 of Cochlin OS=Sus scrofa OX=9823 GN=COCH PE=1 SV=2 CANONICAL=I3LD22-1" }, "isoforms": [ { "isoform_ac": "A0A4X1SYC8-1", "url": "https://www.uniprot.org/uniprotkb/I3LD22/entry#A0A4X1SYC8-1", "sequence": { "sequence": "MSAAWIPVLCLGVCLLLLLPEPAGSEGAVPIPITCFTRGLDIRKEQADVLCPGGCLLEEFSVFGNIVYASVSSVCGAAVHRGVISNSGGPVRIYSLPGRENYSSVVANGIQSQTLSRWSASFTVTKGKSGTQEATGQAVSTARPATGKRLKKTPEKKTGNKDCKADIAFLIDGSFNIGQRRFNLQKNFVGKVALMLGIGTEGPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIKEVGFRGGNSNTGKALKHTAQKFFTAETGVRKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFIVSVAKPIPEELGMVQDVAFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIGAKIAAVQFTYDQRTEFSFTDYSTKENVLAVIRNIRYMSGGTATGDAISFTVRNVFGPVRESPNKNFLVIVTDGQSYDDVRGPAAAAHDAAK", "length": 495, "header": "tr|A0A4X1SYC8-1|A0A4X1SYC8_PIG Computationally mapped isoform of Cochlin OS=Sus scrofa OX=9823 GN=COCH PE=1 SV=1 CANONICAL=I3LD22-1" }, "locus": { "chromosome": "7", "start_pos": 68592952, "end_pos": 68576156, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042632.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042632.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034223.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034223.2" } ] } }, { "isoform_ac": "I3LD22-1", "url": "https://www.uniprot.org/uniprotkb/I3LD22/entry#I3LD22-1", "sequence": { "sequence": "MSAAWIPVLCLGVCLLLLLPEPAGSEGAVPIPITCFTRGLDIRKEQADVLCPGGCLLEEFSVFGNIVYASVSSVCGAAVHRGVISNSGGPVRIYSLPGRENYSSVVANGIQSQTLSRWSASFTVTKGKSGTQEATGQAVSTARPATGKRLKKTPEKKTGNKDCKADIAFLIDGSFNIGQRRFNLQKNFVGKVALMLGIGTEGPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIKEVGFRGGNSNTGKALKHTAQKFFTAETGVRKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFIVSVAKPIPEELGMVQDVAFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIGAKIAAVQFTYDQRTEFSFTDYSTKENVLAVIRNIRYMSGGTATGDAISFTVRNVFGPVRESPNKNFLVIVTDGQSYDDVRGPAAAAHDAGITIFSVGVAWAPLDDLKDMASKPKESHAFFTREFTGLEPIVSDVIRGICRDFLESQQ", "length": 551, "header": "tr|I3LD22-1|I3LD22_PIG Isoform 1 of Cochlin OS=Sus scrofa OX=9823 GN=COCH PE=1 SV=2 CANONICAL=I3LD22-1" }, "locus": { "chromosome": "7", "start_pos": 68592952, "end_pos": 68580939, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025682.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025682.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021950.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021950.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624179", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624179", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LZM1-1", "protein_name": "Cochlin", "gene_name": "COCH", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MWASWIPVLCLGVCLLLPPEPVGSEGAVPIPITCSTRGLDIRKEKADVLCPGGCPLEEFSVFGHIVYASVSSICGAAVHRGVIGHSGGPVRIYSLPGRENYSSVVANGIQSQMLSRWSASFTVTKGKSGTQEATGQAVSTAHPATGKRLKKTPEKKTGNKDCKADIAFLIDGSFNIGQRRFNLQKNFVGKVALMLGIGTEGPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIKEVAFRGGNSNTGKALKHTAQKFFTADTGARKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFIVSVAKPIPEELGMVQDVAFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGESNFRLMLEFVSNIAKTFEISDIGAKIAAVQFTYDQRTEFSFTDYSTKENVLAVIRNISYMSGGTATGDAISFTVRNVFGPVRDSPNKNFLVIVTDGQSYDDVRGPAAAAHDAGITIFSVGVAWAPLDDLKDMASKPKESHAFFTREFTGLEPIVSDVIRGICRDFLESQQ", "length": 550 }, "evidence": [ { "id": "I3LD22", "url": "https://omabrowser.org/oma/group/I3LD22/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0M8U6-1", "protein_name": "Cochlin", "gene_name": "Coch", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPSSWSPALCLGAWLLLLLLPRLARAEGAGELVPIPITCFTRGLDIRKEKADVLCPGGCSLEEFSVFGNIVYASVSSICGAAVHRGVIGTSGGPVRVYSLPGRENYSSVAANGIQSQTLSRWSASFAVTKGKSSTQEATGRAVSTANPPSGKRLKKTPEKKTGNKDCKADIAFLIDGSFNIGQRRFNLQKNFVGKVALMLGVGTEGPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIKEVGFRGGNSNTGKALKHTAQKFFTADTGVRKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFIVSVAKPIPEELGMVQDVAFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIGAKIAAVQFTYDQRTEFSFTDYNTKENVLAVLANIRYMSGGTATGDAISFTVRNVFGPIRDSPNKNFLVIVTDGQSYDDVRGPAAAAHDAGITIFSVGVAWAPLDDLKDMASKPKESHAFFTREFTGLEPIVSDVIRGICRDFLESQQ", "length": 555 }, "evidence": [ { "id": "I3LD22", "url": "https://omabrowser.org/oma/group/I3LD22/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O43405-1", "protein_name": "Cochlin", "gene_name": "COCH", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSAAWIPALGLGVCLLLLPGPAGSEGAAPIAITCFTRGLDIRKEKADVLCPGGCPLEEFSVYGNIVYASVSSICGAAVHRGVISNSGGPVRVYSLPGRENYSSVDANGIQSQMLSRWSASFTVTKGKSSTQEATGQAVSTAHPPTGKRLKKTPEKKTGNKDCKADIAFLIDGSFNIGQRRFNLQKNFVGKVALMLGIGTEGPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIKEVGFRGGNSNTGKALKHTAQKFFTVDAGVRKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFIVSVAKPIPEELGMVQDVTFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIGAKIAAVQFTYDQRTEFSFTDYSTKENVLAVIRNIRYMSGGTATGDAISFTVRNVFGPIRESPNKNFLVIVTDGQSYDDVQGPAAAAHDAGITIFSVGVAWAPLDDLKDMASKPKESHAFFTREFTGLEPIVSDVIRGICRDFLESQQ", "length": 550 }, "evidence": [ { "id": "I3LD22", "url": "https://omabrowser.org/oma/group/I3LD22/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q62507-1", "protein_name": "Cochlin", "gene_name": "Coch", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPSSRIPALCLGAWLLLLLLPRFARAEGAVPIPVTCFTRGLDIRKEKADVLCPGGCSLEEFSVFGNIVYASVSSICGAAVHRGVIGTSGGPVRVYSLPGRENYSSVDANGIQSQMLSRWSASFAVTKGKSSTQEATGRAVSTAHPPSGKRLKKTPEKKTGNKDCKADIAFLIDGSFNIGQRRFNLQKNFVGKVALMLGIGTEGPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIKEVGFRGGNSNTGKALKHTAQKFFTADTGVRKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFIVSVAKPIPEELGMVQDVAFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIGAKIAAVQFTYDQRTEFSFTDYNTKENVLAVLANIRYMSGGTATGDAIAFTVRNVFGPIRDSPNKNFLVIVTDGQSYDDVRGPAAAAHDAGITIFSVGVAWAPLDDLRDMASKPKESHAFFTREFTGLEPIVSDVIRGICRDFLESQQ", "length": 552 }, "evidence": [ { "id": "I3LD22", "url": "https://omabrowser.org/oma/group/I3LD22/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ], "pmid": "" }, { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "sensory perception of sound", "id": "GO:0007605", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007605", "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ], "pmid": "" }, { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "collagen binding", "id": "GO:0005518", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005518", "evidence": [ { "database": "UniProtKB", "id": "I3LD22", "url": "https://www.uniprot.org/uniprotkb/I3LD22" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 222, "end_pos": 224, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LD22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD22" }, { "id": "PS50820", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50820" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LCCL", "eco_id": "ECO_0000259", "start_pos": 29, "end_pos": 122, "start_aa": "Val", "end_aa": "Phe", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LD22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD22" }, { "id": "PS50234", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50234" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "VWFA", "eco_id": "ECO_0000259", "start_pos": 166, "end_pos": 351, "start_aa": "Asp", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 101, "end_pos": 103 }, { "start_pos": 222, "end_pos": 224 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC07-1", "uniprot_ac": "I3LC07", "uniprot_id": "I3LC07_PIG", "mass": { "chemical_mass": 22991.0, "monoisotopic_mass": 22991.0 }, "refseq": { "ac": "XP_003357800", "name": "ras-related protein Rab-18 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357800" }, "gene_names": [ { "name": "RAB18", "type": "recommended", "evidence": [ { "id": "I3LC07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ] }, { "name": "RAB18", "type": "synonym", "evidence": [ { "id": "XP_003357800", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357800" } ] } ], "protein_names": [ { "name": "Ras-related protein Rab-18", "type": "recommended", "evidence": [ { "id": "I3LC07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#names_and_taxonomy" } ] }, { "name": "3.6.5.2", "type": "synonym", "evidence": [ { "id": "I3LC07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#names_and_taxonomy" } ] }, { "name": "ras-related protein Rab-18 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003357800", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357800" } ] } ], "function": [ { "annotation": "The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. RAB18 is required for the localization of ZFYVE1 to lipid droplets and for its function in mediating the formation of endoplasmic reticulum-lipid droplets (ER-LD) contacts. Also required for maintaining endoplasmic reticulum structure. Plays a role in apical endocytosis/recycling. Plays a key role in eye and brain development and neurodegeneration.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QW88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QW88#function" }, { "database": "UniProtKB", "id": "ARBA00056467", "url": "https://www.uniprot.org/uniprotkb/ARBA00056467#function" }, { "database": "UniProtKB", "id": "A0A5G2QWD0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWD0#function" }, { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07#function" }, { "database": "UniProtKB", "id": "A0A4X1U5R3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U5R3#function" }, { "database": "UniProtKB", "id": "A0A5G2QJ69", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ69#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RAB18", "url": "https://www.uniprot.org/uniprotkb/I3LC07", "locus": { "chromosome": "10", "start_pos": 39004971, "end_pos": 38970586, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028655", "url": "https://www.ensembl.org/id/ENSSSCG00000028655" } ] } } ], "crossref": [ { "id": "I3LC07", "url": "https://alphafold.ebi.ac.uk/entry/I3LC07", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028655", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028655", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01863", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01863", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100620478", "url": "https://www.ncbi.nlm.nih.gov/gene/100620478", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001806", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001806", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025662", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025662", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050227", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050227", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620478", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620478", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RVHKMDV", "url": "https://omabrowser.org/oma/group/RVHKMDV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LC07", "url": "https://www.orthodb.org/?gene=I3LC07", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47977", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47977", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00071", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00071", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6798695", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6811436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8876198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003357800", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357800", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "19669", "url": "https://www.rhea-db.org/rhea/19669", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1U569", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U569", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U569-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U569-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U5R3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U5R3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U5R3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U5R3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ69", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ69", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ69-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ69-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUG2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUG2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUG2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUG2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QW88", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QW88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QW88-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QW88-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWD0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWD0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC07-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 206, "header": "tr|I3LC07-1|I3LC07_PIG Isoform 1 of Ras-related protein Rab-18 OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "isoforms": [ { "isoform_ac": "A0A4X1U569-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#A0A4X1U569-1", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 161, "header": "tr|A0A4X1U569-1|A0A4X1U569_PIG Computationally mapped isoform of RAB18, member RAS onco family OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "locus": { "chromosome": "10", "start_pos": 39000678, "end_pos": 38970609, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090340.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090340.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073849.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073849.1" } ] } }, { "isoform_ac": "A0A4X1U5R3-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#A0A4X1U5R3-1", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELADTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 182, "header": "tr|A0A4X1U5R3-1|A0A4X1U5R3_PIG Computationally mapped isoform of Ras-related protein Rab-18 OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "locus": { "chromosome": "10", "start_pos": 39000678, "end_pos": 38970609, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075836.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075836.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061938.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061938.1" } ] } }, { "isoform_ac": "A0A5G2QJ69-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#A0A5G2QJ69-1", "sequence": { "sequence": "ISFSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 187, "header": "tr|A0A5G2QJ69-1|I3LC07_PIG Computationally mapped isoform of Ras-related protein Rab-18 OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "locus": { "chromosome": "10", "start_pos": 39000678, "end_pos": 38975709, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087725.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087725.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062070.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062070.1" } ] } }, { "isoform_ac": "A0A5G2QUG2-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#A0A5G2QUG2-1", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 142, "header": "tr|A0A5G2QUG2-1|I3LC07_PIG Computationally mapped isoform of Ras-related protein Rab-18 OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "locus": { "chromosome": "10", "start_pos": 39000678, "end_pos": 38970609, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080587.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080587.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061801.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061801.1" } ] } }, { "isoform_ac": "A0A5G2QW88-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#A0A5G2QW88-1", "sequence": { "sequence": "AVLFHLWRFLEDWAQTFLCVNCFCSCARVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 192, "header": "tr|A0A5G2QW88-1|I3LC07_PIG Computationally mapped isoform of Ras-related protein Rab-18 OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "locus": { "chromosome": "10", "start_pos": 39000678, "end_pos": 38990921, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071086.1", "url": "https://www.ensembl.org/id/ENSSSCT00000071086.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069126.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069126.1" } ] } }, { "isoform_ac": "A0A5G2QWD0-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#A0A5G2QWD0-1", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 187, "header": "tr|A0A5G2QWD0-1|I3LC07_PIG Computationally mapped isoform of Ras-related protein Rab-18 OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "locus": { "chromosome": "10", "start_pos": 39000678, "end_pos": 38970609, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073121.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073121.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068460.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068460.1" } ] } }, { "isoform_ac": "I3LC07-1", "url": "https://www.uniprot.org/uniprotkb/I3LC07/entry#I3LC07-1", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 206, "header": "tr|I3LC07-1|I3LC07_PIG Isoform 1 of Ras-related protein Rab-18 OS=Sus scrofa OX=9823 GN=RAB18 PE=1 SV=1 CANONICAL=I3LC07-1" }, "locus": { "chromosome": "10", "start_pos": 39000678, "end_pos": 38970609, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024844.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024844.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021580.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021580.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ69", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ69" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620478", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620478", "resource": "KEGG Pathway" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" }, { "id": "R-SSC-6811436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811436", "resource": "Reactome", "description": "COPI-independent Golgi-to-ER retrograde traffic" }, { "id": "R-SSC-8876198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "resource": "Reactome", "description": "RAB GEFs exchange GTP for GDP on RABs" } ], "orthologs": [ { "uniprot_canonical_ac": "G3H3P1-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "Rab18", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLSHREESHGGGACGGYCSVL", "length": 206 }, "evidence": [ { "id": "I3LC07", "url": "https://omabrowser.org/oma/group/I3LC07/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O23657-1", "protein_name": "Ras-related protein RABC1", "gene_name": "RABC1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYCCSS", "length": 212 }, "evidence": [ { "id": "I3LC07", "url": "https://omabrowser.org/oma/group/I3LC07/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P35293-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "Rab18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLSHREESRGGGACGGYCSVL", "length": 206 }, "evidence": [ { "id": "I3LC07", "url": "https://omabrowser.org/oma/group/I3LC07/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q0IIG8-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLTHREEGQGGGACGGYCSVL", "length": 206 }, "evidence": [ { "id": "I3LC07", "url": "https://omabrowser.org/oma/group/I3LC07/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54GY8-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "rab18", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNTSSSQPKQRNTGSVKVEDEPDHNQGVCSC", "length": 202 }, "evidence": [ { "id": "I3LC07", "url": "https://omabrowser.org/oma/group/I3LC07/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5ZLG1-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVKLSNKEEGHGGGACGGYCSML", "length": 206 }, "evidence": [ { "id": "I3LC07", "url": "https://omabrowser.org/oma/group/I3LC07/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLSHREEGQGGGACGGYCSVL", "length": 206 }, "evidence": [ { "id": "I3LC07", "url": "https://omabrowser.org/oma/group/I3LC07/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" }, { "name": "G protein activity", "id": "GO:0003925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003925", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" }, { "name": "lipid droplet organization", "id": "GO:0034389", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034389", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "I3LC07", "url": "https://www.uniprot.org/uniprotkb/I3LC07" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19669", "name": "", "equation": "GTP + H2O = GDP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19669", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19669" } ] }, { "id": "R-SSC-6798743", "name": "Exocytosis of secretory granule membrane proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane, secretory granule membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6798743", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798743" } ] }, { "id": "R-SSC-8850040", "name": "RAB3GAP1:RAB3GAP2 recruits RAB18:GCDP to ER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8850040", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8850040" } ] }, { "id": "R-SSC-8850041", "name": "RAB3GAP1:RAB3GAP2 promotes nucleotide exchange on RAB18", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8850041", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8850041" } ] }, { "id": "R-SSC-8877998", "name": "RAB3GAP1:RAB3GAP2 exchanges GTP for GDP on RAB18", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8877998", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8877998" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC07-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 206, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC07-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC07" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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Activates serine/threonine-protein kinase TBK1 and facilitates its oligomerization. Enhances the phosphorylation of NF-kappa-B p65 subunit RELA by TBK1. Promotes TBK1-induced as well as TNF or PMA-induced activation of NF-kappa-B. Participates in IFNB promoter activation via TICAM1.", "evidence": [ { "database": "UniProtKB", "id": "A0ABB5UQ68", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQ68#function" }, { "database": "UniProtKB", "id": "ARBA00094475", "url": "https://www.uniprot.org/uniprotkb/ARBA00094475#function" }, { "database": "UniProtKB", "id": "I3LKX7", "url": "https://www.uniprot.org/uniprotkb/I3LKX7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LKX7", "url": "https://www.uniprot.org/uniprotkb/I3LKX7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AZI2", "url": "https://www.uniprot.org/uniprotkb/I3LKX7", "locus": { "chromosome": "13", "start_pos": 14757279, "end_pos": 14785419, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028258", "url": "https://www.ensembl.org/id/ENSSSCG00000028258" } ] } } ], "crossref": [ { "id": "ENSSSCG00000028258", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028258", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524397", "url": "https://www.ncbi.nlm.nih.gov/gene/100524397", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR024581", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024581", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051891", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051891", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524397", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524397", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PWPSQSC", "url": "https://omabrowser.org/oma/group/PWPSQSC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LKX7", "url": "https://www.orthodb.org/?gene=I3LKX7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14432", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14432", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14432:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14432:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12845", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12845", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003358397", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358397", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1UF74", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UF74", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UF74-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UF74-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPY0", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPY0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UPY0-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UPY0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQ68", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQ68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UQ68-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UQ68-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKX7", "url": "https://www.uniprot.org/uniprotkb/I3LKX7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKX7-1", "url": "https://www.uniprot.org/uniprotkb/I3LKX7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEALIDDDICILDHEKAHRRDTVTPVSIYSDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRFLEEKLLGARKDEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKINKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVIRNLNPPSSNWEVEKLSCDLKIHGLEQELELMKKECRDLKIELQKAKQTDPPQEDSLKSRDLQRLSTSSDNMQNAYWELKREMSNLHLVTQVQAELLRKLKTPTAIKKAGTPAGYTEDLGKESTKLHLTNLTAAYRRQPTLSPNSRALCQATPSPLPGDTKVLSERAILQSWTDNEQTILHDNTDFQEHNSYGRNSLEDNSWVFPSPPKSSETPFGEAKNKTLPLPNLPPLHYLDQRNQNCQYKS", "length": 392, "header": "tr|I3LKX7-1|I3LKX7_PIG Isoform 1 of 5-azacytidine-induced protein 2 OS=Sus scrofa OX=9823 GN=AZI2 PE=1 SV=1 CANONICAL=I3LKX7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UF74-1", "url": "https://www.uniprot.org/uniprotkb/I3LKX7/entry#A0A4X1UF74-1", "sequence": { "sequence": "MEALIDDDICILDHEKAHRRDTVTPVSIYSDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRFLEEKLLGARKDEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKI", "length": 113, "header": "tr|A0A4X1UF74-1|A0A4X1UF74_PIG Computationally mapped isoform of 5-azacytidine induced 2 OS=Sus scrofa OX=9823 GN=AZI2 PE=4 SV=2 CANONICAL=I3LKX7-1" }, "locus": { "chromosome": "13", "start_pos": 14777025, "end_pos": 14774963, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053342.4", "url": "https://www.ensembl.org/id/ENSSSCT00000053342.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050781.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050781.2" } ] } }, { "isoform_ac": "A0ABB5UPY0-1", "url": "https://www.uniprot.org/uniprotkb/I3LKX7/entry#A0ABB5UPY0-1", "sequence": { "sequence": "MEALIDDDICILDHEKAHRRDTVTPVSIYSDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRFLEEKLLGARKDEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKINKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVIRNLNPPSSNWEVEKLSCDLKIHGLEQELELMKKECRDLKIELQKAKQTDPPQEDSLKSRDLQRLSTSSWHPSRIHRRPREREHKTALDKSHRSVQKTAYPLTKQQSPLSGHTFPFTRRHKGFIRESHSPVMDR", "length": 281, "header": "tr|A0ABB5UPY0-1|A0ABB5UPY0_PIG Computationally mapped isoform of 5-azacytidine induced 2 OS=Sus scrofa OX=9823 GN=AZI2 PE=4 SV=1 CANONICAL=I3LKX7-1" }, "locus": { "chromosome": "13", "start_pos": 14777025, "end_pos": 14759208, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107064.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107064.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081466.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081466.1" } ] } }, { "isoform_ac": "A0ABB5UQ68-1", "url": "https://www.uniprot.org/uniprotkb/I3LKX7/entry#A0ABB5UQ68-1", "sequence": { "sequence": "MKKECRDLKIELQKAKQTDPPQEDSLKSRDLQRLSTSSDNMQNAYWELKREMSNLHLVTQVQAELLRKLKTPTAIKKAGTPAGYTEDLGKESTKLHLTNLTAAYRRQPTLSPNSRALCQATPSPLPGDTKVLSERAILQSWTDNEQTILHDNTDFQEHNSYGRNSLEDNSWVFPSPPKSSETPFGEAKNKTLPLPNLPPLHYLDQRNQNCQYKS", "length": 214, "header": "tr|A0ABB5UQ68-1|A0ABB5UQ68_PIG Computationally mapped isoform of 5-azacytidine-induced protein 2 OS=Sus scrofa OX=9823 GN=AZI2 PE=1 SV=1 CANONICAL=I3LKX7-1" }, "locus": { "chromosome": "13", "start_pos": 14772737, "end_pos": 14758994, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107062.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107062.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081464.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081464.1" } ] } }, { "isoform_ac": "I3LKX7-1", "url": "https://www.uniprot.org/uniprotkb/I3LKX7/entry#I3LKX7-1", "sequence": { "sequence": "MEALIDDDICILDHEKAHRRDTVTPVSIYSDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRFLEEKLLGARKDEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKINKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVIRNLNPPSSNWEVEKLSCDLKIHGLEQELELMKKECRDLKIELQKAKQTDPPQEDSLKSRDLQRLSTSSDNMQNAYWELKREMSNLHLVTQVQAELLRKLKTPTAIKKAGTPAGYTEDLGKESTKLHLTNLTAAYRRQPTLSPNSRALCQATPSPLPGDTKVLSERAILQSWTDNEQTILHDNTDFQEHNSYGRNSLEDNSWVFPSPPKSSETPFGEAKNKTLPLPNLPPLHYLDQRNQNCQYKS", "length": 392, "header": "tr|I3LKX7-1|I3LKX7_PIG Isoform 1 of 5-azacytidine-induced protein 2 OS=Sus scrofa OX=9823 GN=AZI2 PE=1 SV=1 CANONICAL=I3LKX7-1" }, "locus": { "chromosome": "13", "start_pos": 14777025, "end_pos": 14758994, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107063.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107063.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081465.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081465.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LKX7", "url": "https://www.uniprot.org/uniprotkb/I3LKX7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524397", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524397", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MAC7-1", "protein_name": "5-azacytidine-induced protein 2", "gene_name": "Azi2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDTLVEDDICILNHEKAQRREAVMPLSVYSGDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRALEEKLVGARVDEETSSVGREQVNKAYHAYREVCIDRDNLKNKLEKINKDNTESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSLDLKIHGLEQELEVMRKECHDLKIELQKAKQTGPPQENIPQDRDLIRRSLSREEDGPHQGLLHSDNMQHAYWELKREMSNLHLVTQVQAELLRKLKTSAAIKKACTPAGCVEDLGKDLAKLHLTNFTATYKRYPPLSPNGKATCYAPPSTLPGDTKVLSDKAVLQSWTDNERLIPNDGTDFQEHNSYGRNSLDDNSWVFPSPPKSSETTFGENKNKTFPLSNLPPLHYLDQHNQNCLYKS", "length": 405 }, "evidence": [ { "id": "I3LKX7", "url": "https://omabrowser.org/oma/group/I3LKX7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0XAW0-1", "protein_name": "5-azacytidine-induced protein 2", "gene_name": "AZI2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEELVEDDICILNHEKADNSHKRDGDIPVSAYSGDESVASHFALVTAYEDIKKRLKETEKENSFLKKRVRILEEKLLGSRLEEECSSVGREQVNKAYQAYREVCIDRDNLKSKLDKMTKETAESLKNLNEQLQSKEVELLQLKTEVETQQVMKSLNCCTQTSWEIEKLNSDLKVHSLEQDLENLKQECNSLRKELQKYKQKDQDQDENPLNGDILQRQAVQSVQQAYWELKREMSNLQLVTEVQTEVLRKLKTNITATKKAASSAPVQCVELKNITRQNLMSGVVYKKLSQSDKVHCNAAPPPLPGHVKIPSERVILQAWTDEGPIPVDGETFQEHHSYGKSSLEDNSWVFPSPPKPNENVFWETNKVLSNCPADYLDQCNQNCLHKN", "length": 388 }, "evidence": [ { "id": "I3LKX7", "url": "https://omabrowser.org/oma/group/I3LKX7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q3SYW5-1", "protein_name": "5-azacytidine-induced protein 2", "gene_name": "AZI2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDALVEDDICILNHEKAHRRDPVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRILEEKLIGARKDEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVIRNLNPPSSNWEVEKLSCDLKIHGLEQELELLRKECRDLRIELQKAKQTDPSLDDNLNCRDLQRLSVSSDNMQSAYWELKREMSNLHLVTQVQAELLRKLKTPAAIKKACAPAGCMEDLGKDSTKLHLSNFTAAYKRHAPLSPNGKTLCHATPSPLPGDAKVLSEKAALQSWTDHERSIPHDGTNFQEHNSYSRNSLEDNSWVFPSPPKSSETTFGEMKSKPLPLPNLPPLHYLDQHNQNCHYKH", "length": 393 }, "evidence": [ { "id": "I3LKX7", "url": "https://omabrowser.org/oma/group/I3LKX7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q4KMA0-1", "protein_name": "5-azacytidine-induced protein 2", "gene_name": "Azi2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTLVEDDICILNHEKAHKREAVTPLSAYPGDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRALEEKLVGARVEEETSSVGREQVNKAYHAYREVCIDRDNLKSRLEKISKDNSESLRALTEQLQCKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELLRKECSDLRTELQKARQTGPSQEDILQDRDVIRPSLPREEHVPHQGPHHSDHMQHAYWELRREMANLHLVTRVQAELLRQLKTAAAGKACTQVGCVEDLGRDSAKLHLANCTAAYKRHPPLSPHGKATCYAPPSTLPGDRKAFSDKAVLQSWTDNERLTPNDGADFQEHNSYGRNSLEDNSWVFPSPPKSSETAFGESKSKILPSPNLPPLHYLDQHNQNCLYKS", "length": 404 }, "evidence": [ { "id": "I3LKX7", "url": "https://omabrowser.org/oma/group/I3LKX7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9H6S1-1", "protein_name": "5-azacytidine-induced protein 2", "gene_name": "AZI2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQAELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTSSPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKSSETAFGETKTKTLPLPNLPPLHYLDQHNQNCLYKN", "length": 392 }, "evidence": [ { "id": "I3LKX7", "url": "https://omabrowser.org/oma/group/I3LKX7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QYP6-1", "protein_name": "5-azacytidine-induced protein 2", "gene_name": "Azi2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVEDDICILNHEKAHRREAVTPLSAYPGDESVASHFALVTAYEDIKKRLKDSEKENSFLKKRIRALEERLVGARADEETSSVGREQVNKAYHAYREVCIDRDNLKNQLEKINKDNSESLKMLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSSWEVEKLSCDLKIHGLEQELGLLRKECSDLRTELQKARQTGPPQEDILQGRDVIRPSLSREEHVPHQGLHHSDNMQHAYWELKREMSNLHLVTQVQAELLRKLKTSAAVKKACTPVGCVEDLGRDSTKLHLTNFTATYKRHPSLSPNGKAPCYAPSSPLPGDRKVFSDKAVLQSWTDNERLVPNDGADFPEHSSYGRNSLEDNSWVFPSPPKSSETAFGENKSKILPLSNLPPLHYLDQQNQNCLYKS", "length": 405 }, "evidence": [ { "id": "I3LKX7", "url": "https://omabrowser.org/oma/group/I3LKX7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LKX7", "url": "https://www.uniprot.org/uniprotkb/I3LKX7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of canonical NF-kappaB signal transduction", "id": "GO:0043124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043124", "evidence": [ { "database": "UniProtKB", "id": "I3LKX7", "url": "https://www.uniprot.org/uniprotkb/I3LKX7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 277, "end_pos": 279, "annotation": "n_glycosylation_sequon" }, { "start_pos": 367, "end_pos": 369, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LKX7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKX7" }, { "id": "PF12845", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12845" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tbk1/Ikki binding", "eco_id": "ECO_0000259", "start_pos": 214, "end_pos": 264, "start_aa": "Thr", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 277, "end_pos": 279 }, { "start_pos": 367, "end_pos": 369 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"PAX3", "type": "recommended", "evidence": [ { "id": "I3LAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ] }, { "name": "PAX3", "type": "synonym", "evidence": [ { "id": "XP_020931016", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931016" } ] } ], "protein_names": [ { "name": "Paired box 3", "type": "synonym", "evidence": [ { "id": "I3LAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAG7/entry#names_and_taxonomy" } ] }, { "name": "paired box protein Pax-3 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020931016", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931016" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PAX3", "url": "https://www.uniprot.org/uniprotkb/I3LAG7", "locus": { "chromosome": "15", "start_pos": 124094295, "end_pos": 124193011, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028418", "url": "https://www.ensembl.org/id/ENSSSCG00000028418" } ] } } ], "crossref": [ { "id": "ENSSSCG00000028418", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028418", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00086", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00131", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00131", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "414901", "url": "https://www.ncbi.nlm.nih.gov/gene/414901", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001523", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001523", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017970", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017970", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043182", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043182", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043565", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043565", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:414901", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:414901", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PDIACFQ", "url": "https://omabrowser.org/oma/group/PDIACFQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45636", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45636", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45636:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45636:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00292", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00292", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12360", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12360", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3214847", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3214847", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020931016", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931016", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1V5S3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5S3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V5S3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5S3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAG7-1", "url": "https://www.uniprot.org/uniprotkb/I3LAG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKTKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQPTAIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLEHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA", "length": 484, "header": "tr|I3LAG7-1|I3LAG7_PIG Isoform 1 of Paired box 3 OS=Sus scrofa OX=9823 GN=PAX3 PE=3 SV=2 CANONICAL=I3LAG7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V5S3-1", "url": "https://www.uniprot.org/uniprotkb/I3LAG7/entry#A0A4X1V5S3-1", "sequence": { "sequence": "MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKTKHSIDGILSERGKRRRAGRRPRPAPRQTSAL", "length": 215, "header": "tr|A0A4X1V5S3-1|I3LAG7_PIG Computationally mapped isoform of Paired box 3 OS=Sus scrofa OX=9823 GN=PAX3 PE=3 SV=1 CANONICAL=I3LAG7-1" }, "locus": { "chromosome": "15", "start_pos": 124192625, "end_pos": 124188227, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072301.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072301.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066299.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066299.1" } ] } }, { "isoform_ac": "I3LAG7-1", "url": "https://www.uniprot.org/uniprotkb/I3LAG7/entry#I3LAG7-1", "sequence": { "sequence": "MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKTKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQPTAIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLEHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA", "length": 484, "header": "tr|I3LAG7-1|I3LAG7_PIG Isoform 1 of Paired box 3 OS=Sus scrofa OX=9823 GN=PAX3 PE=3 SV=2 CANONICAL=I3LAG7-1" }, "locus": { "chromosome": "15", "start_pos": 124192625, "end_pos": 124095299, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032547.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032547.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021035.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021035.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V5S3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V5S3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:414901", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:414901", "resource": "KEGG Pathway" }, { "id": "R-SSC-3214847", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3214847", "resource": "Reactome", "description": "HATs acetylate histones" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6ATQ4-1", "protein_name": "Paired box 3", "gene_name": "Pax3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNADSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLEHMKNVDSLPTSQPYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF", "length": 479 }, "evidence": [ { "id": "I3LAG7", "url": "https://omabrowser.org/oma/group/I3LAG7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MTX0-1", "protein_name": "Paired box 3", "gene_name": "PAX3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQPTAIPQAVSDPSSTVHRPQPLPPSTVHQSTLPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA", "length": 484 }, "evidence": [ { "id": "I3LAG7", "url": "https://omabrowser.org/oma/group/I3LAG7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF", "length": 479 }, "evidence": [ { "id": "I3LAG7", "url": "https://omabrowser.org/oma/group/I3LAG7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "muscle organ development", "id": "GO:0007517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007517", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" }, { "name": "anatomical structure morphogenesis", "id": "GO:0009653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009653", "evidence": [ { "database": "UniProtKB", "id": "I3LAG7", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Homeobox", "eco_id": "ECO_0000259", "start_pos": 217, "end_pos": 277, "start_aa": "Arg", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAG7" }, { "id": "PS51057", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51057" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Paired", "eco_id": "ECO_0000259", "start_pos": 34, "end_pos": 161, "start_aa": "Gly", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": 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"categories": [ "Protein Classification" ] }, { "id": "TRPGNIF", "url": "https://omabrowser.org/oma/group/TRPGNIF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10924", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10924", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10924:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10924:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07690", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07690", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "32747", "url": "https://www.rhea-db.org/rhea/32747", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "32751", "url": "https://www.rhea-db.org/rhea/32751", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "75443", "url": "https://www.rhea-db.org/rhea/75443", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QCA9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCA9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCA9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCA9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RJ85", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RJ85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RJ85-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RJ85-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIC4-1", "url": "https://www.uniprot.org/uniprotkb/I3LIC4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVNEDPSHEGLDGAPSQTSALQENPNLAAQPSVSGHPSISAHPSFSAHASTSAHPSVSIHPSVSVYPSSSAHPSTLAQPSGLVQPSSSGQPSSSGPEDLSVIKVSKRRWAVVLLFSCYSMCNAFQWIQYGSINNIFMNFYGVSAFAIDWLSMCYMLTYPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVLGQVICSVAQVFILGMPSRIASVWFGANEVSTACSIAVFGNQLGIAIGFLVPPVLVPNIKDKAELAYHISIMFYIIAGVATLLFILVVIVFKEKPKHAPSRAQSLSYTLASPDASYLNSIIRLFKNLNFVLLIISYGLNAGAFYSLSTLLNRMVILHYPGEEVNAGRIGLTIIIAGMFGAVISGIWLDRTKTYKETTLVVYVMTLVGMVVYTFTLNLGYLWVVFITAGAMGFFMTGYLPLGFEFAVELTYPESEGMSSGLLNVSAQIFGIIFTISQGQIIDTYGTMPGNIFLCVFLTLGVALTAFIRADLRRQKANKETPENKLQEEEESKTSKAPTPVSEEHL", "length": 548, "header": "tr|I3LIC4-1|I3LIC4_PIG Isoform 1 of Choline/ethanolamine transporter FLVCR2 OS=Sus scrofa OX=9823 GN=FLVCR2 PE=3 SV=2 CANONICAL=I3LIC4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QCA9-1", "url": "https://www.uniprot.org/uniprotkb/I3LIC4/entry#A0A5G2QCA9-1", "sequence": { "sequence": "MPSRIASVWFGANEVSTACSIAVFGNQLGIAIGFLVPPVLVPNIKDKAELAYHISIMFYIIAGVATLLFILVVIVFKEKPKHAPSRAQSLSYTLASPDASYLNSIIRLFKNLNFVLLIISYEAPGGRGEQDQQSPHPCVRGASLRERWW", "length": 149, "header": "tr|A0A5G2QCA9-1|I3LIC4_PIG Computationally mapped isoform of Choline/ethanolamine transporter FLVCR2 OS=Sus scrofa OX=9823 GN=FLVCR2 PE=3 SV=2 CANONICAL=I3LIC4-1" }, "locus": { "chromosome": "7", "start_pos": 98807875, "end_pos": 98719115, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090732.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090732.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061174.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061174.2" } ] } }, { "isoform_ac": "A0A5G2RJ85-1", "url": "https://www.uniprot.org/uniprotkb/I3LIC4/entry#A0A5G2RJ85-1", "sequence": { "sequence": "MPSRIASVWFGANEVSTACSIAVFGNQLGIAIGFLVPPVLVPNIKDKAELAYHISIMFYIIAGVATLLFILVVIVFKEKPKHAPSRAQSLSYTLASPDASYLNSIIRLFKNLNFVLLIISYGLNAGAFYSLSTLLNRMVILHYPGEEVNAGRIGLTIIIAGMFGAVISGIWLDRTKTYKNLCHPNCLIW", "length": 189, "header": "tr|A0A5G2RJ85-1|I3LIC4_PIG Computationally mapped isoform of Choline/ethanolamine transporter FLVCR2 OS=Sus scrofa OX=9823 GN=FLVCR2 PE=3 SV=2 CANONICAL=I3LIC4-1" }, "locus": { "chromosome": "7", "start_pos": 98823836, "end_pos": 98719115, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081863.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081863.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071854.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071854.2" } ] } }, { "isoform_ac": "I3LIC4-1", "url": "https://www.uniprot.org/uniprotkb/I3LIC4/entry#I3LIC4-1", "sequence": { "sequence": "MVNEDPSHEGLDGAPSQTSALQENPNLAAQPSVSGHPSISAHPSFSAHASTSAHPSVSIHPSVSVYPSSSAHPSTLAQPSGLVQPSSSGQPSSSGPEDLSVIKVSKRRWAVVLLFSCYSMCNAFQWIQYGSINNIFMNFYGVSAFAIDWLSMCYMLTYPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVLGQVICSVAQVFILGMPSRIASVWFGANEVSTACSIAVFGNQLGIAIGFLVPPVLVPNIKDKAELAYHISIMFYIIAGVATLLFILVVIVFKEKPKHAPSRAQSLSYTLASPDASYLNSIIRLFKNLNFVLLIISYGLNAGAFYSLSTLLNRMVILHYPGEEVNAGRIGLTIIIAGMFGAVISGIWLDRTKTYKETTLVVYVMTLVGMVVYTFTLNLGYLWVVFITAGAMGFFMTGYLPLGFEFAVELTYPESEGMSSGLLNVSAQIFGIIFTISQGQIIDTYGTMPGNIFLCVFLTLGVALTAFIRADLRRQKANKETPENKLQEEEESKTSKAPTPVSEEHL", "length": 548, "header": "tr|I3LIC4-1|I3LIC4_PIG Isoform 1 of Choline/ethanolamine transporter FLVCR2 OS=Sus scrofa OX=9823 GN=FLVCR2 PE=3 SV=2 CANONICAL=I3LIC4-1" }, "locus": { "chromosome": "7", "start_pos": 98807856, "end_pos": 98718456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030716.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030716.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021165.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021165.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCA9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCA9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "P60815-1", "protein_name": "Choline/ethanolamine transporter FLVCR2", "gene_name": "Flvcr2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNESLNQEESNDRPVPESEFQADTSYSTQPSVSIHPSVSGHPSVSIHPSVSGHPSVSIDPSVSVHPSSSAHPSTLAQPSGLTHPNELVKEDSVIKVSKRRWAVVLVFSCYSLCNAFQWIQYGSINNIFMNFYGVSAFAIDWLSMCYMLTYIPLLLPVAWMLEKFGLRTIAITGSALNCLGAWVKLGSLEPHLFPVTMVGQVICSVAQVFILGMPSRIASVWFGANEVSTACSMAVFGNQLGIAIGFLVPPVLVPNIKDQEKLAYHISIMFYIIGGVATLLFILVIIVFKEKPKYPPSRAQSLSYALATTDASYLSSIVRLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIMHFPGQEVNAGRIGLTIVIAGMFGAMISGIWLDKSKTYKETTLVVYIMTLVGMVVYTFTLNLNHLWIVFITADSLGFFMTGYLPLGFEFAVELTYPESEGVSSGLLNVSAQVFGIIFTISQGQIIDNYGSVPGNIFLCVFLALGSALTAFIKSDLRRQRANKDAPETKVQEEEEEEEESNTSKVPTVLSEAHL", "length": 546 }, "evidence": [ { "id": "I3LIC4", "url": "https://omabrowser.org/oma/group/I3LIC4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9UPI3-1", "protein_name": "Choline/ethanolamine transporter FLVCR2", "gene_name": "FLVCR2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNEGPNQEESDDTPVPESALQADPSVSVHPSVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPEDLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFLTLGAALTAFIKADLRRQKANKETLENKLQEEEEESNTSKVPTAVSEDHL", "length": 526 }, "evidence": [ { "id": "I3LIC4", "url": "https://omabrowser.org/oma/group/I3LIC4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" }, { "name": "mitochondrial membrane", "id": "GO:0031966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031966", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" }, { "name": "heme transmembrane transporter activity", "id": "GO:0015232", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015232", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" }, { "name": "heme binding", "id": "GO:0020037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0020037", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" }, { "name": "choline transmembrane transporter activity", "id": "GO:0015220", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015220", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" }, { "name": "ethanolamine transmembrane transporter activity", "id": "GO:0034228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034228", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "heme export", "id": "GO:0097037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097037", "evidence": [ { "database": "UniProtKB", "id": "I3LIC4", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 466, "end_pos": 468, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "32747", "name": "", "equation": "ethanolamine(in) = ethanolamine(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "32747", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/32747" } ] }, { "id": "32751", "name": "", "equation": "choline(out) = choline(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "32751", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/32751" } ] }, { "id": "75443", "name": "", "equation": "heme b(in) = heme b(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "75443", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/75443" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LIC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIC4" }, { "id": "PS50850", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50850" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Major facilitator superfamily (MFS) profile", "eco_id": "ECO_0000259", "start_pos": 111, "end_pos": 515, "start_aa": "Val", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 466, "end_pos": 468 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LIQ5-1", "uniprot_ac": "I3LIQ5", "uniprot_id": "I3LIQ5_PIG", "mass": { "chemical_mass": 51422.0, "monoisotopic_mass": 51422.0 }, "refseq": { "ac": "XP_003358698", "name": "major facilitator superfamily domain-containing protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358698" }, "gene_names": [ { "name": "MFSD1", "type": "recommended", "evidence": [ { "id": "I3LIQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ] }, { "name": "MFSD1", "type": "synonym", "evidence": [ { "id": "XP_003358698", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358698" } ] } ], "protein_names": [ { "name": "Lysosomal dipeptide transporter MFSD1", "type": "recommended", "evidence": [ { "id": "I3LIQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5/entry#names_and_taxonomy" } ] }, { "name": "Major facilitator superfamily domain-containing protein 1", "type": "synonym", "evidence": [ { "id": "I3LIQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5/entry#names_and_taxonomy" } ] }, { "name": "major facilitator superfamily domain-containing protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003358698", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358698" } ] } ], "function": [ { "annotation": "Lysosomal dipeptide uniporter that selectively exports lysine, arginine or histidine-containing dipeptides with a net positive charge from the lysosome lumen into the cytosol. Could play a role in a specific type of protein O-glycosylation indirectly regulating macrophages migration and tissue invasion. Also essential for liver homeostasis.", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5#function" }, { "database": "UniProtKB", "id": "ARBA00045709", "url": "https://www.uniprot.org/uniprotkb/ARBA00045709#function" }, { "database": "UniProtKB", "id": "A0A5G2QG03", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG03#function" }, { "database": "UniProtKB", "id": "A0A5G2QIM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIM7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MFSD1", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5", "locus": { "chromosome": "13", "start_pos": 98615523, "end_pos": 98592370, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026018", "url": "https://www.ensembl.org/id/ENSSSCG00000026018" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026018", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026018", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17340", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17340", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621077", "url": "https://www.ncbi.nlm.nih.gov/gene/100621077", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011701", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011701", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621077", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621077", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CVLYYSA", "url": "https://omabrowser.org/oma/group/CVLYYSA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LIQ5", "url": "https://www.orthodb.org/?gene=I3LIQ5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23512", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23512", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23512:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23512:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07690", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07690", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003358698", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358698", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "79367", "url": "https://www.rhea-db.org/rhea/79367", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79371", "url": "https://www.rhea-db.org/rhea/79371", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79375", "url": "https://www.rhea-db.org/rhea/79375", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79379", "url": "https://www.rhea-db.org/rhea/79379", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79383", "url": "https://www.rhea-db.org/rhea/79383", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79387", "url": "https://www.rhea-db.org/rhea/79387", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79391", "url": "https://www.rhea-db.org/rhea/79391", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79395", "url": "https://www.rhea-db.org/rhea/79395", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79399", "url": "https://www.rhea-db.org/rhea/79399", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79403", "url": "https://www.rhea-db.org/rhea/79403", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79407", "url": "https://www.rhea-db.org/rhea/79407", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79411", "url": "https://www.rhea-db.org/rhea/79411", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "79415", "url": "https://www.rhea-db.org/rhea/79415", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QG03", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG03", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG03-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG03-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIM7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIQ5-1", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEEDEEARALLPSSPVKAGRGASNTPDAPRALSALCDPSHLAHRLLVLLLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVILCFFGGFLTDRVFGIRWGTIIFSCFVCIGQVIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKVEASLGSAGHTTLGVTLLIGGITCILSLVCALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSIVYVISAPMSPIFGLLVDKTGKNIIWVLCAVVTTLASHMLLAFTLWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVISIIAGMILDTRGYLFLEVFFIACVSLSLLSVVLLYLVNRAQGGTLNYSATQREEIKLSHAE", "length": 468, "header": "tr|I3LIQ5-1|I3LIQ5_PIG Isoform 1 of Lysosomal dipeptide transporter MFSD1 OS=Sus scrofa OX=9823 GN=MFSD1 PE=3 SV=2 CANONICAL=I3LIQ5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QG03-1", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5/entry#A0A5G2QG03-1", "sequence": { "sequence": "MEEEDEEARALLPSSPVKAGRGASNTPDAPRALSALCDPSHLAHRLLVLLLMCFLGFAIFAMIILLPFRLRLNGWGTIIFSCFVCIGQVIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKVEASLGSAGHTTLGVTLLIGGITCILSLVCALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSIVYVISAPMSPIFGLLVDKTGKNIIWVLCAVVTTLASHMLLAFTLWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVISIIAGMILDTRGYLFLEVFFIACVSLSLLSVVLLYLVNRAQGGTLNYSATQREEIKLSHAE", "length": 429, "header": "tr|A0A5G2QG03-1|I3LIQ5_PIG Computationally mapped isoform of Lysosomal dipeptide transporter MFSD1 OS=Sus scrofa OX=9823 GN=MFSD1 PE=3 SV=1 CANONICAL=I3LIQ5-1" }, "locus": { "chromosome": "13", "start_pos": 98614344, "end_pos": 98592455, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074826.1", "url": "https://www.ensembl.org/id/ENSSSCT00000074826.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063173.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063173.1" } ] } }, { "isoform_ac": "A0A5G2QIM7-1", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5/entry#A0A5G2QIM7-1", "sequence": { "sequence": "MEEEDEEARALLPSSPVKAGRGASNTPDAPRALSALCDPSHLAHRLLVLLLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVILCFFGGFLTDRVFGIRWGTIIFSCFVCIGQVIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKVEASLGSAGHTTLGVTLLIGGITCILSLVCALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSIVYVISAPMSPIFGLLVDKTGKNIIWVLCAVVTTLASHMLLAFTLWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVISIIAGMILDTRGYLFLEVFFIACVSCGTLNYSATQREEIKLSHAE", "length": 452, "header": "tr|A0A5G2QIM7-1|I3LIQ5_PIG Computationally mapped isoform of Lysosomal dipeptide transporter MFSD1 OS=Sus scrofa OX=9823 GN=MFSD1 PE=3 SV=1 CANONICAL=I3LIQ5-1" }, "locus": { "chromosome": "13", "start_pos": 98614344, "end_pos": 98592455, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077669.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077669.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063761.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063761.1" } ] } }, { "isoform_ac": "I3LIQ5-1", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5/entry#I3LIQ5-1", "sequence": { "sequence": "MEEEDEEARALLPSSPVKAGRGASNTPDAPRALSALCDPSHLAHRLLVLLLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVILCFFGGFLTDRVFGIRWGTIIFSCFVCIGQVIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKVEASLGSAGHTTLGVTLLIGGITCILSLVCALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSIVYVISAPMSPIFGLLVDKTGKNIIWVLCAVVTTLASHMLLAFTLWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVISIIAGMILDTRGYLFLEVFFIACVSLSLLSVVLLYLVNRAQGGTLNYSATQREEIKLSHAE", "length": 468, "header": "tr|I3LIQ5-1|I3LIQ5_PIG Isoform 1 of Lysosomal dipeptide transporter MFSD1 OS=Sus scrofa OX=9823 GN=MFSD1 PE=3 SV=2 CANONICAL=I3LIQ5-1" }, "locus": { "chromosome": "13", "start_pos": 98614344, "end_pos": 98592455, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026649.2", "url": "https://www.ensembl.org/id/ENSSSCT00000026649.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023961.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023961.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG03", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG03" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621077", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621077", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZV75-1", "protein_name": "Lysosomal dipeptide transporter MFSD1", "gene_name": "Mfsd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEEEDGEERALLGGRPEADSALQGAPRALPALCDPSHLAHRLVVLLLMCLLGFGSYFCYDNPGALQTQVKRDMQVNTTKFMLLYAWYSWPNVILCFLGGFLIDRIFGIRWGTVIFSCFVCIGQVIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYGKIEASLGSAGHTTLGVTLMVGGITCILSLICALVLAYLDRRAEKILNKEQGKTGEVIKLTDIKDFSLPLMLVFIICVCYYVAVFPFIGLGKVFFIEKFRFSSQSASAINSIVYIISAPMSPIFGFLVDKTGKNIVWVLCAVATTLVAHMMLAFTFWNPWIAMCLLGFSYSLLACALWPMVAFIVPEHQLGTAYGFMQSIQNLGLAVIAILAGMILDTRGYLLLEVFFIACVSLSLLAVVFLYLVNRARGGNLNYSAKQREQMKPSHSE", "length": 464 }, "evidence": [ { "id": "I3LIQ5", "url": "https://omabrowser.org/oma/group/I3LIQ5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1P182-1", "protein_name": "Lysosomal dipeptide transporter MFSD1", "gene_name": "MFSD1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAEEERALLGPDGGDGGSAAPPRALPAVCDPSRLPHRLLVLALMCFLGFGSCFCYDNPAALQTQVQGDMKVNTARFMALYAWYSWPNVVLCFFGGFLIDRVFGIRLGTVIFSIFVCVGQVIFALGALVNAFWLMEVGRFIFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNIMGWIYSRVQDLLGHTGHATLGLTLLIGGITCLFSLACALILAYLDKRAEKLLCKEQGKTGEVIKLTDVKNFSLSLWLIFVICVCYYAAVFPFIGLGKVFFIEKFQFSSQEASAINSVVYIISAPMSPVFGILVDKVGKNIIWVLCAVITTLASHIMLAFTFWNPWIAMCLLGVAYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVIAIAAGMILDTRGYLFLEVFFSACVSLSLVAVVMLYFVNHLTGGDLNWSAKKREKLQKVAANEAEEQERLRRQNEDDLAKLQPKDDDFSLRNKYLSRLGAQLPDNYSSYLSTMAHRSVLK", "length": 518 }, "evidence": [ { "id": "I3LIQ5", "url": "https://omabrowser.org/oma/group/I3LIQ5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3I516-1", "protein_name": "Lysosomal dipeptide transporter MFSD1", "gene_name": "Mfsd1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEEEDEEARGLLGDRPEGDNAVPGAPRALPALCDPSHLAHRLVVLFLMCLLGFGSYFCYDSPAALQTQVKQDMQVNTTKFMLLYAWYSWPNVVLCFLGGFLIDRIFGIRWGTVIFSCFVCIGQAIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYTKIEASLRSPGHMILGVTLMIGCVTCILSLFCALVLAYLDRRAEKILHKEQGKTGDVIKLTDVKDFSLPLWLVFIICVCYYVAIFPFIGLGKVFFMEKFGFASQSASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVATTLVSHMMLAFTFWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVISILAGMILDTRGYLFLEVFFIACVSLSLLAVVCLYVVNRARGGNLNYSAKQREELKLSHSE", "length": 464 }, "evidence": [ { "id": "I3LIQ5", "url": "https://omabrowser.org/oma/group/I3LIQ5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q1JQC1-1", "protein_name": "Lysosomal dipeptide transporter MFSD1", "gene_name": "MFSD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEDEEEEARALLPGGSDEAGRETRAPPAASGALQALCDPSHLAHRLVVLLLMCFLGFGSYFCYDNPAALQIQVKRDMQVNTTKFMLLYAWYSWPNVVLCFFGGFLIDRVFGIRWGTIIFSCFVCIGQVVFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKVEASLGSAGHTTLGVTLMIGGITCILSLVCALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAIFPFIGLVKVFFTEKFGFSSQAASAINSVVYVISAPMSPIFGLLVDKTGKNIIWVLCAVVTTLASHIMLAFTLWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVISIIAGMILDTRGYLFLEVFFIACVSLSLLSVVLLYMVNHAQGGNLNYSAKKREEMKLSHEE", "length": 468 }, "evidence": [ { "id": "I3LIQ5", "url": "https://omabrowser.org/oma/group/I3LIQ5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9DC37-1", "protein_name": "Lysosomal dipeptide transporter MFSD1", "gene_name": "Mfsd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDEDGEDRALLGGRREADSAVHGAPRALSALCDPSRLAHRLVVLSLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVVLCFLGGFLIDRIFGIRWGTVIFSCFVCIGQVIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYGKIEALLGSAGHMTLGVTLMIGCITCIFSLICALALAYLDRRAEKILHKEQGKTGEVIKLRDIKDFSLPLILVFVICVCYYVAVFPFIGLGKVFFMEKFRFSSQSASAINSIVYIISAPMSPLFGLLVDKTGKNIIWVLYAVAATLVSHMMLAFTFWNPWIAMCLLGFSYSLLACALWPMVAFIVPEHQLGTAYGFMQSIQNLGLAVIAILAGMILDSKGYLLLEVFFIACVSLSLLAVVCLYLVNRAQGGNLNYSAKQRERMKLSHPE", "length": 464 }, "evidence": [ { "id": "I3LIQ5", "url": "https://omabrowser.org/oma/group/I3LIQ5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H3U5-1", "protein_name": "Lysosomal dipeptide transporter MFSD1", "gene_name": "MFSD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEEDEEARALLAGGPDEADRGAPAAPGALPALCDPSRLAHRLLVLLLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWPNVVLCFFGGFLIDRVFGIRWGTIIFSCFVCIGQVVFALGGIFNAFWLMEFGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKIEALLGSAGHTTLGITLMIGGITCILSLICALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAFTMWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAIISIIAGMILDSRGYLFLEVFFIACVSLSLLSVVLLYLVNRAQGGNLNYSARQREEIKFSHTE", "length": 465 }, "evidence": [ { "id": "I3LIQ5", "url": "https://omabrowser.org/oma/group/I3LIQ5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VS47-1", "protein_name": "Lysosomal dipeptide transporter MFSD1", "gene_name": "mrva", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAREDEERIVDNEEVSRPTEEDQVVSRAGRRDNELSLPSGGCCMPSSTSHRFMALVFMCLLGFGSYFCYDAPGALQNYFKKDLNLTSAQFTLIYSIYSWPNVVLCFVGGFLIDRLFGIRLGTIIYMMILLVGQLIFACGGILDAFWMMILGRFIFGIGAESLAVAQNSYAVLWFKGKELNMVFGLQLSVARFGSTVNFWVMQPIYEYVSNFYKGHTALGVVLLLATLTCVMSMTCALILGWMDKRAERILQRNNNPAGQIPKLTDVFSFKPPFWMVSIICVAYYVAIFPFIALGQNFFVDRFGLSPAEANTVDSLVYLIAAVSSPVFGFIIDKLGRNVTWVFTATLTTIGAHALLTFTQLTPYVGMIIMGLSYSMLAASLWPLVALIIPEYQLGTAYGFCQSIQNLGLAVITIVAGIIVDHSGGEHMWLQLFFMGWLTIALISTGVIWAYNNKNRGNLNMTPQQRAQFVSAENYQNFE", "length": 478 }, "evidence": [ { "id": "I3LIQ5", "url": "https://omabrowser.org/oma/group/I3LIQ5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" }, { "name": "dipeptide uniporter activity", "id": "GO:0160178", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160178", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "lysosomal membrane", "id": "GO:0005765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005765", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" }, { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein stabilization", "id": "GO:0050821", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050821", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" }, { "name": "protein localization to lysosome", "id": "GO:0061462", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061462", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" }, { "name": "dipeptide transmembrane transport from lysosomal lumen to cytosol", "id": "GO:0141204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0141204", "evidence": [ { "database": "UniProtKB", "id": "I3LIQ5", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 453, "end_pos": 455, "annotation": "n_glycosylation_sequon" }, { "start_pos": 80, "end_pos": 82, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "79367", "name": "", "equation": "L-alpha-aminoacyl-L-arginine(out) = L-alpha-aminoacyl-L-arginine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79367", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79367" } ] }, { "id": "79371", "name": "", "equation": "L-arginyl-L-alpha-amino acid(out) = L-arginyl-L-alpha-amino acid(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79371", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79371" } ] }, { "id": "79375", "name": "", "equation": "L-alpha-aminoacyl-L-histidine(out) = L-alpha-aminoacyl-L-histidine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79375", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79375" } ] }, { "id": "79379", "name": "", "equation": "L-histidyl-L-alpha-amino acid(out) = L-histidyl-L-alpha-amino acid(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79379", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79379" } ] }, { "id": "79383", "name": "", "equation": "L-alpha-aminoacyl-L-lysine(out) = L-alpha-aminoacyl-L-lysine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79383", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79383" } ] }, { "id": "79387", "name": "", "equation": "L-lysyl-L-alpha-amino acid(out) = L-lysyl-L-alpha-amino acid(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79387", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79387" } ] }, { "id": "79391", "name": "", "equation": "L-arginyl-glycine(out) = L-arginyl-glycine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79391", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79391" } ] }, { "id": "79395", "name": "", "equation": "L-histidyl-glycine(out) = L-histidyl-glycine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79395", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79395" } ] }, { "id": "79399", "name": "", "equation": "L-lysyl-L-alanine(out) = L-lysyl-L-alanine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79399", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79399" } ] }, { "id": "79403", "name": "", "equation": "L-lysyl-L-lysine(out) = L-lysyl-L-lysine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79403", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79403" } ] }, { "id": "79407", "name": "", "equation": "L-lysyl-glycine(out) = L-lysyl-glycine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79407", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79407" } ] }, { "id": "79411", "name": "", "equation": "L-aspartyl-L-lysine(out) = L-aspartyl-L-lysine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79411", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79411" } ] }, { "id": "79415", "name": "", "equation": "L-alanyl-L-lysine(out) = L-alanyl-L-lysine(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "79415", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/79415" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LIQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIQ5" }, { "id": "PS50850", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50850" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Major facilitator superfamily (MFS) profile", "eco_id": "ECO_0000259", "start_pos": 45, "end_pos": 448, "start_aa": "Arg", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], 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"MSGSHIPSASGPFSALTPSMWPQEILAKYTQVQQLASQAPKEEAVEQPGICYDEFGFRMDKEDGDPRPGRLLDDPPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRALVLAGVPHSMRPQLWMRLSGALQKKRSSELTYRELVKNSSNDDTMAAKQIEKDLLRTMPSNACFASESSVGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVHIKLLLRLWDLFFYEGSLVLFQTTLGMLRLKEEELIQSENSASIFNTLSDIPSQMEDADLLLGEAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGTSTTTNLSQVVRRRTQRRKSGISSLLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYSMESHQRDHENYVACSRSHPRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLDERSKEYSIAGDDAVTEGVTDLVRGTLCPALKALFEHGLKKPSLLGGACHPWLFIEEAAGREVERDFDSVYSRLVLCKTYRLDEDGKVLTPEELLYRAVQSVNVTHDAAHAQMDVKLRSLICVGLNEQVLHLWLEVLCSSLATVEKWYQPWSFLRSPGWVQIKCELRVLCCFAFSLSQDWELPARREVGGRVGLGPCRLPPQGCRGAVWVSVLTDHPSCFSTAEALPRGGPE", "length": 773, "header": "tr|I3LKE4-1|I3LKE4_PIG Isoform 1 of Small G protein signaling modulator 3 OS=Sus scrofa OX=9823 GN=SGSM3 PE=3 SV=3 CANONICAL=I3LKE4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QGE4-1", "url": 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"https://www.uniprot.org/uniprotkb/I3LGH2", "locus": { "chromosome": "1", "start_pos": 100535993, "end_pos": 100514760, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024479", "url": "https://www.ensembl.org/id/ENSSSCG00000024479" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024479", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024479", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07717", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07717", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524839", "url": "https://www.ncbi.nlm.nih.gov/gene/100524839", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013471", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013471", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036866", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036866", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524839", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524839", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GTQRQMM", "url": "https://omabrowser.org/oma/group/GTQRQMM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LGH2", "url": "https://www.orthodb.org/?gene=I3LGH2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46018", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46018", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46018:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46018:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003121492", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121492", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QK48", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK48", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QK48-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK48-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGH2", "url": "https://www.uniprot.org/uniprotkb/I3LGH2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGH2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGH2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSMDVTFLGTGAAYPSPTRGASALVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVTKQPIEIYGPAGLRDFIWRTMELSHTELVFPYVVHELVPTADQCPTEELKEFAHANKVDSPPKEGQGRTILLDSEENSYLLVDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVIISPQDVLKKPIVGRKICILGDCSGVVDDGGVKLCFEADLLIHEATLDDTQMDKAKEHGHSTPQMAATFAKLCQAKRLVLTHFSQRYKPVALAREGETDGIVELKKQAESVLDLQEVTLAEDFMVISIPIKK", "length": 363, "header": "tr|I3LGH2-1|I3LGH2_PIG Isoform 1 of Zinc phosphodiesterase ELAC protein 1 OS=Sus scrofa OX=9823 GN=ELAC1 PE=3 SV=2 CANONICAL=I3LGH2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QK48-1", "url": "https://www.uniprot.org/uniprotkb/I3LGH2/entry#A0A5G2QK48-1", "sequence": { "sequence": "MSMDVTFLGTGAAYPSPTRGASALVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVTKQPIEIYGPAGLRDFIWRTMELSHTELVFPYVVHELVPTADQCPTEELKEFAHANKVDSPPKEGQGRTILLDSEENSYLLVDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVFCFCFLSHQ", "length": 219, "header": "tr|A0A5G2QK48-1|I3LGH2_PIG Computationally mapped isoform of Zinc phosphodiesterase ELAC protein 1 OS=Sus scrofa OX=9823 GN=ELAC1 PE=3 SV=1 CANONICAL=I3LGH2-1" }, "locus": { "chromosome": "1", "start_pos": 100529226, "end_pos": 100521819, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078541.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078541.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062432.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062432.1" } ] } }, { "isoform_ac": "I3LGH2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGH2/entry#I3LGH2-1", "sequence": { "sequence": "MSMDVTFLGTGAAYPSPTRGASALVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVTKQPIEIYGPAGLRDFIWRTMELSHTELVFPYVVHELVPTADQCPTEELKEFAHANKVDSPPKEGQGRTILLDSEENSYLLVDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVIISPQDVLKKPIVGRKICILGDCSGVVDDGGVKLCFEADLLIHEATLDDTQMDKAKEHGHSTPQMAATFAKLCQAKRLVLTHFSQRYKPVALAREGETDGIVELKKQAESVLDLQEVTLAEDFMVISIPIKK", "length": 363, "header": "tr|I3LGH2-1|I3LGH2_PIG Isoform 1 of Zinc phosphodiesterase ELAC protein 1 OS=Sus scrofa OX=9823 GN=ELAC1 PE=3 SV=2 CANONICAL=I3LGH2-1" }, "locus": { "chromosome": "1", "start_pos": 100531416, "end_pos": 100521819, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026385.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026385.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023166.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023166.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 18, "start_aa": "Thr", "end_pos": 18, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr18", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QK48", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK48" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524839", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524839", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7FCI7-1", "protein_name": "Zinc phosphodiesterase ELAC protein 1", "gene_name": "Elac1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKGGVITLLHPRPDTAFLETEERLGSTNHPGWKMSMDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVTRQPIEIYGPVGLRDFIWRTMELSHTELVFPYVVHEIVPTADQCPVEELKECSHVNDADSSSKGQGRTILLDTEENSYCLVDDEQFVVKAFRLFHRIPSFGFSVVEKKRAGKLNAQKLKDLGVPPGPAYGKLKNGISVVLDNGVTISPQDVLKKPMVGRKICILGDCSGVVGDSGVKLCFEADLLIHEATLDDSQMDKAKEHGHSTPQMAAAFAKLCRAKRLVLTHFSQRYKPTALAREGETDGIAELKKQAEAVLGLQEVTLAEDFMVIGIPIKK", "length": 395 }, "evidence": [ { "id": "I3LGH2", "url": "https://omabrowser.org/oma/group/I3LGH2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3ZB91-1", "protein_name": "Zinc phosphodiesterase ELAC protein 1", "gene_name": "Elac1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVSRQPIEIYGPVGLRDFIWRTMELSHTELVFPYVVHELVPTADQCPVEELRESAQMDEADSSPKGQGRTILLDAEENSYCLVDDEQFVVKAFRLFHRIPSFGFSVVEKKRTGKLSAQKLRDLGVPPGPAYGKLKNGISVVLDNGVTISPQDVLKKPMVGRKVCILGDCSGVVGDGGVKLCFEADLLIHEATLDDSQMDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPTALAREGEADGITELKKQAESVLELQEVTLAEDFMVIGIPIKK", "length": 362 }, "evidence": [ { "id": "I3LGH2", "url": "https://omabrowser.org/oma/group/I3LGH2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q29RY4-1", "protein_name": "Zinc phosphodiesterase ELAC protein 1", "gene_name": "ELAC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSMDVTFLGTGAAYPSPTRGASALVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVTKQPIEIYGPVGLRDFIWRTMELSHTELVFPYVVHELVPTADQCPTEELQESVQVDKTDNPPKEGEGRTILLDSEENSYLLVDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVDDAGVKLCFEADLLIHEATLDDTQMDKAKEHGHSTPQMAATFAKLCQAKRLVLTHFSQRYKPVALAREGEADGIVELKKQAESVLDLQEVTLAEDFMVISIPIKK", "length": 363 }, "evidence": [ { "id": "I3LGH2", "url": "https://omabrowser.org/oma/group/I3LGH2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8VEB6-1", "protein_name": "Zinc phosphodiesterase ELAC protein 1", "gene_name": "Elac1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVARQPIEIYGPVGLRDFIWRTMELSHTELVFPYVVHELVPTADQCPVEELREFAHMDETDSSPKGQGRTILLDAEENSYCLVDDEQFVVKAFRLFHRIPSFGFSVVEKKRAGKLNAQKLRDLGVPPGPAYGKLKNGISVVLDNGVTISPQDVLKKPMVGRKVCILGDCSGVVGDGGVKLCFEADLLIHEATLDDSQMDKAREHGHSTPQMAAAFAKLCRAKRLVLTHFSQRYKPTALAREGEADGIAELRKQAEAVLELQEVTLAEDFMVIGIPIKK", "length": 362 }, "evidence": [ { "id": "I3LGH2", "url": "https://omabrowser.org/oma/group/I3LGH2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H777-1", "protein_name": "Zinc phosphodiesterase ELAC protein 1", "gene_name": "ELAC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSMDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDAQMDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVISIPIKK", "length": 363 }, "evidence": [ { "id": "I3LGH2", "url": "https://omabrowser.org/oma/group/I3LGH2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LGH2", "url": "https://www.uniprot.org/uniprotkb/I3LGH2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LGH2", "url": "https://www.uniprot.org/uniprotkb/I3LGH2" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LGH2", "url": "https://www.uniprot.org/uniprotkb/I3LGH2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LGH2", "url": "https://www.uniprot.org/uniprotkb/I3LGH2" } ], "pmid": "" }, { "name": "3'-tRNA processing endoribonuclease activity", "id": "GO:0042781", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042781", "evidence": [ { "database": "UniProtKB", "id": "I3LGH2", "url": "https://www.uniprot.org/uniprotkb/I3LGH2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "rescue of stalled ribosome", "id": "GO:0072344", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072344", "evidence": [ { "database": "UniProtKB", "id": "I3LGH2", "url": "https://www.uniprot.org/uniprotkb/I3LGH2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 18 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LIX0-1", "uniprot_ac": "I3LIX0", "uniprot_id": "I3LIX0_PIG", "mass": { "chemical_mass": 115933.0, "monoisotopic_mass": 115933.0 }, "refseq": { "ac": "XP_020925130", "name": "golgin subfamily A member 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925130" }, "gene_names": [ { "name": "GOLGA2", "type": "recommended", "evidence": [ { "id": "I3LIX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" } ] }, { "name": "GOLGA2", "type": "synonym", "evidence": [ { "id": "XP_020925130", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925130" } ] } ], "protein_names": [ { "name": "Golgin subfamily A conserved domain-containing protein", "type": "recommended", "evidence": [ { "id": "I3LIX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIX0/entry#names_and_taxonomy" } ] }, { "name": "golgin subfamily A member 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020925130", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925130" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LIX0", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GOLGA2", "url": "https://www.uniprot.org/uniprotkb/I3LIX0", "locus": {} } ], "crossref": [ { "id": "I3LIX0", "url": "https://alphafold.ebi.ac.uk/entry/I3LIX0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005643", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005643", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100152721", "url": "https://www.ncbi.nlm.nih.gov/gene/100152721", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR024858", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024858", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043937", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043937", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043976", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043976", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152721", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152721", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IQVIIAE", "url": "https://omabrowser.org/oma/group/IQVIIAE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LIX0", "url": "https://www.orthodb.org/?gene=I3LIX0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10881", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10881", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10881:SF46", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10881:SF46", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15070", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15070", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-162658", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162658", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-204005", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204005", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6807878", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807878", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020925130", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925130", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QR08", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR08", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QR08-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR08-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RRA0", "url": "https://www.uniprot.org/uniprotkb/F1RRA0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RRA0-1", "url": "https://www.uniprot.org/uniprotkb/F1RRA0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9Y2", "url": "https://www.uniprot.org/uniprotkb/I3L9Y2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9Y2-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Y2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIX0", "url": "https://www.uniprot.org/uniprotkb/I3LIX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIX0-1", "url": "https://www.uniprot.org/uniprotkb/I3LIX0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LSP4", "url": "https://www.uniprot.org/uniprotkb/I3LSP4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LSP4-1", "url": "https://www.uniprot.org/uniprotkb/I3LSP4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWPPLPPPRPGMSEETRQSKLAAAKKKLREYQQKHSPGVPAGAKKKRKIKNGSSPETTTSGDCPTPEDIQDILKVLVSDLNRSNGVAIPPLDKWKAPKDSADLVTSSADDTVSPGGVLSPCASPLRGTSMATTQNHDAENGPVPIDENTSFSSTESLRQLSQQLNGLVSESSPYINGEGLASPANIKKLESRYHELSLALDSSNLTNKQLSSKIEELKQENQETLDQLEKEKKEFEQKLAKEQGALREQLQVHIQTIGILVSEKTELQTALAHTQQAARQKAGESENLASRLQSSRQRVGELERTLSAVSTQQKQADRYNKELTKERDTLKLELYKNNKSNEDLKQQKSELEEKLRLMATEKAAMQLGMEELQKKLEMSELLLQQFSTQPTPDSSQQLQQALEERAQLETCVGQLQDSLRQLQAERDQYVANLKEDSTVWQHKMQQMNEQLNKLRAEKEHSMSQVQELETSLAELRNQAAPPSGPSETEQRLQAEAEQLQKEVESLARQLQAQVKDNENLSLLNQEQEQRLMELERAAECWGEQAEERKQMLESMQSDRTTISRALTQNRKLKEQLAELQNGFVRLSNENMEITSALHSEQHVKKELAKKLGQLQENLGELKETVEVKSQEAQDLQQQRDQYLGHLQQYVAAYQQLAAEKELLHKQMVLQTQLVDQLQHEDMQGRMAVETARQELQEAQGRLEAANQHNQQLQAQLTLMAVPGEGTELDIEDEDKAGEAPRPKLSVPEELDSREAVVEFFNSALASAEEEQARLRRELKEQKLRCQRLAHLVAPAQDGVEKEAPAPGTEGDSVSAPGTGGDSVPVETHQALQVAMDKLQGRFTELMQEKVDLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLHLVGERNEWQGKFLAAQNPAGEPTVAPPAPQELGAAENQGGLLEVSLSDNVEPTQGEALLGQTLTENPTAQQIMQLLREIQNPQERLGLGSNPCIPFFYRADDNDEVKIMVV", "length": 1032, "header": "tr|I3LIX0-1|I3LIX0_PIG Isoform 1 of Golgin subfamily A conserved domain-containing protein OS=Sus scrofa OX=9823 GN=GOLGA2 PE=1 SV=2 CANONICAL=I3LIX0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QR08-1", "url": "https://www.uniprot.org/uniprotkb/I3LIX0/entry#A0A5G2QR08-1", "sequence": { "sequence": "MFTFPPLPLAALREYQQKHSPGVPAGAKKKRKIKNGSSPETTTSGDCPTPEDIQDILKVLVSDLNRSNGVAIPPLDKWKAPKDSADLVTSSADDTVSPGGVLSPCASPLRGTSMATTQNHDAENGPVPIDENTSFSSTESLRQLSQQLNGLVSEVPPTWSPEGAREGRKSRYHELSLALDSSNLTNKQLSSKIEELKQENQETLDQLEKEKKEFEQKLAKEQGALREQLQVHIQTIGILVSEKTELQTALAHTQQAARQKAGESENLASRLQSSRQRVGELERTLSAVSTQQKQADRYNKELTKERDTLKLELYKNNKSNEDLKQQKSELEEKLRLMATEKAAMQLGMEELQKKLEMSELLLQQFSTQPTPDSSQQLQQALEERAQLETCVGQLQDSLRQLQAERDQYVANLKEDSTVWQHKMQQMNEQLNKLRAEKEHSMSQVQELETSLAELRNQAAPPSGPSETEQRLQAEAEQLQKEVESLARQLQAQVKDNENLSLLNQEQEQRLMELERAAECWGEQAEERKQMLESMQSDRTTISRALTQNRKLKEQLAELQNGFVRLSNENMEITSALHSEQHVKKELAKKLGQLQENLGELKETVEVKSQEAQDLQQQRDQYLGHLQQYVAAYQQLAAEKELLHKQMVLQTQLVDQLQHEDMQGRMAVETARQELQEAQGRLEAANQHNQQLQAQLTLMAVPGEGTELDIEDEDKAGEAPRPKLSVPEELDSREAVVEFFNSALASAEEEQARLRRELKEQKLRCQRLAHLVAPAQDGVEKEAPAPGTEGDSVSAPGTGGDSVPVETHQALQVAMDKLQGRFTELMQEKVDLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLHLVGERNEWQGKFLAAQNPAGEPTVAPPAPQELGAAENQGGLLEVSLSDNVEPTQGEALLGQTLTENPTAQQIMQLLREIQNPQERLGLGSNPCIPFFYRADDNDEVKIMVV", "length": 1011, "header": "tr|A0A5G2QR08-1|I3LIX0_PIG Computationally mapped isoform of Golgin subfamily A conserved domain-containing protein OS=Sus scrofa OX=9823 GN=GOLGA2 PE=1 SV=1 CANONICAL=I3LIX0-1" }, "locus": { "chromosome": "1", "start_pos": 268718825, "end_pos": 268703590, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085850.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085850.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060714.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060714.1" } ] } }, { "isoform_ac": "F1RRA0-1", "url": "https://www.uniprot.org/uniprotkb/I3LIX0/entry#F1RRA0-1", "sequence": { "sequence": "QNHDAENGPVPIDENTSFSSTESLRQLSQQLNGLVSESSPYINGEGLASPANIKKLEKQENQETLDQLEKEKKEFEQKLAKEQGALREQLQVHIQTIGILVSEKTELQTALAHTQQAARQKAGESENLASRLQSSRQRVGELERTLSAVSTQQKQADRYNKELTKERDTLKLELYKNNKSNEDLKQQKSELEEKLRLMATEKAAMQLGMEELQKKLEMSELLLQQFSTQPTPDSSQQLQQALEERAQLETCVGQLQDSLRQLQAERDQYVANLKEDSTVWQHKMQQMNEQLNKLRAEKEHSMSQVQELETSLAELRNQAAPPSGPSETEQRLQAEAEQLQKEVESLARQLQAQVKDNENLSLLNQEQEQRLMELERAAECWGEQAEERKQMLESMQSDRTTISRALTQNRKLKEQLAELQNGFVRLSNENMEITSALHSEQHVKKELAKKLGQLQENLGELKETVEVKSQEAQDLQQQRDQYLGHLQQYVAAYQQLAAEKELLHKQMVLQTQLVDQLQHEDMQGRMAVETARQELQEAQGRLEAANQHNQQLQAQLTLMAVPGEGTELDIEDEDKAGEAPRPKLSVPEELDSREAVVEFFNSALASAEEEQARLRRELKEQKLRCQRLAHLVAPAQDGVEKEAPAPGTEGDSVSAPGTGGDSVPVETHQALQVAMDKLQGRFTELMQEKVDLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLHLVGERNEWQGKFLAAQNPAGEPTVAPPAPQELGAAENQGGLLEVSLSDNVEPTQGEALLGQTLTENPTAQQIMQLLREIQNPQERLGLGSNPCIPFFYRADDNDEVKIMVV", "length": 872, "header": "tr|F1RRA0-1|F1RRA0_PIG Computationally mapped isoform of Golgin subfamily A conserved domain-containing protein OS=Sus scrofa OX=9823 GN=GOLGA2 PE=1 SV=4 CANONICAL=I3LIX0-1" }, "locus": { "chromosome": "1", "start_pos": 268713964, "end_pos": 268703590, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006205.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006205.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006046.4", "url": "https://www.ensembl.org/id/ENSSSCP00000006046.4" } ] } }, { "isoform_ac": "I3L9Y2-1", "url": "https://www.uniprot.org/uniprotkb/I3LIX0/entry#I3L9Y2-1", "sequence": { "sequence": "MFTFPPLPLAALREYQQKHSPGVPAGAKKKRKIKNGSSPETTTSGDCPTPEDIQDILKVLVSDLNRSNGVAIPPLDKWKAPKDSADLVTSSADDTVSPGGVLSPCASPLRGTSMATTQNHDAENGPVPIDENTSFSSTESLRQLSQQLNGLVSESSPYINGEGLASPANIKKLEVSGAVSPLFPQEKKEFEQKLAKEQGALREQLQVHIQTIGILVSEKTELQTALAHTQQAARQKAGESENLASRLQSSRQRVGELERTLSAVSTQQKQADRYNKELTKERDTLKLELYKNNKSNEDLKQQKSELEEKLRLMATEKAAMQLGMEELQKKLEMSELLLQQFSTQPTPDSSQQLQQALEERAQLETCVGQLQDSLRQLQAERDQYVANLKEDSTVWQHKMQQMNEQLNKLRAEKEHSMSQVQELETSLAELRNQAAPPSGPSETEQRLQAEAEQLQKEVESLARQLQAQVKDNENLSLLNQEQEQRLMELERAAECWGEQAEERKQMLESMQSDRTTISRALTQNRKLKEQLAELQNGFVRLSNENMEITSALHSEQHVKKELAKKLGQLQENLGELKETVEVKSQEAQDLQQQRDQYLGHLQQYVAAYQQLAAEKELLHKQMVLQTQLVDQLQHEDMQGRMAVETARQELQEAQGRLEAANQHNQQLQAQLTLMAVPGEGTELDIEDEDKAGEAPRPKLSVPEELDSREAVVEFFNSALASAEEEQARLRRELKEQKLRCQRLAHLVAPAQDGVEKEAPAPGTEGDSVSAPGTGGDSVPVETHQALQVAMDKLQGRFTELMQEKVDLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLHLVGERNEWQGKFLAAQNPAGEPTVAPPAPQELGAAENQGGLLEVSLSDNVEPTQGEALLGQTLTENPTAQQIMQLLREIQNPQERLGLGSNPCIPFFYRADDNDEVKIMVV", "length": 987, "header": "tr|I3L9Y2-1|I3LIX0_PIG Computationally mapped isoform of Golgin subfamily A conserved domain-containing protein OS=Sus scrofa OX=9823 GN=GOLGA2 PE=1 SV=3 CANONICAL=I3LIX0-1" }, "locus": { "chromosome": "1", "start_pos": 268718825, "end_pos": 268703590, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023782.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023782.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020846.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020846.3" } ] } }, { "isoform_ac": "I3LIX0-1", "url": "https://www.uniprot.org/uniprotkb/I3LIX0/entry#I3LIX0-1", "sequence": { "sequence": "MWPPLPPPRPGMSEETRQSKLAAAKKKLREYQQKHSPGVPAGAKKKRKIKNGSSPETTTSGDCPTPEDIQDILKVLVSDLNRSNGVAIPPLDKWKAPKDSADLVTSSADDTVSPGGVLSPCASPLRGTSMATTQNHDAENGPVPIDENTSFSSTESLRQLSQQLNGLVSESSPYINGEGLASPANIKKLESRYHELSLALDSSNLTNKQLSSKIEELKQENQETLDQLEKEKKEFEQKLAKEQGALREQLQVHIQTIGILVSEKTELQTALAHTQQAARQKAGESENLASRLQSSRQRVGELERTLSAVSTQQKQADRYNKELTKERDTLKLELYKNNKSNEDLKQQKSELEEKLRLMATEKAAMQLGMEELQKKLEMSELLLQQFSTQPTPDSSQQLQQALEERAQLETCVGQLQDSLRQLQAERDQYVANLKEDSTVWQHKMQQMNEQLNKLRAEKEHSMSQVQELETSLAELRNQAAPPSGPSETEQRLQAEAEQLQKEVESLARQLQAQVKDNENLSLLNQEQEQRLMELERAAECWGEQAEERKQMLESMQSDRTTISRALTQNRKLKEQLAELQNGFVRLSNENMEITSALHSEQHVKKELAKKLGQLQENLGELKETVEVKSQEAQDLQQQRDQYLGHLQQYVAAYQQLAAEKELLHKQMVLQTQLVDQLQHEDMQGRMAVETARQELQEAQGRLEAANQHNQQLQAQLTLMAVPGEGTELDIEDEDKAGEAPRPKLSVPEELDSREAVVEFFNSALASAEEEQARLRRELKEQKLRCQRLAHLVAPAQDGVEKEAPAPGTEGDSVSAPGTGGDSVPVETHQALQVAMDKLQGRFTELMQEKVDLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLHLVGERNEWQGKFLAAQNPAGEPTVAPPAPQELGAAENQGGLLEVSLSDNVEPTQGEALLGQTLTENPTAQQIMQLLREIQNPQERLGLGSNPCIPFFYRADDNDEVKIMVV", "length": 1032, "header": "tr|I3LIX0-1|I3LIX0_PIG Isoform 1 of Golgin subfamily A conserved domain-containing protein OS=Sus scrofa OX=9823 GN=GOLGA2 PE=1 SV=2 CANONICAL=I3LIX0-1" }, "locus": { "chromosome": "1", "start_pos": 268720095, "end_pos": 268703590, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028840.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028840.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024027.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024027.2" } ] } }, { "isoform_ac": "I3LSP4-1", "url": "https://www.uniprot.org/uniprotkb/I3LIX0/entry#I3LSP4-1", "sequence": { "sequence": "MWPPLPPPRPGMSEETRQSKLAAAKKKLREYQQKHSPGVPAGAKKKRKIKNGSSPETTTSGDCPTPEDAPKDSADLVTSSADDTVSPGGVLSPCASPLRGTSMATTQNHDAENGPVPIDENTSFSSTESLRQLSQQLNGLVSESSPYINGEGLASPANIKKLESRYHELSLALDSSNLTNKQLSSKIEELKQENQETLDQLEKEKKEFEQKLAKEQGALREQLQVHIQTIGILVSEKTELQTALAHTQQAARQKAGESENLASRLQSSRQRVGELERTLSAVSTQQKQADRYNKELTKERDTLKLELYKNNKSNEDLKQQKSELEEKLRLMATEKAAMQLGMEELQKKLEMSELLLQQFSTQPTPDSSQQLQQALEERAQLETCVGQLQDSLRQLQAERDQYVANLKEDSTVWQHKMQQMNEQLNKLRAEKEHSMSQVQELETSLAELRNQAAPPSGPSETEQRLQAEAEQLQKEVESLARQLQAQVKDNENLSLLNQEQEQRLMELERAAECWGEQAEERKQMLESMQSDRTTISRALTQNRKLKEQLAELQNGFVRLSNENMEITSALHSEQHVKKELAKKLGQLQENLGELKETVEVKSQEAQDLQQQRDQYLGHLQQYVAAYQQLAAEKELLHKQMVLQTQLVDQLQHEDMQGRMAVETARQELQEAQGRLEAANQHNQQLQAQLTLMAVPGEGTELDIEDEDKAGEAPRPKLSVPEELDSREAVVEFFNSALASAEEEQARLRRELKEQKLRCQRLAHLVAPAQDGVEKEAPAPGTEGDSVSAPGTGGDSVPVETHQALQVAMDKLQGRFTELMQEKVDLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLHLVGERNEWQGKFLAAQNPAGEPTVAPPAPQELGAAENQGGLLEVSLSDNVEPTQGEALLGQTLTENPTAQQIMQLLREIQNPQERLGLGSNPCIPFFYRADDNDEVKIMVV", "length": 1005, "header": "tr|I3LSP4-1|I3LIX0_PIG Computationally mapped isoform of Golgin subfamily A conserved domain-containing protein OS=Sus scrofa OX=9823 GN=GOLGA2 PE=1 SV=2 CANONICAL=I3LIX0-1" }, "locus": { "chromosome": "1", "start_pos": 268720095, "end_pos": 268703590, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029025.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029025.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027137.2", "url": "https://www.ensembl.org/id/ENSSSCP00000027137.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 391, "start_aa": "Thr", "end_pos": 391, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr391", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 65, "start_aa": "Thr", "end_pos": 65, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr65", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 974, "start_aa": "Thr", "end_pos": 974, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr974", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QR08", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QR08" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152721", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152721", "resource": "KEGG Pathway" }, { "id": "R-SSC-162658", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162658", "resource": "Reactome", "description": "Golgi Cisternae Pericentriolar Stack Reorganization" }, { "id": "R-SSC-204005", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204005", "resource": "Reactome", "description": "COPII-mediated vesicle transport" }, { "id": "R-SSC-6807878", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807878", "resource": "Reactome", "description": "COPI-mediated anterograde transport" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LTM9-1", "protein_name": "Golgin A2", "gene_name": "GOLGA2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MWPPLPPPRPGMSEETRQSKLAAAKKKLREYQQKNSPGVPAGAKKKRKIKNGSSPETTTSGDCPSPEDIQDILEVLVSDLNRSNGVAIPPLDKWKAPKDRAAPVTPSADDTVSPGGVPSPSASPPRVTSMASTQNHDADNGSGPIDESTSFSSTEGLRQLSQQLNGLVSESSSYINGEGLASPANIKNLESRYQELSVALDSSNLTNKQLSSKIEELKQENQETLDQLEKEKKEFEQKLAKEQGALREQLQVHIQTIGILVSEKTELQTALAHTQQAARQKAGESEDLANRLQSSRQRVGELERTLSAVSTQQKQADRYNKELTRERDALKLELYKNNKNNEDLKQHNSELEEKLRLLVIEKSAMKLGIEELQKKLEMSELLLQQFSSQPAPDSSQQLQQALEERAQLETHMEQLKDSLRQLQAERDQYATNLKEENAIWQQKMQQVLEQMSKLKEEKERSVCQAQELETSLAELRNQIAAPPPQEPPAGPSEAEQRLQAETERLQKELESLAGQLQAQVKDNESLSHLNQEQEQRLLELEREAECWGEQAEERKQILETMQSDRTTISRALSQNRELKEQLAELQNGFVRLSNENMEVTSALQSEQHIKKELAKKLGQLQEKLGELKETVEVKGQEVQDLQQQRDEYLNHLQYYVAAYQLHMAACQQLASDKEALHKQVLLQTQLMDRLQHEEVQGKVAMEAARQELQETQERLEAANQQNQQLQAQLTLMAVPGEGDGLESEEQDEEAPRPKLSVPEELESREALVEFFHSALASAEDEQARLRRQLKEQKLHCQRLCHLAATAQDGVEKEAPAPRTGGDSVPAEAHQALQVAMDKLQGRFTELMQEKVDLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKARHQEKEEYISRLAQDKEEMKVKLLELQELVLCLVGERNEWYGKFLAAQNPAGEPTTAPHTCQEPSTADSEGGLQEVSLADTVEPQQGTLPGQTTPENPTAQQIMQLLREIQNPQEHPGLGSNPCIPFFYRADDNDEVKIMVI", "length": 1032 }, "evidence": [ { "id": "I3LIX0", "url": "https://omabrowser.org/oma/group/I3LIX0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A1IH00-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "golga2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADQNRQIKLAAAKKKLKEFQQKTIPSTGSAGPKKKRKVKGDQTDAPADRRSPENERVDVSQELEEAGAEHVSNPASAINTDNSAPQNYPADANGDEHPLENNRPLSSTESLRQLSQQLNGLLSESSTHINGDSDPPAVNEKELETRNQELSAALDSSALTNTQLTSKLETLTKQSQELSDQLQKERKEFEQKFTKEQGAMREQLQVHIQTIGILVSEKSELQTALSYTQQAARQKAAEAEDLSSRLQASKQRVSELERTLSSVSTQQKQHERHNKELEKERDSLRLEIIRFNNVSEESRQQSSELSEQLKLRVNENSALKLELEDLRKRLEMADVMLQQFSSQSGPPSEHQQLQLLLEEKHQLENHATQLMESVAQLQAERDQYAVQMQEDGRVWKDKTEQLLSQVRLMSEERDSTAAQILELQERIMELENTAAVMSTEQEPQASSQLSGPSETELALQETLRSLQEERDALSLQFQAQVRDNEQLSRLVQEQEVKLQELERQAERASEDAQDRLRILEDVQSDKATISRALTQNRELKDQLAELQNGFVKLTNENMELTSALQSEQHVKKEIARKMGQLQEDLHNAKEQLLESSSELTSVQEQRDQYLAHLQQYSAGYQQLLAEREHLQKQFLQQTQLMDRLQHDEVQGKVQLEQSHMQLQEVQEKLSRLVRDNEELKTEVQELLNGSIMNTSHRDEGDGLESQTLPESFQKSQIAIPEDFESREEMKEFIHSVLSRVEAERDEMSRRLEEERRIHQDTRQQLTALSHDHHHHHHHEPHSTCAETDGSEGVPVEVHEALRVAMEKLQERFTKLMQEKADLKERLEELEHRCIQLSGETDTIGEYIALYQNQRAIMKQKHVEKEQYINMLAKDKEEMKTKLAELQDLVMRLVGERNEWYSRYMSAVGNRDLLNSNAEQIHPAERRMEISGVDAPAVLDMSTAMDVSSSPQSSTAEIQSQSSERPAADPISSPSLRPQEDGTARQIMQLLQEIQNPQSRPAPFLGENPCIPFFYRPDEHDEVKILVV", "length": 1028 }, "evidence": [ { "id": "I3LIX0", "url": "https://omabrowser.org/oma/group/I3LIX0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWPQPRLPPRPAMSEETRQSKLAAAKKKLREYQQRNSPGVPTGAKKKKKIKNGSNPETTTSGGCHSPEDTPKDNAATLQPSDDTVLPGGVPSPGASLTSMAASQNHDADNVPNLMDETKTFSSTESLRQLSQQLNGLVCESATCVNGEGPASSANLKDLESRYQQLAVALDSSYVTNKQLNITIEKLKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMAEPPPPEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGEGDGLDREEEEDEEEEEEEAVAVPQPMPSIPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGETHRALQGAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGDRNEWHGRFLAAAQNPADEPTSGAPAPQELGAANQQGDLCEVSLAGSVEPAQGEAREGSPRDNPTAQQIMQLLREMQNPRERPGLGSNPCIPFFYRADENDEVKITVI", "length": 1002 }, "evidence": [ { "id": "I3LIX0", "url": "https://omabrowser.org/oma/group/I3LIX0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q62839-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "Golga2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWPPRFPPPRPGMSEETRQSKLAAAKKKLREYQQKNSPGVPAGAKKKKKIKNGHSPERTSASDCQSAENVPTDHTAPAPPSTAAATMFLGVVPSPDADLIQSHDAGNCSNLMEETKTFSSTESLRQLSQQLNGLVSESTSYINGEGLTSSNMKELESRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGALREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNGKSNEDLRQQNSELEEKLRVLVAEKAAAQLGAEELQKKLEMSELLLQQFSSQSEASGSNEQLQQAMEERAQLESHVGQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHALKEEKEQRESQVQELEASLAELRSQMEEPPPPEPPTGPSEAEERLQGEVEQLQKELEGLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQHWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLTAYEQLTSEKEALHKQLLLQTQLMDQLQHEEVQGKMAAEMARQELQEAQERLKASSQENQQLQAQLSLLVLPGEDMDQEEQDEEVPQPSLTIPEDLVSREAMVAFCNAAIARAEEEQARLRVQLREQKARCRSLAHLAAPVQSKLEKEAVVPRDMGDSVSEESNQALHVAMEKLQNRFLEVMQEKVELKERVEELEHCCIQLSGETDTIGEYIALYQNQRAVLKARHLEKEEYISRLAQDKEEMKVKLLELQELVLRLVNERNEWQGKFLAVSQNPADVPAPVPTGSQEFGAADQQGDLREVSLADDTEPAQGEAGVPAPQENPTAQQIMQLLREIQNPQERPGLGSNPCIPFFYRADENDEVKIMVI", "length": 998 }, "evidence": [ { "id": "I3LIX0", "url": "https://omabrowser.org/oma/group/I3LIX0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q921M4-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "Golga2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWPPRFPPPRPGMSEETRQSKLAAAKKKLREYQQKNSPGVPAGAKKKKKIKNGHSPERPTASDCQSPENVPTDHIAPAPPTAATDTMFLGVTPSPDADLTQSHDAGNCSNLMEETKTFSSTESLRQLSQQLNGLVSESTSYINGEGLTSSNMKELENRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQLEKEKKDYQQKLAKEQGSLREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLASRLQSSRQRVGELERTLSTVSTQQKQADRYNKDLTKERDALKLELYKNSKSNEDLRQQNSELEEKLRVLVAEKAAAQLGVEELQKKLEMSELLLQQFSSQSSAAGGNEQLQHAMEERAQLETHVSQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHTLKEEKEHRERQVQELETSLAALRSQMEEPPPPEPPAGPSEAEEQLQGEVEQLHKELERLTGQLRAQVQDNESLSHLNREQEGRLLELEREAQRWSEQAEERKQILESMQSDRTTISRALSQNRELKEQLAELQNGFVRLTNENMEITSALQSEQHVKKELARKLGELQERLGELKETVELKSQEAQGLQEQRDQCLSHLQQYAAAYQQHLAAYEQLTSEKEAIHKQLLLQTQLMDQLQHEEVQGKMAAELARQELQEAQERLKATSQENQQLQAQLSLLVLPGEGDVDQEEEDEEVPQSSLAIPEDLDSREAMVAFFNAAIARAEEEQARLRVQLKEQKARCRSLSHLAAPVQSKLEKEAVVPRNVDDSASEESNQALHVAMEKLQSRFLEVMQEKVELKERVEELEHCCIQLSGETDTIGEYIALYQNQRAVLKARHLEKEEYISRLAQDKEEMKVKLLELQELVLRLVNERNEWQGKFLAVSQNPGDVLTPVPTGSQEFGAADQQDDLREVSLADDIEPAQGEAGVPAPHENPTAQQIMQLLREIQNPRERPGLGSNPCIPFFYRADENDEVKIMVV", "length": 999 }, "evidence": [ { "id": "I3LIX0", "url": "https://omabrowser.org/oma/group/I3LIX0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9W289-1", "protein_name": "Golgi matrix protein 130 kD", "gene_name": "GM130", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPDDTQDAKAQKLAAARKKLKEYQQRASNNNGQPGAEEPVAATTQSHSSTVSISSNLSERSDSEINVNGGGAGGTQPPEQSALPTAASYFAQNESEHNGGLADASSLQAIQVIIAEKAQLNAELTKVRLACRERELELEELRILKDQNQLRLEQLQQHCQDQQSTGEQQRQQYAQLQAQLLQSQAQIKDQQSHLNELEAQLKQSNQHQEELQQQLSQKSNELEMAQLKLRQLSDESSVTTDNRVESLVQTQYMYEQQIRDLQAMVGQLTQDKEQAAGQYQNYVQHQSGEIAKLNERNTELSEVLNSLRERERQLVEHVGALERDIQKNISLQAQFKEASQVQPSKEETSEQKALKDELAVLKEQIENFEFERHEFQLKIKSQDDQLQLKNSALDELEKQLERLQAEQPDQSKLLATMESDKVAASRALTQNVEMKNQLDELQQRFVQLTNDKAELVIRLDSEEFANREIRQNYNSMEQKLQANEERFKFKDEEMIRLSHENVELQRQQLMLQQQLDRLRHYEAKAYHAGEETEKENGADAPENEAEEAKEVGLLHNHSHDHSHQHSDGHCHDNDHDHSHEHNHHNAGDHGHPHDHPHDHTHDHSHSHPHDHQHDHPHDHGQNHAHRQAAETLPTAEAVERLQSRFTTLISQVADLTEEKHSLEHLVLQLQSETETIGEYIALYQTQRRMLKQREYEKAAQMRLLQAEREQLREKIEALNKLVVSLGVELPADAAQAKQPEAAAGSEHTPGEGENSQQIINKIQDIISEIKENTEQPSHNHAGDHLNCCMGKFEVV", "length": 795 }, "evidence": [ { "id": "I3LIX0", "url": "https://omabrowser.org/oma/group/I3LIX0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cis-Golgi network", "id": "GO:0005801", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005801", "evidence": [ { "database": "UniProtKB", "id": "I3LIX0", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" } ], "pmid": "" }, { "name": "Golgi cisterna membrane", "id": "GO:0032580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032580", "evidence": [ { "database": "UniProtKB", "id": "I3LIX0", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" } ], "pmid": "" }, { "name": "Golgi cis cisterna", "id": "GO:0000137", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000137", "evidence": [ { "database": "UniProtKB", "id": "I3LIX0", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" } ], "pmid": "" }, { "name": "endoplasmic reticulum exit site", "id": "GO:0070971", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070971", "evidence": [ { "database": "UniProtKB", "id": "I3LIX0", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "Golgi organization", "id": "GO:0007030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007030", "evidence": [ { "database": "UniProtKB", "id": "I3LIX0", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 148, "end_pos": 150, "annotation": "n_glycosylation_sequon" }, { "start_pos": 204, "end_pos": 206, "annotation": "n_glycosylation_sequon" }, { "start_pos": 338, "end_pos": 340, "annotation": "n_glycosylation_sequon" }, { "start_pos": 519, "end_pos": 521, "annotation": "n_glycosylation_sequon" }, { "start_pos": 51, "end_pos": 53, "annotation": "n_glycosylation_sequon" }, { "start_pos": 81, "end_pos": 83, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LIX0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1032, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LIX0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LIX0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LIX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIX0" }, { "id": "PF15070", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15070" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Golgin subfamily A conserved", "eco_id": "ECO_0000259", "start_pos": 414, "end_pos": 937, "start_aa": "Gln", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 65, 391, 974 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 148, "end_pos": 150 }, { "start_pos": 204, "end_pos": 206 }, { "start_pos": 338, "end_pos": 340 }, { "start_pos": 519, "end_pos": 521 }, { "start_pos": 51, "end_pos": 53 }, { "start_pos": 81, "end_pos": 83 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ 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"N-acetylglucosamine-1-phosphotransferase subunits alpha/beta", "type": "recommended", "evidence": [ { "id": "I3LCF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#names_and_taxonomy" } ] }, { "name": "2.7.8.17", "type": "synonym", "evidence": [ { "id": "I3LCF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#names_and_taxonomy" } ] }, { "name": "GlcNAc-1-phosphotransferase subunits alpha/beta", "type": "synonym", "evidence": [ { "id": "I3LCF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#names_and_taxonomy" } ] }, { "name": "N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X7", "type": "synonym", "evidence": [ { "id": "XP_020948332", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948332" } ] }, { "name": "Stealth protein GNPTAB", "type": "synonym", "evidence": [ { "id": "I3LCF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#names_and_taxonomy" } ] }, { "name": "UDP-N-acetylglucosamine-1-phosphotransferase subunits alpha/beta", "type": "synonym", "evidence": [ { "id": "I3LCF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Catalyzes the formation of mannose 6-phosphate (M6P) markers on high mannose type oligosaccharides in the Golgi apparatus. M6P residues are required to bind to the M6P receptors (MPR), which mediate the vesicular transport of lysosomal enzymes to the endosomal/prelysosomal compartment.", "evidence": [ { "database": "UniProtKB", "id": "I3LCF5", "url": "https://www.uniprot.org/uniprotkb/I3LCF5#function" }, { "database": "UniProtKB", "id": "ARBA00057240", "url": "https://www.uniprot.org/uniprotkb/ARBA00057240#function" }, { "database": "UniProtKB", "id": "A0A287A9Y3", "url": "https://www.uniprot.org/uniprotkb/A0A287A9Y3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCF5", "url": "https://www.uniprot.org/uniprotkb/I3LCF5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GNPTAB", "url": "https://www.uniprot.org/uniprotkb/I3LCF5", "locus": { "chromosome": "5", "start_pos": 82460814, "end_pos": 82361872, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000862", "url": "https://www.ensembl.org/id/ENSSSCG00000000862" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000862", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000862", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21599", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21599", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd21600", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21600", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100523554", "url": "https://www.ncbi.nlm.nih.gov/gene/100523554", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000800", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000800", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010506", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010506", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021520", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021520", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031358", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031358", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041536", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041536", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047141", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047141", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24045", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24045", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24045:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24045:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00066", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00066", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06464", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06464", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF11380", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11380", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17101", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17101", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17102", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17102", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17103", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17103", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18440", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18440", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26737", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26737", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020948332", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948332", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "13581", "url": "https://www.rhea-db.org/rhea/13581", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A9Y3", "url": "https://www.uniprot.org/uniprotkb/A0A287A9Y3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A9Y3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A9Y3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVS8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVS8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVS8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVS8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RJM8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RJM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RJM8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RJM8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCF5", "url": "https://www.uniprot.org/uniprotkb/I3LCF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLKLLQRQTYTCLSHRYGLYVCFVGVVVTIVSAFQFGEVVLEWSRDQYHVLFDSYRDNIAGKSFQNREKQLECLLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDIFNIAKPKNPSTNVSVVVFDSTKNVEDAHTGMFKGNSKQTVWRGYLTTDKEVPGLVLMQDLAFLSGFPPTFKETNQLKTKLPENLSSKIKLLQLYSEASVALLKLNNPKDFQELNKQTKKNMTVDGKELTISPAYLLWDLSAISQSKQDEDVSASRFEDNEELRYSLRSIERHAPWVRNIFIVTNGQIPSWLNLDNPRVTIVTHQDVFRNLSHLPTFSSPAIESHIHRIEGLSQKFIYLNDDVMFGKDVWPDDFYSHSKGQKVYLTWPVPNCAEGCPGSWIKDGYCDKACNNSACDWDGGDCSGNSGGSRYIPGGGGTGSMGGGQPWHFGGGITGVSYCNQGCANSWLADKFCDQACNVLSCGFDAGDCGQDHFHELYKVTLLPNQTHYVIPKGECLPYFSFAEIAKRGIEGAYSDNPIIRHASIANKWKTIHLILHSGMNATTIHFNLTLQSTNGEEFKIQLAVEVDTREEPKRNSTTQKSYQDLVSPTVLLPEVEIPFEDIPEEKRFPKVKRHDANTTGKFQVEVEVPLVNISLLPKEAQLSLSNLDLQLELGDITLKGYNLSKSALLRPFLMNPRYAELAVNQAPVTGQRNDSMEAPLGKQVHRSIYPSSLGTPERSQGSLPLPAVTMRVNGHSQSQTPLDLETKARLRSQTLTQTMGGRSVSKEKFSSLIVSLEKKETQEKIITGKEQEKNRLGENANSHLGGDEVLPGRKLQYYTDSYLGFLPWEKKKYFQDLLDEEESLKTQLAYFTDSKHTGRHLKDTFADSLRYVNKILNSKFGFTSRKVPAHMPHMIDRIVMQELQDMFPEEFDKTSFHKVRHSEDMQFAFSYFYYLMSAVQPLNVSQVFDEVDTDQSGVLSDREIRTLATRIHDLPLSLQDLTGLEHMLINCSKMLPANITQLNNIPPTQEAYYDPNLPPVTKSLVTNCKPVTDKIHKAYKDKNKYRFEIMGEEEIAFKMIRTNVSHVVGQLDDIRKNPRKFVCLNDNIDHNHKDAQTVKAVLRDFYESMFPIPSQFELPREYRNRFLHMHELQEWRAYRDRLKFWTHCVLATLIMFTIVSFFAEQLIALKRKIFPRRRIHKEASPDRIRV", "length": 1203, "header": "tr|I3LCF5-1|I3LCF5_PIG Isoform 1 of N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Sus scrofa OX=9823 GN=GNPTAB PE=3 SV=2 CANONICAL=I3LCF5-1" }, "isoforms": [ { "isoform_ac": "A0A287A9Y3-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#A0A287A9Y3-1", "sequence": { "sequence": "MPIDVVYTWVNGTDLDLLKELQQVREQMEEEQKAMREILGKNTTEPTKKSEKQLECLLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDIFNIAKPKNPSTNVSVVVFDSTKNVEDAHTGMFKGNSKQTVWRGYLTTDKEVPGLVLMQDLAFLSGFPPTFKETNQLKTKLPENLSSKIKLLQLYSEASVALLKLNNPKDFQELNKQTKKNMTVDGKELTISPAYLLWDLSAISQSKQDEDVSASRFEDNEELRYSLRSIERHAPWVRNIFIVTNGQIPSWLNLDNPRVTIVTHQDVFRNLSHLPTFSSPAIESHIHRIEGLSQKFIYLNDDVMFGKDVWPDDFYSHSKGQKVYLTWPVPNCAEGCPGSWIKDGYCDKACNNSACDWDGGDCSGNSGGSRYIPGGGGTGSMGGGQPWHFGGGITGVSYCNQGCANSWLADKFCDQACNVLSCGFDAGDCGQDHFHELYKVTLLPNQTHYVIPKGECLPYFSFAEIAKRGIEGAYSDNPIIRHASIANKWKTIHLILHSGMNATTIHFNLTLQSTNGEEFKIQLAVEVDTREEPKRNSTTQKSYQDLVSPTVLLPEVEIPFEDIPEEKRFPKVKRHDANTTGKFQVEVEVPLVNISLLPKEAQLSLSNLDLQLELGDITLKGYNLSKSALLRPFLMNPRYAELAVNQAPVTGQRNDSMEAPLGKQVHRSIYPSSLGTPERSQGSLPLPAVTMRVNGHSQSQTPLDLETKARLRSQTLTQTMGGRSVSKEKFSSLIVSLEKKETQEKIITGKEQEKNRLGENANSHLGGDEVLPGRKLQYYTDSYLGFLPWEKKKYFQDLLDEEESLKTQLAYFTDSKHTGRHLKDTFADSLRYVNKILNSKFGFTSRKVPAHMPHMIDRIVMQELQDMFPEEFDKTSFHKVRHSEDMQFAFSYFYYLMSAVQPLNVSQVFDEVDTDQSGVLSDREIRTLATRIHDLPLSLQDLTGLEHMLINCSKMLPANITQLNNIPPTQEAYYDPNLPPVTKSLVTNCKPVTDKIHKAYKDKNKYRFEIMGEEEIAFKMIRTNVSHVVGQLDDIRKNPRKFVCLNDNIDHNHKDAQTVKAVLRDFYESMFPIPSQFELPREYRNRFLHMHELQEWRAYRDRLKFWTHCVLATLIMFTIVSFFAEQLIALKRKIFPRRRIHKEASPDRIRV", "length": 1185, "header": "tr|A0A287A9Y3-1|A0A287A9Y3_PIG Computationally mapped isoform of N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Sus scrofa OX=9823 GN=GNPTAB PE=3 SV=3 CANONICAL=I3LCF5-1" }, "locus": { "chromosome": "5", "start_pos": 82459456, "end_pos": 82403743, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065519.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065519.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040749.3", "url": "https://www.ensembl.org/id/ENSSSCP00000040749.3" } ] } }, { "isoform_ac": "A0A5G2QVS8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#A0A5G2QVS8-1", "sequence": { "sequence": "MLLKLLQRQTYTCLSHRYGLYVCFVGVVVTIVSAFQFGEVVLEWSRDQYHVLFDSYRDNIAGKSFQNRLCLPMPIDVVYTWVNGTDLDLLKELQQVREQMEEEQKAMREILGKNTTEPTKKSEKQLECLLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDIFNIAKPKNPSTNVSVVVFDSTKNVEDAHTGMFKGNSKQTVWRGYLTTDKEVPGLVLMQDLAFLSGFPPTFKETNQLKTKLPENLSSKIKLLQLYSEASVALLKLNNPKDFQELNKQTKKNMTVDGKELTISPAYLLWDLSAISQSKQDEDVSASRFEDNEELRYSLRSIERHAPWVRNIFIVTNGQIPSWLNLDNPRVTIVTHQDVFRNLSHLPTFSSPAIESHIHRIEGLSQKFIYLNDDVMFGKDVWPDDFYSHSKGQKVYLTWPVPNCAEGCPGSWIKDGYCDKACNNSACDWDGGDCSGEDSSMLTEFFVCLYC", "length": 485, "header": "tr|A0A5G2QVS8-1|I3LCF5_PIG Computationally mapped isoform of N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Sus scrofa OX=9823 GN=GNPTAB PE=3 SV=1 CANONICAL=I3LCF5-1" }, "locus": { "chromosome": "5", "start_pos": 82439230, "end_pos": 82362107, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074016.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074016.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062284.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062284.1" } ] } }, { "isoform_ac": "A0A5G2RJM8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#A0A5G2RJM8-1", "sequence": { "sequence": "MLLKLLQRQTYTCLSHRYGLYVCFVGVVVTIVSAFQFGEVVLEWSRDQYHVLFDSYRDNIAGKSFQNRSVKE", "length": 72, "header": "tr|A0A5G2RJM8-1|I3LCF5_PIG Computationally mapped isoform of N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Sus scrofa OX=9823 GN=GNPTAB PE=3 SV=1 CANONICAL=I3LCF5-1" }, "locus": { "chromosome": "5", "start_pos": 82385848, "end_pos": 82362107, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073525.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073525.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072104.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072104.1" } ] } }, { "isoform_ac": "I3LCF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF5/entry#I3LCF5-1", "sequence": { "sequence": "MLLKLLQRQTYTCLSHRYGLYVCFVGVVVTIVSAFQFGEVVLEWSRDQYHVLFDSYRDNIAGKSFQNREKQLECLLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDIFNIAKPKNPSTNVSVVVFDSTKNVEDAHTGMFKGNSKQTVWRGYLTTDKEVPGLVLMQDLAFLSGFPPTFKETNQLKTKLPENLSSKIKLLQLYSEASVALLKLNNPKDFQELNKQTKKNMTVDGKELTISPAYLLWDLSAISQSKQDEDVSASRFEDNEELRYSLRSIERHAPWVRNIFIVTNGQIPSWLNLDNPRVTIVTHQDVFRNLSHLPTFSSPAIESHIHRIEGLSQKFIYLNDDVMFGKDVWPDDFYSHSKGQKVYLTWPVPNCAEGCPGSWIKDGYCDKACNNSACDWDGGDCSGNSGGSRYIPGGGGTGSMGGGQPWHFGGGITGVSYCNQGCANSWLADKFCDQACNVLSCGFDAGDCGQDHFHELYKVTLLPNQTHYVIPKGECLPYFSFAEIAKRGIEGAYSDNPIIRHASIANKWKTIHLILHSGMNATTIHFNLTLQSTNGEEFKIQLAVEVDTREEPKRNSTTQKSYQDLVSPTVLLPEVEIPFEDIPEEKRFPKVKRHDANTTGKFQVEVEVPLVNISLLPKEAQLSLSNLDLQLELGDITLKGYNLSKSALLRPFLMNPRYAELAVNQAPVTGQRNDSMEAPLGKQVHRSIYPSSLGTPERSQGSLPLPAVTMRVNGHSQSQTPLDLETKARLRSQTLTQTMGGRSVSKEKFSSLIVSLEKKETQEKIITGKEQEKNRLGENANSHLGGDEVLPGRKLQYYTDSYLGFLPWEKKKYFQDLLDEEESLKTQLAYFTDSKHTGRHLKDTFADSLRYVNKILNSKFGFTSRKVPAHMPHMIDRIVMQELQDMFPEEFDKTSFHKVRHSEDMQFAFSYFYYLMSAVQPLNVSQVFDEVDTDQSGVLSDREIRTLATRIHDLPLSLQDLTGLEHMLINCSKMLPANITQLNNIPPTQEAYYDPNLPPVTKSLVTNCKPVTDKIHKAYKDKNKYRFEIMGEEEIAFKMIRTNVSHVVGQLDDIRKNPRKFVCLNDNIDHNHKDAQTVKAVLRDFYESMFPIPSQFELPREYRNRFLHMHELQEWRAYRDRLKFWTHCVLATLIMFTIVSFFAEQLIALKRKIFPRRRIHKEASPDRIRV", "length": 1203, "header": "tr|I3LCF5-1|I3LCF5_PIG Isoform 1 of N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Sus scrofa OX=9823 GN=GNPTAB PE=3 SV=2 CANONICAL=I3LCF5-1" }, "locus": { "chromosome": "5", "start_pos": 82459456, "end_pos": 82362107, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028915.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028915.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021730.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021730.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QVS8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVS8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "I3LCF5", "url": "https://www.uniprot.org/uniprotkb/I3LCF5" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { 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"PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1257604", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1257604", "resource": "Reactome", "description": "PIP3 activates AKT signaling" }, { "id": "R-SSC-6804757", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6804757", "resource": "Reactome", "description": "Regulation of TP53 Degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "Q5FVG6-1", "protein_name": "Proline-rich protein 5", "gene_name": "Prr5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"Protein Classification" ] }, { "id": "IPR000832", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000832", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001879", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001879", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002144", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002144", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017981", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017981", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017983", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017983", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036445", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036445", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047037", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047037", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050332", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050332", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45620", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45620", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45620:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45620:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00002", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00002", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02793", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02793", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BNA4", "url": "https://www.uniprot.org/uniprotkb/A0A287BNA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNA4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNA4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R597", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R597", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R597-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R597-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFB5", "url": "https://www.uniprot.org/uniprotkb/I3LFB5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFB5-1", "url": "https://www.uniprot.org/uniprotkb/I3LFB5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRAGWRPSGRRGSARGTMRLRLSPLLLLTCAAHTVGALPRLCDVLQVLREEREQCLQELSKERTGNLGMEQPAPGCEGLWDNMSCWPSSTPGQTVEVECPRFLWMLVGRNGSMFRNCTQDGWSETFPRPDLACGVNVNDSLSNEKRYQYLLKLKVMYTVGYSSSLVMLLVALSILCAFRRLHCTRNYIHMHLFVSFILRALSNFIKDAVLFSSDDAAHCDAHRYCIMANYSWLLVEGLYLHTLLVISFFSERKCLQGFVALGWGSPAIFVASWAITRHFLEDVGCWDINANASIWWLIRGPVILSILINFILFINILRILMRKLRTQEARGNEANHYKRLAKSTLLLIPLFGIHYIIFAFSPEDALEIQLFFELALGSFQGLVVAVLYCFLNGEVQLEVQKKWRQWHLHEFPLRPVALSSSFSNSTKASPSEQSQGTCRASVI", "length": 443, "header": "tr|I3LFB5-1|I3LFB5_PIG Isoform 1 of Secretin receptor OS=Sus scrofa OX=9823 GN=SCTR PE=3 SV=3 CANONICAL=I3LFB5-1" }, "isoforms": [ { "isoform_ac": "A0A287BNA4-1", "url": "https://www.uniprot.org/uniprotkb/I3LFB5/entry#A0A287BNA4-1", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/I3LFB5/entry#A0A5G2R597-1", "sequence": { "sequence": "SLHHLAPFLLVESPYVVGALPRLCDVLQVLREEREQCLQELSKERTGNLGMEQPAPGCEGLWDNMSCWPSSTPGQTVEVECPRFLWMLVGRNGSMFRNCTQDGWSETFPRPDLACGVNVNDSLSNEKRYQYLLKLKVMYTVGYSSSLVMLLVALSILCAFRRLHCTRNYIHMHLFVSFILRALSNFIKDAVLFSSDDAAHCDAHRYCIMANYSWLLVEGLYLHTLLVISFFSERKCLQGFVALGWGSPAIFVASWAITRHFLEDVGCWDINANASIWWLIRGPVILSILINFILFINILRILMRKLRTQEARGNEANHYKRLAKSTLLLIPLFGIHYIIFAFSPEDALEIQLFFELALGSFQGLVVAVLYCFLNGEVQLEVQKKWRQWHLHEFPLRPVALSSSFSNSTKASPSEQSQGTCRASVI", "length": 425, "header": "tr|A0A5G2R597-1|I3LFB5_PIG Computationally mapped isoform of Secretin receptor OS=Sus scrofa OX=9823 GN=SCTR PE=3 SV=1 CANONICAL=I3LFB5-1" }, "locus": { "chromosome": "15", "start_pos": 31782152, "end_pos": 31720717, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066716.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066716.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072399.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072399.1" } ] } }, { "isoform_ac": "I3LFB5-1", "url": "https://www.uniprot.org/uniprotkb/I3LFB5/entry#I3LFB5-1", "sequence": { "sequence": "MRAGWRPSGRRGSARGTMRLRLSPLLLLTCAAHTVGALPRLCDVLQVLREEREQCLQELSKERTGNLGMEQPAPGCEGLWDNMSCWPSSTPGQTVEVECPRFLWMLVGRNGSMFRNCTQDGWSETFPRPDLACGVNVNDSLSNEKRYQYLLKLKVMYTVGYSSSLVMLLVALSILCAFRRLHCTRNYIHMHLFVSFILRALSNFIKDAVLFSSDDAAHCDAHRYCIMANYSWLLVEGLYLHTLLVISFFSERKCLQGFVALGWGSPAIFVASWAITRHFLEDVGCWDINANASIWWLIRGPVILSILINFILFINILRILMRKLRTQEARGNEANHYKRLAKSTLLLIPLFGIHYIIFAFSPEDALEIQLFFELALGSFQGLVVAVLYCFLNGEVQLEVQKKWRQWHLHEFPLRPVALSSSFSNSTKASPSEQSQGTCRASVI", "length": 443, "header": "tr|I3LFB5-1|I3LFB5_PIG Isoform 1 of Secretin receptor OS=Sus scrofa OX=9823 GN=SCTR PE=3 SV=3 CANONICAL=I3LFB5-1" }, "locus": { "chromosome": "15", "start_pos": 31782152, "end_pos": 31707966, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029583.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029583.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022755.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022755.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 90, "start_aa": "Thr", "end_pos": 90, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr90", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R597", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R597" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "cell surface receptor signaling pathway", "id": "GO:0007166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007166", "evidence": [ { "database": "UniProtKB", "id": "I3LFB5", "url": 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"categories": [ "Protein Classification" ] }, { "id": "ssc:100625046", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625046", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YSVEVRY", "url": "https://omabrowser.org/oma/group/YSVEVRY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LHD8", "url": "https://www.orthodb.org/?gene=I3LHD8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19328", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19328", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19328:SF32", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19328:SF32", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00530", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00530", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03024", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03024", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07995", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07995", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020955348", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955348", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R9U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9U0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9U0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHD8", "url": "https://www.uniprot.org/uniprotkb/I3LHD8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHD8-1", "url": "https://www.uniprot.org/uniprotkb/I3LHD8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGRAGAGAGALLALLALRALGASAHPQCLDFRPPFRPPQPLHFCAQYSAFGCCAPEHDAALARRFGALAARVDPALWAECAGYALDLLCQECSPYAAHLYDAEDPATPLRTVPGLCEDYCLDMWQTCRGLIRHLSPDRELWALEGNRAKFCRYLSLDDVDYCFPRLLVNENLNSNLGRVVADAKGCLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQLGLVWAYLPDRSRLEKPFLNISRAVLTSPWEGDERGFLGLAFHPRFRHNGKLYVYYSVGVDFHEWIRISEFRVSEDDVNTVDHDSERIILEIEEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGKFGNAQNKSALLGKVLRIDVDRNERGPLYHIPPDNPFVGDPAARPEVYAFGVRNMWRCSFDRGDPASGAGRGRLFCGDVGQNKFEEVDLVERGRNYGWRAREGFECYDRKLCANTSLDDVLPIFAYPHKLGKSVTGGYVYRGCEYPNLNGLYIFGDFMSGRLMSLRENLGTGQWRYSEICMGRGQTCAFPGLINNYYPHVISFAEDEAGELYFMSTGVPSATVARGVVYKMIDPSRRAPPGKCQIQPAHVRLRSRLVPFVPKEKFIRRTESTPRPTARAPTTKAPRRSRPTAAPLAPTPRPARPTGRPGRRRGGGRRRGRPGTADPAPSNGAVRLVRPAGLSPGRGRVEVFAGGRWGTVCDDAWDTKAATVVCRQLGFAYAVRAAKRAEFGEGRALPILLDDVRCEGSERNLLECAHAGLGSHNCGHQEDAGVVCSREDPDL", "length": 789, "header": "tr|I3LHD8-1|I3LHD8_PIG Isoform 1 of HHIP like 1 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=I3LHD8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R9U0-1", "url": 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"ENSSSCT00000088223.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088223.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067365.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067365.2" } ] } }, { "isoform_ac": "I3LHD8-1", "url": "https://www.uniprot.org/uniprotkb/I3LHD8/entry#I3LHD8-1", "sequence": { "sequence": "MAGRAGAGAGALLALLALRALGASAHPQCLDFRPPFRPPQPLHFCAQYSAFGCCAPEHDAALARRFGALAARVDPALWAECAGYALDLLCQECSPYAAHLYDAEDPATPLRTVPGLCEDYCLDMWQTCRGLIRHLSPDRELWALEGNRAKFCRYLSLDDVDYCFPRLLVNENLNSNLGRVVADAKGCLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQLGLVWAYLPDRSRLEKPFLNISRAVLTSPWEGDERGFLGLAFHPRFRHNGKLYVYYSVGVDFHEWIRISEFRVSEDDVNTVDHDSERIILEIEEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGKFGNAQNKSALLGKVLRIDVDRNERGPLYHIPPDNPFVGDPAARPEVYAFGVRNMWRCSFDRGDPASGAGRGRLFCGDVGQNKFEEVDLVERGRNYGWRAREGFECYDRKLCANTSLDDVLPIFAYPHKLGKSVTGGYVYRGCEYPNLNGLYIFGDFMSGRLMSLRENLGTGQWRYSEICMGRGQTCAFPGLINNYYPHVISFAEDEAGELYFMSTGVPSATVARGVVYKMIDPSRRAPPGKCQIQPAHVRLRSRLVPFVPKEKFIRRTESTPRPTARAPTTKAPRRSRPTAAPLAPTPRPARPTGRPGRRRGGGRRRGRPGTADPAPSNGAVRLVRPAGLSPGRGRVEVFAGGRWGTVCDDAWDTKAATVVCRQLGFAYAVRAAKRAEFGEGRALPILLDDVRCEGSERNLLECAHAGLGSHNCGHQEDAGVVCSREDPDL", "length": 789, "header": "tr|I3LHD8-1|I3LHD8_PIG Isoform 1 of HHIP like 1 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=I3LHD8-1" }, "locus": { "chromosome": "7", "start_pos": 120654444, "end_pos": 120627510, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027310.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027310.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023484.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023484.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R9U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9U0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625046", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625046", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5NYI4-1", "protein_name": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "gene_name": "HHIPL1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRALRGAALALLLAAALGPGPGRPHPQCLDFKPPFRPPRALAFCRRYGAFGCCDARRDRALLQRFYRLSAHLDGPTYAACAGHLQDLLCQECSPYAAHLYDAEDPSTPVRTIPGLCQDYCQQVWQKCRSIFHYLSTDQELIALENNMAKFCRYLSLEDTDYCFPHLLANENLNQNLGLVTADAEGCLQLCLMEVANGLRNPVAMVHANDGTHRFFIAEQVGLVWAYLPDRSRLEKPFLNISEAVLTSPWEGDERGFLGIVFHPKFKFTGKVYVYYSVEVRYEERIRISEFRISSGDMNTVDHGSERIILEIEEPASNHNGGELLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRIDVNNNDRGPVYRIPPDNPFVDDPQARPEVYAYGVRNMWRCSFDRGEPDTKEGKGRLFCGDVGQNKYEEIDIVEKGKNYGWRAREGFSCYDKKLCVNSSLDDVLPIYAYPHKMGKSVTGGYVYRGCESPNLNGLYIFGDFMSGRLMSLKEDRATGEWQYSEICMGTGQTCMFPGLINNYYQYIISFAEDEAGELYFMSTGVPSATAPHGVVYKVVDTSRRAPPGKCQVEPLPVKVKSKLVKFVPKEKLIVKTPTPRPRLKTTTEAPRRGWPDHATPHTSALDRVDQAPVNRSVMLVPATAPSPRPGKGERKGQRRKKKPRNGAVRLMDGGSRGRSWGRVEVYVDGEWGTVCDDGWSSAAAAVVCRQLGFPYVVRASKKAEFGEGTLLRILLDDVQCSGQEKTLLECAHAEVGTHNCSHEEDAGVVCSREEVADW", "length": 797 }, "evidence": [ { "id": "I3LHD8", "url": "https://omabrowser.org/oma/group/I3LHD8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A9N1-1", "protein_name": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "gene_name": "Hhipl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARQRTVAGIGPGALLALRALLVAAHPQCLDFRPPFRPPQPLSFCAQYSAFGCCTAEQDAALARRFRALETRMDAGVWATCAGYALDLLCQECSPYAAHLYDAEDPATPLRTVPGLCEDYCLDMWQTCRGLFRHLSPDRELWALESNRAKLCRYLSLDDTDYCFPSLLVNENLNSNLGRVVADAKGCLQLCLEEVANGLRNPVAMVHAGDGSHRFFVAEQVGLVWTYLPDRSRLEKPFLNVSQAVLTSPWEGDERGFLGLAFHPRFPHPSKLYVYYSVGVGFREWIRISEFRISEDDENTVDHGSERIILEIEEPASNHNGGQLLFGDDGFLYIFTGDGGMAGDPFGKFGNAQNKSALLGKVLRIDVDRKERGLPYGIPLDNPFVDDPEARPEVYALGVRNMWRCSFDRGDPVSGTHRGRLFCGDVGQNKYEEVDLVERGRNYGWRAREGFECYDRKLCANASLDDVLPIFAYPHKLGKSVTGGYVYRGCEYPNLNGLYIFGDFMSGRLMSLRENPESGQWKYSEVCMGRGQTCAFPGLINNYYPYIISFAEDEAGELYFMSTGVPSATAARGVIYKVTDPSRRAPPGKCKIRPAQVKVKSHLIPFVPKEKFIRTSESTPRPTARAPTKAPRRRRPTAAPPAPTLRPTKPARPTRRPGARKGGGRRRGRPGTAVPEPQNGSVRLVRPSGLSPGRGRVEVFIGGRWGTVCDDGWDIKAAAVVCRQLGFAHAVRAAKRAEFGEGRALRILLDDVRCAGSERNLLECAHAGVGTHNCKHEEDAGVECSHEDPDL", "length": 791 }, "evidence": [ { "id": "I3LHD8", "url": "https://omabrowser.org/oma/group/I3LHD8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MI35-1", "protein_name": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "gene_name": "HHIPL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGRRAGAGAGAGTLLALLVLRALGAAAHPQCLDFRPPFRPPQPLRFCSQYSAFGCCTPEQDAALARRFGAVAARVDAAMWAECAGYALDLLCQECSPYVAHLYDAEDPSTPLRTVPGLCEDYCLDMWQTCRGLFRHLSPDRELWALEGNRAKLCRSLSLDDTDYCFPRLLVNENLNSNLGRVVADAEGCLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQLGLVWVYLPDRSRLEKPFLNISRAVLTSPWEGDERGFLGLAFHPSFRHNGKLYVYYSVGVGFDEWIRISEFRVSEDDVNAVDHDSERIILEIEEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGKFGNAQNKSALLGKVLRIDVDRNERGPLYRIPPDNPFVGDPAARPEVYAFGVRNMWRCSFDRGDPATGAGRGRLFCGDVGQNKFEEVDLVERGRNYGWRAREGYQCYDRKLCANASLDDVLPIFAYPHKLGKSVTGGYVYRGCEYPNLNGLYVFGDFMSGRLMSLRENPETGQWRYSEICMGRGQTCAFPGLINNYYPHIISFGEDEAGELYFMSTGMPSATVAHGVVYKMIDPSRRAPPGKCQIQPSRVKVRSRLIHFVPKEKFIRRTESTPRPTKAPRRSRPTAAPPAPTPRPPRPTSRPGRRRGSGRRRGRLGTADPEPSNGAVRLVRPAGLSPGRGRVEVFAGGRWGTVCDDAWDTKAAAVVCRQLGFLYAARAAKRAEFGEGRTLPILLDDVRCTGSERNLLECAHAGLGSHNCGHQEDAGVVCSREDPDL", "length": 786 }, "evidence": [ { "id": "I3LHD8", "url": "https://omabrowser.org/oma/group/I3LHD8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F6PEI8-1", "protein_name": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "gene_name": "hhipl1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MWYFCDVFGRIWQPPFILFYLSAFWIAPAILHPQCLDFKPPFQPQQELQFCQMYKNFGCCDYARDQELMKKYYRVMDNFDYYGYSNCASYVQDLLCQECSPYAAHLFDAEDPSTPLRTIPGLCPDYCAQFHSKCRSFLTLLSDDPRLAELEHDQRKLCQYLELDDPDYCYPHLLSNEHLNKNLGRTAADSEGCLQLCLEEVANGLRNPLAMVHANDGTHRFFVAEQVGLVWVYLPDQSKLEKPFLNITKAVLTSPWEGDERGFLGLTFHPRFKYNGKLYVYYSVEVGFDERIRISEFRISSTDMNVVDHTSERIILEIDEPASNHNGGQLLFADDGYLYIFTGDGGMAGDPFGKFGNAQNKSALLGKVLRIDVDDNERGPLYRIPADNPFVHEPKARPEVYAYGVRNMWRCSVDRGDPITKEGRGRIFCGDVGQNKYEEVDIVEKGRNYGWRAKEGFSCYDKKLCANSSLDDVLPIYAYPHKMGKSVTGGYVYRGCENPNLNGLYIFGDFMSGRLMSLKENRQTGNWEYNEICMGIGLTCSFPGLINNYYPYIISFAEDEAGELYFMSTEIPSATSPTGVVYKIVDPSRRAPPGKCHYEPHSVRVKSNIIPFEPKETLIGVHIPTKQPKLSNTEEPPLVTTKDWLRELLDNFREEDGQITTTPFTPTTPKPVRTSRQRKGRRRKGKHKNGAVRLVGDEEGQRDRGRVEVYANGEWGTVCDDLWNTKNAVVVCRQLGFLHALKAAKHAEFGEGTGLKIILDDVQCEGTEETLLDCQHAGIGTHNCAHYEDAGVVCGNSVASLQ", "length": 802 }, "evidence": [ { "id": "I3LHD8", "url": "https://omabrowser.org/oma/group/I3LHD8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q14DK5-1", "protein_name": "HHIP-like protein 1", "gene_name": "Hhipl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGRRAVARIGPGALLVLRALLAAAHPQCLDFRPPFRPPQPLSFCAQYSAFGCCTAEQDAALARRFRVLETRMDAGVWATCAGYALDLLCQECSPYAAHLYDAEDPATPLRTVPGLCEDYCLDMWQTCRGLFRLLSPDRELWALESNRAKLCRYLSLDDTDYCFPSLLVNENLNSNLGRVVADAKGCLQLCLEEVANGLRNPVAMVHAGDGSHRFFVAEQVGLVWTYLPDRSRLEKPFLNVSQAVLTSPWEGDERGFLGLAFHPRFPHPSKLYVYYSVGVGFREWIRISEFRVSEGDENTVDHGSERIILEIEEPASNHNGGQLLFGDDGFLYIFTGDGGMAGDPFGKFGNAQNKSALLGKVLRIDVDRKERGLHYGIPPDNPFVDDPGARPEVYALGVRNMWRCSFDRGDPMSGTGRGRLFCGDVGQNKYEEVDLVERGRNYGWRAREGFECYDRKLCANTSLDDVLPIFAYPHKLGKSVTGGYVYRGCEYPNLNGLYIFGDFMSGRLMSLRENPETGQWKYSEVCMGRGQTCAFPGLINNYYPYIISFAEDEAGELYFMSTGVPSATAAHGVIYKVIDPSRRAPPGKCKIRPAQVKVRSHLIPFVPKEKFIRTPESTPRPTARAPTKAPRRRRPTAAPPAPTPRPTKPARPTRRPGARKGGGRRRGRPSTAVPEPENGSVRLVRPAGLSPGRGRVEVFIGGRWGTVCDDAWDTKAAAVVCRQLGFAHAVRAAKRAEFGEGRALRILLDDVRCAGSERNLLECAHAGVGTHNCKHDEDAGVECSHQDPNL", "length": 791 }, "evidence": [ { "id": "I3LHD8", "url": "https://omabrowser.org/oma/group/I3LHD8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96JK4-1", "protein_name": "HHIP-like protein 1", "gene_name": "HHIPL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRFWALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWHKCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKGCLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVLTSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRSSEWIRISEFRVSEDDENAVDHSSERIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRIDVDRKERGLPYGIPPDNPFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDVGQNKFEEVDVVERGGNYGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYVYRGCEYPNLNGLYIFGDFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPYIISFGEDEAGELYFMSTGEPSATAPRGVVYKIIDASRRAPPGKCQIQPAQVKIRSRLIPFVPKEKFIPKTRSTPRPTARAPTRAPRRGRPTAAPPAPTPRPARPTQQPGSRRGGGRRRGRLNSASRAFRDGEVRLVRPAGLSSGSGRVEVFVGGRWGTVCDDSWNISGAAVVCRQLGFAYAVRAVKRAEFGQGGSLPILLDDVRCAGWERNLLECQHNGVGTHNCEHDEDAGVVCSHQNPDL", "length": 782 }, "evidence": [ { "id": "I3LHD8", "url": "https://omabrowser.org/oma/group/I3LHD8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9SSG3-1", "protein_name": "HIPL1 protein", "gene_name": "HIPL1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKLHQFLVFLFLFLSCFALSSWALPLCSDSRAPSEVNSTLSFCPYKGKTCCNTMKDTSLMKQFQAMNISDKGCASVVKSILCANCDPFSSDLFRDNSDQQSVPILCNSTSSANSTENFCSETWETCQNVSISGSLFAASLQGRAGAPSNKNASKLADLWQSKTDFCSAFGGASSNETVCFSGEPVALNDNDTTPDKPPSGICLEKIGNGSYLNMVPHPDGSNRAFFSTQPGIVFLAGIPDQDSGGVLDVDPSSPFVDMTDEIHFDTEFGMMGMAFHPKFAQNGRFFASFNCDKSKWPGCTGRCSCNSDVNCDPSKLTPDSGSQPCQYQTVIAEYTANSTSSDPSKAKNAKPTEVRRIFTMGLPFTSHHAGQILFGPDGYLYFMMGDGGGGADPYNFAQNKKSLLGKIMRLDVDNIPSASEISKMGLWGNYSIPKDNPFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDTYEEVDLISKGGNYGWRVYEGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSASITGGYFYRSETDPCIAGRYVYADLYGNGVWAGIETPANSGSFVTKRTTFSCASDSPMKCSDSPGTSGLSLGYVFSFGEDNNKDIYLLTSNGVYRVVRPSRCNLTCSKENSTARRNPGTSSSPSSSSSSCYKHINGFHGSLVVLFVSLSLILLGLLN", "length": 695 }, "evidence": [ { "id": "I3LHD8", "url": "https://omabrowser.org/oma/group/I3LHD8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LHD8", "url": "https://www.uniprot.org/uniprotkb/I3LHD8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LHD8", "url": "https://www.uniprot.org/uniprotkb/I3LHD8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 240, "end_pos": 242, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" }, { "start_pos": 461, "end_pos": 463, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LHD8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 789, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LHD8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LHD8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LHD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHD8" }, { "id": "PS50287", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50287" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SRCR", "eco_id": "ECO_0000259", "start_pos": 680, "end_pos": 783, "start_aa": "Val", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 240, "end_pos": 242 }, { "start_pos": 354, "end_pos": 356 }, { "start_pos": 461, "end_pos": 463 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LI25-1", "uniprot_ac": "I3LI25", "uniprot_id": "I3LI25_PIG", "mass": { "chemical_mass": 151201.0, "monoisotopic_mass": 151201.0 }, "refseq": {}, "gene_names": [ { "name": "PHLDB1", "type": "recommended", "evidence": [ { "id": "I3LI25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI25" } ] } ], "protein_names": [ { "name": "Pleckstrin homology-like domain family B member 1", "type": "recommended", "evidence": [ { "id": "I3LI25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI25/entry#names_and_taxonomy" } ] }, { "name": "Protein LL5-alpha", "type": "synonym", "evidence": [ { "id": "I3LI25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI25/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LI25", "url": "https://www.uniprot.org/uniprotkb/I3LI25" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PHLDB1", "url": "https://www.uniprot.org/uniprotkb/I3LI25", "locus": { "chromosome": "9", "start_pos": 45949415, "end_pos": 45902155, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024578", "url": "https://www.ensembl.org/id/ENSSSCG00000024578" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024578", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024578", "database": "Bgee", "categories": [ "Gene 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"https://www.ebi.ac.uk/interpro/entry/IPR037810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052212", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052212", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12156", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12156", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12156:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12156:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00498", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00498", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2RAE0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAE0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAE0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAE0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ96", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ96", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ96-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ96-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI25", "url": "https://www.uniprot.org/uniprotkb/I3LI25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI25-1", "url": "https://www.uniprot.org/uniprotkb/I3LI25-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1345, "header": "tr|A0A5G2RAE0-1|I3LI25_PIG Computationally mapped isoform of Pleckstrin homology-like domain family B member 1 OS=Sus scrofa OX=9823 GN=PHLDB1 PE=4 SV=2 CANONICAL=I3LI25-1" }, "locus": { "chromosome": "9", "start_pos": 45948128, "end_pos": 45904569, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082627.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082627.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073289.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073289.2" } ] } }, { "isoform_ac": "A0A8W4FJ96-1", "url": "https://www.uniprot.org/uniprotkb/I3LI25/entry#A0A8W4FJ96-1", "sequence": { "sequence": "MDTLNRSQVGPGCKTQATVQKGPLDLIETGKGLKVQTDKPHLVSLGSGRLSTAITLLPLEEGRTVIGSAARDISLQGPGLAPEHCYIENLRGTLTLYPCGNACTIDGLPVRQPTRLTQGCMLCLGQSTFLRFNHPAEAKWMKSMIPAGGRAPGPPFGPGPGESESLVNGNHTPQPATRGPSACGSHSSLVSSIEKDLQEIMDSLVLEEPGAAGKKPAATSPLSPMANGGRYLLSPPTSPGHVCGLQL", "length": 247, "header": "tr|A0A8W4FJ96-1|A0A8W4FJ96_PIG Computationally mapped isoform of Pleckstrin homology like domain family B member 1 OS=Sus scrofa OX=9823 GN=PHLDB1 PE=4 SV=1 CANONICAL=I3LI25-1" }, "locus": { "chromosome": "9", "start_pos": 45920504, "end_pos": 45908231, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100861.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100861.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079300.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079300.1" } ] } }, { "isoform_ac": "I3LI25-1", "url": "https://www.uniprot.org/uniprotkb/I3LI25/entry#I3LI25-1", "sequence": { "sequence": "MDTLNRSQVGPGCKTQATVQKGPLDLIETGKGLKVQTDKPHLVSLGSGRLSTAITLLPLEEGRTVIGSAARDISLQGPGLAPEHCYIENLRGTLTLYPCGNACTIDGLPVRQPTRLTQGCMLCLGQSTFLRFNHPAEAKWMKSMIPAGGRAPGPPFGPGPGESESLVNGNHTPQPATRGPSACGSHSSLVSSIEKDLQEIMDSLVLEEPGAAGKKPAATSPLSPMANGGRYLLSPPTSPGAMSVGSSYENTSPAFSPLSSPASSGSCASHSPSGQEPAPSMPPLVPARSSSYHLALQPPQSRPSGARPSESPRLGRKGGHERPPSPGLRGLLTDSPAATVLAEARRATESPRPGGQLPLVAISLSDYPASGARSQPTSIPGSPKFQPPVPAPRNKIGTLQDRPPSPFREPPGTERVLTTSPSRQLVGRTFSDGSAARTLQPPESPRLGRRGLDSMRELPPLSPSLSRRALSPMPTRTTPDPKVTREVADSPRPRRWAAHGASPEDFSLTLGARGRRTRSPSPTLGESLAPRKGSFSGRLSPAYSLGSLTGASPRQSPRAQRKLSSGDLRVPVTRERKNSITEISDNEDDLLEYHRRQRQERLREQEMERLERQRLETILNLCAEYSRADGGPEAGELPSIGEAAAALALAGRRPSRGLGAVTGASGRSSEEPGGATQRLWESVERSDEENLKEECSSTESTQQEHEDAPSTKLQGEVLALEEERAQVLGRVEQLKVRVKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKLVTLETGIQKERDKEAALETETKLFEDLEFQQLERESRVEEEREVAGQGLLRSKAELLRNIAKRKERLAVLDSQAGQIRSQAVQESERLARDKNASLQLLQKEKEKLAMLERRYHSLTGGRPFPKTTSTLKEMEKLLLPAVDLEQWYQELMAGLGTGPAAASPRSSPPPLPAKASRQLQVYRSRMDGEATSPLPRTRSGPLPSSSGSSSSSSQLSVATLGRSPSPKSVLLSHNGTSSLPRNLAATLQDIETKRQLALQQKGQQVIEEQRRRLAELKQKAAAEAQCQWDALHGAAPFPTGPSGFPPLAHHSILHHLPAARERGEEGEHAYDTLSLESSDSMETSISTGGNSACSPDNMSSTSGLDVGKIEEMEKMLKEAHAEKSRLMESREREMELRRQALEEERRRREQVERRLQSESARRQQLVEKEVKMREKQFSQARPLTRYLPIRKEDFDLKTHIESSGHGVDTCLHVVLSSKVCRGYLVKMGGKIKSWKKRWFVFDRLKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKKRFFSFTLVTESPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN", "length": 1380, "header": "tr|I3LI25-1|I3LI25_PIG Isoform 1 of Pleckstrin homology-like domain family B member 1 OS=Sus scrofa OX=9823 GN=PHLDB1 PE=4 SV=4 CANONICAL=I3LI25-1" }, "locus": { "chromosome": "9", "start_pos": 45948128, "end_pos": 45908231, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026664.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026664.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023724.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023724.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RAE0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAE0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "basal cortex", "id": "GO:0045180", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045180", "evidence": [ { "database": "UniProtKB", "id": "I3LI25", "url": "https://www.uniprot.org/uniprotkb/I3LI25" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "basement membrane organization", "id": "GO:0071711", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071711", "evidence": [ { "database": "UniProtKB", "id": "I3LI25", "url": "https://www.uniprot.org/uniprotkb/I3LI25" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1016, "end_pos": 1018, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1139, "end_pos": 1141, "annotation": "n_glycosylation_sequon" }, { "start_pos": 170, "end_pos": 172, "annotation": "n_glycosylation_sequon" }, { "start_pos": 250, "end_pos": 252, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" }, { "start_pos": 877, "end_pos": 879, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LI25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI25" }, { "id": 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"url": "https://www.uniprot.org/uniprotkb/A0A5G2RB34-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIH2-1", "url": "https://www.uniprot.org/uniprotkb/I3LIH2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKPSGEDRAARAGGPWEECFEAAVQLALRAGQIIRKALSEEKRVSTKTSAVDLVTETDQAVEALILSELQERFPSHRFIAEEAAAAGAKCVLTPSPTWIVDPIDGTCNFVHRFPTVAVSIGFAVNQELEFGVIYHCTEERLYTGQRGRGAFCNGQQLQFRETDLSKALVLTEIGPRRDPATLKLFLSNMERLLRTGAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVMDTSGGPLDLMACRVVAAGTREMATLVAQALQTINYGRDDER", "length": 287, "header": "tr|I3LIH2-1|I3LIH2_PIG Isoform 1 of Inositol-1-monophosphatase OS=Sus scrofa OX=9823 GN=IMPA2 PE=3 SV=3 CANONICAL=I3LIH2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RB34-1", "url": "https://www.uniprot.org/uniprotkb/I3LIH2/entry#A0A5G2RB34-1", "sequence": { "sequence": "MKPSGEDRAARAGGPWEECFEAAVQLALRAGQIIRKALSEEKRVSTKTSAVDLVTETDQAVEALILSELQERFPSHRFIAEEAAAAGAKCVLTPSPTWIVDPIDGTCNFVHRPLQGPGLDGNRSQARPRDSEAVPEQHGEAASHWGARRPSHRQLHLGALPPGLRRCRCLLPVWPALLGPGRCHCDHPRSRRHCDGHVRRPPRPHGLQSGCCGYPGDGNPRCSGPTND", "length": 228, "header": "tr|A0A5G2RB34-1|I3LIH2_PIG Computationally mapped isoform of Inositol-1-monophosphatase OS=Sus scrofa OX=9823 GN=IMPA2 PE=3 SV=1 CANONICAL=I3LIH2-1" }, "locus": { "chromosome": "6", "start_pos": 97309623, "end_pos": 97280322, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089709.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089709.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074545.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074545.1" } ] } }, { "isoform_ac": "I3LIH2-1", "url": "https://www.uniprot.org/uniprotkb/I3LIH2/entry#I3LIH2-1", "sequence": { "sequence": "MKPSGEDRAARAGGPWEECFEAAVQLALRAGQIIRKALSEEKRVSTKTSAVDLVTETDQAVEALILSELQERFPSHRFIAEEAAAAGAKCVLTPSPTWIVDPIDGTCNFVHRFPTVAVSIGFAVNQELEFGVIYHCTEERLYTGQRGRGAFCNGQQLQFRETDLSKALVLTEIGPRRDPATLKLFLSNMERLLRTGAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVMDTSGGPLDLMACRVVAAGTREMATLVAQALQTINYGRDDER", "length": 287, "header": "tr|I3LIH2-1|I3LIH2_PIG Isoform 1 of Inositol-1-monophosphatase OS=Sus scrofa OX=9823 GN=IMPA2 PE=3 SV=3 CANONICAL=I3LIH2-1" }, "locus": { "chromosome": "6", "start_pos": 97309623, "end_pos": 97280297, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022557.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022557.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023877.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023877.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RB34", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB34" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1855183", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1855183", "resource": "Reactome", "description": "Synthesis of IP2, IP, and Ins in the cytosol" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "inositol monophosphate 1-phosphatase activity", "id": "GO:0008934", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008934", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "glucose-6-phosphatase activity", "id": "GO:0004346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004346", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "fructose-1-phosphatase activity", "id": "GO:0103026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0103026", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "inositol metabolic process", "id": "GO:0006020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006020", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "response to lithium ion", "id": "GO:0010226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010226", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "inositol biosynthetic process", "id": "GO:0006021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006021", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" }, { "name": "phosphatidylinositol phosphate biosynthetic process", "id": "GO:0046854", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046854", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LIH2", "url": "https://www.uniprot.org/uniprotkb/I3LIH2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": 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"35603", "name": "", "equation": "beta-D-fructose 1-phosphate + H2O = D-fructose + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "35603", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/35603" } ] }, { "id": "82131", "name": "", "equation": "scyllo-inositol 1-phosphate + H2O = scyllo-inositol + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "82131", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/82131" } ] }, { "id": "R-SSC-1855154", "name": "I1P is dephosphorylated to Ins by IMPA1/2 in the cytosol", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-870330" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1855154", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1855154" } ] }, { "id": "R-SSC-1855210", "name": "I3P is dephosphorylated to Ins by IMPA1/2 in the cytosol", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-1629731" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1855210", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1855210" } ] }, { "id": "R-SSC-1855211", "name": "I4P is dephosphorylated to Ins by IMPA1/2 in the cytosol", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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] }, { "uniprot_canonical_ac": "I3LC84-1", "uniprot_ac": "I3LC84", "uniprot_id": "I3LC84_PIG", "mass": { "chemical_mass": 36261.0, "monoisotopic_mass": 36261.0 }, "refseq": {}, "gene_names": [ { "name": "SULT1C4", "type": "recommended", "evidence": [ { "id": "I3LC84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ] } ], "protein_names": [ { "name": "Sulfotransferase", "type": "recommended", "evidence": [ { "id": "I3LC84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC84/entry#names_and_taxonomy" } ] }, { "name": "2.8.2.-", "type": "synonym", "evidence": [ { "id": "I3LC84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC84/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623441", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623441", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EQANTMP", "url": "https://omabrowser.org/oma/group/EQANTMP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LC84", "url": "https://www.orthodb.org/?gene=I3LC84", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11783", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11783", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00685", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00685", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-156584", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-156584", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9753281", "url": 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"MALSKMEGLEHDEGERLAVDYVEGILQPTPTCDTWVQIWNFQARPDDLLIATYPKAGTTWVQEIVDFIQSEGDADRCHRAPIHDRFPFIEWKIPFLESGLEQAEAMPSPRTLKTHLPIGLLPPSFLEKNCKIIYVARNPKDNMVSYYHFHRMNKALPAPGTWEEYFESFLAGKVCWGSWYDHVRGWWDAKDQHRILYLFYEDMKENPKREIQKLAEFIGKSLDDEILDKIIHHTSFDVMKQNPMANYSSVPAKFMNHSISPFMRKGTVGDWKNHFTVAQNERFDEDYGKRMADTTLTFHFQLKKSQIQPV", "length": 310, "header": "tr|I3LC84-1|I3LC84_PIG Isoform 1 of Sulfotransferase OS=Sus scrofa OX=9823 GN=SULT1C4 PE=1 SV=1 CANONICAL=I3LC84-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RL24-1", "url": "https://www.uniprot.org/uniprotkb/I3LC84/entry#A0A5G2RL24-1", "sequence": { "sequence": "MALSKMEGLEHDEGERLAVDYVEGILQPTPTCDTWVQIWNFQARPDDLLIATYPKAGTTWVQEIVDFIQSEGDADRCHRAPIHDRFPFIEWKIPFLESVCWGSWYDHVRGWWDAKDQHRILYLFYEDMKENPKREIQKLAEFIGKSLDDEILDKIIHHTSFDVMKQNPMANYSSVPAKFMNHSISPFMRKGTVGDWKNHFTVAQNERFDEDYGKRMADTTLTFHFQLKKSQIQPV", "length": 235, "header": "tr|A0A5G2RL24-1|I3LC84_PIG Computationally mapped isoform of Sulfotransferase OS=Sus scrofa OX=9823 GN=SULT1C4 PE=1 SV=1 CANONICAL=I3LC84-1" }, "locus": { "chromosome": "3", "start_pos": 47776680, "end_pos": 47766449, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081946.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081946.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072968.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072968.1" } ] } }, { "isoform_ac": "I3LC84-1", "url": "https://www.uniprot.org/uniprotkb/I3LC84/entry#I3LC84-1", "sequence": { "sequence": "MALSKMEGLEHDEGERLAVDYVEGILQPTPTCDTWVQIWNFQARPDDLLIATYPKAGTTWVQEIVDFIQSEGDADRCHRAPIHDRFPFIEWKIPFLESGLEQAEAMPSPRTLKTHLPIGLLPPSFLEKNCKIIYVARNPKDNMVSYYHFHRMNKALPAPGTWEEYFESFLAGKVCWGSWYDHVRGWWDAKDQHRILYLFYEDMKENPKREIQKLAEFIGKSLDDEILDKIIHHTSFDVMKQNPMANYSSVPAKFMNHSISPFMRKGTVGDWKNHFTVAQNERFDEDYGKRMADTTLTFHFQLKKSQIQPV", "length": 310, "header": "tr|I3LC84-1|I3LC84_PIG Isoform 1 of Sulfotransferase OS=Sus scrofa OX=9823 GN=SULT1C4 PE=1 SV=1 CANONICAL=I3LC84-1" }, "locus": { "chromosome": "3", "start_pos": 47776680, "end_pos": 47766449, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027951.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027951.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021658.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021658.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RL24", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RL24" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623441", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623441", "resource": "KEGG Pathway" }, { "id": "R-SSC-156584", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-156584", "resource": "Reactome", "description": "Cytosolic sulfonation of small molecules" }, { "id": "R-SSC-9753281", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9753281", "resource": "Reactome", "description": "Paracetamol ADME" } ], "orthologs": [ { "uniprot_canonical_ac": "Q8RV79-1", "protein_name": "Cytosolic sulfotransferase 11", "gene_name": "SOT11", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFTFFTILSLCFKSWEQIITMEASKEAHHLPNYMKDDNVSQETKNLITSLPSDKDFMGYGLYNYKGCWYYPNTLQAVLDVQKHFKPRDTDIILASLPKGGTTWLKSLIFAVVHREKYRGTPQTHPLLLQNPHDLVPFLEVELYANSQIPDLAKYSSPMIFSTHMHLQALREATTKACKTVYVCRGIKDTFVSGWHYRNMLHRTKMDQATFELMFDAYCRGVLLYGPYWEHVLSYWKGSLEAKENVLFMKYEEIIEEPRVQVKRLAEFLECPFTKEEEESGSVEEILKLCSLRNLSNLEVNKNGTTRIGVDSQVFFRKGEVGDWKNHLTPQMAKTFDEIIDYRLGDSGLIFQ", "length": 351 }, "evidence": [ { "id": "I3LC84", "url": "https://omabrowser.org/oma/group/I3LC84/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "sulfotransferase activity", "id": "GO:0008146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008146", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" }, { "name": "aryl sulfotransferase activity", "id": "GO:0004062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004062", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "sulfation", "id": "GO:0051923", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051923", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" }, { "name": "ethanol catabolic process", "id": "GO:0006068", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006068", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" }, { "name": "xenobiotic metabolic process", "id": "GO:0006805", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006805", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" }, { "name": "3'-phosphoadenosine 5'-phosphosulfate metabolic process", "id": "GO:0050427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050427", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" }, { "name": "doxorubicin metabolic process", "id": "GO:0044598", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044598", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" }, { "name": "flavonoid metabolic process", "id": "GO:0009812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009812", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LC84", "url": "https://www.uniprot.org/uniprotkb/I3LC84" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 246, "end_pos": 248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 256, "end_pos": 258, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "70607", "name": "", "equation": "4-ethylphenol + 3'-phosphoadenylyl sulfate = 4-ethylphenyl sulfate + adenosine 3',5'-bisphosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "70607", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/70607" } ] }, { "id": "R-SSC-176646", "name": "p-nitrophenol + PAPS => p-nitrophenol sulfate + PAP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-5695950" ], "output_participant_list": [ "R-ALL-176600" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-176646", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176646" } ] }, { "id": "R-SSC-176669", "name": "N-hydroxy-2-acetylaminofluorene + PAPS => 2-acetylaminofluorene-N-sulfate + PAP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-176566" ], "output_participant_list": [ "R-ALL-176500" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-176669", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-176669" } ] }, { "id": "R-SSC-9753277", "name": "SULT dimers sulfate APAP to APAP-SO3", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [ "R-ALL-9753448" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9753277", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9753277" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-176500", "participant_name": "AAF-N-S [cytosol]", "crossref": [ { "id": "35424", "database": "ChEBI", "url": "" }, { "id": "ZINC000002018271", "database": "ZINC", "url": "" }, { "id": "11533684", "database": "PubChem Substance", "url": "" } ] }, { "participant_id": "R-ALL-176566", "participant_name": "N-hydroxy-2-acetylaminofluorene [cytosol]", "crossref": [ { "id": "17931", "database": "ChEBI", "url": "" }, { "id": "8145202", "database": "PubChem Substance", "url": "" }, { "id": "ZINC000005196784", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-176600", "participant_name": "p-nitrophenol sulfate [cytosol]", "crossref": [ { "id": "ZINC000001633996", "database": "ZINC", "url": "" }, { "id": "35422", "database": "ChEBI", "url": "" }, { "id": "11533685", "database": "PubChem Substance", "url": "" }, { "id": "HMDB0006492", "database": "HMDB Metabolite", "url": "" } ] }, { "participant_id": "R-ALL-5695950", "participant_name": "PNP [cytosol]", "crossref": [ { "id": "16836", "database": "ChEBI", "url": "" }, { "id": "8143627", "database": "PubChem Substance", "url": "" }, { "id": "C00870", "database": "COMPOUND", "url": "" }, { "id": "ZINC000034828682", "database": "ZINC", "url": "" }, { "id": "HMDB0001232", "database": "HMDB Metabolite", "url": "" } ] }, { "participant_id": "R-ALL-9753448", "participant_name": "APAP-SO3 [cytosol]", "crossref": [ { "id": "8147600", "database": "PubChem Substance", "url": "" }, { "id": "HMDB0059911", "database": "HMDB Metabolite", "url": "" }, { "id": "32635", "database": "ChEBI", "url": "" }, { "id": "ZINC000002382375", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LC84", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC84" }, { "id": "PF00685", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00685" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sulfotransferase", "eco_id": "ECO_0000259", "start_pos": 45, "end_pos": 294, "start_aa": "Pro", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 246, "end_pos": 248 }, { "start_pos": 256, "end_pos": 258 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LKM6-1", "uniprot_ac": "I3LKM6", "uniprot_id": "I3LKM6_PIG", "mass": { "chemical_mass": 131087.0, "monoisotopic_mass": 131087.0 }, "refseq": {}, "gene_names": [ { "name": "TDRD1", "type": "recommended", "evidence": [ { "id": "I3LKM6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ] } ], "protein_names": [ { "name": "Tudor domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "I3LKM6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKM6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a central role during spermatogenesis by participating in the repression transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Required for the localization of Piwi proteins to the meiotic nuage. Involved in the piRNA metabolic process by ensuring the entry of correct transcripts into the normal piRNA pool and limiting the entry of cellular transcripts into the piRNA pathway. May act by allowing the recruitment of piRNA biogenesis or loading factors that ensure the correct entry of transcripts and piRNAs into Piwi proteins.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RLX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RLX5#function" }, { "database": "UniProtKB", "id": "ARBA00060128", "url": "https://www.uniprot.org/uniprotkb/ARBA00060128#function" }, { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6#function" }, { "database": "UniProtKB", "id": "A0A8W4FDU0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDU0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TDRD1", "url": "https://www.uniprot.org/uniprotkb/I3LKM6", "locus": { "chromosome": "14", "start_pos": 124573244, "end_pos": 124529586, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021075", "url": "https://www.ensembl.org/id/ENSSSCG00000021075" } ] } } ], "crossref": [ { "id": "I3LKM6", "url": "https://alphafold.ebi.ac.uk/entry/I3LKM6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021075", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021075", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20408", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20408", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd20409", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20409", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd20410", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20410", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002893", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002893", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002999", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002999", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035437", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035437", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047376", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047376", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047377", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047377", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047378", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047378", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050621", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050621", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR22948", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22948", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22948:SF29", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22948:SF29", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00567", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00567", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01753", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01753", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2RLX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RLX5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RLX5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RLX5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDU0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDU0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDU0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKM6-1", "url": "https://www.uniprot.org/uniprotkb/I3LKM6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "VNVALPLNRMSRNNLEASACKMTEPFNFEKNDSTLPPHDALRSPGGHPNHPNFRLKSPETGNKKNNFLLCEQTKQYLVSQEDSSVSSNPNGVSGEAAGSRGDRKMLPTGNPVSPLNIGNNSPPKEINSKPSNNVPPAKSKKGDKLVENSLSINNPALFSSLGPPLRSTTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVCKPVQQNFRKLEDNKSPFETKNLEVKNESDYPLGVTKEIAVCAGKIMFSDLRSLQLRKTMEIKGTVTEFKHPSDFYVQLYSSEVSEYMNQLSSSLKETYANKAHEEDYIPVKGEVCVAKYTVDQTWNRVLIQDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAIKCFVASVIPAEGNWSSDCVRSIKSLLLEQCCSVKIVDILEEEVVTFAVDVMLTSSGKLLDHVLIEMGYGLKPKGQNSKKQSADSGDLDDVGKMTAENKIVVDRSDLIPKVLTLNVGDEFRGVVAHIQTPEDFFCQQLQSGHKLAELQASLSQYCSQVPPRSDFYPAIGDICCAQFSEDAQWYRASVLAYASEDSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLIDAGFAEGDKGVVPDKPSDLKEASVPLGLEAKVSRLEWTWVELAVDQTVDVVVCMIYSPGEFYCHVLKEDALKKLNDLNKSLAEYCQQKLPNDFKAEIGQPCCAFFVGDGNWYRALVKEISPHGNVKVQFVDYGNIEEVIADELQMIPSKFLKLPFQGLHCWLVDIQPRNKHWTKDAIARFQTCVSGKKLQARVVEISENGVGIELTDLSSSYPRIISDILIDEHLVLKVSSPCKVLVKNRPVNKHDLQTDASGLQAVETVELPVNKTVHASVLEIISPNLFYALQMKYQVRNQERLCALTAELVEYCNSQKSPLAYRPKTGDACCAKYTDDDLWYRAVVLGTSDADVRVLYADYGNIETLPPCRVQPISANHLEPPFQIIKCSLEGIIELNGSCSQLLLELLKNFMLNQNVMLSVKGVTKNVHAVSVEKCSENGTVSIADKLVTYGLAKHITSKKQSASQKEKTNRMNCCCTALQKQVEKHEQILLFLLNNPTNQNKFIEMKKLLKS", "length": 1177, "header": "tr|I3LKM6-1|I3LKM6_PIG Isoform 1 of Tudor domain-containing protein 1 OS=Sus scrofa OX=9823 GN=TDRD1 PE=3 SV=3 CANONICAL=I3LKM6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RLX5-1", "url": "https://www.uniprot.org/uniprotkb/I3LKM6/entry#A0A5G2RLX5-1", "sequence": { "sequence": "VNVALPLNRMSRNNLEASACKMTEPFNFEKNDSTLPPHDALRSPGGHPNHPNFRLKSPETGNKKNNFLLCEQTKQYLVSQEDSSVSSNPNGVSGEAAGSRGDRKMLPTGNPVSPLNIGNNSPPKEINSKPSNNVPPAKSKKGDKLVENSLSINNPALFSSLGPPLRSTTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVCKPVQQNFRKLEDNKSPFETKNLEVKNESDYPLGVTKEIAVCAGKIMFSDLRSLQLRKTMEIKGTVTEFKHPSDFYVQLYSSEVSEYMNQLSSSLKETYANKAHEEDYIPVKGEVCVAKYTVDQTWNRVLIQDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAIKCFVASVIPAEGNWSSDCVRSIKSLLLEQCCSVKIVDILEEEVVTFAVDVMLTSSGKLLDHVLIEMGYGLKPKGQNSKKQSADSGDLDDVGKMTAENKIVVDRSDLIPKVLTLNVGDEFRGVVAHIQTPEDFFCQQLQSGHKLAELQASLSQYCSQVPPRSDFYPAIGDICCAQFSEDAQWYRASVLAYASEDSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLIDAGFAEGDKGVVPDKPSDLKEASVPLGLEAKVSRLEWTWVELAVDQTVDVVVCMIYSPGEFYCHVLKEDALKKLNDLNKSLAEYCQQKLPNDFKAEIGQPCCAFFVGDGNWYRALVKEISPHGNVKVQFVDYGNIEEVIADELQMIPSKFLKLPFQGLHCWLVDIQPRNKHWTKDAIARFQTCVSGKKLQARVVEISENGVGIELTDLSSSYPRIISDILIDEHLVLKVSSPCKVLVKNRPVNKHDLQTDASGLQAVETVELPVNKTVHASVLEIISPNLFYALQMKYQVRNQERLCALTAELVEYCNSQKSPLAYRPKTGDACCAKYTDDDLWYRAVVLGTSDADVRVLYADYGNIETLPPCRVQPISANHLEPPFQIIKCSLEEKTNRMNCCCTALQKQVEKHEQILLFLLNNPTNQNKFIEMKKLLKS", "length": 1101, "header": "tr|A0A5G2RLX5-1|I3LKM6_PIG Computationally mapped isoform of Tudor domain-containing protein 1 OS=Sus scrofa OX=9823 GN=TDRD1 PE=3 SV=1 CANONICAL=I3LKM6-1" }, "locus": { "chromosome": "14", "start_pos": 124572253, "end_pos": 124534573, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071262.1", "url": "https://www.ensembl.org/id/ENSSSCT00000071262.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073439.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073439.1" } ] } }, { "isoform_ac": "A0A8W4FDU0-1", "url": "https://www.uniprot.org/uniprotkb/I3LKM6/entry#A0A8W4FDU0-1", "sequence": { "sequence": "MSRNNLEASACKMTEPFNFEKNDSTLPPHDALRSPGGHPNHPNFRLKSPETGNKKNNFLLCEQTKQYLVSQEDSSVSSNPNGVSGEAAGSRGDRKMLPTGNPVSPLNIGNNSPPKEINSKPSNNVPPAKSKKGDKLVENSLSINNPALFSSLGPPLRSTTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVCKPVQQNFRKLEDNKSPFETKNLEVKNESDYPLGVTKEIAVCAGKIMFSDLRSLQLRKTMEIKGTVTEFKHPSDFYVQLYSSEVSEYMNQLSSSLKETYANKAHEEDYIPVKGEVCVAKYTVDQTWNRVLIQDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAIKCFVASVIPAEGNWSSDCVRSIKSLLLEQCCSVKIVDILEEEVVTFAVDVMLTSSGKLLDHVLIEMGYGLKPKGQNSKKQSADSGDLDDVGKMTAENKIVVDRSDLIPKVLTLNVGDEFRGVVAHIQTPEDFFCQQLQSGHKLAELQASLSQYCSQVPPRSDFYPAIGDICCAQFSEDAQWYRASVLAYASEDSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLIDAGFAEGDKGVVPDKPSDLKEASGVPLGLEAKVSRLEWTWVELAVDQTVDVVVCMIYSPGEFYCHVLKEDALKKLNDLNKSLAEYCQQKLPNDFKAEIGQPCCAFFVGDGNWYRALVKEISPHGNVKVQFVDYGNIEEVIADELQMIPSKFLKLPFQGLHCWLVDIQPRNKHWTKDAIARFQTCVSGKKLQARVVEISENGVGIELTDLSSSYPRIISDILIDEHLVLKVSSPCKVLVKNRPVNKHDLQTDASGLQEICLTVELPVNKTVHASVLEIISPNLFYALQMKYQERLCALTAELVEYCNSQKSPLAYRPKTGDACCAKYTDDDLWYRAVVLGTSDADVRVLYADYGNIETLPPCRVQPISANHLEPPFQIIKCSLEGIIELNGSCSQLLLELLKNFMLNQNVMLSVKGVTKNVHAVSVEKCSENGTVSIADKLVTYGLAKHITSKKQSASQKEKTNRMNCCCTALQKQVEKHEQILLFLLNNPTNQNKFIEMKKLLKS", "length": 1166, "header": "tr|A0A8W4FDU0-1|I3LKM6_PIG Computationally mapped isoform of Tudor domain-containing protein 1 OS=Sus scrofa OX=9823 GN=TDRD1 PE=3 SV=1 CANONICAL=I3LKM6-1" }, "locus": { "chromosome": "14", "start_pos": 124572253, "end_pos": 124534600, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105732.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105732.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076475.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076475.1" } ] } }, { "isoform_ac": "I3LKM6-1", "url": "https://www.uniprot.org/uniprotkb/I3LKM6/entry#I3LKM6-1", "sequence": { "sequence": "VNVALPLNRMSRNNLEASACKMTEPFNFEKNDSTLPPHDALRSPGGHPNHPNFRLKSPETGNKKNNFLLCEQTKQYLVSQEDSSVSSNPNGVSGEAAGSRGDRKMLPTGNPVSPLNIGNNSPPKEINSKPSNNVPPAKSKKGDKLVENSLSINNPALFSSLGPPLRSTTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVCKPVQQNFRKLEDNKSPFETKNLEVKNESDYPLGVTKEIAVCAGKIMFSDLRSLQLRKTMEIKGTVTEFKHPSDFYVQLYSSEVSEYMNQLSSSLKETYANKAHEEDYIPVKGEVCVAKYTVDQTWNRVLIQDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAIKCFVASVIPAEGNWSSDCVRSIKSLLLEQCCSVKIVDILEEEVVTFAVDVMLTSSGKLLDHVLIEMGYGLKPKGQNSKKQSADSGDLDDVGKMTAENKIVVDRSDLIPKVLTLNVGDEFRGVVAHIQTPEDFFCQQLQSGHKLAELQASLSQYCSQVPPRSDFYPAIGDICCAQFSEDAQWYRASVLAYASEDSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLIDAGFAEGDKGVVPDKPSDLKEASVPLGLEAKVSRLEWTWVELAVDQTVDVVVCMIYSPGEFYCHVLKEDALKKLNDLNKSLAEYCQQKLPNDFKAEIGQPCCAFFVGDGNWYRALVKEISPHGNVKVQFVDYGNIEEVIADELQMIPSKFLKLPFQGLHCWLVDIQPRNKHWTKDAIARFQTCVSGKKLQARVVEISENGVGIELTDLSSSYPRIISDILIDEHLVLKVSSPCKVLVKNRPVNKHDLQTDASGLQAVETVELPVNKTVHASVLEIISPNLFYALQMKYQVRNQERLCALTAELVEYCNSQKSPLAYRPKTGDACCAKYTDDDLWYRAVVLGTSDADVRVLYADYGNIETLPPCRVQPISANHLEPPFQIIKCSLEGIIELNGSCSQLLLELLKNFMLNQNVMLSVKGVTKNVHAVSVEKCSENGTVSIADKLVTYGLAKHITSKKQSASQKEKTNRMNCCCTALQKQVEKHEQILLFLLNNPTNQNKFIEMKKLLKS", "length": 1177, "header": "tr|I3LKM6-1|I3LKM6_PIG Isoform 1 of Tudor domain-containing protein 1 OS=Sus scrofa OX=9823 GN=TDRD1 PE=3 SV=3 CANONICAL=I3LKM6-1" }, "locus": { "chromosome": "14", "start_pos": 124572253, "end_pos": 124534573, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023111.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023111.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024641.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024641.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RLX5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RLX5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": 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}, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" }, { "name": "regulatory ncRNA-mediated gene silencing", "id": "GO:0031047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031047", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" }, { "name": "meiotic cell cycle", "id": "GO:0051321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051321", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" }, { "name": "P granule organization", "id": "GO:0030719", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030719", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" }, { "name": "piRNA processing", "id": "GO:0034587", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034587", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" }, { "name": "transposable element silencing by piRNA-mediated DNA methylation", "id": "GO:0141196", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0141196", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": "https://www.uniprot.org/uniprotkb/I3LKM6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LKM6", "url": 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] }, { "uniprot_canonical_ac": "I3LLI7-1", "uniprot_ac": "I3LLI7", "uniprot_id": "I3LLI7_PIG", "mass": { "chemical_mass": 69308.0, "monoisotopic_mass": 69308.0 }, "refseq": { "ac": "XP_005668692", "name": "dynein intermediate chain 2, axonemal isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005668692" }, "gene_names": [ { "name": "DNAI2", "type": "recommended", "evidence": [ { "id": "I3LLI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ] }, { "name": "DNAI2", "type": "synonym", "evidence": [ { "id": "XP_005668692", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005668692" } ] } ], "protein_names": [ { "name": "Dynein axonemal intermediate chain 2", "type": "recommended", "evidence": [ { "id": "I3LLI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLI7/entry#names_and_taxonomy" } ] }, { "name": "Axonemal dynein intermediate chain 2", "type": "synonym", "evidence": [ { "id": 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Required for structural and functional integrity of cilia. Part of the dynein complex of respiratory cilia.", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7#function" }, { "database": "UniProtKB", "id": "ARBA00094490", "url": "https://www.uniprot.org/uniprotkb/ARBA00094490#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DNAI2", "url": "https://www.uniprot.org/uniprotkb/I3LLI7", "locus": { "chromosome": "12", "start_pos": 6809335, "end_pos": 6832766, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024357", "url": "https://www.ensembl.org/id/ENSSSCG00000024357" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024357", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024357", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100624095", "url": "https://www.ncbi.nlm.nih.gov/gene/100624095", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050687", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050687", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624095", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624095", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WDFFYRQ", "url": "https://omabrowser.org/oma/group/WDFFYRQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LLI7", "url": "https://www.orthodb.org/?gene=I3LLI7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12442", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12442", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12442:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12442:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005668692", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005668692", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2RNR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RNR5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RNR5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RNR5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLI7-1", "url": "https://www.uniprot.org/uniprotkb/I3LLI7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEIVYVYVKRRSEFGKQCNFSDRQAELNIDIQPNPELAQQFVERNPVDKGIQCSTSMSEHEANTERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYINAITQLGSIMEHCIKQNNAIDIYQEYFDDEDAVEVTDEAPSAKTINVFRDPQEIKRSATHLSWHPDGNRKLAVAYSCLNFQRAPEGMSNESYIWDLENPNRPEISLKPPSPLVTLEYNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKMSEPTEVVVMDITKKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTQAEKIVCTFSGHHGPVYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKYHMAYLTDGAWSPVRPAVFFTTKMDGTLDIWDFVFKQCDPALSLKVCDEALFSLRVQDSGSFIACGSQLGTATLLEVSSGLCTLQRNEKNTASSIFERETRREKILEARHREMRLKEKGKAEGRDDDLREEEPTLNLEELVSKAEEEFFDVIFTELKRKEAEAMKKKPKQRRPSLETDEEVEGEDGGEEERGSEESPTLEGQP", "length": 607, "header": "tr|I3LLI7-1|I3LLI7_PIG Isoform 1 of Dynein axonemal intermediate chain 2 OS=Sus scrofa OX=9823 GN=DNAI2 PE=3 SV=2 CANONICAL=I3LLI7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RNR5-1", "url": "https://www.uniprot.org/uniprotkb/I3LLI7/entry#A0A5G2RNR5-1", "sequence": { "sequence": "MEIVYVYVKRRSEFGKQCNFSDRQAELNIDIQPNPELAQQFVERNPVDKGIQCSTSMSEHEANTERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYINAITQLGSPTKFMVGTEQGIVISCNRKAKTQAEKIVCTFSGHHGPVYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKSAGRGGGRGCRGWRGQGPSL", "length": 210, "header": "tr|A0A5G2RNR5-1|I3LLI7_PIG Computationally mapped isoform of Dynein axonemal intermediate chain 2 OS=Sus scrofa OX=9823 GN=DNAI2 PE=3 SV=1 CANONICAL=I3LLI7-1" }, "locus": { "chromosome": "12", "start_pos": 6828622, "end_pos": 6816191, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087962.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087962.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074581.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074581.1" } ] } }, { "isoform_ac": "I3LLI7-1", "url": "https://www.uniprot.org/uniprotkb/I3LLI7/entry#I3LLI7-1", "sequence": { "sequence": "MEIVYVYVKRRSEFGKQCNFSDRQAELNIDIQPNPELAQQFVERNPVDKGIQCSTSMSEHEANTERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYINAITQLGSIMEHCIKQNNAIDIYQEYFDDEDAVEVTDEAPSAKTINVFRDPQEIKRSATHLSWHPDGNRKLAVAYSCLNFQRAPEGMSNESYIWDLENPNRPEISLKPPSPLVTLEYNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKMSEPTEVVVMDITKKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTQAEKIVCTFSGHHGPVYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKYHMAYLTDGAWSPVRPAVFFTTKMDGTLDIWDFVFKQCDPALSLKVCDEALFSLRVQDSGSFIACGSQLGTATLLEVSSGLCTLQRNEKNTASSIFERETRREKILEARHREMRLKEKGKAEGRDDDLREEEPTLNLEELVSKAEEEFFDVIFTELKRKEAEAMKKKPKQRRPSLETDEEVEGEDGGEEERGSEESPTLEGQP", "length": 607, "header": "tr|I3LLI7-1|I3LLI7_PIG Isoform 1 of Dynein axonemal intermediate chain 2 OS=Sus scrofa OX=9823 GN=DNAI2 PE=3 SV=2 CANONICAL=I3LLI7-1" }, "locus": { "chromosome": "12", "start_pos": 6828622, "end_pos": 6810592, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030835.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030835.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024957.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024957.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RNR5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RNR5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624095", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624095", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A2AC93-1", "protein_name": "Dynein axonemal intermediate chain 2", "gene_name": "Dnai2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIVYVYLKKRSEFGKQCNFSDRQAELNIDILPNPELAALYVERNPVDTGIQCSASMSEHEANTERFEMESCGVNHVEGGWPKDVNPQELEQTIRFRKKVEKDENYINAVMQLGSIMEHCIKQNNAIDIYEEYFDDEEAVEVTEEAPSAKTINVFRDPQEIKRTATHLSWHPDGNRKLAVAYSCLKFQRAPMSMNYDSYIWDLENPNRPEIALKPLSPLVTLEYNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKISEPIEVVIMDISRKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTQAEKIVCTFYGHHGPIYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPALSLKVCDDPLFCLRVQDNGCLIACGSELGTTTLLEVSSSLSTLQRNEKNIASSIFERETRREKILEARHREMRLKEKGKVEGKEDDQKEEEAALDLDELVGKAEEEFFEVIFSELKRKEAEALKKKPKPRKKSSVKVEAEEEVEENVGEEEEAGGIIGIDAVEDMSEEAGEEQEDVPT", "length": 623 }, "evidence": [ { "id": "I3LLI7", "url": "https://omabrowser.org/oma/group/I3LLI7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1NQ70-1", "protein_name": "Dynein axonemal intermediate chain 2", "gene_name": "DNAI2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEIAHVYTRKRSEFGRHCNFSDCPAKVCVDIQPDPSLADNFVLRNPVDACVQHGSEMSEHEANTERVEVESRGVNHVEGGWPRDINPQELEQTSRFRKKVEKEENYVNTITHLGALMEHCVKQNNAIDIYEEYFREEEADEFEDEAPSAKTINVIRDPNVTKRTATHLSWHPDRCKKLAVAYCSLEFQRSAEDMSFDSYIWDLENPNKPELVLKPSSPLVSLEYNPKDSHILVGGCYNGQMAYWDTRKGGLPVEVSTVEASHRDPVYGAIWLQSKTGTECFSASTDGQVLWWDIRKLSEPTEVLILDITRKELLENALGASTLEFEPTMPTKFMVGTEQGIVIACNRKAKTPPEKITSTYSGHHGPVYALARNPFFPKIFLTVGDWTARIWSEETKESSIMWTKYHLCYLTDGCWSTVRPSVFFTTKMDGTLDIWDILFKQNNPSLSLKICDEPLSSLRLQDNGCVVGCGSKLGTITLLEISSGLCTLQRNEKNLANAMFERETKREKILEARHREMRLKERARSEGQGLEAEEMLEESPQDALDRAQKEFFEVIEAELQRRARAEAQQPGSSKVKEHTEEEVVAQGEEGELPKYEGEEEEKDAAKEP", "length": 608 }, "evidence": [ { "id": "I3LLI7", "url": "https://omabrowser.org/oma/group/I3LLI7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "M9PC80-1", "protein_name": "Dynein, axonemal, intermediate chain 2, isoform C", "gene_name": "Dnai2", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEYIFKKERRSFGARVHFEDKDEVVFTENSNPELVKSYILKNPVDRVTQYAGQTSLSVANTERATYKSTGITHNEGGWPKDINMHDPEQTVRYKRKIEKDENYITQVMNLTKPMEHYIHQNNAVNIYENYFENLDPAPLPEPCKSRTVNVYRDPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDKSNQKCNSYIWEVENPNEPFLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTRHGKLPVMISEREVCHRDPVNSVLWNNSKSGTEFFSGGSDGQVLWWDTRKLTEPLDRLLMDPVKSDDQDLSRSYGISVLEYETTIPTRFMAGTEMGMLFSCNRKGKTPTEKIQIRMMCHLGPVYAITRNPAFVKNFLTVGDWCARIWSEDCRESSIIWTKSSSSMLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNEPVLTVKVCDEPLYCVRTNENGKFVSCGSQLGATFLVEVSDNMVMSAKNDKPLLTAMFERENRREKILEAKSRESKLKVKANHGQDQGDTMMVNGKINMAPFEAACEQAASEYFAAVEQERQRRLPGGKQDAEEADVSEAESSKL", "length": 585 }, "evidence": [ { "id": "I3LLI7", "url": "https://omabrowser.org/oma/group/I3LLI7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q66HC9-1", "protein_name": "Dynein axonemal intermediate chain 2", "gene_name": "Dnai2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEIVYVYVKKRSEFGKQCNFSDRQAELNIDISPNPELAALYVERNPVDTGIQCSASMSEHEANTERFEMENCGVNHVEGGWPKDVNPQELEQTIRFRKKVEKDENYINAVMQLGSIMEHCIKQNNAIDIYEEYFDDEEAVEVTEEAPSAKTINVFRDPQEIKRTATHLSWHPDGNKKLAVAYSCLQFQRSPMGMSHDSYIWDLENPNRPEIALKPSSPLITLEYNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKISEPTEVVIMDITRKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTPAEKIVCTFSGHHGPIYALQRNPFYPKNFLTVGDWAARIWSEESRESSIMWTRYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPALSLKVCDDPLFCLRVQDTGCLIACGSELGTTTLLEVSSSLSTLQRNERNIASSIFERETRREKILEARHREMRLKEKGKAEGRDDDQKEEETALDLDELVNKAEEEFFEVIFAELKRKEAEALKKKPKPKKASIEVEGEDELEDIAGEEEESGIIMGEDTGEDDMDEKNEGGAP", "length": 619 }, "evidence": [ { "id": "I3LLI7", "url": "https://omabrowser.org/oma/group/I3LLI7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9GZS0-1", "protein_name": "Dynein axonemal intermediate chain 2", "gene_name": "DNAI2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEIVYVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANSERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQNNAIDIYEEYFNDEEAMEVMEEDPSAKTINVFRDPQEIKRAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSYIWDLENPNKPELALKPSSPLVTLEFNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIESSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKMSEPTEVVILDITKKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTSAEKIVCTFPGHHGPIYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDPTLSLKVCDEALFCLRVQDNGCLIACGSQLGTTTLLEVSPGLSTLQRNEKNVASSMFERETRREKILEARHREMRLKEKGKAEGRDEEQTDEELAVDLEALVSKAEEEFFDIIFAELKKKEADAIKLTPVPQQPSPEEDQVVEEGEEAAGEEGDEEVEEDLA", "length": 605 }, "evidence": [ { "id": "I3LLI7", "url": "https://omabrowser.org/oma/group/I3LLI7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "dynein complex", "id": "GO:0030286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030286", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "external side of plasma membrane", "id": "GO:0009897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009897", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "sperm flagellum", "id": "GO:0036126", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036126", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "outer dynein arm", "id": "GO:0036157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036157", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "dynein axonemal particle", "id": "GO:0120293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120293", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "microtubule motor activity", "id": "GO:0003777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003777", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "dynein light chain binding", "id": "GO:0045503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045503", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "dynein heavy chain binding", "id": "GO:0045504", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045504", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cilium movement", "id": "GO:0003341", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003341", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" }, { "name": "outer dynein arm assembly", "id": "GO:0036158", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036158", "evidence": [ { "database": "UniProtKB", "id": "I3LLI7", "url": "https://www.uniprot.org/uniprotkb/I3LLI7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 196, "end_pos": 198, "annotation": "n_glycosylation_sequon" }, { "start_pos": 19, "end_pos": 21, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 196, "end_pos": 198 }, { "start_pos": 19, "end_pos": 21 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFF2-1", "uniprot_ac": "I3LFF2", "uniprot_id": "I3LFF2_PIG", "mass": { "chemical_mass": 82963.0, "monoisotopic_mass": 82963.0 }, "refseq": { "ac": "XP_020948419", "name": "centrosomal protein of 83 kDa isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948419" }, "gene_names": [ { "name": "CEP83", "type": "recommended", "evidence": [ { "id": "I3LFF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ] }, { "name": "CEP83", "type": "synonym", "evidence": [ { "id": "XP_020948419", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948419" } ] } ], "protein_names": [ { "name": "Centrosomal protein 83", "type": "synonym", "evidence": [ { "id": "I3LFF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFF2/entry#names_and_taxonomy" } ] }, { "name": "centrosomal protein of 83 kDa isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020948419", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948419" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CEP83", "url": "https://www.uniprot.org/uniprotkb/I3LFF2", "locus": { "chromosome": "5", "start_pos": 88899056, "end_pos": 88770532, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024563", "url": "https://www.ensembl.org/id/ENSSSCG00000024563" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024563", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024563", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100624783", "url": "https://www.ncbi.nlm.nih.gov/gene/100624783", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR052116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624783", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624783", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DAYKRKC", "url": "https://omabrowser.org/oma/group/DAYKRKC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LFF2", "url": "https://www.orthodb.org/?gene=I3LFF2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23170", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23170", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23170:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23170:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "R-SSC-5620912", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620912", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020948419", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948419", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5K1VHW3", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VHW3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VHW3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VHW3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFF2-1", "url": "https://www.uniprot.org/uniprotkb/I3LFF2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVVSLLTNMDTFPTTFPPGGDSGMTDSQSEFQKVLIDERLRCEHHKANYQVLKTEHTRLQAEYTKSQNELKRLINEKQTHQEKFQLLLQELRGELIEKTKDLEEMKLQVLTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAEYNKLRYEHTFLKSEFEHQKEKFARVLEEEKIKYQSEVARLEKDNEELHNQLFSADPTRDSKRVEQLIREKVHLHQKLKGLETEVAELRAEKENSGAQVESVQRIQVRQLAEMQATVRSLEAEKQSAKLQAERLEKELQASNEQNTTLISKLHKTEREVNTLTSKVKELKHSNKLEITDVKLEAARAKSELERERNKIQSELDGLQSDNEILKSAVEHHKMLLVEKDRELIRKVQAAKEEGYQKLVALQDEKLELESRLADLEKMKLEHDVWRQSEKDQCEEKLRASQMAEESARRELQSIRLKLQQQIVNIENAEKEKKENSDLKQQISRLQIQVTSLAQSENELLNSNQILKEMVEELKQECRNLRSQSEKARLEVEKALEEKQKHWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHENKLKRLQEKVEVLEAKREELETENQVLNRQNVPFEEYTRLQKRLKDIQRRHNEFRSLILVPNIPPTASLNPVSFHSSNVIPGMELSFPPHIQEEQHQRELSLLRKRLEELETTQRKQLEELGSPGE", "length": 701, "header": "tr|I3LFF2-1|I3LFF2_PIG Isoform 1 of Centrosomal protein 83 OS=Sus scrofa OX=9823 GN=CEP83 PE=4 SV=2 CANONICAL=I3LFF2-1" }, "isoforms": [ { "isoform_ac": "A0A5K1VHW3-1", "url": "https://www.uniprot.org/uniprotkb/I3LFF2/entry#A0A5K1VHW3-1", "sequence": { "sequence": "MVVSLLTNMDTFPTTFPPGGDSGMTDSQSEFQKVLIDERLRCEHHKANYQVLKTEHTRLQAEYTKSQNELKRLINEKQTHQEKFQLLLQELRGELIEKTKDLEEMKLQVLTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAEYNKLRYEHTFLKSEFEHQKEKFARVLEEEKIKYQSEVARLEKDNEELHNQLFSADPTRDSKRVEQLIREKVHLHQKLKGLETEVAELRAEKENSGAQVESVQRIQVRQLAEMQATVRSLEAEKQSAKLQAERLEKELQASNEQNTTLISKLHKTEREVNTLTSKVKELKHSNKLEITDVKLEAARAKSELERERNKIQSELDGLQSDNEILKSAVEHHKMLLVEKDRELIRKVQAAKEEGYQKLVALQDEKLELESRLADLEKMKLEHDVWRQSEKDQCEEKLRASQMAEESARRELQSIRLKLQQQIVNIENAEKEKKENSDLKQQISRLQIQVTSLAQSENELLNSNQILKEMVEELKQECRNLRSQSEKARLEVEKALEEKQKHWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHENKLKRLQEKVEVLEAKREELETEIRC", "length": 601, "header": "tr|A0A5K1VHW3-1|I3LFF2_PIG Computationally mapped isoform of Centrosomal protein 83 OS=Sus scrofa OX=9823 GN=CEP83 PE=4 SV=2 CANONICAL=I3LFF2-1" }, "locus": { "chromosome": "5", "start_pos": 88895044, "end_pos": 88819048, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032383.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032383.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020222.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020222.4" } ] } }, { "isoform_ac": "I3LFF2-1", "url": "https://www.uniprot.org/uniprotkb/I3LFF2/entry#I3LFF2-1", "sequence": { "sequence": "MVVSLLTNMDTFPTTFPPGGDSGMTDSQSEFQKVLIDERLRCEHHKANYQVLKTEHTRLQAEYTKSQNELKRLINEKQTHQEKFQLLLQELRGELIEKTKDLEEMKLQVLTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAEYNKLRYEHTFLKSEFEHQKEKFARVLEEEKIKYQSEVARLEKDNEELHNQLFSADPTRDSKRVEQLIREKVHLHQKLKGLETEVAELRAEKENSGAQVESVQRIQVRQLAEMQATVRSLEAEKQSAKLQAERLEKELQASNEQNTTLISKLHKTEREVNTLTSKVKELKHSNKLEITDVKLEAARAKSELERERNKIQSELDGLQSDNEILKSAVEHHKMLLVEKDRELIRKVQAAKEEGYQKLVALQDEKLELESRLADLEKMKLEHDVWRQSEKDQCEEKLRASQMAEESARRELQSIRLKLQQQIVNIENAEKEKKENSDLKQQISRLQIQVTSLAQSENELLNSNQILKEMVEELKQECRNLRSQSEKARLEVEKALEEKQKHWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHENKLKRLQEKVEVLEAKREELETENQVLNRQNVPFEEYTRLQKRLKDIQRRHNEFRSLILVPNIPPTASLNPVSFHSSNVIPGMELSFPPHIQEEQHQRELSLLRKRLEELETTQRKQLEELGSPGE", "length": 701, "header": "tr|I3LFF2-1|I3LFF2_PIG Isoform 1 of Centrosomal protein 83 OS=Sus scrofa OX=9823 GN=CEP83 PE=4 SV=2 CANONICAL=I3LFF2-1" }, "locus": { "chromosome": "5", "start_pos": 88898986, "end_pos": 88819048, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024929.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024929.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022794.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022794.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 641, "start_aa": "Thr", "end_pos": 641, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr641", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5K1VHW3", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VHW3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624783", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624783", "resource": "KEGG Pathway" }, { "id": "R-SSC-5620912", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620912", "resource": "Reactome", "description": "Anchoring of the basal body to the plasma membrane" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4IVY9-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "cep83", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDKMNPPALGQASALFPDLEPPGGVGKATVLLGGSTGLTSSDMEFQKMLIDERMRCENHKTNYQTLKVEHTRLQDQYTRAQNELKRLLSDRQVTQEKQQLLLAELRGELLDKTRDLEELKLQVLTPQRLELLRAQVQQELEAPIRERFNKLQEEAENYRSEYNKLRYDLTFLKSEFDHQKEEHARVLEERRIRHEADVARLEHDKEDLATQLQSGDPARDGKRVEALLREKAQLHQRLRGLEAEVTELRAERNNSGAQAENVQRIQIRQLAESQAAVKALEAEKQSIRMQLDRTESELRLSQEQNTLLTGKLHKAEREINSLNSQVEEMKHTHKLELSNVKLECVRSKGELERERDMLQCQVEGLQSDIEVMKSALERNKELISEKEREMVRRVQAAREEEIHKMATLQEEKLELENRLSELEQQKALQEVTGNSQKEEWEERLRAAQLGEESVRKELQNLRTKVQQQGQQLEELETLKAENADLRQQIAELNLQVGTLSHSESELLDTNNRLRESLERVREDLRSARTQMERTQQEAERLVEERRVEWLEEKHKLQDIEAELREKYSQAKERLQRAAFAQKKRKTMTELKENKLKDKIQLLEAKIAELEIEASAEKKKSSYSEEHAQLSKRLRELQRRHNEFRRLLLGNQMTSSTPLAQSLLIPNESIFSNIQEEQHQRELCVLRRRLEELENSQQQQLEELAAPLDRDRERLSSPRDALPDLS", "length": 725 }, "evidence": [ { "id": "I3LFF2", "url": "https://omabrowser.org/oma/group/I3LFF2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A3Q1NHE2-1", "protein_name": "Centrosomal protein 83", "gene_name": "CEP83", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVVHSVTNMDAFPTIFPPGGDSELRHSQSELQKMLIDERLRCEHHKTNYQTLKAEHTRLQDEYIKSQNELKRVLNEKQTHQEKFQLLLEEVRGELVEKTKDLEEMKLQVLTPQKLELLRAQIQQELETPMRERFKNLDEEVEKYRAEYNKLRYEHTFLKSEFEHQKEEFARILEEEKIKHKSEIARLEEDKELLNQLHSVDPTRESNRMEQLVRAKAHLHQKLKSLEAEIAELRAEKENSSAQAENVQRIQVRQLAEMQATVRSLEAEKQSAKLQAERLEKELQSSNEQNTALTSKLHKAEREVNTLASKVKELKHSNKLEITDIKLEAARAKSELERERNKIQSELDGLQSDNEILKSAVEHHKALLVEKDRELIRKVQAAKEEGYQKLLELQDEKLELESRLADLEKMKVEHDVCRQSEKDQCEEKLRASQMAEESARRELQSIRLKLQQQIVDIENAEKEKKENSDLKQQISGLQIQVTSLAQSENELLNSNQILKEMVERLKQECRNLRSQAEKAQLEVEKALEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHENKLKRLQEKVEILEAKREELETENQVLNRQNVPFEEYTRLQKRLKDIQRRHNEFRSLILVPNIPPSASINPVSLQSSTVIPGMELSFPPHMQEEQHQRELSLLRKRLEELETTQRKQLEELGSPGE", "length": 700 }, "evidence": [ { "id": "I3LFF2", "url": "https://omabrowser.org/oma/group/I3LFF2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V0YE85-1", "protein_name": "Centrosomal protein 83", "gene_name": "CEP83", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDSLGSLLPPVVGNGDAANSQELQKLLIDEKMRCEHHKANYQTIKAEHIRLQEEYTKSQDELKRLLVEKQTVHDKFQLLLAEYREELLGKTQELEKLKMQVLTPQKLELLKAQIQQELESPMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIKYEAEIARLEKDKEELHNQLVSVDPTRDSKRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLARSLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEVTNVKLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKYVLIYCSASKSLGKSVWSNFLNVIFSNNLLALCCGSSVNTVCFFRLELESRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQAEKAQLETEKTLEYKRIEWLEEKHMLTQRITEKEEKYNEVKNKLCRAAVAQKKRKTLNDNKQRRMQEKLQLLEAKIEELEKENQVLNRQNVSYEEYARLQKRLKDLQRRHNEFRSLILNPGIPSLNPISATSAPVPPPGPDVPFLFLQEEQHQRELSVLRKRLEDLETTQRKQLQELGPAGERLPARARRELTSSRGAEGAAVQSEDST", "length": 762 }, "evidence": [ { "id": "I3LFF2", "url": "https://omabrowser.org/oma/group/I3LFF2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q66H89-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "Cep83", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTFPSIFPPGGDSRLNPEPEFQSMLIDERVRCEHHKHNYQALKIEHKRLQEEYVKSQNELKRVLNEKQTNQEKFQLLLEELRGELVEKVKDMEAMKLQILTPQKLELVKAQLQQELEAPMRERFRTLDEEVERYRAEYNKLRYEHTFLKSEFEHQKEELTRISEEEKMKYKSEVARLEKDKEELHNQLLSVDPTRDSKRVEQLVREKTHLLQKLKSLEAEVAELRAEKENSGAQVENVQRIQVRQLAEMQATLRSLEAEKQSAKLQAERLEKELQSSNEQNTCLISKLHKADREISTLTSQVKELKHANKLEITDVKLEAARAKSELERERNKIQSELDGLQSDNEILKSTVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVVLQDEKLELENRLSDLEKMKVEHDVWRQSEKDQCEEKLRASQAAEEAARRELQSIRLKLQQQIVNTEKAEKEKLENSELKQQISHLQIQVTSLTQSENDLLNSNQMLKDMVERLKQECRHLRSQAEKVQLEVEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAATAQKKRKSLHENKLKRLQEKVEVLEAKKEELETENQVLNRQNVPFEEYTRLQKRLKDIQRRHNEFRSLILVPNMPPAASVNPANFQSSAIVPGVELSFPPHLQEEQHQRELSLLRKRLEELETTQRKQLEELGSPGE", "length": 692 }, "evidence": [ { "id": "I3LFF2", "url": "https://omabrowser.org/oma/group/I3LFF2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9D5R3-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "Cep83", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTFPSLFPPGGDSRLNPEPEFQNMLIDERVRCEHHKHNYQALKIEHKRLQEEYVKSQNELKRVLIEKQASQEKFQLLLEDLRGELVEKARDIEKMKLQVLTPQKLELVKAQLQQELEAPMRERFRTLDEEVERYRAEYNKLRYEYTFLKSEFEHQKEEFTRVSEEEKMKYKSEVARLEKDKEELHNQLLSVDPTRDSKRMEQLVREKTHLLQKLKSLEAEVAELRAEKENSGAQVENVQRIQVRQLAEMQATLRSLEAEKQSAKLQAERLEKELQSSNEQNTCLISKLHRADREISTLASEVKELKHANKLEITDIKLEAARAKSELERERNKIQSELDGLQSDNEILKSTVEHHKALLVEKDRELIRKVQAAKEEGYQKLMVLQDEKLELENRLSDLEKMKVERDVWRQSEKEQCEEKLRASQMAEEAARRELQSTRLKLQQQIVNTEKAEKEKLENSELKQQISHLQIQVTSLTQSENDLLNSNHMLKDMVERLKQECRNLRSQAEKAQLDVEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAATAQKKRKSLHENKLKRLQEKVEVLEAKKEELETENQVLNRQNVPFEEYTRLQKRLKDIQRRHNEFRSLILVPNMPPTASISPANFQSAVTVPGAELSFPPHLQEEQHQRELSLLRKRLEELETTQRKQLEELGSPGE", "length": 692 }, "evidence": [ { "id": "I3LFF2", "url": "https://omabrowser.org/oma/group/I3LFF2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y592-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "CEP83", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSTFTDMDTFPNNFPPGGDSGLTGSQSEFQKMLIDERLRCEHHKANYQTLKAEHTRLQNEHVKLQNELKHLFNEKQTQQEKLQLLLEELRGELVEKTKDLEEMKLQILTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAVYNKLRYEHTFLKSEFEHQKEEYARILDEGKIKYESEIARLEEDKEELRNQLLNVDLTKDSKRVEQLAREKVYLCQKLKGLEAEVAELKAEKENSEAQVENAQRIQVRQLAEMQATVRSLEAEKQSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTLSSKVKELKHSNKLEITDIKLETARAKSELERERNKIQSELDGLQSDNEILKAAVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVVLQDEKLELENRLADLEKMKVEHDVWRQSEKDQYEEKLRASQMAEEITRKELQSVRLKLQQQIVTIENAEKEKNENSDLKQQISSLQIQVTSLAQSENDLLNSNQMLKEMVERLKQECRNFRSQAEKAQLEAEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHENKLKRLQEKVEVLEAKKEELETENQVLNRQNVPFEDYTRLQKRLKDIQRRHNEFRSLILVPNMPPTASINPVSFQSSAMVPSMELPFPPHMQEEQHQRELSLLRKRLEELETTQRKQLEELGSSGE", "length": 701 }, "evidence": [ { "id": "I3LFF2", "url": "https://omabrowser.org/oma/group/I3LFF2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "pmid": "" }, { "name": "ciliary transition fiber", "id": "GO:0097539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097539", "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "pmid": "" }, { "name": "vesicle docking", "id": "GO:0048278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048278", "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "pmid": "" }, { "name": "establishment of centrosome localization", "id": "GO:0051660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051660", "evidence": [ { "database": "UniProtKB", "id": "I3LFF2", "url": "https://www.uniprot.org/uniprotkb/I3LFF2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 291, "end_pos": 293, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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{ "id": "I3LBE3-1", "url": "https://www.uniprot.org/uniprotkb/I3LBE3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELPDPVRQRLGNFSRTVFSDSNRTGPEYSEGPDNEMVSSLALQMSLYFNTYFFPLWWVSSVMMLQMKYSILPDYYKFIVVTVIILITLIEAIRLYLGYMGNLQEKVPELAGFWLLSLLLQLPLILFLLFNEGLTNLPLEKAVHIIFTIFLTFQVVSAFLTLRKMVNQLATRFHLQDFDQLSTSRGSMRRMRPCIEEI", "length": 198, "header": "tr|I3LBE3-1|I3LBE3_PIG Isoform 1 of Transmembrane protein 17 OS=Sus scrofa OX=9823 GN=TMEM17 PE=3 SV=1 CANONICAL=I3LBE3-1" }, "isoforms": [ { "isoform_ac": "A0A8D0SVW7-1", "url": "https://www.uniprot.org/uniprotkb/I3LBE3/entry#A0A8D0SVW7-1", "sequence": { "sequence": "MASRVLRAFGEFWVYLDSKASVCLKKDNEMVSSLALQMSLYFNTYFFPLWWVSSVMMLQMKYSILPDYYKFIVVTVIILITLIEAIRLYLGYMGNLQEKVPELAGFWLLSLLLQLPLILFLLFNEGLTNLPLEKAVHIIFTIFLTFQVVSAFLTLRKMVNQLATRFHLQDFDQLSTSRGSMRRMRPCIEEI", "length": 191, "header": "tr|A0A8D0SVW7-1|I3LBE3_PIG Computationally mapped isoform of Transmembrane protein 17 OS=Sus scrofa OX=9823 GN=TMEM17 PE=3 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF23321", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26955", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26955", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1369062", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1369062", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4F7C4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7C4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7C4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7C4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FC62", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FC62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FC62-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FC62-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RV25", "url": "https://www.uniprot.org/uniprotkb/F1RV25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RV25-1", "url": "https://www.uniprot.org/uniprotkb/F1RV25-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LB38-1", "url": "https://www.uniprot.org/uniprotkb/I3LB38-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKRHISVGRQTWALLCKNFLKKWRMKRETLLEWFFSFLLALFAFLFSSNLHQVNDFLQLPAMDLGRVDNFNDSNYIIAFAPESKTIQEIMNKVASAPFMKGRPILGWPDEKSMDELDLNYSTDAVRVVFTDTFSYHLKFFWGGRIPRMKEHRDHSAHCQIMDEKATCESSVFWEKGFVAFQAAINAAIIEITTNHSVMEKLMSVTGTNMKILPFVAQAGVTTDFFIFFCIISFSAFIYYVSINVTQERQHIKALMTMMGLRESAFWLSWGLMYTSFIFIMAVLMAVIIKSAPVVILTGFMVVFTLFFLYGLSLITLAFLVSVLVKKPFLTGLVVFLLTVLWGSLGFTALYRHLPAFLEWTLCLLSPFAFTAGMAQLIHLDYDVNANSHLDSSNNQYLIIATLFILVFDILLYLVLTLYLDKILPTEYGRQHSPWFFLKSFWFQHQSSGHVALENEIDSNCSSNDSFEPVSPEFQGKEAIRIRNLKKDYVKGKHEKVEALKGLVLDVYEGHITALLGHSGAGKTTLLNILSGLSVPTSGSVTIYNNKLSAVADLENLSQLTGVCPQVNVQFGFLTVRENLRLFAQIKGIQPQGAEQEVQRVLRDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGSDPLSRHRVWNLLKERKSDRVILFSTQFMDEADLLADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLKETCDPDSITSLVKQHIPEAKLAAQSEEKLVYILPLERTNRFPDLYRDLDRCSNQGIENYGVSMTTLNEVFLKLEGKSAIDESDIGTWGQLQSDRTKDTGSLVELERVLSSFNEPPKVIGGMALWRQQLRAIARVRFLKLKTEKRTLLTILLLFGVSFCPQLLEHLFYELYQKSYSWGLSPNMYFLSPEEPPRAPLTHLLVINKTGSSIDDFIYSLRQQDIALEVDALGTRNGPNESLYNGAITVSGDDKDYRFSVACNTKRLNCFPVLMDIISNGLLRIFNSSEHIQTDRSTYFEEHMSYEYGYLSNAFFWIPVAACFTPYIALSSIGDYKKKAYSQLRISGLYPSAYWFGQALVDIPLYFLILLLMQIMDYIFSPDEIIFIIQNLSVQILCSIGYVSSLVFLTYVISFIFRNGRKNSGIWSFFFLIITIFSIVAIDLSEYGFLGLFLCTILIPPFTLIGSLFIFSEISPDSMDYLGASEQQIVFLALLIPYLHFFIFLFVLRCLEMNFRKKSMRKDPVFRISPRGSSVFPNPEKPDGEDEDVQMERIKTANAVTVPDSDEKPVIIASCLRKEYAGKKRNCFARRKKKVATRNISFCVKKGEVIGLLGHNGAGKSTTIKMITGDTKPTAGQVLLKGSSGGDPLGFLGYCPQEDALWPSLTVKEHLEVFAAVKGLRKADAAAAIERLVDALKLQDQLKLPTKALSEGIKRKLCFTLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFKNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLAQVEALHREILRMFPQAARQERFSSLMVYKLPVEDVRPLSQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFDGEADLSVKWKLLPGDP", "length": 1623, "header": "tr|I3LB38-1|I3LB38_PIG Isoform 1 of ATP binding cassette subfamily A member 9 OS=Sus scrofa OX=9823 GN=ABCA9 PE=1 SV=2 CANONICAL=I3LB38-1" }, "isoforms": [ { "isoform_ac": "A0A8W4F7C4-1", "url": "https://www.uniprot.org/uniprotkb/I3LB38/entry#A0A8W4F7C4-1", "sequence": { "sequence": "MNKVASAPFMKGRPILGWPDEKSMDELDLNYSTDAVRVVFTDTFSYHLKFFWGGRIPRMKEHRDHSAHCQIMDEKATCESSVFWEKGFVAFQAAINAAIIEITTNHSVMEKLMSVTGTNMKILPFVAQAGVTTDFFIFFCIISFSAFIYYVSINVTQERQHIKALMTMMGLRESAFWLSWGLMYTSFIFIMAVLMAVIIKSAPVVILTGFMVVFTLFFLYGLSLITLAFLVSVLVKKPFLTGLVVFLLTVLWGSLGFTALYRHLPAFLEWTLCLLSPFAFTAGMAQLIHLDYDVNANSHLDSSNNQYLIIATLFILVFDILLYLVLTLYLDKILPTEYGRQHSPWFFLKSFWFQHQSSGHVALENEIDSNCSSNDSFEPVSPEFQGKEAIRIRNLKKDYVKGKHEKVEALKGLVLDVYEGHITALLGHSGAGKTTLLNILSGLSVPTSGSVTIYNNKLSAVADLENLSQLTGVCPQVNVQFGFLTVRENLRLFAQIKGIQPQGAEQEVLLLDEPTAGSDPLSRHRVWNLLKERKSDRVILFSTQFMDEADLLADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLKETCDPDSITSLVKQHIPEAKLAAQSEEKLVYILPLERTNRFPDLYRDLDRCSNQGIENYGVSMTTLNEVFLKLEGKSAIDESDIGTWGQLQSDRTKDTGSLVELERVLSSFNEPPKVIGGMALWRQQLRAIARVRFLKLKTEKRTLLTILLLFGVSFCPQLLEHLFYELYQKSYSWGLSPNMYFLSPEEPPRAPLTHLLVINKTGSSIDDFIYSLRQQDIALEVDALGTRNGPNESLYNGAITVSGDDKDYRFSVACNTKRLNCFPVLMDIISNGLLRIFNSSEHIQTDRSTYFEEHMSYEYGYLSNAFFWIPVAACFTPYIALSSIGDYKKKAYSQLRISGLYPSAYWFGQALVDIPLYFLILLLMQIMDYIFSPDEIIFIIQNLSVQILCSIGYVSSLVFLTYVISFIFRNGRKNSGIWSFFFLIITIFSIVAIDLSEYGFLGLFLCTILIPPFTLIGSLFIFSEISPDSMDYLGASEQQIVFLALLIPYLHFFIFLFVLRCLEMNFRKKSMRKDPVFRISPRGSSVFPNPEKPDGEDEDVQMERIKTANAVTVPDSDEKPVIIASCLRKEYAGKKRNCFARRKKKVATRNISFCVKKGEVIGLLGHNGAGKSTTIKMITGDTKPTAGQVLLKGSSGGDPLGFLGYCPQEDALWPSLTVKEHLEVFAAVKGLRKADAAAAIERLVDALKLQDQLKLPTKALSEGIKRKLCFTLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFKNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLAQVEALHREILRMFPQAARQERFSSLMVYKLPVEDVRPLSQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFDGEADLSVKWKLLPGDP", "length": 1493, "header": "tr|A0A8W4F7C4-1|I3LB38_PIG Computationally mapped isoform of ATP binding cassette subfamily A member 9 OS=Sus scrofa OX=9823 GN=ABCA9 PE=1 SV=1 CANONICAL=I3LB38-1" }, "locus": { "chromosome": "12", "start_pos": 11358643, "end_pos": 11306035, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096520.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096520.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075156.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075156.1" } ] } }, { "isoform_ac": "A0A8W4FC62-1", "url": "https://www.uniprot.org/uniprotkb/I3LB38/entry#A0A8W4FC62-1", "sequence": { "sequence": "MSKRHISVGRQTWALLCKNFLKKWRMKRETLLEWFFSFLLALFAFLFSSNLHQVNDFLQLPAMDLGRVDNFNDSNYIIAFAPESKTIQEIMNKVASAPFMKGRPILGWPDEKSMDELDLNYSTDAVRVVFTDTFSYHLKFFWGGRIPRMKEHRDHSAHCQIMDEKATCESSVFWEKGFVAFQAAINAAIIEITTNHSVMEKLMSVTGTNMKILPFVAQAGVTTDFFIFFCIISFSAFIYYVSINVTQERQHIKALMTMMGLRESAFWLSWGLMYTSFIFIMAVLMAVIIKSAPVVILTGFMVVFTLFFLYGLSLITLAFLVSVLVKKPFLTGLVVFLLTVLWGSLGFTALYRHLPAFLEWTLCLLSPFAFTAGMAQLIHLDYDVNANSHLDSSNNQYLIIATLFILVFDILLYLVLTLYLDKILPTEYGRQHSPWFFLKSFWFQHQSSGHVALENEIDSNCSSNDSFEPVSPEFQGKEAIRIRNLKKDYVKGKHEKVEALKGLVLDVYEGHITALLGHSGAGKTTLLNILSGLSVPTSGSVTIYNNKLSAVADLENLSQLTGVCPQVNVQFGFLTVRENLRLFAQIKGIQPQGAEQEVQRVLRDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGSDPLSRHRVWNLLKERKSDRVILFSTQFMDEADLLADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLKETCDPDSITSLVKQHIPEAKLAAQSEEKLVYILPLERTNRFPDLYRDLDRCSNQGIENYGVSMTTLNEVFLKLEGKSAIDESDIGTWGQLQSDRTKDTGSLVELERVLSSFNEPPKVIGGMALWRQQLRAIARVRFLKLKTEKRTLLTILLLFGVSFCPQLLEHLFYELYQKSYSWGLSPNMYFLSPEEPPRAPLTHLLVINKTGSSIDDFIYSLRQQDIALEVDALGTRNGPNESLYNGAITVSGDDKDYRFSVACNTKRLNCFPVLMDIISNGLLRIFNSSEHIQTDRSTYFEEHMSYEYGYLSNAFFWIPVAACFTPYIALSSIGDYKKKAYSQLRISGLYPSAYWFGQALVDIPLYFLILLLMQIMDYIFSPDEIIFIIQNLSVQILCSIGYVSSLVFLTYVISFIFRNGRKNSGIWSFFFLIITIFSIVAIDLSEYGFLGLFLCTILIPPFTLIGSLFIFSEISPDSMDYLGASEQQIVFLALLIPYLHFFIFLFVLRCLEMNFRKKSMRKDPVFRISPRGSSVFPNPEKPDGEDEDVQMERIKTANAVTVPDSDEKPVIIASCLRKEYAGKKRNCFARRKKKVATRNISFCVKKGEVIGLLGHNGAGKSTTIKMITGDTKPTAGQVLLKGSSGGDPLGFLGYCPQEDALWPSLTVKEHLEVFAAVKGLRKADAAAAIERQAIRATFKNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLAQVEALHREILRMFPQAARQERFSSLMVYKLPVEDVRPLSQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFDGEADLSVKWKLLPGDP", "length": 1566, "header": "tr|A0A8W4FC62-1|I3LB38_PIG Computationally mapped isoform of ATP binding cassette subfamily A member 9 OS=Sus scrofa OX=9823 GN=ABCA9 PE=1 SV=1 CANONICAL=I3LB38-1" }, "locus": { "chromosome": "12", "start_pos": 11358643, "end_pos": 11303691, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105441.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105441.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076848.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076848.1" } ] } }, { "isoform_ac": "F1RV25-1", "url": "https://www.uniprot.org/uniprotkb/I3LB38/entry#F1RV25-1", "sequence": { "sequence": "MSKRHISVGRQTWALLCKNFLKKWRMKRETLLEWFFSFLLALFAFLFSSNLHQVNDFLQLPAMDLGRVDNFNDSNYIIAFAPESKTIQEIMNKVASAPFMKGRPILGWPDEKSMDELDLNYSTDAVRVVFTDTFSYHLKFFWGGRIPRMKEHRDHSAHCQIMDEKATCESSVFWEKGFVAFQAAINAAIIEITTNHSVMEKLMSVTGTNMKILPFVAQAGVTTDFFIFFCIISFSAFIYYVSINVTQERQHIKALMTMMGLRESAFWLSWGLMYTSFIFIMAVLMAVIIKSAPVVILTGFMVVFTLFFLYGLSLITLAFLVSVLVKKPFLTGLVVFLLTVLWGSLGFTALYRHLPAFLEWTLCLLSPFAFTAGMAQLIHLDYDVNANSHLDSSNNQYLIIATLFILVFDILLYLVLTLYLDKILPTEYGRQHSPWFFLKSFWFQHQSSGHVALENEIDSNCSSNDSFEPVSPEFQGKEAIRIRNLKKDYVKGKHEKVEALKGLVLDVYEGHITALLGHSGAGKTTLLNILSGLSVPTSGSVTIYNNKLSAVADLENLSQLTGVCPQVNVQFGFLTVRENLRLFAQIKGIQPQGAEQEVQRVLRDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGSDPLSRHRVWNLLKERKSDRVILFSTQFMDEADLLADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLKETCDPDSITSLVKQHIPEAKLAAQSEEKLVYILPLERTNRFPDLYRDLDRCSNQGIENYGVSMTTLNEVFLKLEGKSAIDESDIGTWGQLQSDRTKDTGSLVELERVLSSFNEPPKVIGGMALWRQQLRAIARVRFLKLKTEKRTLLTILLLFGVSFCPQLLEHLFYELYQKSYSWGLSPNMYFLSPEEPPRAPLTHLLVINKTGSSIDDFIYSLRQQDIALEVDALGTRNGPNESLYNGAITVSGDDKDYRFSVACNTKRLNCFPVLMDIISNGLLRIFNSSEHIQTDRSTYFEEHMSYEYGYLSNAFFWIPVAACFTPYIALSSIGDYKKKAYSQLRISGLYPSAYWFGQALVDIPLYFLILLLMQIMDYIFSPDEIIFIIQNLSVQITIFSIVAIDLSEYGFLGLFLCTILIPPFTLIGSLFIFSEISPDSMDYLGASEQQIVFLALLIPYLHFFIFLFVLRCLEMNFRKKSMRKDPVFRISPRGSSVFPNPEKPDGEDEDVQMERIKTANAVTVPDSDEKPVIIASCLRKEYAGKKRNCFARRKKKVATRNISFCVKKGEVIGLLGHNGAGKSTTIKMITGDTKPTAGQVLLKGSSGGDPLGFLGYCPQEDALWPSLTVKEHLEVFAAVKGLRKADAAAAIERLVDALKLQDQLKLPTKALSEGIKRKLCFTLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFKNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLAQVEALHREILRMFPQAARQERFSSLMVYKLPVEDVRPLSQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFDGEADLSVKWKLLPGDP", "length": 1585, "header": "tr|F1RV25-1|F1RV25_PIG Computationally mapped isoform of ATP binding cassette subfamily A member 9 OS=Sus scrofa OX=9823 GN=ABCA9 PE=1 SV=3 CANONICAL=I3LB38-1" }, "locus": { "chromosome": "12", "start_pos": 11358643, "end_pos": 11303691, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018786.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018786.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018284.4", "url": "https://www.ensembl.org/id/ENSSSCP00000018284.4" } ] } }, { "isoform_ac": "I3LB38-1", "url": "https://www.uniprot.org/uniprotkb/I3LB38/entry#I3LB38-1", "sequence": { "sequence": "MSKRHISVGRQTWALLCKNFLKKWRMKRETLLEWFFSFLLALFAFLFSSNLHQVNDFLQLPAMDLGRVDNFNDSNYIIAFAPESKTIQEIMNKVASAPFMKGRPILGWPDEKSMDELDLNYSTDAVRVVFTDTFSYHLKFFWGGRIPRMKEHRDHSAHCQIMDEKATCESSVFWEKGFVAFQAAINAAIIEITTNHSVMEKLMSVTGTNMKILPFVAQAGVTTDFFIFFCIISFSAFIYYVSINVTQERQHIKALMTMMGLRESAFWLSWGLMYTSFIFIMAVLMAVIIKSAPVVILTGFMVVFTLFFLYGLSLITLAFLVSVLVKKPFLTGLVVFLLTVLWGSLGFTALYRHLPAFLEWTLCLLSPFAFTAGMAQLIHLDYDVNANSHLDSSNNQYLIIATLFILVFDILLYLVLTLYLDKILPTEYGRQHSPWFFLKSFWFQHQSSGHVALENEIDSNCSSNDSFEPVSPEFQGKEAIRIRNLKKDYVKGKHEKVEALKGLVLDVYEGHITALLGHSGAGKTTLLNILSGLSVPTSGSVTIYNNKLSAVADLENLSQLTGVCPQVNVQFGFLTVRENLRLFAQIKGIQPQGAEQEVQRVLRDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGSDPLSRHRVWNLLKERKSDRVILFSTQFMDEADLLADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLKETCDPDSITSLVKQHIPEAKLAAQSEEKLVYILPLERTNRFPDLYRDLDRCSNQGIENYGVSMTTLNEVFLKLEGKSAIDESDIGTWGQLQSDRTKDTGSLVELERVLSSFNEPPKVIGGMALWRQQLRAIARVRFLKLKTEKRTLLTILLLFGVSFCPQLLEHLFYELYQKSYSWGLSPNMYFLSPEEPPRAPLTHLLVINKTGSSIDDFIYSLRQQDIALEVDALGTRNGPNESLYNGAITVSGDDKDYRFSVACNTKRLNCFPVLMDIISNGLLRIFNSSEHIQTDRSTYFEEHMSYEYGYLSNAFFWIPVAACFTPYIALSSIGDYKKKAYSQLRISGLYPSAYWFGQALVDIPLYFLILLLMQIMDYIFSPDEIIFIIQNLSVQILCSIGYVSSLVFLTYVISFIFRNGRKNSGIWSFFFLIITIFSIVAIDLSEYGFLGLFLCTILIPPFTLIGSLFIFSEISPDSMDYLGASEQQIVFLALLIPYLHFFIFLFVLRCLEMNFRKKSMRKDPVFRISPRGSSVFPNPEKPDGEDEDVQMERIKTANAVTVPDSDEKPVIIASCLRKEYAGKKRNCFARRKKKVATRNISFCVKKGEVIGLLGHNGAGKSTTIKMITGDTKPTAGQVLLKGSSGGDPLGFLGYCPQEDALWPSLTVKEHLEVFAAVKGLRKADAAAAIERLVDALKLQDQLKLPTKALSEGIKRKLCFTLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFKNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLAQVEALHREILRMFPQAARQERFSSLMVYKLPVEDVRPLSQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFDGEADLSVKWKLLPGDP", "length": 1623, "header": "tr|I3LB38-1|I3LB38_PIG Isoform 1 of ATP binding cassette subfamily A member 9 OS=Sus scrofa OX=9823 GN=ABCA9 PE=1 SV=2 CANONICAL=I3LB38-1" }, "locus": { "chromosome": "12", "start_pos": 11358643, "end_pos": 11303691, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023395.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023395.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021257.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021257.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F7C4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7C4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1369062", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1369062", "resource": "Reactome", "description": "ABC transporters in lipid homeostasis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K3S4-1", "protein_name": "ATP binding cassette subfamily A member 9", "gene_name": "Abca9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKFLKISASAFLRTFTSTSLKSFKKNKQVKMRKRRLRLGQQMWALLCKNWLRKFRMRRETLLEWLLSFLLILLAYQLSSNLHQVHDAPEMSMMDLGRVDDFNDSNYIIVFAPESETTHEIMNIAALAPFMKGRTIVACPDESSMSELNLNYSIDAVRVIFKDTFSYHLKFSWGQRIPKTKEHKDHTAPCEPFKNKMVCENSVFWEKGFVAFQTAINAGIIEVTTNHSVMEELMSVIGSVMKMQPFIAQGGVATDFFIFFCVISFSSFIYYLSVNVTQERQSITTLMAMMGLRESAFWLSWGLMYAGFILVVATLMSLIVKSTQVVVLTGFMVVFLLFLLYGLSLITLSFLMSVLLKKPFLTGLAVFLLTVFWGSLGFTALYKHLPAFMEWILCFLSPFAFINGMAQLIHLDYDVNSNVNLNSPNNSYLILATLFMLVLDALLYLALALYFDKILLSKYGHQRSPLFFLKSSYWFQRRGADHVVLENEIDSAPSLNDSLEPVSPEFQGKEAIRIKNLRKEYTGKHGKVEALRGLGFDIYEGQITALLGHSGAGKTTLINTLSGLSPPTTGSITIYNQTVSETEDSYAVPKLTGVCPQSNIQFGFLTVQENLRLFAKIKGILPQEVEQEVRQVLRDLEMENIQDTLAQNLSGGQKRKLTFGIAILGDPQVLLLDEPTAGLDPLSRHHIWNLLKERRSGRVIVFSTQFMDEADILADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLNETCDPESITSLVKKHIPDARLTAQSDEQLVYILPLERTNKFPDLYRDLDRCSNHGIEDYDVSMTTLNEVFLKLEGKSMAEEPDAGVCGRLLSDGAKDVESLVELERVLPLDSSGSSVSGMALWRQQLCAVAKVRFLKLKNERRSLMTMLLLFGISFVPQLLEHLVYKVYHKSYSWGLSPSMYFLSPGQLPQDPLTHLLVINKTGSSIDNFIHSLRQQGIALDVDALGTRNGKEEALYNGAVTVLGDEKDLRFSVACNAKRLNCFPVLADILSNGLLGIFNSSERIQTDRSTVFEDHMLYEYGFMSNAFFWIPVAASLTPYIAMGSISDHKKKVLSQLWTSGLYPSAYWCGQALVDIPIYFLILLLMQIMDSVFSSEEIMSVIESLLIQIPCSIGYASSLIFLTYVISFVFRNGRKNSGIWSFFFLIVTIFFIVATDINEYGFLQLLFCTLLIPPFTLIGSLLIFSEVSYDSVDYLGSSESQLVFLALLIPYLHFLLFFFILRCLERYIRKKTLRVDPVFRISPRSCRAFPNPEDPGEEDEDVQMERVRTSGAMTTPQMDEKPVIIASCLRKEYTVKTKRCFSKTKKKIATRNISFCVKKGEVLGLLGHNGAGKSTTISMITGDTVPTAGQVFLKGSSGSAALGFLGYCPQENVLWPNLTVKEHLEVYAAVKGLRKKEAIVTITRLVNALKLQDQLKALVKTLSEGVKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFTNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKLKTPALVESLNTEILRLFPQAARQERYSSLMVYKLPVEDVRPLSEAFFKLERLKENFDLEEYSLSQSTLEQVFLELSKEQELGDFDEEGSSSVKWKLLPQEEL", "length": 1653 }, "evidence": [ { "id": "I3LB38", "url": "https://omabrowser.org/oma/group/I3LB38/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7KBS0-1", "protein_name": "ATP-binding cassette sub-family A member 9 isoform X1", "gene_name": "Abca9", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MRKRHLRVGQQTWALFCKNWLKKCRMRRETVMEWFFSLLLVFFAYLLSFNLHQVHDAPQIPEMDLGRVDNFNDSNYIIAFAPESKTIYEIMSIVASTPFMKGRRIVACPDETSMNELDLNYSMDAVRVIFKDTFSYHLKFPWGHRIPPVKEHKDHSAPCETVNNTITCRNSVFWEKGFVAFQAAINAGIIEMTTHHSVMEELMSVIGVNMKILPFIAQGGVTTDFLIFFCVISFSPFIYYLSVNITQERQYITILMAMMGLRESAFWLSWGLMYAGFILVVATLMSLIVKSAQIVVLTGFMVVFLLFLLYGLSLITLAFLMSVLLKKPFLTGLAVFLLTIFWGSLGFTALYKHLPAFMEWTLCFLSPFAFTAGMAQLIHLDYDVNSNVNLDSPNNSYLIIATLFMLVLDALLYLVLALYFDRVLLSKYGHRRSPLFFLKSSYWFQHRGANHVVLENEIDSDPSLNDSFEPVPPEFQEKEAIRIKNLKKEYAGKHGKVEALRGLGFDIYEGQITALLGHSGAGKTTLINILCGLSPPTTGSITIYNQTLSEVDDFDAVIKLTGVCPQSNIQFGFLTVRENLRLFAKIKGILPHEVEQEVQRVLQDLEMENIQDILAQNLSGGQKRKLTFGIAILGDPQVLLLDEPTAGLDPFSRHCIWNLLKERKLDRVIVFSTQFMDEADILADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLNEMCDPESITSLVKKHIPDARLTTQSEERLMYILPLESTNKFPDLYRDLDRCSNQGIENYGVSMTTLNEVFLKLEGKSMTDESGDRSYSSGVGISGHLQSEGAKDMGSLVELEQVLLSLDSSGNTVSGMALWRQQLCAVAKVRFLKLKNERKSLMTMLLLFGISFLPQLLEHLFYELYHKSYSWGLSPSMYFLSPGQPPQDPLTHLLVINKTGSSIDKFVHSLRQQSIALDVDVLGTRNGREEALYNGAITVLGDEKDLRFSIACNTKRLNCFPVLMDIISNGLLGIFNSSQRIQTERSTFFEEQMLYESGYVSNALWVPLAASLAPYVAMSSISDYKKKILSQLWVSGLYPSAYWCGQALVDIPLYFLILLLMQIMECVFSQEEIIFIMENLLIQVLCSIGYASSLVFLTYIISFIFRNGRKNSGIWSFFFLIVTIFSLVATDINERGLLGLLLCTFLIPPFTLIGSLLIFSEISYDSVDSSGASDSQVEFLALLIPYFHFLLFFFVLRCLERYFRKKSLRMDPVFRISPRSCNAFPNPEDPGEEDEDVQMERIRTADSVTALQIDEKPVIIASCLRKEYTGKKKKCFSKAKKKIATRNISFCVKKGEVLGLLGHNGAGKSTTISMITGDTKPTAGQVFLKGCGEDAALGFLGYCPQENVLWPILTVKDHLEAYAAVKGLKKKDALVTVTRLVNALKLQDQLKAPVKTLSEGIKRKLCFALSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRASFTNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLAQVEPLNMEIMKLFPQAARQERYSSLMVYKLPVEDVWPLSQAFFKLERLKENFDLEEYSLSQSTLEQVFLELSKEQELDDFDEELDSSVKWKLLPQEEL", "length": 1630 }, "evidence": [ { "id": "I3LB38", "url": "https://omabrowser.org/oma/group/I3LB38/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8IUA7-1", "protein_name": "ATP-binding cassette sub-family A member 9", "gene_name": "ABCA9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSKRRMSVGQQTWALLCKNCLKKWRMKRQTLLEWLFSFLLVLFLYLFFSNLHQVHDTPQMSSMDLGRVDSFNDTNYVIAFAPESKTTQEIMNKVASAPFLKGRTIMGWPDEKSMDELDLNYSIDAVRVIFTDTFSYHLKFSWGHRIPMMKEHRDHSAHCQAVNEKMKCEGSEFWEKGFVAFQAAINAAIIEIATNHSVMEQLMSVTGVHMKILPFVAQGGVATDFFIFFCIISFSTFIYYVSVNVTQERQYITSLMTMMGLRESAFWLSWGLMYAGFILIMATLMALIVKSAQIVVLTGFVMVFTLFLLYGLSLITLAFLMSVLIKKPFLTGLVVFLLIVFWGILGFPALYTRLPAFLEWTLCLLSPFAFTVGMAQLIHLDYDVNSNAHLDSSQNPYLIIATLFMLVFDTLLYLVLTLYFDKILPAEYGHRCSPLFFLKSCFWFQHGRANHVVLENETDSDPTPNDCFEPVSPEFCGKEAIRIKNLKKEYAGKCERVEALKGVVFDIYEGQITALLGHSGAGKTTLLNILSGLSVPTSGSVTVYNHTLSRMADIENISKFTGFCPQSNVQFGFLTVKENLRLFAKIKGILPHEVEKEVQRVVQELEMENIQDILAQNLSGGQNRKLTFGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKEGKSDRVILFSTQFIDEADILADRKVFISNGKLKCAGSSLFLKKKWGIGYHLSLHLNERCDPESITSLVKQHISDAKLTAQSEEKLVYILPLERTNKFPELYRDLDRCSNQGIEDYGVSITTLNEVFLKLEGKSTIDESDIGIWGQLQTDGAKDIGSLVELEQVLSSFHETRKTISGVALWRQQVCAIAKVRFLKLKKERKSLWTILLLFGISFIPQLLEHLFYESYQKSYPWELSPNTYFLSPGQQPQDPLTHLLVINKTGSTIDNFLHSLRRQNIAIEVDAFGTRNGTDDPSYNGAIIVSGDEKDHRFSIACNTKRLNCFPVLLDVISNGLLGIFNSSEHIQTDRSTFFEEHMDYEYGYRSNTFFWIPMAASFTPYIAMSSIGDYKKKAHSQLRISGLYPSAYWFGQALVDVSLYFLILLLMQIMDYIFSPEEIIFIIQNLLIQILCSIGYVSSLVFLTYVISFIFRNGRKNSGIWSFFFLIVVIFSIVATDLNEYGFLGLFFGTMLIPPFTLIGSLFIFSEISPDSMDYLGASESEIVYLALLIPYLHFLIFLFILRCLEMNCRKKLMRKDPVFRISPRSNAIFPNPEEPEGEEEDIQMERMRTVNAMAVRDFDETPVIIASCLRKEYAGKKKNCFSKRKKKIATRNVSFCVKKGEVIGLLGHNGAGKSTTIKMITGDTKPTAGQVILKGSGGGEPLGFLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAMIAITRLVDALKLQDQLKAPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQVIRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKLKNLAQMEPLHAEILRLFPQAAQQERFSSLMVYKLPVEDVRPLSQAFFKLEIVKQSFDLEEYSLSQSTLEQVFLELSKEQELGDLEEDFDPSVKWKLLLQEEP", "length": 1624 }, "evidence": [ { "id": "I3LB38", "url": "https://omabrowser.org/oma/group/I3LB38/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K449-1", "protein_name": "ATP-binding cassette sub-family A member 9", "gene_name": "Abca9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRKRHLRLGQQMWALLCKNWLRKFRMRRETLLEWLFSLLLILFVYQLSSNLHQVHDAPEMSVVDLGRVDNFNDSNYMMVFAPESEATHEIMNKVASAPFMKGRTIVACPDEKSMNELDLNYSIDAVRVIFKDTFSYHLKFSWGQRIPKTKEHKDHSAPCEPLNNKMICENSAFWEKGFVAFQAAINAGIIEMITNHSVMEELMSVIGSNMKMPPFIAQGGVATDFFIFFCVISFSSLIYYLSVNITQERQYMTTLMAMMGLRESAFWLSWSLMYAGFILVVAVLMSLIVKSAQVVVLTGFMVVFLLFLFYGLSLITLSFLMSVLIKKPFLTGLAIFILTVFWGSLGFTALYKHLPAFVEWTLCFLSPFAFTTGMAQLIHLDYDVNSNVNLNSPNNSYLIMATLFMLVLDALLYLVLALYFDKITLSKYGHQRSPLFFLKSSYWFKRRGASHVVLENEIDSDPSLNDSLEPVSPEFQGKEAIRIKNLKKEYSGKHGKVEALRGLGFDIYEGQITALLGHSGAGKTTLINTLSGLSPPTTGSVTIYNQTVSEMDDSDAVLTITGVCPQSNVQFGFLTVRENLRLFAKIKGILPHEVEQEVQQVLQDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKERRAGRVIVFSTQFMDEADILADRKVFISNGRLKCAGSSLFLKKKWGIGYHLSLHLNEACDPEGITSLVKKHISDARLTTQSEERLVYILPLERTNKFPDLYRDLDRCSNQGIEDYGVSMTTLNEVFLKLEGKSMADESDVGICGRLQSDGARDMESLVELEQVLSLDSSGSSVSGMALWRQQLCAVAKVRFFKLKNERKSLMTVLLLFGISFVPQLLEHLVYKVYHKSYSWGLSPSMYFLSPGQPPQDPLTHLLVINRTGSSIDNFVHALRQQGIALDLDALGTRNGTEEALYNGAITVLGEEKALRFSVACNAKRLNCFPVLMDIISNGLLGIFNSSERIQTDRSTVFEEHMLYEYGFMSNAFFWIPVAASLTPYIAMGSISDHKKKVLSQLWTSGLYPSAYWCGQALVDIPIYFLILFLMQIMDSVFSSEEFISVMESLLIQIPCSIGYASSLIFMTYVISFIFRNGRKNSGIWSFFFLIVTIFFIIATDINEYGFLELLICTFLVPPFTLIGSLLIFSEVSYDSVDYLGTSESQLVFLALLIPYLHFLLFFFILRCLERYLRKKSLRVDPVFRISPRSCPAVPNPEEPGEEDEDVQMERVRTTGAMATLQTDEKPVIIASCLRKEYIGRTKRCFSKMKKKIATRNISFCVKKGEVLGLLGHNGAGKSTTISMITGDTIPTAGQVFLKGSGGGAALGFLGYCPQENVLWPNLTVKEHLELYAAVKGLKKKDAVVTITRLVNALKLQDHLKALVRTLSEGVKRKLCFVLSILGNPPVVLLDEPSTGMDPEGQQQMWQAIRATFTNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTPSQVEPLNTEIMRLFPQAARQERYSSLMVYKLPVEDVRPLSEAFFKLERLKENFDLEEYSLSQSTLEQVFLELSKEQELDDFGEEANSSVKWKLLPQEEL", "length": 1623 }, "evidence": [ { "id": "I3LB38", "url": "https://omabrowser.org/oma/group/I3LB38/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" }, { "name": "ABC-type transporter activity", "id": "GO:0140359", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140359", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" }, { "name": "lipid transporter activity", "id": "GO:0005319", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005319", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" }, { "name": "ATPase-coupled transmembrane transporter activity", "id": "GO:0042626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042626", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "I3LB38", "url": "https://www.uniprot.org/uniprotkb/I3LB38" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1103, "end_pos": 1105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 120, "end_pos": 122, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1311, "end_pos": 1313, "annotation": "n_glycosylation_sequon" }, { "start_pos": 195, "end_pos": 197, "annotation": "n_glycosylation_sequon" }, { "start_pos": 244, "end_pos": 246, "annotation": "n_glycosylation_sequon" }, { "start_pos": 460, "end_pos": 462, "annotation": "n_glycosylation_sequon" }, { "start_pos": 464, "end_pos": 466, "annotation": "n_glycosylation_sequon" }, { "start_pos": 556, "end_pos": 558, "annotation": "n_glycosylation_sequon" }, { "start_pos": 617, "end_pos": 619, "annotation": "n_glycosylation_sequon" }, { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" }, { "start_pos": 920, "end_pos": 922, "annotation": "n_glycosylation_sequon" }, { "start_pos": 952, "end_pos": 954, "annotation": "n_glycosylation_sequon" }, { "start_pos": 999, "end_pos": 1001, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LB38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LB38" }, { "id": "PS50893", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50893" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ABC transporter", "eco_id": "ECO_0000259", "start_pos": 480, "end_pos": 716, "start_aa": "Ile", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1103, "end_pos": 1105 }, { "start_pos": 120, "end_pos": 122 }, { "start_pos": 1311, "end_pos": 1313 }, { "start_pos": 195, "end_pos": 197 }, { "start_pos": 244, "end_pos": 246 }, { "start_pos": 460, "end_pos": 462 }, { "start_pos": 464, "end_pos": 466 }, { "start_pos": 556, "end_pos": 558 }, { "start_pos": 617, "end_pos": 619 }, { "start_pos": 72, "end_pos": 74 }, { "start_pos": 920, "end_pos": 922 }, { "start_pos": 952, "end_pos": 954 }, { "start_pos": 999, "end_pos": 1001 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LH52-1", "uniprot_ac": "I3LH52", "uniprot_id": "I3LH52_PIG", "mass": { "chemical_mass": 66483.0, "monoisotopic_mass": 66483.0 }, "refseq": { "ac": "XP_005669070", "name": "protein phosphatase 1D", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669070" }, "gene_names": [ { "name": "PPM1D", "type": "recommended", "evidence": [ { "id": "I3LH52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ] }, { "name": "PPM1D", "type": "synonym", "evidence": [ { "id": "XP_005669070", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669070" } ] } ], "protein_names": [ { "name": "Protein phosphatase, Mg2+/Mn2+ dependent 1D", "type": "synonym", "evidence": [ { "id": "I3LH52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH52/entry#names_and_taxonomy" } ] }, { "name": "protein phosphatase 1D", "type": "synonym", "evidence": [ { "id": "XP_005669070", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669070" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPM1D", "url": "https://www.uniprot.org/uniprotkb/I3LH52", "locus": { "chromosome": "12", "start_pos": 37485588, "end_pos": 37536146, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026665", "url": "https://www.ensembl.org/id/ENSSSCG00000026665" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026665", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026665", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00143", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00143", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100525714", "url": "https://www.ncbi.nlm.nih.gov/gene/100525714", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000222", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000222", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001932", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001932", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015655", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015655", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036457", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036457", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525714", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525714", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NTIMDQK", "url": "https://omabrowser.org/oma/group/NTIMDQK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LH52", "url": "https://www.orthodb.org/?gene=I3LH52", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47992", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47992", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00481", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00481", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8878166", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8878166", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005669070", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669070", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4F867", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F867", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F867-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F867-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LH52-1", "url": "https://www.uniprot.org/uniprotkb/I3LH52-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTTEEKPSPRRSLSQPSPPQRTPPALPGGEVSGKGPAVAAREARDAPPDAGASPAPGRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEWPKTMTGLPSTSGTTASVVIIRGLKMYVAHVGDSGVVLGIQDDPKDDFIRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAVSMCQDQEEKKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPGVDSKGNFANEDELYLNLTDSPSYNSQETCVITPSPCSTPPVKSLEEDPWPRLNSKDHISALVRSSAFSENYLEVPTEMARGNIQPAVISSKDPEPLEENCTKALTLRIHDSLNNSLSVGLVPTNSTNSVMDQKNLKMSTPGQMKAQEVERTPPANFKRTLEESNSGPLMKKHRRNGLSRNSGAQPASLPTTSQRKNSVKLTMRRRLRGQKKIGNPLLHQHRKTVCVC", "length": 605, "header": "tr|I3LH52-1|I3LH52_PIG Isoform 1 of Protein phosphatase, Mg2+/Mn2+ dependent 1D OS=Sus scrofa OX=9823 GN=PPM1D PE=3 SV=4 CANONICAL=I3LH52-1" }, "isoforms": [ { "isoform_ac": "A0A8W4F867-1", "url": "https://www.uniprot.org/uniprotkb/I3LH52/entry#A0A8W4F867-1", "sequence": { "sequence": "MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTTEEKPSPRRSLSQPSPPQRTPPALPGGEVSGKGPAVAAREARDAPPDAGASPAPGRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAPGWGP", "length": 163, "header": "tr|A0A8W4F867-1|I3LH52_PIG Computationally mapped isoform of Protein phosphatase, Mg2+/Mn2+ dependent 1D OS=Sus scrofa OX=9823 GN=PPM1D PE=3 SV=1 CANONICAL=I3LH52-1" }, "locus": { "chromosome": "12", "start_pos": 37535938, "end_pos": 37535400, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105551.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105551.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075554.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075554.1" } ] } }, { "isoform_ac": "I3LH52-1", "url": "https://www.uniprot.org/uniprotkb/I3LH52/entry#I3LH52-1", "sequence": { "sequence": "MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTTEEKPSPRRSLSQPSPPQRTPPALPGGEVSGKGPAVAAREARDAPPDAGASPAPGRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEWPKTMTGLPSTSGTTASVVIIRGLKMYVAHVGDSGVVLGIQDDPKDDFIRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAVSMCQDQEEKKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPGVDSKGNFANEDELYLNLTDSPSYNSQETCVITPSPCSTPPVKSLEEDPWPRLNSKDHISALVRSSAFSENYLEVPTEMARGNIQPAVISSKDPEPLEENCTKALTLRIHDSLNNSLSVGLVPTNSTNSVMDQKNLKMSTPGQMKAQEVERTPPANFKRTLEESNSGPLMKKHRRNGLSRNSGAQPASLPTTSQRKNSVKLTMRRRLRGQKKIGNPLLHQHRKTVCVC", "length": 605, "header": "tr|I3LH52-1|I3LH52_PIG Isoform 1 of Protein phosphatase, Mg2+/Mn2+ dependent 1D OS=Sus scrofa OX=9823 GN=PPM1D PE=3 SV=4 CANONICAL=I3LH52-1" }, "locus": { "chromosome": "12", "start_pos": 37535938, "end_pos": 37486558, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025171.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025171.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023397.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023397.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F867", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F867" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525714", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525714", "resource": "KEGG Pathway" }, { "id": "R-SSC-8878166", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8878166", "resource": "Reactome", "description": "Transcriptional regulation by RUNX2" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5NXQ2-1", "protein_name": "Protein phosphatase, Mg2+/Mn2+ dependent 1D", "gene_name": "PPM1D", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEGPYSLGVSVYSDQGGRKYMEDVTQIVVEPEPPAAAERGPAHKGGAAPGDGVRRRAGGPRAAEEGALPPGPGCGSGRRPRRSVAFFAVCDGHGGREAAQFARENLWGFIKKQKGFGSAEPAAVCAALRKGFIACHRAMWKKLPEWPKTMTGLPSTSGTTASVVIIRGSKMYVAHVGDSGVVLGVQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVINKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFYSGEFVVSPEPDTSVHTIDPQKHKYIILGSDGLWNMIPPQDAISMCQDHEEKKYFMGEHRQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPLQDSKNNLENEEELYLNLADSPCYSSPDTNIMTPSRCCTPPVKLLEDDPWPRLNASEPVPSLMHSNVISEKYAELPNEIAKSNLPSSGATLKDSGPQDEKCSKALALRIQESYSNGLSVSLSPSNSTISGTDQKGLKVSPNGQTKAQDAERTPTANFKRTLEESNSGPAVKKPRRGLSRSMGVQAEGISTTPQRKNSNKLAMRRSLRGQKKLSSSLFHPPRKAVCVC", "length": 590 }, "evidence": [ { "id": "I3LH52", "url": "https://omabrowser.org/oma/group/I3LH52/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B1WCA0-1", "protein_name": "Protein phosphatase, Mg2+/Mn2+ dependent, 1D", "gene_name": "Ppm1d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPAAEDKPAPVPRRALGLPATPSLVGVGPSGKGPAAARDPAPDAAASLPAGRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHSGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGKFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMVPPQDAISMCQDQEEKKYLMGEQGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPEVDNQGNFTNEDELFLNLTDSPTYNSQETCVMTPSPSSTPPVKSLEEDPWPRLNSKDHIPALVRSNAFSEKFLEVPAEIARGSIQTVVMTSKDSETLEENCPKALTLRIHDSLNNTLSVGLMPTNSTNTIMDQKNLKMSTPGQMKAQEVERTPPANFKRTLEESNSGPLMKKHRRNGLSRNSGAQASSLPTASQRRHSVTLTMRRRLRGQKKMGNPLLHQHRKTVCVC", "length": 598 }, "evidence": [ { "id": "I3LH52", "url": "https://omabrowser.org/oma/group/I3LH52/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BD03-1", "protein_name": "Protein phosphatase, Mg2+/Mn2+ dependent 1D", "gene_name": "PPM1D", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPAAEEELSSRRSPSRPPPPPRSPPPPAGGEVAGRGAAGAAREARAAPPDAGASPAPGRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQRGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEWPKTMTGLPSTSGTTASVVIIRGLKMYVAHVGDSGVVLGIQDDPKDDFIRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEEKKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPGVDSQGHFTSEDELYLNLTDSPSYNSQETCVMTPSPCSTPPVKPLEEDPWPRLNSKDHIPALIRSNAFSENYLEVPPEIARGNVQAAVISSKDPEPLEENCTKALTLRIHDSLNNSLSVGLVPTNSTNTITDQKNVKISSPGQMKAQEVERTPPANFKRTLEESNSGPLMKKHRRNGLSRSSGAQPASLPTTSQRKNSVKLTVRRRLRGQKKIGNPLLHQHRKTVCVC", "length": 605 }, "evidence": [ { "id": "I3LH52", "url": "https://omabrowser.org/oma/group/I3LH52/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O15297-1", "protein_name": "Protein phosphatase 1D", "gene_name": "PPM1D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTAEEKPSPRRSLSQPLPPRPSPAALPGGEVSGKGPAVAAREARDPLPDAGASPAPSRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEEKKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPEVDNQGNFTNEDELYLNLTDSPSYNSQETCVMTPSPCSTPPVKSLEEDPWPRVNSKDHIPALVRSNAFSENFLEVSAEIARENVQGVVIPSKDPEPLEENCAKALTLRIHDSLNNSLPIGLVPTNSTNTVMDQKNLKMSTPGQMKAQEIERTPPTNFKRTLEESNSGPLMKKHRRNGLSRSSGAQPASLPTTSQRKNSVKLTMRRRLRGQKKIGNPLLHQHRKTVCVC", "length": 605 }, "evidence": [ { "id": "I3LH52", "url": "https://omabrowser.org/oma/group/I3LH52/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QZ67-1", "protein_name": "Protein phosphatase 1D", "gene_name": "Ppm1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPAAEDKPAPVPRRALGLPATPTLAGVGPSEKGPAAARDPAPDAAASLPAGRCCRRRSSVAFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHSGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGKFVVSPEPDTSVHTLDPRKHKYIILGSDGLWNMVPPQDAISMCQDQEEKKYLMGEQGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPEVDNQGNFTNEDELFLNLTDSPTYNSQETCVMTSSPSSTPPIKSPEEDAWPRLSSKDHIPALVRSNAFSEKFLEVPAEIARGNIQTVVMTSKDSETLEENCPKALTLRIHDSLNNTLSVGLIPTNSTNTIMDQKNLKMSTPGQMKAQEVERTPPANFKRTLEESNSGPLMKKHRRNGLSRSSGAQASSLPTASQRRHSVKLTLRRRLRGQRKMGNPLLHQHRKTVCVC", "length": 598 }, "evidence": [ { "id": "I3LH52", "url": "https://omabrowser.org/oma/group/I3LH52/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" }, { "name": "phosphoprotein phosphatase activity", "id": "GO:0004721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004721", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" }, { "name": "mitogen-activated protein kinase binding", "id": "GO:0051019", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051019", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" }, { "name": "protein serine/threonine phosphatase activity", "id": "GO:0004722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004722", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of intracellular signal transduction", "id": "GO:1902531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902531", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" }, { "name": "DNA methylation-dependent constitutive heterochromatin formation", "id": "GO:0006346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006346", "evidence": [ { "database": "UniProtKB", "id": "I3LH52", "url": "https://www.uniprot.org/uniprotkb/I3LH52" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 237, "end_pos": 239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 367, "end_pos": 369, "annotation": "n_glycosylation_sequon" }, { "start_pos": 394, "end_pos": 396, "annotation": "n_glycosylation_sequon" }, { "start_pos": 477, "end_pos": 479, "annotation": "n_glycosylation_sequon" }, { "start_pos": 491, "end_pos": 493, "annotation": "n_glycosylation_sequon" }, { "start_pos": 502, "end_pos": 504, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LH52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH52" }, { "id": "PS51746", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51746" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPM-type phosphatase", "eco_id": "ECO_0000259", "start_pos": 81, "end_pos": 375, "start_aa": "Asp", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 237, "end_pos": 239 }, { "start_pos": 367, "end_pos": 369 }, { "start_pos": 394, "end_pos": 396 }, { "start_pos": 477, "end_pos": 479 }, { "start_pos": 491, "end_pos": 493 }, { "start_pos": 502, "end_pos": 504 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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] } ], "protein_names": [ { "name": "FA complementation group A", "type": "synonym", "evidence": [ { "id": "I3LKC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKC7/entry#names_and_taxonomy" } ] }, { "name": "Fanconi anemia group A protein isoform X4", "type": "synonym", "evidence": [ { "id": "XP_005653286", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653286" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LKC7", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FANCA", "url": "https://www.uniprot.org/uniprotkb/I3LKC7", "locus": { "chromosome": "6", "start_pos": 300152, "end_pos": 253207, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024687", "url": "https://www.ensembl.org/id/ENSSSCG00000024687" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024687", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024687", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100621453", "url": "https://www.ncbi.nlm.nih.gov/gene/100621453", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031729", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031729", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055277", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055277", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055386", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055386", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055387", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055387", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621453", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621453", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AIPHCPA", "url": "https://omabrowser.org/oma/group/AIPHCPA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12047", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12047", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12047:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12047:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03511", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03511", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15865", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15865", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24781", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24781", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24783", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24783", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6783310", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6783310", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9833482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005653286", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653286", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4F9S6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9S6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9S6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9S6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKC7", "url": "https://www.uniprot.org/uniprotkb/I3LKC7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKC7-1", "url": "https://www.uniprot.org/uniprotkb/I3LKC7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRQRGPDAASGRGVWAFGMSASGARGAFPDSGSGRCKRAWTELLAGRVKRQKLGPDGEQKVRESAVRLLRSHLNLSDLFLEVEGPQFAEPRLHRWIEWGGPEADARLSSSFVGSALQDQASRLGVPVAVLSSRVVASALARICASDARPSPQMLLTPEQRKKLSSVLGTARDLIAHGMFSRRCFCGEVWKVQNSLLLEAVWHLHVQNIVSLQELLESHADVQAAGTWLSRSLYHLCEQMEASSPHTDVARAVLTGFVQMFVLRGFPKNVDPRSTVEPEPVTQIAADVLQRMLTSALEALAAGLQEASAAYKAVRCWFGTFGRHTYQSIISTESPKRFFCHTLTQILTHRPVLKVSDALQMQREWCFARTHPLLSDLYRKLFVVLSPEELVARLQEVLETQEVNWQHVLSCVSALVICLPDAQPLVNGWVARLLARAFESCDLDSMVSAFLVVRQAAQEGPAAFPPYADWFQASFGSARYHGCSKKALVFLFKFLSDLVPFEAPQYLKVHMLHPPLVPSKHRTLLSDYVALARTRLADLKVSVETMGLYEDVSAAGDMAEPHSQASRDVEKAVSVFQHTGKVPVAVMEASVFRRPYYLSHFLPALLTPRVLPTVEDARAALIEALRRADKIPPSLYSAYRQACSTAGEKQPEAPGSEAEHSCAEEPLDLLTAALGELRASLSDPTQQDVLSARMAVVSDRLGPALGLSKDDEDGSSVATVQLSVRTPELPPRELKVVDLLLTAFSQNLLAASCLAPPDRQGPWAARLVRTLCGHGLLPAVLTRLCQLLRHQGPSLSASHVLGLAALAVHLGEAASTLPAVCAGPPGPARPLPVPELFDCLLPCGTPEAWALCLRFCTAAISYSVCKFSSQSRGVLRSCLSPGLIKKFQFLVLRLFPEARDAPAGAEDAAGPGWQPLCLPSVDWQRAALCLWEQGAFRELLEQDGLRLTYRDWLLLELEIQPEVDALSDTERWAFQQWAIHEHFLPAPASAGGCAGDLEAACTVLADVLMDFWQRSRSDGHSDNSHLAVSGYTGNRDIFSRLQELAGDLQQGPEAPLGPSPARGHFLFGLFRRRLRALARGQDVATRLQRQQELLMFRRVLLGLPPTVLVGSPQAGPPAALACEDFFHLVNTELRDFSQDGALSHDITLHFFRGLLDACSRSSDPSLAADLTLTACGTQCPLLLTSALLWWPRLEPELRRRWTRCSRGPLPSELQRLQEARHFARSVLGPLEAPPAPGPAWLCAAALHLELRQAGKAGLRSELARLPCPGDELLLFLFFFSLMGLLASHVTPHAAGSPEALAVCTEILGCLQRRRVSWLPLFQLTEAGAGLGHTLLRLAPDHLLRLLPVAFYSLLSSFEEDAPLQQEAFLHVAVDMYLQLVRLFMDGGTSAVSTRAHSGELRGQGDPVSLITKARLFLLQLIPRCPARSFACVTELLAAPGACDPEVRAALLRRQPAGLDPDLRQEPCLFGPDLHGV", 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"length": 1323, "header": "tr|A0A8W4F9S6-1|I3LKC7_PIG Computationally mapped isoform of FA complementation group A OS=Sus scrofa OX=9823 GN=FANCA PE=4 SV=1 CANONICAL=I3LKC7-1" }, "locus": { "chromosome": "6", "start_pos": 300068, "end_pos": 260768, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099759.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099759.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075042.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075042.1" } ] } }, { "isoform_ac": "I3LKC7-1", "url": "https://www.uniprot.org/uniprotkb/I3LKC7/entry#I3LKC7-1", "sequence": { "sequence": "MGRQRGPDAASGRGVWAFGMSASGARGAFPDSGSGRCKRAWTELLAGRVKRQKLGPDGEQKVRESAVRLLRSHLNLSDLFLEVEGPQFAEPRLHRWIEWGGPEADARLSSSFVGSALQDQASRLGVPVAVLSSRVVASALARICASDARPSPQMLLTPEQRKKLSSVLGTARDLIAHGMFSRRCFCGEVWKVQNSLLLEAVWHLHVQNIVSLQELLESHADVQAAGTWLSRSLYHLCEQMEASSPHTDVARAVLTGFVQMFVLRGFPKNVDPRSTVEPEPVTQIAADVLQRMLTSALEALAAGLQEASAAYKAVRCWFGTFGRHTYQSIISTESPKRFFCHTLTQILTHRPVLKVSDALQMQREWCFARTHPLLSDLYRKLFVVLSPEELVARLQEVLETQEVNWQHVLSCVSALVICLPDAQPLVNGWVARLLARAFESCDLDSMVSAFLVVRQAAQEGPAAFPPYADWFQASFGSARYHGCSKKALVFLFKFLSDLVPFEAPQYLKVHMLHPPLVPSKHRTLLSDYVALARTRLADLKVSVETMGLYEDVSAAGDMAEPHSQASRDVEKAVSVFQHTGKVPVAVMEASVFRRPYYLSHFLPALLTPRVLPTVEDARAALIEALRRADKIPPSLYSAYRQACSTAGEKQPEAPGSEAEHSCAEEPLDLLTAALGELRASLSDPTQQDVLSARMAVVSDRLGPALGLSKDDEDGSSVATVQLSVRTPELPPRELKVVDLLLTAFSQNLLAASCLAPPDRQGPWAARLVRTLCGHGLLPAVLTRLCQLLRHQGPSLSASHVLGLAALAVHLGEAASTLPAVCAGPPGPARPLPVPELFDCLLPCGTPEAWALCLRFCTAAISYSVCKFSSQSRGVLRSCLSPGLIKKFQFLVLRLFPEARDAPAGAEDAAGPGWQPLCLPSVDWQRAALCLWEQGAFRELLEQDGLRLTYRDWLLLELEIQPEVDALSDTERWAFQQWAIHEHFLPAPASAGGCAGDLEAACTVLADVLMDFWQRSRSDGHSDNSHLAVSGYTGNRDIFSRLQELAGDLQQGPEAPLGPSPARGHFLFGLFRRRLRALARGQDVATRLQRQQELLMFRRVLLGLPPTVLVGSPQAGPPAALACEDFFHLVNTELRDFSQDGALSHDITLHFFRGLLDACSRSSDPSLAADLTLTACGTQCPLLLTSALLWWPRLEPELRRRWTRCSRGPLPSELQRLQEARHFARSVLGPLEAPPAPGPAWLCAAALHLELRQAGKAGLRSELARLPCPGDELLLFLFFFSLMGLLASHVTPHAAGSPEALAVCTEILGCLQRRRVSWLPLFQLTEAGAGLGHTLLRLAPDHLLRLLPVAFYSLLSSFEEDAPLQQEAFLHVAVDMYLQLVRLFMDGGTSAVSTRAHSGELRGQGDPVSLITKARLFLLQLIPRCPARSFACVTELLAAPGACDPEVRAALLRRQPAGLDPDLRQEPCLFGPDLHGV", "length": 1476, "header": "tr|I3LKC7-1|I3LKC7_PIG Isoform 1 of FA complementation group A OS=Sus scrofa OX=9823 GN=FANCA PE=4 SV=4 CANONICAL=I3LKC7-1" }, "locus": { "chromosome": "6", "start_pos": 300068, "end_pos": 253209, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031647.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031647.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024541.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024541.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4F9S6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9S6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621453", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621453", "resource": "KEGG Pathway" }, { "id": "R-SSC-6783310", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6783310", "resource": "Reactome", "description": "Fanconi Anemia Pathway" }, { "id": "R-SSC-9833482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "resource": "Reactome", "description": "PKR-mediated signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AGX8-1", "protein_name": "FA complementation group A", "gene_name": "Fanca", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPGSPARGAAVGGGPRVLRKTWTELLAGRVKKQKYDPEREQKLKDSALKLLRYHQNMHDLLLEAEVPQCKKLRLSELIDCGGAEASSDPSTPFIRSAFRDQASRLGVPVGVLSARVFAHSVQQVCVEPSHPVLLSPEQSERLSSLLVSAQRLLAHNMFSRLTFCQELWKAQNSLLLEAVWRLHTHHVVSLQELLQSHPDTEAMTTWLFRNLRFLCELIGASCPSSDTVEAMLSGLVQLLISWGFQGSSDPRRLLESEKIEKMPQEVRKLPRVAADVLQRMLAFSLDTLDADSQTTLDHQAVSGWITVYSGRTCCGMIAADSLKSFLSHALTQILTHKPVLKVSDAIQMQKEWSFAKTPHLLIDLYCRVFVTLGPEESIGHLQEVLELQEVNWQHVLSCVSTLVVCFSEAQQLIKDWVASLMARAFESYHLDSMVTAFLIVRQATLEGPYVFPSYADWFKESFGSSHGYHSCSKKTLVFLFKFLSDLVPWEAPRHMQVHIFHPPLVPSKYHSLLTDYISLAKTRLADLKVSLENVGLYEDLSSTGDIAERESQAVQDVKKAIMVFEQTGKIPMPVLEASIFRRPYYLSHFLPALLAPRVLPEVPDSRVAFIETLKRADKIPPSSYSAYRQACATAGDKQPDNTTSGQRTETNCAERPLGLLTAALEELRALMTDPTQYSVISAQVAVVSERLNAALGHRNDDDVSLRRSKIQLSVLLPTLQSQDQGVVDLLLTAFCQNLMAACSFVPPERQSSWAVLFVRTLCGHMLLPAVLTRLCQLLRHQGPNLSAPHVLGLAALAVHLGECRSTLPEVDPGVLAPPSSLCVPDFLNSLLTCHTRDSLLFCMKFCTAAISYCLCKFSAQPSASLHNCLSPGLIQKFQFIVLRLFPEARAPCSPEHTARIPWKLLYLPSADWPRAALSLWRWSSFQELLKEEEFHLTYRDWIQLELEIQPEADALSGTERHDFHQWAIYERYLPAPSAMGGCGGDLEAACTVLVSELMDFHQRSYNHSEDSDLVLGGRTGNEDLLSRLQEMAMDLELDQGSAVPRGCSTPESHFLFRVFRGRLQALARPGSMATSLRRQQELLICKRLLLRLPPSVLVGSPQAGQPVSPNCEEFFNLVTSGLRNICCHGSVLTYDLTIHFFRGLLNVCLRSQDPALVANRTLAECQTKCPMILTSALLWWSSLEPVLCSQWKKCYQSTLPQELQRLQEARKFASNFASDSAAPAPSPAWISAAALYFATREAGRENVTTHLKRLDCEREELLITLLFFSLMGLLSSYLTQRDTAEYQKAVDICAEVLACLERRKVSWLMLFQLAETDAKLGHLLLLAPDQHTRLLPLAFYSLLSCFSDGTTVREAAFLHVAVDMYLKLVQLFVDGETRIVLPQASRSISELQDSPVQLITKARSFLLQLIPQCPRQCFSNMTELLAGRGDCDPEVSNALQQRQQAGPSFDLSQEPHLF", "length": 1458 }, "evidence": [ { "id": "I3LKC7", "url": "https://omabrowser.org/oma/group/I3LKC7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AAA9TBU1-1", "protein_name": "FA complementation group A", "gene_name": "FANCA", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSAPGARVAASDQGPGVRRRAWAELLEGRVERQKLSPEGEQKVRESAVRLLRSHLNLNDLILEVEGPPCDQPCLRQLIDCDGPEAHTNLSSSLIGSALRDQATRLGVPVAVLSSQVVASGLMRICEADTRPPPKVLLTPEQRKKLSSLLEIAQNLLAQNMFSRLYFCQELWKAQNSLLLEAVWRLHVQNVVSIPELLESRADTQAVVVWLCKDLGLLCEQIEVPCPHAEVARAVLADLVQMFVLRGFQKSDGVRGDGAPAQMAQIAAAVLEQMLASTLEAMAAGLPEGSPAYKAGSCWFSVFSGPMYQSILSAETLKRWFCHTLTQILTHKPVLKVSDAVQMQREWSFARTPALLSGLYRRLFVILSPEELVGHLQDVLETQEVNWRHVLSCVSTLVICLPDAQQLVNGWVTRLLARAFESWDLDSMVLAFLVVRQAALEGPAVFPSYATWFQATFGSTRGIHSCSKKALVFLFKFLSDLVPFEVPRYLQVHILHPPLVPGKYRTLLTDYVVLAKTRLADLKISIENMGLYEDLSSAGDVTQPQSQASQDVEKALSVFEHTGKVPVAILEASIFRRSYYLSHFLPALLTPRVLPRAPDSREALIESLRRADKIPPALYSAYRQACSTAGQKQPEDAAQGGEVEPSCAEEPLDLLMAALQELRASMTDPTQHDELSAQVAMVSERLHSVLGLSEDVSSDEAAPVQLSVQAPKLQPLEQRVVDLLLTSFCQNLMAASSVAPPDRQGPWATHFVRALCGHRFLPAVLTRLCQLLHHQGPSLSASHVLGLAALAVHLGESRSELPKVHVGPPAPARGLPIPEFIDSLLPCTAQQASALCLKFSTAAISYSLCKFSQSHELLHSCLSPGLIKKFQFLMFRWFPEARDPPSQEDPASLPWRPLCLPSVDWRRAALCLWKQRALKELLKQEGLQLTYRDWLQLEIEIQPEVDSLSDTERQDFQQWAIHQHFLPMPSATGGCDGDLEAACTTLVDVLMDFCQSSRSHHHSENSDLVLSGCKGNRDIFSRLQEMAADLEQGPAPLGHAAPHGHFLFGVFRRRLQALTHGWDMASRLQRQRELLTCKRTLLGLPPSMLVSSPRAEQPAAPSCTDFFHLVNSELRNFSHDGALTHDITAHFFRGLLNTCARSRDPSLAADLALTACQTQCPLLLTSALLWWSSLEPELHCRWRRWSQSPLPAELRKLQEAHLFAESVSSPLTPSPAPGPSWLCAAALHFAIQRARKESFRQELGKLDGQGEELFVSLFFFSLMGLLSSYLTPQAIGSLRALDICADILGCLQRRRISWLLVFQLTEADVPLGRTLLGLAPDHQVRLLPVAFYSLLPYFDEDALLTEDAFLHVALNMYLKLVGLFVAGETGAIWTVAHDGELPTQGDPVSLITNARLFLLQLIPRCPERSFLHVAELLAESGDCDPEVSAALLSRRQAVLDPDLSQEPQLF", "length": 1449 }, "evidence": [ { "id": "I3LKC7", "url": "https://omabrowser.org/oma/group/I3LKC7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O15360-1", "protein_name": "Fanconi anemia group A protein", "gene_name": "FANCA", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSDSWVPNSASGQDPGGRRRAWAELLAGRVKREKYNPERAQKLKESAVRLLRSHQDLNALLLEVEGPLCKKLSLSKVIDCDSSEAYANHSSSFIGSALQDQASRLGVPVGILSAGMVASSVGQICTAPAETSHPVLLTVEQRKKLSSLLEFAQYLLAHSMFSRLSFCQELWKIQSSLLLEAVWHLHVQGIVSLQELLESHPDMHAVGSWLFRNLCCLCEQMEASCQHADVARAMLSDFVQMFVLRGFQKNSDLRRTVEPEKMPQVTVDVLQRMLIFALDALAAGVQEESSTHKIVRCWFGVFSGHTLGSVISTDPLKRFFSHTLTQILTHSPVLKASDAVQMQREWSFARTHPLLTSLYRRLFVMLSAEELVGHLQEVLETQEVHWQRVLSFVSALVVCFPEAQQLLEDWVARLMAQAFESCQLDSMVTAFLVVRQAALEGPSAFLSYADWFKASFGSTRGYHGCSKKALVFLFTFLSELVPFESPRYLQVHILHPPLVPGKYRSLLTDYISLAKTRLADLKVSIENMGLYEDLSSAGDITEPHSQALQDVEKAIMVFEHTGNIPVTVMEASIFRRPYYVSHFLPALLTPRVLPKVPDSRVAFIESLKRADKIPPSLYSTYCQACSAAEEKPEDAALGVRAEPNSAEEPLGQLTAALGELRASMTDPSQRDVISAQVAVISERLRAVLGHNEDDSSVEISKIQLSINTPRLEPREHMAVDLLLTSFCQNLMAASSVAPPERQGPWAALFVRTMCGRVLPAVLTRLCQLLRHQGPSLSAPHVLGLAALAVHLGESRSALPEVDVGPPAPGAGLPVPALFDSLLTCRTRDSLFFCLKFCTAAISYSLCKFSSQSRDTLCSCLSPGLIKKFQFLMFRLFSEARQPLSEEDVASLSWRPLHLPSADWQRAALSLWTHRTFREVLKEEDVHLTYQDWLHLELEIQPEADALSDTERQDFHQWAIHEHFLPESSASGGCDGDLQAACTILVNALMDFHQSSRSYDHSENSDLVFGGRTGNEDIISRLQEMVADLELQQDLIVPLGHTPSQEHFLFEIFRRRLQALTSGWSVAASLQRQRELLMYKRILLRLPSSVLCGSSFQAEQPITARCEQFFHLVNSEMRNFCSHGGALTQDITAHFFRGLLNACLRSRDPSLMVDFILAKCQTKCPLILTSALVWWPSLEPVLLCRWRRHCQSPLPRELQKLQEGRQFASDFLSPEAASPAPNPDWLSAAALHFAIQQVREENIRKQLKKLDCEREELLVFLFFFSLMGLLSSHLTSNSTTDLPKAFHVCAAILECLEKRKISWLALFQLTESDLRLGRLLLRVAPDQHTRLLPFAFYSLLSYFHEDAAIREEAFLHVAVDMYLKLVQLFVAGDTSTVSPPAGRSLELKGQGNPVELITKARLFLLQLIPRCPKKSFSHVAELLADRGDCDPEVSAALQSRQQAAPDADLSQEPHLF", "length": 1455 }, "evidence": [ { "id": "I3LKC7", "url": "https://omabrowser.org/oma/group/I3LKC7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JL70-1", "protein_name": "Fanconi anemia group A protein homolog", "gene_name": "Fanca", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPGSPARGAAMGGGPRGLRKTWTELLAGRVKKQKYDPEREQKLKDSALKLLRYHQNMHDLLLEVEEPQCKRLRLSELIDRDSADASSDRSASFIRSAFRDQASRLGVPVGVLSAKVFARSVQQVCVEPSHPVLLSPEQSKKLSSLLMIARHLLAQNMFSRLTFCQELWKAQNSLLLEAMWRLHTHSVVSLQELLQSHPDSEAMAMWLFRNLRSLCEQIGASCPSPDTTEAMLSGLVQLLISRGFQGSSDPRRLVEPERLPQVATDVLQRMLAFSLDTLEADPQTTLDCQAVSGWIPIYSGHTCCGVVTENSLKSFFSHTLTQILTHKPVLKVSDAIQMQKEWSFAKTHHLLTDLHCRVLATLGPEESVGRLQEVLEMQEVNWQHVLSCVSTLVVCFPEAQQLVKGWVASLMARAFESYHLDSMVTAFLIVRQATLEGPYVFPSYADWFKESFGSSHGYHSCSKKTLVFLFKFLSDLVPWEAPRYMQVHIFHPPLVPSKYHSLLTDYISLAKTRLADLKVSLENVGLYEDLSSPGDIAERESQAVQDVKKAIMVFEQTGKIPMPVLEASIFRRPYYVSHFLPTLLAPRVLPEVPDPRVALIETLKRADKIPSSIYDAYRKACASAEKQQPENATSAQRTEADCAKEPLGLLTAALEELRALMTDPTQYSVISAQVAVVSEKLNAVLGHRNDGGSLQRAKIQLSVLPSTLQKQDQAVVDLLLTAFCQNLMAASSFVPPERQSPWAVLFVRTLCGHVLLPAVLTRLRQLLRHQGQSLSTSHVLGLAALAVHLGECRSMLPEVDPDVLAPSAGSLCVPDFLNSLLTCRTRDSLLFCMNFCTAAVSYCLCKFSALRNCLSPGLIKKFQFVVLRLFPEARAPCAPEHAACVPWRPLYLPSADWQRAALSLWRRDSFQELLKDKEFYLTYRDWVQLELEIQPEADVLSDMERHDFHQWAIYERYLPAPTALGGCGGDLEEACTVLVSEIMDFHQSSRSYNHSEDSDLVLGGRTGNKDILSRLQEIALDLELDQGSAVPHGCSTPQSHFLFRVFRRRLQALARPDSMATSLRRQQELLTCKRLLLCLPPSVLVGGPQAGQPISPNCGEFFSLVNSELRNFCCHGSVLTSDITIHFFRGLLRVCLRSQDPALVANQTLTECQTKCPVILTSALLWWSSLEPVLCGRWMRCYQSPLPRELRRLQEAREFASNFASASASPAPSPAWIAAAALHFAWRGVRKEDVTAHLQRLDCQREELLIALFFFSLMGLLSSYLTQRDTAEHLKAVDICAEVLTCLERRKVSWLVLFQLTEKDAKLGHLLHLAPDQHTRLLPLAFYSLLSCFSEGAAVREAAFLHVAVDMYLKLLQLFVDGETRLQGHSESQGSPVQLITKARVFLLQLIPQCPKQCFSNMTELLAGRGDCDPEVSNALRQRQQADPSFDLYQEPQLF", "length": 1439 }, "evidence": [ { "id": "I3LKC7", "url": "https://omabrowser.org/oma/group/I3LKC7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Fanconi anaemia nuclear complex", "id": "GO:0043240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043240", "evidence": [ { "database": "UniProtKB", "id": "I3LKC7", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LKC7", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "I3LKC7", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "interstrand cross-link repair", "id": "GO:0036297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036297", "evidence": [ { "database": "UniProtKB", "id": "I3LKC7", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" } ], "pmid": "" }, { "name": "regulation of regulatory T cell differentiation", "id": "GO:0045589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045589", "evidence": [ { "database": "UniProtKB", "id": "I3LKC7", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 75, "end_pos": 77, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LKC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" }, { "id": "PF03511", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03511" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fanconi anaemia group A protein C-terminal", "eco_id": "ECO_0000259", "start_pos": 1241, "end_pos": 1445, "start_aa": "Leu", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LKC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" }, { "id": "PF15865", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15865" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fanconi anaemia group A protein N-terminal", "eco_id": "ECO_0000259", "start_pos": 189, "end_pos": 542, "start_aa": "Val", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LKC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" }, { "id": "PF24783", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24783" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fanconi anaemia group A protein arcN subdomain", "eco_id": "ECO_0000259", "start_pos": 665, "end_pos": 899, "start_aa": "Glu", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LKC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKC7" }, { "id": "PF24781", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24781" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fanconi anaemia group A protein helical", "eco_id": "ECO_0000259", "start_pos": 562, "end_pos": 643, "start_aa": "His", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 75, "end_pos": 77 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LAV9-1", "uniprot_ac": "I3LAV9", "uniprot_id": "I3LAV9_PIG", "mass": { "chemical_mass": 66313.0, "monoisotopic_mass": 66313.0 }, "refseq": { "ac": "XP_001929153", "name": "TOX high mobility group box family member 4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929153" }, "gene_names": [ { "name": "TOX4", "type": "recommended", "evidence": [ { "id": "I3LAV9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" } ] }, { "name": "TOX4", "type": "synonym", "evidence": [ { "id": "XP_001929153", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929153" } ] } ], "protein_names": [ { "name": "TOX high mobility group box family member 4", "type": "recommended", "evidence": [ { "id": "I3LAV9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAV9/entry#names_and_taxonomy" } ] }, { "name": "TOX high mobility group box family member 4", "type": "synonym", "evidence": [ { "id": "XP_001929153", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929153" } ] } ], "function": [ { "annotation": "Transcription factor that modulates cell fate reprogramming from the somatic state to the pluripotent and neuronal fate. In liver, controls the expression of hormone-regulated gluconeogenic genes such as G6PC1 and PCK1. This regulation is independent of the insulin receptor activation. Also acts as a regulatory component of protein phosphatase 1 (PP1) complexes. Component of the PNUTS-PP1 protein phosphatase complex, a PP1 complex that regulates RNA polymerase II transcription pause-release. PNUTS-PP1 also plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.", "evidence": [ { "database": "UniProtKB", "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9#function" }, { "database": "UniProtKB", "id": "ARBA00093329", "url": "https://www.uniprot.org/uniprotkb/ARBA00093329#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TOX4", "url": "https://www.uniprot.org/uniprotkb/I3LAV9", "locus": { "chromosome": "7", "start_pos": 77678475, "end_pos": 77698917, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029203", "url": "https://www.ensembl.org/id/ENSSSCG00000029203" } ] } } ], "crossref": [ { "id": "ENSSSCG00000029203", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029203", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21995", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21995", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100152681", "url": "https://www.ncbi.nlm.nih.gov/gene/100152681", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036910", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036910", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152681", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152681", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FLSGAEX", "url": "https://omabrowser.org/oma/group/FLSGAEX/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LAV9", "url": "https://www.orthodb.org/?gene=I3LAV9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45781", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45781", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45781:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45781:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00505", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00505", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001929153", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929153", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FBS5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FBS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBS5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAV9-1", "url": "https://www.uniprot.org/uniprotkb/I3LAV9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEFPGGSDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEEFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPAPPSQTPSPPPVATTADPASPAPATTEPPALSPSIVVNSTLSSYVTNQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKFRINLQQQPPPLQVKIVPPPTLKMQTTLVPPPVENSPEQPMNSSPEAHTVEETSPETICEMITDVVPEVESPPQMDVELVDESPVTLSPQPRCVRSGCENPPVVSKDWDNEYCSNECVVKHCRDVFLAWVASRNSNTVVFVK", "length": 620, "header": "tr|I3LAV9-1|I3LAV9_PIG Isoform 1 of TOX high mobility group box family member 4 OS=Sus scrofa OX=9823 GN=TOX4 PE=4 SV=1 CANONICAL=I3LAV9-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FBS5-1", "url": "https://www.uniprot.org/uniprotkb/I3LAV9/entry#A0A8W4FBS5-1", "sequence": { "sequence": "MEFPGGSDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMPVGMTHEPPALSPSIVVNSTLSSYVTNQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKFRINLQQQPPPLQVKIVPPPTLKMQTTLVPPPVENSPEQPMNSSPEAHTVEETSPETICEMITDVVPEVESPPQMDVELVDESPVTLSPQPRCVRSGCENPPVVSKDWDNEYCSNECVVKHCRDVFLAWVASRNSNTVVFVK", "length": 377, "header": "tr|A0A8W4FBS5-1|I3LAV9_PIG Computationally mapped isoform of TOX high mobility group box family member 4 OS=Sus scrofa OX=9823 GN=TOX4 PE=4 SV=1 CANONICAL=I3LAV9-1" }, "locus": { "chromosome": "7", "start_pos": 77698832, "end_pos": 77680631, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100893.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100893.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076717.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076717.1" } ] } }, { "isoform_ac": "I3LAV9-1", "url": "https://www.uniprot.org/uniprotkb/I3LAV9/entry#I3LAV9-1", "sequence": { "sequence": "MEFPGGSDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEEFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPAPPSQTPSPPPVATTADPASPAPATTEPPALSPSIVVNSTLSSYVTNQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKFRINLQQQPPPLQVKIVPPPTLKMQTTLVPPPVENSPEQPMNSSPEAHTVEETSPETICEMITDVVPEVESPPQMDVELVDESPVTLSPQPRCVRSGCENPPVVSKDWDNEYCSNECVVKHCRDVFLAWVASRNSNTVVFVK", "length": 620, "header": "tr|I3LAV9-1|I3LAV9_PIG Isoform 1 of TOX high mobility group box family member 4 OS=Sus scrofa OX=9823 GN=TOX4 PE=4 SV=1 CANONICAL=I3LAV9-1" }, "locus": { "chromosome": "7", "start_pos": 77698832, "end_pos": 77680631, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027379.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027379.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021177.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021177.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 180, "start_aa": "Thr", "end_pos": 180, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr180", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FBS5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FBS5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152681", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152681", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7HE97-1", "protein_name": "TOX high mobility group box family member 4", "gene_name": "Tox4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEFPGGNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQDGSFAAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGSTILPPAQSPEDRLSTTPSPTNSLHEDGVDDFRRVRQLPSQKTVVVETGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPVPQSQTPSPPPVTTADPASPAPASTESPALSPCIVVNSTLSSYVANQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKVRINLQQQPPPLQSKVVPPPTLKMQTALIPPAVESSPEQPLNCSPEAHTAEATSPETICEMITDVVPEVESPSQMDVELVSGSPVTLSPQPRCVRSGCENPPVISKDWDNEYCSNECVVKHCRDVFLAWVASRNPNSVVFVK", "length": 621 }, "evidence": [ { "id": "I3LAV9", "url": "https://omabrowser.org/oma/group/I3LAV9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O94842-1", "protein_name": "TOX high mobility group box family member 4", "gene_name": "TOX4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEFPGGNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEDFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPAPPSQTPSPPPMATVDPASPAPASIEPPALSPSIVVNSTLSSYVANQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIVTRSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKVRINLQQQPPPLQIKSVPLPTLKMQTTLVPPTVESSPERPMNNSPEAHTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKDWDNEYCSNECVVKHCRDVFLAWVASRNSNTVVFVK", "length": 621 }, "evidence": [ { "id": "I3LAV9", "url": "https://omabrowser.org/oma/group/I3LAV9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0P5K4-1", "protein_name": "TOX high mobility group box family member 4", "gene_name": "TOX4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEFPGGNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEEFRRQPPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVDMDPAPPSQTPSPPPVAAADPASPAPASTEPPALSPSIVVNSTLSSYVANQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKFRINLQQQPPPLQVKIVPPPTLKMQTTLVPPPVESSPEQPVNNSPETHTVEETTPETICEMITDVVPEVESPSQMDVELVSGSPMTLSPQPRCVRSGCENPPVVSKDWDNEYCSNECVVKHCRDVFLAWVASRNSNTVVFVK", "length": 619 }, "evidence": [ { "id": "I3LAV9", "url": "https://omabrowser.org/oma/group/I3LAV9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8BU11-1", "protein_name": "TOX high mobility group box family member 4", "gene_name": "Tox4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEFPGGNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTNSLHEDGVDDFRRQLPAQKTVVVETGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPVPQSQTPSPPPVTAADPASPAPASTESPALPPCIIVNSTLSSYVANQASSGPGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQVGQTSTATIQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKVRINLQQQPPPLQSKIVPPPTLKIQTTVVPPTVESSPEQPMNSSPEAHTVEATSPETICEMIADVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPVVSKDWDNEYCSNECVVKHCRDVFLAWVASRNPNSVVFVK", "length": 619 }, "evidence": [ { "id": "I3LAV9", "url": "https://omabrowser.org/oma/group/I3LAV9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3LAV9", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 247, "end_pos": 249, "annotation": "n_glycosylation_sequon" }, { "start_pos": 345, "end_pos": 347, "annotation": "n_glycosylation_sequon" }, { "start_pos": 365, "end_pos": 367, "annotation": "n_glycosylation_sequon" }, { "start_pos": 520, "end_pos": 522, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LAV9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAV9" }, { "id": "PS50118", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50118" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "HMG box", "eco_id": "ECO_0000259", "start_pos": 223, "end_pos": 291, "start_aa": "Pro", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 180 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 247, "end_pos": 249 }, { "start_pos": 345, "end_pos": 347 }, { "start_pos": 365, "end_pos": 367 }, { "start_pos": 520, "end_pos": 522 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"header": "tr|I3LLH3-1|I3LLH3_PIG Isoform 1 of Zinc finger protein 276 OS=Sus scrofa OX=9823 GN=ZNF276 PE=4 SV=2 CANONICAL=I3LLH3-1" }, "locus": { "chromosome": "6", "start_pos": 313274, "end_pos": 300380, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022755.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022755.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024942.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024942.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 280, "start_aa": "Thr", "end_pos": 280, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr280", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": 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"length": 1022, "header": "tr|I3LKY7-1|I3LKY7_PIG Isoform 1 of Rho guanine nucleotide exchange factor 10 OS=Sus scrofa OX=9823 GN=ARHGEF10 PE=4 SV=4 CANONICAL=I3LKY7-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FCH0-1", "url": "https://www.uniprot.org/uniprotkb/I3LKY7/entry#A0A8W4FCH0-1", "sequence": { "sequence": "MIETVYNDRGEIVKTKERRLLMLNDVLLCATVSTRTSHDSSAGVSTSQRYLLKWSVPLGHVEVIEYGGDEGVGENGRCPLVHVPESLAVVASAKPKCMGLGPGSA", "length": 105, "header": "tr|A0A8W4FCH0-1|I3LKY7_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 10 OS=Sus scrofa OX=9823 GN=ARHGEF10 PE=4 SV=1 CANONICAL=I3LKY7-1" }, "locus": { "chromosome": "15", "start_pos": 33431078, "end_pos": 33429993, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097995.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097995.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076553.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076553.1" } ] } }, { "isoform_ac": "I3LKY7-1", "url": "https://www.uniprot.org/uniprotkb/I3LKY7/entry#I3LKY7-1", "sequence": { "sequence": "MDQPGPATPASEENEVKCDANNNEEEEGEQLDLDSGDEIPEADRQAPGAPGAGDAGADTLGPATTAAPAPASATSTCTTHATTGSGVDGAGADTASPSEPPQLGAPARVSPYSVIDITPFQEDPPLPPTPDPGAEEEGATPHVPSGYLVPVPCGYAVPSNLPLLLPAYSSPVVTHVPTEPAETQEVAEDSQFNSLSSEDPTNSEDPALKEDSALARWAADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVDNGGEGGNSSLEYGWSSSEFESYEEQSDSESRNGVPRPFLRSNHKKQLSHDLARLKEHYERKMREVMASTVGAVEIQRLKHKHELKMQKLMKAAREGTKDGLEKTKAAVKRGRSFIRTKSFVSADHRSCLEEEQSLFIDVDCRHPEAVLTPMPDGLSQQQVVRRYILGSIVDSEKNYVDALKRILEQYEKPLSEMEPRVLSERKLRTVFYRVKEVLQCHCLFQIALASRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQESSPDRVTLYSLMMKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLVRSDDMIETVYNDRGEIVKTKERRLLMLNDVLLCATVSTRTSHDSSAGVSTSQRYLLKWSVPLGHVEVIEYGGDEGVGENGRCPLVHVPESLAVVASAKPNRVYMGPGQLYQDLQNLLHDLNVVGQITQLIGTLKGNYQNLNQSVAHDWTSGLQRLILKKEEEIRAADCCRIQLQLPGKQDRSGRPTVFTAVFNTFTPAIKESWTNNLQMAKRALEEDNHLGWFCVEDDGNQIKKERHPLLVGHMPVTVAKQQEFKIECAVYNPEPYLSHENQPDSSSTAHGFLWIGSCTSQMGQIAIVSFQNSHPKVIECFNVESRVLCMVYAPLRRGPGSLAPPSPRPRRVEYWVSLPSAWGRRREAFPFTRAAKAPRRCGCNTSSLLTSPQS", "length": 1022, "header": "tr|I3LKY7-1|I3LKY7_PIG Isoform 1 of Rho guanine nucleotide exchange factor 10 OS=Sus scrofa OX=9823 GN=ARHGEF10 PE=4 SV=4 CANONICAL=I3LKY7-1" }, "locus": { "chromosome": "15", "start_pos": 33446520, "end_pos": 33384261, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031893.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031893.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024752.4", "url": "https://www.ensembl.org/id/ENSSSCP00000024752.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 129, "start_aa": "Thr", "end_pos": 129, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr129", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 8, "start_aa": "Thr", "end_pos": 8, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr8", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FCH0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCH0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" }, { "name": "kinesin binding", "id": "GO:0019894", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019894", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "mitotic spindle assembly", "id": "GO:0090307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090307", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" }, { "name": "positive regulation of stress fiber assembly", "id": "GO:0051496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051496", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" }, { "name": "positive regulation of Rho protein signal transduction", "id": "GO:0035025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035025", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" }, { "name": "myelination in peripheral nervous system", "id": "GO:0022011", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022011", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" }, { "name": "centrosome duplication", "id": "GO:0051298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051298", "evidence": [ { "database": "UniProtKB", "id": "I3LKY7", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1012, "end_pos": 1014, "annotation": "n_glycosylation_sequon" }, { "start_pos": 263, "end_pos": 265, "annotation": "n_glycosylation_sequon" }, { "start_pos": 517, "end_pos": 519, "annotation": "n_glycosylation_sequon" }, { "start_pos": 779, "end_pos": 781, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LKY7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1022, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LKY7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LKY7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LKY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LKY7" }, { "id": "PS50010", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50010" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DH", "eco_id": "ECO_0000259", "start_pos": 417, "end_pos": 604, "start_aa": "Val", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 8, 129 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1012, "end_pos": 1014 }, { "start_pos": 263, "end_pos": 265 }, { "start_pos": 517, "end_pos": 519 }, { "start_pos": 779, "end_pos": 781 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LK73-1", "uniprot_ac": "I3LK73", "uniprot_id": "I3LK73_PIG", "mass": { "chemical_mass": 308156.0, "monoisotopic_mass": 308156.0 }, "refseq": {}, "gene_names": [ { "name": "OTOG", "type": "recommended", "evidence": [ { "id": "I3LK73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ] } ], "protein_names": [ { "name": "Otogelin", "type": "recommended", "evidence": [ { "id": "I3LK73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LK73/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Glycoprotein specific to acellular membranes of the inner ear. May be required for the anchoring of the otoconial membranes and cupulae to the underlying neuroepithelia in the vestibule. May be involved in the organization and/or stabilization of the fibrillar network that compose the tectorial membrane in the cochlea. May play a role in mechanotransduction processes.", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73#function" }, { "database": "UniProtKB", "id": "ARBA00057928", "url": "https://www.uniprot.org/uniprotkb/ARBA00057928#function" }, { "database": "UniProtKB", "id": "A0A8W4FF44", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF44#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OTOG", "url": "https://www.uniprot.org/uniprotkb/I3LK73", "locus": { "chromosome": "2", "start_pos": 41497200, "end_pos": 41584948, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013376", "url": "https://www.ensembl.org/id/ENSSSCG00000013376" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013376", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013376", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19941", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19941", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001007", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001007", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002919", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002919", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006207", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006207", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007934", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007934", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014853", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014853", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036084", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036084", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050780", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050780", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058753", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058753", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058754", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058754", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058755", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058755", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11339", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11339", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11339:SF228", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11339:SF228", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00094", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00094", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01826", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01826", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05270", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05270", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08742", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08742", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23244", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23244", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25960", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25960", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25961", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25961", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FF44", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF44", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF44-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF44-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LK73-1", "url": "https://www.uniprot.org/uniprotkb/I3LK73-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "TQSRPGNPVFLPPQWWPWGGGATASFQVMDWKWPLIVFSAFSCLSKEAEALDSLAMSSWERRLHRAKCAPSYLFSCFNGGECVHPAFCDCRRFNATGPRCQMVYNTGPERDSICRAWGQHHVETFDGLYYYLSGKGSYTLVGHHEPEGQTFSVQVHNDPQCGSSPYTCSRSVSLFFAGEQEIHLAKEVTHGGVRVQLPHVMGSLHLQQLAGYVLVRHQSAFTLAWDGASAVYIKMSPEFLGWTHGLCGNNNADPQDDLVTSYGKLTDDVAEFVHSWQEQAPNQPPGPTTSTLPRPPCLQQSPGTMQGVYDRCEALLRPPFDACHAYVSPLPFTASCTSDLCQSAGDEATWCRALAEYARACAQAGRPLQGWRNQLWQCMVRCKEKAFIYNECIACCPASCQPRASCVDSEIACVDGCYCPDGLIFEDGGCVAPAECPCEFHGTLYPVGSVVKEDCNTWSVSTAGQEGGCSVTGDIHFTTFDGRRYTFPATCQYILAKSRSSGTFTVTLQNAPCGLNQDGVCVQSVSVILHQDPRRQVTLTQAGDVLLFDQYKVTPPYTDDAFEIRRLSSVFLRVKTNVGVQVLYDREGLRLYLQVDQRWVEDTVGLCGTFNGNTQDDFLSPVGVPESTPQLFGNSWKTLSACSPLVSGSPLDPCDVHLQAASYALQSCSVLTGDLFAPCSVYLSPVPYFEQCRRDACRCGQPCLCATLAHYAHLCQRHGLPIDFRTRLPACALSCEATKEYSPCVAPCGQTCQDLASPEACGVEGGSDLRGDECVEGCACPPDTYLDTQADLCVPRNQCSCHFQGMDYPPGDSDIPSLGHCHCKDGVMSCDSRAPAAACPAGQVFVNCSDLHTDPELSRERTCEQQLLNLSVPARGPCLSGCACPQGLLRHEDACFLPEECPCTWKGKEYFPGDQVMSPCHSCVCQRGSFQCTLHPCASTCTAYGDRHYRTFDGLPFDFVGACKVHLVKSTSDFSFSVMVENVNCYGSGIICRKFISINVGNSLIIFDDDSGSPSPESFLDEKQEVHTWRAGFFTLVHFPREHITLLWDQRTTVHIQAGPQWQGQLTGLSLGLSLPPQCPDTLDPRDTCVLNPLREPFAKKECSILLSEVFETCHPVVDVTWFYSNCLTDTCGCSRGGDCECFCASVSAYAHQCCQHGVVVDWRTPRLCPYDCEFFNKALGKGPYQLASLAAGGALVAVKAAGSAIDLVRAEDVVPGDIVNFLLTAALFKAKAHDPDVVSLEAADRPNFFLHATANGSVQLAKWQASDAFHHQASFALHRGTWRAGLVALESLAEPGAFLYVSGPVLALRLYKRTEAFRRGTLFRLLDAKPSGAAYPPCEWHYDACASPCFRTCRDPWAASCRDVPRIEGCVPACPTPRVLDEVTQRCVYLEDCVEPAVWVPTEALSNETLPSSQELPTPGDEELQLPQEVPGATPHRPAFTPAAPVTTALNPPTAATEGPTLPPGPTQATLQQPLVVTASNLPAQPTEALTTKGVTASHLATPGAPEPSSLPLSQQMLTSGMWPGAMETTKVTVTFAGVPNMTNSTPSPAVPRFPLVTKAVTVLGPGSLPVTTTTHQPVPSLELPASPSSRPVASPAVTSRPPTSSGPHEALPTPAITQRMTGTGISQPVQAQNFSGPSSPPAEARTAAEQIPVSPLTTKKVETSTERVQPGPSQPMGPPAAPLPSPVPTALPHPTQHATTAAWPPALPLGSTAATSLSTAAHRLGATPFTSLESTQPPQLLSGLLPDTSLPLAKVGTSAPVATPGPKGSAVTPPLQQQAASLPVAATPPARTLSPALLLTPAVMAQAHRPSHVVSQATGTAPGQLLGATLPASGVMAVAEGVASPASVAPQKSTTEKKAVLSKQVSLPPWIYGSAQGGPTELTPAVAHTLATLVMEAEGPWASTVTPMPTSYSLSRVSARTASRESSLVLLPQLPEAHGTSAGPQPPAELEGEATTQQSGRSAPAQSILEGSAEALAATTEANTSAACMPIAEQDCIRHICLEGQLIRVNQSQHCPQGAAPPQCGVLGLAVRVGGDRCCPIWECACRCSIFPDLSFVTFDGSHAALFKEAIYILSQSPDETITVHVLDCKSANLGHLNWPPFCLVMLNVTHLTHQVTIDRFTRKVSVNSQPVWPPVSRLGFRIEDTGHMYLIRTPSHVQIQWLHSSGLMILEATKASKAQGRGLCGICDGDAANDLTLEDGSVLGEAEDPAPFLDSWQVPSSLTSMGQTRFRPDSCATADCSPCLRMVSNRTFSACHRFVPPESFCELWIRDTKYVQQPCVALTVYVAMCHKFHVCIEWRRSDYCPFLCSSDSTYQACVAACQPPETCQDGLLGPLDPEQCQVLGEGCVCSEGTILHRRHSGLCIPEEKCACTDSMGVPRALGETWNSSLSGCCQHQCQAPGTIVPVDLGCPDPRPESCPRFGEVALLLPTKDPCCLGTVCVCNQTLCEGLAPTCSPGHRLLTHFQEDSCCPSYSCECDPDLCEAELVPSCRQDQILIAGRLGDSCCTSYFCACGDCPDPIPECQEGEALTVDRNTTELCCPLYQCVCESFRCPQVHCGLGTALVEVWSPDRCCPYKSCECDCDTIPVPRCHLWEKSQLDEAFMHSVENVCGCAKYECVKAPVCLSRELGVMQPGQTVVELSADGVCHTSRCTDLLDPLTSFYQINTTSVLCDVHCEANQEYEHPRDLAACCGSCRNVSCLFTFPNGTTSLFLPGASWIADCTRHHCSSTPLGAVLVRSPISCPPLNETECAKVGGSVVPSLEGCCRTCKEDGRSCKKVTIRMTIRKNECRSNTPVNLVSCDGRCPSASIYNYNINTYARFCKCCREVGLQRRSVQLFCATNGTWVPYTVQEPTDCACQWS", "length": 2863, "header": "tr|I3LK73-1|I3LK73_PIG Isoform 1 of Otogelin OS=Sus scrofa OX=9823 GN=OTOG PE=3 SV=3 CANONICAL=I3LK73-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FF44-1", "url": "https://www.uniprot.org/uniprotkb/I3LK73/entry#A0A8W4FF44-1", "sequence": { "sequence": "ASLLGPRAGLEILSFCPLSGGPGEVGPLPPSRKPALPEVEAEALDSLAMSSWERRLHRAKCAPSYLFSCFNGGECVHPAFCDCRRFNATGPRCQMVYNTGPERDSICRAWGQHHVETFDGLYYYLSGKGSYTLVGHHEPEGQTFSVQVHNDPQCGSSPYTCSRSVSLFFAGEQEIHLAKEVTHGGVRVQLPHVMGSLHLQQLAGYVLVRHQSAFTLAWDGASAVYIKMSPEFLGWTHGLCGNNNADPQDDLVTSYGKLTDDVAEFVHSWQEQAPNQPPGPTTSTLPRPPCLQQSPGTMQVWILGRPPPPTWLDLLPYARACAQAGRPLQGWRNQLWQCMVRCKEKAFIYNECIACCPASCQPRASCVDSEIACVDGCYCPDGLIFEDGGCVAPAECPCEFHGTLYPVGSVVKEDCNTCTCTAGKWVCSTSVCPAECSVTGDIHFTTFDGRRYTFPATCQYILAKSRSSGTFTVTLQNAPCGLNQDGVCVQSVSVILHQDPRRQVTLTQAGDVLLFDQYKVTPPYTDDAFEIRRLSSVFLRVKTNVGVQVLYDREGLRLYLQVDQRWVEDTVGLCGTFNGNTQDDFLSPVGVPESTPQLFGNSWKTLSACSPLVSGSPLDPCDVHLQAASYALQSCSVLTGDLFAPCSVYLSPVPYFEQCRRDACRCGQPCLCATLAHYAHLCQRHGLPIDFRTRLPACALSCEATKEYSPCVAPCGQTCQDLASPEACGVEGGSDLRGDECVEGCACPPDTYLDTQADLCVPRNQCSCHFQGMDYPPGDSDIPSLGHCHCKDGVMSCDSRAPAAACPAGQVFVNCSDLHTDPELSRERTCEQQLLNLSVPARGPCLSGCACPQGLLRHEDACFLPEECPCTWKGKEYFPGDQVMSPCHSCVCQRGSFQCTLHPCASTCTAYGDRHYRTFDGLPFDFVGACKVHLVKSTSDFSFSVMVENVNCYGSGIICRKFISINVGNSLIIFDDDSGSPSPESFLDEKQEVHTWRAGFFTLVHFPREHITLLWDQRTTVHIQAGPQWQGQLTGLSLGLSLPPQCPDTLDPRDTCVLNPLREPFAKKECSILLSEVFETCHPVVDVTWFYSNCLTDTCGCSRGGDCECFCASVSAYAHQCCQHGVVVDWRTPRLCPYDCEFFNKALGKGPYQLASLAAGGALVAVKAAGSAIDLVRAEDVVPGDIVNFLLTAALFKAKAHDPDVVSLEAADRPNFFLHATANGSVQLAKWQASDAFHHQASFALHRGTWRAGLVALESLAEPGAFLYVSGPVLALRLYKRTEAFRRGTLFRLLDAKPSGAAYPPCEWHYDACASPCFRTCRDPWAASCRDVPRIEGCVPACPTPRVLDEVTQRCVYLEDCVEPAVWVPTEALSNETLPSSQELPTPGDEELQLPQEVPGATPHRPAFTPAAPVTTALNPPTAATEGPTLPPGPTQATLQQPLVVTASNLPAQPTEALTTKGVTASHLATPGAPEPSSLPLSQQMLTSGMWPGAMETTKVTVTFAGVPNMTNSTPSPAVPRFPLVTKAVTVLGPGSLPVTTTTHQPVPSLELPASPSSRPVASPAVTSRPPTSSGPHEALPTPAITQRMTGTGISQPVQAQNFSGPSSPPAEARTAAEQIPVSPLTTKKVETSTERVQPGPSQPMGPPAAPLPSPVPTALPHPTQHATTAAWPPALPLGSTAATSLSTAAHRLGATPFTSLESTQPPQLLSGLLPDTSLPLAKVGTSAPVATPGPKGSAVTPPLQQQAASLPVAATPPARTLSPALLLTPAVMAQAHRPSHVVSQATGTAPGQLLGATLPASGVMAVAEGVASPASVAPQKSTTEKKAVLSKQVSLPPWIYGSAQGGPTELTPAVAHTLATLVMEAEGPWASTVTPMPTSYSLSRVSARTASRESSLVLLPQLPEAHGTSAGPQPPAELEGEATTQQSGRSAPAQSILEGSAEALAATTEANTSAACMPIAEQDCIRHICLEGQLIRVNQSQHCPQGAAPPQCGVLGLAVRVGGDRCCPIWECACRCSIFPDLSFVTFDGSHAALFKEAIYILSQSPDETITVHVLDCKSANLGHLNWPPFCLVMLNVTHLTHQVTIDRFTRKVSVNSQPVWPPVSRLGFRIEDTGHMYLIRTPSHVQIQWLHSSGLMILEATKASKAQGRGLCGICDGDAANDLTLEDGSVLGEAEDPAPFLDSWQVPSSLTSMGQTRFRPDSCATADCSPCLRMVSNRTFSACHRFVPPESFCELWIRDTKYVQQPCVALTVYVAMCHKFHVCIEWRRSDYCPFLCSSDSTYQACVAACQPPETCQDGLLGPLDPEQCQVLGEGCVCSEGTILHRRHSGLCIPEEKCACTDSMGVPRALGETWNSSLSGCCQHQCQAPGTIVPVDLGCPDPRPESCPRFGEVALLLPTKDPCCLGTVCVCNQTLCEGLAPTCSPGHRLLTHFQEDSCCPSYSCECDPDLCEAELVPSCRQDQILIAGRLGDSCCTSYFCACGDCPDPIPECQEGEALTVDRNTTELCCPLYQCVCESFRCPQVHCGLGTALVEVWSPDRCCPYKSCECDCDTIPVPRCHLWEKSQLDEAFMHSVENVCGCAKYECVKAPVCLSRELGVMQPGQTVVELSADGVCHTSRCTDLLDPLTSFYQINTTSVLCDVHCEANQEYEHPRDLAACCGSCRNVSCLFTFPNGTTSLFLPGASWIADCTRHHCSSTPLGAVLVRSPISCPPLNETECAKVGGSVVPSLEGCCRTCKEDGRSCKKVTIRMTIRKNECRSNTPVNLVSCDGRCPSASIYNYNINTYARFCKCCREVGLQRRSVQLFCATNGTWVPYTVQEPTDCACQWS", "length": 2830, "header": "tr|A0A8W4FF44-1|I3LK73_PIG Computationally mapped isoform of Otogelin OS=Sus scrofa OX=9823 GN=OTOG PE=3 SV=1 CANONICAL=I3LK73-1" }, "locus": { "chromosome": "2", "start_pos": 41584948, "end_pos": 41498502, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099446.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099446.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077487.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077487.1" } ] } }, { "isoform_ac": "I3LK73-1", "url": "https://www.uniprot.org/uniprotkb/I3LK73/entry#I3LK73-1", "sequence": { "sequence": "TQSRPGNPVFLPPQWWPWGGGATASFQVMDWKWPLIVFSAFSCLSKEAEALDSLAMSSWERRLHRAKCAPSYLFSCFNGGECVHPAFCDCRRFNATGPRCQMVYNTGPERDSICRAWGQHHVETFDGLYYYLSGKGSYTLVGHHEPEGQTFSVQVHNDPQCGSSPYTCSRSVSLFFAGEQEIHLAKEVTHGGVRVQLPHVMGSLHLQQLAGYVLVRHQSAFTLAWDGASAVYIKMSPEFLGWTHGLCGNNNADPQDDLVTSYGKLTDDVAEFVHSWQEQAPNQPPGPTTSTLPRPPCLQQSPGTMQGVYDRCEALLRPPFDACHAYVSPLPFTASCTSDLCQSAGDEATWCRALAEYARACAQAGRPLQGWRNQLWQCMVRCKEKAFIYNECIACCPASCQPRASCVDSEIACVDGCYCPDGLIFEDGGCVAPAECPCEFHGTLYPVGSVVKEDCNTWSVSTAGQEGGCSVTGDIHFTTFDGRRYTFPATCQYILAKSRSSGTFTVTLQNAPCGLNQDGVCVQSVSVILHQDPRRQVTLTQAGDVLLFDQYKVTPPYTDDAFEIRRLSSVFLRVKTNVGVQVLYDREGLRLYLQVDQRWVEDTVGLCGTFNGNTQDDFLSPVGVPESTPQLFGNSWKTLSACSPLVSGSPLDPCDVHLQAASYALQSCSVLTGDLFAPCSVYLSPVPYFEQCRRDACRCGQPCLCATLAHYAHLCQRHGLPIDFRTRLPACALSCEATKEYSPCVAPCGQTCQDLASPEACGVEGGSDLRGDECVEGCACPPDTYLDTQADLCVPRNQCSCHFQGMDYPPGDSDIPSLGHCHCKDGVMSCDSRAPAAACPAGQVFVNCSDLHTDPELSRERTCEQQLLNLSVPARGPCLSGCACPQGLLRHEDACFLPEECPCTWKGKEYFPGDQVMSPCHSCVCQRGSFQCTLHPCASTCTAYGDRHYRTFDGLPFDFVGACKVHLVKSTSDFSFSVMVENVNCYGSGIICRKFISINVGNSLIIFDDDSGSPSPESFLDEKQEVHTWRAGFFTLVHFPREHITLLWDQRTTVHIQAGPQWQGQLTGLSLGLSLPPQCPDTLDPRDTCVLNPLREPFAKKECSILLSEVFETCHPVVDVTWFYSNCLTDTCGCSRGGDCECFCASVSAYAHQCCQHGVVVDWRTPRLCPYDCEFFNKALGKGPYQLASLAAGGALVAVKAAGSAIDLVRAEDVVPGDIVNFLLTAALFKAKAHDPDVVSLEAADRPNFFLHATANGSVQLAKWQASDAFHHQASFALHRGTWRAGLVALESLAEPGAFLYVSGPVLALRLYKRTEAFRRGTLFRLLDAKPSGAAYPPCEWHYDACASPCFRTCRDPWAASCRDVPRIEGCVPACPTPRVLDEVTQRCVYLEDCVEPAVWVPTEALSNETLPSSQELPTPGDEELQLPQEVPGATPHRPAFTPAAPVTTALNPPTAATEGPTLPPGPTQATLQQPLVVTASNLPAQPTEALTTKGVTASHLATPGAPEPSSLPLSQQMLTSGMWPGAMETTKVTVTFAGVPNMTNSTPSPAVPRFPLVTKAVTVLGPGSLPVTTTTHQPVPSLELPASPSSRPVASPAVTSRPPTSSGPHEALPTPAITQRMTGTGISQPVQAQNFSGPSSPPAEARTAAEQIPVSPLTTKKVETSTERVQPGPSQPMGPPAAPLPSPVPTALPHPTQHATTAAWPPALPLGSTAATSLSTAAHRLGATPFTSLESTQPPQLLSGLLPDTSLPLAKVGTSAPVATPGPKGSAVTPPLQQQAASLPVAATPPARTLSPALLLTPAVMAQAHRPSHVVSQATGTAPGQLLGATLPASGVMAVAEGVASPASVAPQKSTTEKKAVLSKQVSLPPWIYGSAQGGPTELTPAVAHTLATLVMEAEGPWASTVTPMPTSYSLSRVSARTASRESSLVLLPQLPEAHGTSAGPQPPAELEGEATTQQSGRSAPAQSILEGSAEALAATTEANTSAACMPIAEQDCIRHICLEGQLIRVNQSQHCPQGAAPPQCGVLGLAVRVGGDRCCPIWECACRCSIFPDLSFVTFDGSHAALFKEAIYILSQSPDETITVHVLDCKSANLGHLNWPPFCLVMLNVTHLTHQVTIDRFTRKVSVNSQPVWPPVSRLGFRIEDTGHMYLIRTPSHVQIQWLHSSGLMILEATKASKAQGRGLCGICDGDAANDLTLEDGSVLGEAEDPAPFLDSWQVPSSLTSMGQTRFRPDSCATADCSPCLRMVSNRTFSACHRFVPPESFCELWIRDTKYVQQPCVALTVYVAMCHKFHVCIEWRRSDYCPFLCSSDSTYQACVAACQPPETCQDGLLGPLDPEQCQVLGEGCVCSEGTILHRRHSGLCIPEEKCACTDSMGVPRALGETWNSSLSGCCQHQCQAPGTIVPVDLGCPDPRPESCPRFGEVALLLPTKDPCCLGTVCVCNQTLCEGLAPTCSPGHRLLTHFQEDSCCPSYSCECDPDLCEAELVPSCRQDQILIAGRLGDSCCTSYFCACGDCPDPIPECQEGEALTVDRNTTELCCPLYQCVCESFRCPQVHCGLGTALVEVWSPDRCCPYKSCECDCDTIPVPRCHLWEKSQLDEAFMHSVENVCGCAKYECVKAPVCLSRELGVMQPGQTVVELSADGVCHTSRCTDLLDPLTSFYQINTTSVLCDVHCEANQEYEHPRDLAACCGSCRNVSCLFTFPNGTTSLFLPGASWIADCTRHHCSSTPLGAVLVRSPISCPPLNETECAKVGGSVVPSLEGCCRTCKEDGRSCKKVTIRMTIRKNECRSNTPVNLVSCDGRCPSASIYNYNINTYARFCKCCREVGLQRRSVQLFCATNGTWVPYTVQEPTDCACQWS", "length": 2863, "header": "tr|I3LK73-1|I3LK73_PIG Isoform 1 of Otogelin OS=Sus scrofa OX=9823 GN=OTOG PE=3 SV=3 CANONICAL=I3LK73-1" }, "locus": { "chromosome": "2", "start_pos": 41584934, "end_pos": 41498502, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030282.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030282.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024487.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024487.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1377, "start_aa": "Thr", "end_pos": 1377, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1377", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1419, "start_aa": "Thr", "end_pos": 1419, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1419", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1468, "start_aa": "Thr", "end_pos": 1468, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1468", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1615, "start_aa": "Thr", "end_pos": 1615, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1615", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1765, "start_aa": "Thr", "end_pos": 1765, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1765", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1774, "start_aa": "Thr", "end_pos": 1774, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1774", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1789, "start_aa": "Thr", "end_pos": 1789, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1789", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 288, "start_aa": "Thr", "end_pos": 288, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr288", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FF44", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FF44" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" }, { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" }, { "name": "L-arabinose metabolic process", "id": "GO:0046373", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046373", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "alpha-L-arabinofuranosidase activity", "id": "GO:0046556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046556", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" }, { "name": "extracellular matrix structural constituent", "id": "GO:0005201", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005201", "evidence": [ { "database": "UniProtKB", "id": "I3LK73", "url": "https://www.uniprot.org/uniprotkb/I3LK73" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1256, "end_pos": 1258, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1408, "end_pos": 1410, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1542, "end_pos": 1544, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1545, "end_pos": 1547, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1635, "end_pos": 1637, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1985, "end_pos": 1987, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2012, "end_pos": 2014, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2110, "end_pos": 2112, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2252, "end_pos": 2254, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2389, "end_pos": 2391, "annotation": 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"MCAMAATTSGDKDCPAHFSAAADRILSGFQEDFLWPMLVAEFLVALAGNSLALYRFCTREQRPWHPAVIFSAQLAISDLLYALTLPPLAAYFYPPKHWRYGEVTCRLERFLFTCNLLGSVIFITCISLNRYLGIVHPFFTHSQLQPKHAWAISTAGWVLAALLAAPTLSFSHLKRPKQEGRCTVATPEACIKCLGTADDNQLEAYRVYGLVLLALGCGLPLLLNLAAYGALGRAVRRSHGMTAANKLHVIVLVASGVALYASSYVPYYVTQVLNVYARQRWRALCPGFTSTAQAEKALDWRTYVAYQVTRGLIPLAICIHPLLYMAVVPSLGCCRQHCLGCREGQTPEKAECSSQSLPLNVTATPKTSGPQSPELSP", "length": 377, "header": "tr|I3LGK2-1|I3LGK2_PIG Isoform 1 of Purinergic receptor P2Y11 OS=Sus scrofa OX=9823 GN=P2RY11 PE=3 SV=1 CANONICAL=I3LGK2-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FGD0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGK2/entry#A0A8W4FGD0-1", "sequence": { "sequence": "MLVAEFLVALAGNSLALYRFCTREQRPWHPAVIFSAQLAISDLLYALTLPPLAAYFYPPKHWRYGEVTCRLERFLFTCNLLGSVIFITCISLNRYLGIVHPFFTHSQLQPKHAWAISTAGWVLAALLAAPTLSFSHLKRPKQEGRCTVATPEACIKCLGTADDNQLEAYRVYGLVLLALGCGLPLLLNLAAYGALGRAVRRSHGMTAANKLHVIVLVASGVALYASSYVPYYVTQVLNVYARQRWRALCPGFTSTAQAEKALDWRTYVAYQVTRGLIPLAICIHPLLYMAVVPSLGCCRQHCLGCREGQTPEKAECSSQSLPLNVTATPKTSGPQSPELSP", "length": 341, "header": "tr|A0A8W4FGD0-1|A0A8W4FGD0_PIG Computationally mapped isoform of Purinergic receptor P2Y11 OS=Sus scrofa OX=9823 GN=P2RY11 PE=3 SV=1 CANONICAL=I3LGK2-1" }, "locus": { "chromosome": "2", "start_pos": 68965915, "end_pos": 68964893, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104612.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104612.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078295.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078295.1" } ] } }, { "isoform_ac": "I3LGK2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGK2/entry#I3LGK2-1", "sequence": { "sequence": "MCAMAATTSGDKDCPAHFSAAADRILSGFQEDFLWPMLVAEFLVALAGNSLALYRFCTREQRPWHPAVIFSAQLAISDLLYALTLPPLAAYFYPPKHWRYGEVTCRLERFLFTCNLLGSVIFITCISLNRYLGIVHPFFTHSQLQPKHAWAISTAGWVLAALLAAPTLSFSHLKRPKQEGRCTVATPEACIKCLGTADDNQLEAYRVYGLVLLALGCGLPLLLNLAAYGALGRAVRRSHGMTAANKLHVIVLVASGVALYASSYVPYYVTQVLNVYARQRWRALCPGFTSTAQAEKALDWRTYVAYQVTRGLIPLAICIHPLLYMAVVPSLGCCRQHCLGCREGQTPEKAECSSQSLPLNVTATPKTSGPQSPELSP", "length": 377, "header": "tr|I3LGK2-1|I3LGK2_PIG Isoform 1 of Purinergic receptor P2Y11 OS=Sus scrofa OX=9823 GN=P2RY11 PE=3 SV=1 CANONICAL=I3LGK2-1" }, "locus": { "chromosome": "2", "start_pos": 68965915, "end_pos": 68963005, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028035.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028035.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023196.1", "url": "https://www.ensembl.org/id/ENSSSCP00000023196.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 309, "start_aa": "Thr", "end_pos": 309, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr309", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGK2", "url": "https://www.uniprot.org/uniprotkb/I3LGK2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100533477", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100533477", "resource": "KEGG Pathway" }, { "id": "R-SSC-416476", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416476", "resource": "Reactome", "description": "G alpha (q) signalling events" }, { "id": "R-SSC-417957", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-417957", "resource": "Reactome", "description": "P2Y receptors" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7FRZ8-1", "protein_name": "P2Y purinoceptor 11", "gene_name": "P2ry11", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAFSGDCPEKYVEAAEQEYRRFQEGYLWAILMAEFLVAVGGNGLALFRFITQEQRPWNPAVVFSAQLAVSNLCYSFTLPPLAAYFYPPKNWSFGEVACRLERFVFTCNLLGGIIFITCISLSRYMVVVHPFFTRRHLRPKHAWVISAASWAMAILLAAPMLGFSHQNQPQSKPGSCNNTNREACVKCLGMMEDSQIETFRNYSLVLACLGGILPLLLTLMAYSALGSVVLRSLSMTTAQKLHVVVLVTSGVALYACSYVPYHITQVLYVNSLLSWKALCPGFSTESQAKAALNPRAFFGYQTTRILVPLATCMHPLLYMAVAPSLNCHSCHGDPEDQSPHQDLPLASATTSQSQLSPEASSSQTGL", "length": 367 }, "evidence": [ { "id": "I3LGK2", "url": "https://omabrowser.org/oma/group/I3LGK2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q96G91-1", "protein_name": "P2Y purinoceptor 11", "gene_name": "P2RY11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"id": "ENSSSCP00000078241.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078241.1" } ] } }, { "isoform_ac": "I3LJ58-1", "url": "https://www.uniprot.org/uniprotkb/I3LJ58/entry#I3LJ58-1", "sequence": { "sequence": "PCPHVPTHQDFRSLQAKFQASQSETSEHPKKPPKPEFNKLLKKFPQPELGEHSKKPLQPEFTDLPKKPSKLESSELKFKKFPQLEATLFPRKPPKPEVGEAPQKLPQPELSNTPRPSAEAKFPRKFQQPEPNEATLKPLQPEFSTFPKRPPQPEFSVVPRKPPQPQVSGLPKKSLLEPESSEVPPTPPSKPECSEPHPHSSQPNFSILLKKPPQPEVSANLRKQGLSEVSGHPKKSLPQIDDLPKKPLQPEFGNLTRTSSEPEFNLLPQKFLQPECQGHPRKFSQPEATLLPKKLPQAEFLGDLPRKPPLPGSVSESSLPTAVAGSSSRFPLSPGFGARQQRSALTRSVGSRLGFKPGHPPRRRPLPPISSLGPPPAKPPLPPGPRTIQSFWRTSAADTALPRSPSAGIRFQVRQPADIPQNPDEVYELYDDVESTDDYRPSTKGRDEVLSTQQSPKRPQDPEPRKKAPQQQQSPPEDLKSLKQIRKAEKAEREFRKKFKFEGEIVILTRMMIDPNAKTRRGGGKHLGIRRGEILEVIEFTSKEEMLCRDTKGKYGYVPRTALLPLETEVYDDVDFWDPLENQPLPREQ", "length": 589, "header": "tr|I3LJ58-1|I3LJ58_PIG Isoform 1 of PML-RARA-regulated adapter molecule 1 OS=Sus scrofa OX=9823 GN=PRAM1 PE=4 SV=3 CANONICAL=I3LJ58-1" }, "locus": { "chromosome": "2", "start_pos": 70812674, "end_pos": 70807434, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032462.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032462.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024115.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024115.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 186, "start_aa": "Thr", "end_pos": 186, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr186", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LJ58", "url": "https://www.uniprot.org/uniprotkb/I3LJ58" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LJ58", "url": "https://www.uniprot.org/uniprotkb/I3LJ58" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "I3LJ58", "url": "https://www.uniprot.org/uniprotkb/I3LJ58" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "integrin-mediated signaling pathway", "id": "GO:0007229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007229", "evidence": [ { "database": "UniProtKB", "id": "I3LJ58", "url": "https://www.uniprot.org/uniprotkb/I3LJ58" } ], "pmid": "" }, { "name": "protein localization to plasma membrane", "id": "GO:0072659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072659", "evidence": [ { "database": "UniProtKB", "id": "I3LJ58", "url": 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"uniprot_ac": "I3LES5", "uniprot_id": "I3LES5_PIG", "mass": { "chemical_mass": 55085.0, "monoisotopic_mass": 55085.0 }, "refseq": { "ac": "XP_005655835", "name": "tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655835" }, "gene_names": [ { "name": "DUS2", "type": "recommended", "evidence": [ { "id": "I3LES5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ] }, { "name": "DUS2", "type": "synonym", "evidence": [ { "id": "XP_005655835", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655835" } ] } ], "protein_names": [ { "name": "tRNA-dihydrouridine(20) synthase [NAD(P)+]-like", "type": "recommended", "evidence": [ { "id": "I3LES5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LES5/entry#names_and_taxonomy" } ] }, { "name": "1.3.1.91", "type": "synonym", "evidence": [ { "id": "I3LES5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LES5/entry#names_and_taxonomy" } ] }, { "name": "Dihydrouridine synthase 2", "type": "synonym", "evidence": [ { "id": "I3LES5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LES5/entry#names_and_taxonomy" } ] }, { "name": "tRNA-dihydrouridine synthase 2-like", "type": "synonym", "evidence": [ { "id": "I3LES5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LES5/entry#names_and_taxonomy" } ] }, { "name": "tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005655835", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655835" } ] } ], "function": [ { "annotation": "Catalyzes the NADPH-dependent synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U20 in cytoplasmic tRNAs. Activity depends on the presence of guanosine at position 19 in the tRNA substrate. Negatively regulates the activation of EIF2AK2/PKR.", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5#function" }, { "database": "UniProtKB", "id": "ARBA00054045", "url": "https://www.uniprot.org/uniprotkb/ARBA00054045#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DUS2", "url": "https://www.uniprot.org/uniprotkb/I3LES5", "locus": { "chromosome": "6", "start_pos": 28661319, "end_pos": 28617408, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000059913", "url": "https://www.ensembl.org/id/ENSSSCG00000059913" } ] } } ], "crossref": [ { "id": "ENSSSCG00000029578", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029578", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02801", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02801", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd19871", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19871", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621573", "url": "https://www.ncbi.nlm.nih.gov/gene/100621573", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013785", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013785", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014720", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014720", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018517", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018517", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035587", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035587", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044463", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044463", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052582", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052582", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621573", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621573", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GPIRTNS", "url": "https://omabrowser.org/oma/group/GPIRTNS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LES5", "url": "https://www.orthodb.org/?gene=I3LES5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45936", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45936", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45936:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45936:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00035", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00035", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01207", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01207", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9833482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005655835", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655835", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "53336", "url": "https://www.rhea-db.org/rhea/53336", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4FIQ7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIQ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIQ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIQ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LES5-1", "url": "https://www.uniprot.org/uniprotkb/I3LES5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIVNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEALSTVDFVAPDDRVVFRTCEREQSRVVFQMGTSDAERALAVAKLVENDVAGIDVNMGCPKEYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRLLPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEAIKAIAETLSIPVIANGGSHDHIQKYLDIEDFRQATAASSVMVARAAMWNPSVFLKEGPRPLEEVMQKYIRYAVQYDNHHTNTKYCLCQMLREQLESPQGRLLHAAQSSQEICEAFGLGAFYKETTRELEARRAQLLARSPEETEEPAEDTSGVIKMAVKFDRRAYSPQITPKMCLLEWCRREKLAQPVYETVQRPMDRLFCSVVTVAEQKYQSTLWDKSKKLAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREASDQDPGDPTAQEPAVPGELCKKPFVALASGKESPLQGW", "length": 493, "header": "tr|I3LES5-1|I3LES5_PIG Isoform 1 of tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Sus scrofa OX=9823 GN=DUS2 PE=3 SV=1 CANONICAL=I3LES5-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FIQ7-1", "url": "https://www.uniprot.org/uniprotkb/I3LES5/entry#A0A8W4FIQ7-1", "sequence": { "sequence": "MIVNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEALSTVDFVAPDDRVVFRTCEREQSRVVFQMGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRLLPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEAIKAIAETLSIPVIANGGSHDHIQKYLDIEDFRQATAASSVMVARAAMWNPSVFLKEGPRPLEEVMQKYIRYAVQYDNHHTNTKYCLCQMLREQLESPQGRLLHAAQSSQEICEAFGLGAFYKETTRELEARRAQLLARSPEETEEPAEDTSGVIKMAVKFDRRAYSPQITPKMCLLEWCRREKLAQPVYETVQRPMDRLFCSVVTVAEQKYQSTLWDKSKKLAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREASDQDPGDPTAQEPAVPGELCKKPFVALASGKESPLQGW", "length": 458, "header": "tr|A0A8W4FIQ7-1|A0A8W4FIQ7_PIG Computationally mapped isoform of Dihydrouridine synthase 2 OS=Sus scrofa OX=9823 GN=DUS2 PE=4 SV=1 CANONICAL=I3LES5-1" }, "locus": { "chromosome": "6", "start_pos": 28660981, "end_pos": 28621134, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105357.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105357.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078768.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078768.1" } ] } }, { "isoform_ac": "I3LES5-1", "url": "https://www.uniprot.org/uniprotkb/I3LES5/entry#I3LES5-1", "sequence": { "sequence": "MIVNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEALSTVDFVAPDDRVVFRTCEREQSRVVFQMGTSDAERALAVAKLVENDVAGIDVNMGCPKEYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRLLPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEAIKAIAETLSIPVIANGGSHDHIQKYLDIEDFRQATAASSVMVARAAMWNPSVFLKEGPRPLEEVMQKYIRYAVQYDNHHTNTKYCLCQMLREQLESPQGRLLHAAQSSQEICEAFGLGAFYKETTRELEARRAQLLARSPEETEEPAEDTSGVIKMAVKFDRRAYSPQITPKMCLLEWCRREKLAQPVYETVQRPMDRLFCSVVTVAEQKYQSTLWDKSKKLAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREASDQDPGDPTAQEPAVPGELCKKPFVALASGKESPLQGW", "length": 493, "header": "tr|I3LES5-1|I3LES5_PIG Isoform 1 of tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Sus scrofa OX=9823 GN=DUS2 PE=3 SV=1 CANONICAL=I3LES5-1" }, "locus": { "chromosome": "6", "start_pos": 28660981, "end_pos": 28621134, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025781.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025781.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021956.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021956.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621573", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621573", "resource": "KEGG Pathway" }, { "id": "R-SSC-9833482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "resource": "Reactome", "description": "PKR-mediated signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1I9LMB8-1", "protein_name": "tRNA-dihydrouridine synthase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDYQNKLVLAPMVRVGTLSFRMLAAEYGADITYGEEIIDHKLVKCERRLNVASGTSEFVEKGTDNVVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAALLSKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHGRKIADRPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIFSPKGKSHWEDVKKKYLRKSILWNNDVKSTKYTIKEMIAHHSCLELPEGKSINKADTLEDLA", "length": 303 }, "evidence": [ { "id": "I3LES5", "url": "https://omabrowser.org/oma/group/I3LES5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A3L7I074-1", "protein_name": "tRNA-dihydrouridine(20) synthase [NAD(P)+]-like", "gene_name": "Dus2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIVNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYSTKGGMGAALLSDPDKIEKILSTLVKGIHKPVTCKIRILPSLEDTLNLVKRIERTGISAIAVHGRNREERPQHPVSCEVIRAIAETLSIPVIANGGSHDHIQQHLDIEDFRQATAASSVMVARAAMWNPSIFLKDGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSQEICEAFGLGAFYEETIRELDARRADLLAKTPEAVEEPAEDTSGIIKMAIKFDRRAYPPQITPKMCLLEWCRREKLPQPMYETVQRPIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQGLPEGRLGEESPSLNKRKREAPNQDPGGLRVQEPALPGEICKKPFVTLGSSEDDLLEGC", "length": 493 }, "evidence": [ { "id": "I3LES5", "url": "https://omabrowser.org/oma/group/I3LES5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1C4F6-1", "protein_name": "Dihydrouridine synthase 2", "gene_name": "DUS2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTVNTPLCFRGKNILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMMQCKRVVNEILETVDFVAPNERVVFRTCERERHRVIFQMGSADAGRALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTTLVKGICKPVTCKIRILPSVEDTVDLVKRIEKTGIAAIAVHGRKKEERPQHPVHCDVIKAISEAVSIPVIANGGSHDFIKEYGDIETFQKATAASSVMIARAAMWNPSIFRKEGPFPLRKVMQDYIKYAVRYDNHYTNTKYCLCQMLREQLETAQGKKLHVAQSTQEICEAFEMSEFYEETTALFEAKKTSLETKKQDEDDQMEDPNVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETVQRPLDRLFCSVVTVADQKYRSALWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLINKRKREDQEHLNNGDHGKDLAEPSHKKASFAEESSDMNAPKMQW", "length": 490 }, "evidence": [ { "id": "I3LES5", "url": "https://omabrowser.org/oma/group/I3LES5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q54QJ2-1", "protein_name": "tRNA-dihydrouridine synthase 2-like protein", "gene_name": "dus2l", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEEQQPQQEQQQQDWIESYKKSKNGVVMDYYNKKIMAPMVRVGTYPMRILAYNYGCDIAYSEELIDLKLMKSTRVVNEKLKTIDFIAKDQTLCYRTSEKDVRNVLQLGTASSMTALEAAKVVCNDICALDINMGCPKFFSVQGGMGSALLSKPETIKDILTTLKRNLNGIPITCKIRLLSTDQETIDLLRIIESTGVSAIGVHCRMIPERPRDPAHWDRLENILSNASFSVPIIANGDIFEHADIEKIKKQTKVDSIMIARGVVKNVSIFSKPSPIDLKQIIQEYTEIAYQTNNSPVNTKYVINSMLNENNITTNKEAKAMSSARDYDTITKIWGINDKFKQFCLENNIEKEDDKNINKNKNNNNKNSKKTKLEETNNQCDIKKQKIEDEDKNNNNIINKEE", "length": 402 }, "evidence": [ { "id": "I3LES5", "url": "https://omabrowser.org/oma/group/I3LES5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9D7B1-1", "protein_name": "tRNA-dihydrouridine(20) synthase [NAD(P)+]-like", "gene_name": "Dus2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQSRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYSTKGGMGAALLSDPDKIEKILSTLVKGTHRPVTCKIRILPSLEDTLNLVKRIERTGISAIAVHGRNRDERPQHPVSCEVIRAIAETLSIPVIANGGSHDHIQQHVDIEDFRQATAASSVMVARAAMWNPSIFLKDGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSQEICEAFGLGAFYEETIRELDARRADLLAKTPEAVEEPAEDTSGIIKMAIRFDRRAYPPQITPKMCLLEWCRREKLPQPVYETVQRTIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQGLPEGRLGEESPSLNKRKREAPDQDPGGPRVQEPALPGEICKKPFVTLDSSEENLLEGC", "length": 493 }, "evidence": [ { "id": "I3LES5", "url": "https://omabrowser.org/oma/group/I3LES5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NX74-1", "protein_name": "tRNA-dihydrouridine(20) synthase [NAD(P)+]-like", "gene_name": "DUS2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSREICEAFGLGAFYEETTQELDAQQARLSAKTSEQTGEPAEDTSGVIKMAVKFDRRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAEQKYQSTLWDKSKKLAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREAPDQDPGGPRAQELAQPGDLCKKPFVALGSGEESPLEGW", "length": 493 }, "evidence": [ { "id": "I3LES5", "url": "https://omabrowser.org/oma/group/I3LES5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VY45-1", "protein_name": "Dihydrouridine synthase 2, isoform B", "gene_name": "Dus2", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLRLPTILRKSFSMKTRQRLDYRNKLILAPMVRVGTLPMRLLALEMGADIVYTEELVDIKLIKSIRRPNPALGTVDFVDPSDGTIVFRTCAQETSRLVLQMGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGMGAALLADPDKAAHILRTLCSGLDIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTRDERPQHPAHPEVLRAVAQAVDIPIIANGGSKNMHCYDDLRKFQMECGADSVMVARAAQINVSIFRPEGLLPMDELIEKYLRLCVDYDNAPHNAKYCVQSILRELQETPRGKRFLQCQTLQQICEIWELGDYCRRKQRELKTMGNSGRAEVEPPEALAKRQKLEDAAIAITDEYDGIICRHMPFLRSTYPSDNHLPKTQLYVHAVKTGKSPPAYETQQCDKLFRSICTYDGQRFSSSFWEKNKKQAEQGAALVALLHLGQLEAEVLRDNGSLLN", "length": 473 }, "evidence": [ { "id": "I3LES5", "url": "https://omabrowser.org/oma/group/I3LES5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 8, "go_terms": [ { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "flavin adenine dinucleotide binding", "id": "GO:0050660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050660", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "protein kinase inhibitor activity", "id": "GO:0004860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004860", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "double-stranded RNA binding", "id": "GO:0003725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003725", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "NADPH binding", "id": "GO:0070402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070402", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "tRNA dihydrouridine synthase activity", "id": "GO:0017150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017150", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "FMN binding", "id": "GO:0010181", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010181", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "tRNA-dihydrouridine20 synthase activity", "id": "GO:0102264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102264", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "tRNA dihydrouridine synthesis", "id": "GO:0002943", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002943", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" }, { "name": "antiviral innate immune response", "id": "GO:0140374", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140374", "evidence": [ { "database": "UniProtKB", "id": "I3LES5", "url": "https://www.uniprot.org/uniprotkb/I3LES5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "53336", "name": "", "equation": "5,6-dihydrouridine(20) in tRNA + NADP(+) = uridine(20) in tRNA + NADPH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "53336", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/53336" } ] }, { "id": "R-SSC-9835385", "name": "DUS2 binds PKR", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9835385", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9835385" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LES5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LES5" }, { "id": "SM00358", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00358" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DRBM", "eco_id": "ECO_0000259", "start_pos": 370, "end_pos": 435, "start_aa": "Pro", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGH0-1", "uniprot_ac": "I3LGH0", "uniprot_id": "I3LGH0_PIG", "mass": { "chemical_mass": 37558.0, "monoisotopic_mass": 37558.0 }, "refseq": { "ac": "XP_020935226", "name": "integrin beta-1-binding protein 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935226" }, "gene_names": [ { "name": "ITGB1BP2", "type": "recommended", "evidence": [ { "id": "I3LGH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ] }, { "name": "ITGB1BP2", "type": "synonym", "evidence": [ { "id": "XP_020935226", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935226" } ] } ], "protein_names": [ { "name": "Integrin subunit beta 1 binding protein 2", "type": "synonym", "evidence": [ { "id": "I3LGH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGH0/entry#names_and_taxonomy" } ] }, { "name": "integrin beta-1-binding protein 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020935226", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935226" } ] } ], "function": [ { "annotation": "May play a role during maturation and/or organization of muscles cells.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FJY1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJY1#function" }, { "database": "UniProtKB", "id": "ARBA00054289", "url": "https://www.uniprot.org/uniprotkb/ARBA00054289#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ITGB1BP2", "url": "https://www.uniprot.org/uniprotkb/I3LGH0", "locus": { "chromosome": "X", "start_pos": 57325096, "end_pos": 57316471, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022209", "url": "https://www.ensembl.org/id/ENSSSCG00000022209" } ] } } ], "crossref": [ { "id": "ENSSSCG00000022209", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022209", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06488", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06488", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "613129", "url": "https://www.ncbi.nlm.nih.gov/gene/613129", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008978", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008978", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039790", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039790", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CCQKRTV", "url": "https://omabrowser.org/oma/group/CCQKRTV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46983", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46983", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46983:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46983:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04968", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04968", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04969", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04969", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020935226", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020935226", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FJY1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJY1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJY1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJY1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGH0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGH0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLGIVTFPSLILLLISTDSCCHHPGVPVFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCAEKLPEAPQPEGPATSSSLLEQKPPNTIPKSAETLRRERPKSDLPPKLLPLNISQALEMALEQKELDQEPGAGLDSSLIQTGASCQNPGCDAVYQGSESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGVFLAQPGCRVGRHDWGKKLLASCRHDWHQTDSLVVVTVYGQIPLPAFNWVKASQTELHIHIVFDGNRVFQAQMKLWGVVNVEQSSVSLMPSRVEISLVKADPGFWAQLEHPDALAEKSKSGVGLEMDEEESEDSDDDLSWTEEEEEAMGE", "length": 342, "header": "tr|I3LGH0-1|I3LGH0_PIG Isoform 1 of Integrin subunit beta 1 binding protein 2 OS=Sus scrofa OX=9823 GN=ITGB1BP2 PE=4 SV=2 CANONICAL=I3LGH0-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FJY1-1", "url": "https://www.uniprot.org/uniprotkb/I3LGH0/entry#A0A8W4FJY1-1", "sequence": { "sequence": "MSLLCHNKGCGQHFDPQTNLPDSCCHHPGVPVFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCAEKLPEAPQPEGPATSSSLLEQKPPNTIPKSAETLRRERPKSDLPPKLLPLNISQALEMALEQKELDQEPGAGLDSSLIQTGASCQNPGCDAVYQGSESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGVFLAQPGCRVGRHDWGKKLLASCRHDWHQTDSLVVVTVYGQIPLPAFNWVKASQTELHIHIVFDGNRVFQAQMKLWGAENLGDSNSEKLQTRKLTKPQMISRVLHRTLSSQFRFKEHKVSLGARSKMDVGEWTWAAKIRN", "length": 336, "header": "tr|A0A8W4FJY1-1|A0A8W4FJY1_PIG Computationally mapped isoform of Integrin beta-1-binding protein 2 OS=Sus scrofa OX=9823 GN=ITGB1BP2 PE=4 SV=1 CANONICAL=I3LGH0-1" }, "locus": { "chromosome": "X", "start_pos": 57324886, "end_pos": 57316580, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106686.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106686.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079531.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079531.1" } ] } }, { "isoform_ac": "I3LGH0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGH0/entry#I3LGH0-1", "sequence": { "sequence": "MLGIVTFPSLILLLISTDSCCHHPGVPVFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCAEKLPEAPQPEGPATSSSLLEQKPPNTIPKSAETLRRERPKSDLPPKLLPLNISQALEMALEQKELDQEPGAGLDSSLIQTGASCQNPGCDAVYQGSESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGVFLAQPGCRVGRHDWGKKLLASCRHDWHQTDSLVVVTVYGQIPLPAFNWVKASQTELHIHIVFDGNRVFQAQMKLWGVVNVEQSSVSLMPSRVEISLVKADPGFWAQLEHPDALAEKSKSGVGLEMDEEESEDSDDDLSWTEEEEEAMGE", "length": 342, "header": "tr|I3LGH0-1|I3LGH0_PIG Isoform 1 of Integrin subunit beta 1 binding protein 2 OS=Sus scrofa OX=9823 GN=ITGB1BP2 PE=4 SV=2 CANONICAL=I3LGH0-1" }, "locus": { "chromosome": "X", "start_pos": 57321431, "end_pos": 57316879, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028651.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028651.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023164.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023164.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A061HUX1-1", "protein_name": "Integrin beta-1-binding protein 2", "gene_name": "Itgb1bp2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSLLCHNKGCGQHFDPNTNLPDSCHYHSGVPIFHDALKGWSCCRKRTVDFSEFLNIEGCTVGPHCAEKLPEVPQPEGPATSSLQEQKPLNTIPKSAETLLRERPKSEMPPKLLPLIISQALGVALEQKELDQEPGAGLDSSLIWTGSSCQNPGCDAVYQGPESDAAPCTYHPGAPRFHEGMKSWSCCGIQTLDFGAFLTQPGCRVGRHDWAKHLPASCRHDWHQTDSLVVLTVYGQIPLPAFNWVKASQTELQVHVVFDGNRVFQAQMKLWGVINVEQSSVSLMPSRVEISLVKADPGSWAQLEHPDSLAEKARAGVLLEMDEEESEGSDDDLSWTEEEEEEEEEEEAMGE", "length": 351 }, "evidence": [ { "id": "I3LGH0", "url": "https://omabrowser.org/oma/group/I3LGH0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3ZW59-1", "protein_name": "Integrin beta-1-binding protein 2", "gene_name": "Itgb1bp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLCYNKGCGQHFDPNTNLPDSCRYHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCAEKLPEVPQPEGPATSSLQEQKPLNTIPKSAETLLRERPKSEMPPKLLPLLISQALGVALEQKELDQEPGAGLDNSLIWTGSSCQNPGCDAVYQGPESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHDWAKQLPASCRHDWHQTDSLVVLTVYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQMKLWGVINVEQSSVSLMPSRVEISLVKADPGSWAQLEHPDSLAEKARAGVLLEMDEEESEDSDDDLSWTEEEDEDEEEAMGE", "length": 349 }, "evidence": [ { "id": "I3LGH0", "url": "https://omabrowser.org/oma/group/I3LGH0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BHP7-1", "protein_name": "Integrin beta-1-binding protein 2", "gene_name": "ITGB1BP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSLLCHNKGCGQHFDPQTNLPDSCYHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCAEKLPEVPQPEGPGTSSSLQEQRPPNVIPKSAETLRRERPKSELLPKLLPLNISQALEMALEQKELDQEPGAGVDSSLIRIGASCQNPGCDAVYQGLESDATPCTYHPGAPQFHEGVKSWSCCGIQTLDFGAFLAQPGCRVGRHDWGKQVPASCRHDWHQTDSLVVVTIYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQMKLWGVIDVEQSSVSLMPSRVEISLVKADPGSWAQLEHPDALAEKAKAKVGLEMDEEESEDSDDDLSWTEEEEEEEAMGE", "length": 348 }, "evidence": [ { "id": "I3LGH0", "url": "https://omabrowser.org/oma/group/I3LGH0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9R000-1", "protein_name": "Integrin beta-1-binding protein 2", "gene_name": "Itgb1bp2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSLLCYNKGCGQHFDPNTNLPDSCRYHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTVGLHCAEKLPEVPPQPEGPATSSLQEQKPLNTIPKSAETLFRERPKSEMPPKLLPLLISQALGVALEQKELDQEPGAGLDNSLIWTGSSCQNPGCDAVYQGPESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHDWAKQLPASCRHDWHQTDSVVVLTVYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQMKLWGVINVEQSSVSLMPSRVEISLVKADPGSWAQLEHPDSLAEKARAGVLLEMDEEESEDSDDDLSWTEEEDEEEEEAMGE", "length": 350 }, "evidence": [ { "id": "I3LGH0", "url": "https://omabrowser.org/oma/group/I3LGH0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "SH3 domain binding", "id": "GO:0017124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017124", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "integrin-mediated signaling pathway", "id": "GO:0007229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007229", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "pmid": "" }, { "name": "centrosome duplication", "id": "GO:0051298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051298", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Z disc", "id": "GO:0030018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030018", "evidence": [ { "database": "UniProtKB", "id": "I3LGH0", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 113, "end_pos": 115, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" }, { "id": "PS51401", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51401" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CHORD", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 60, "start_aa": "Met", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGH0" }, { "id": "PS51203", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51203" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CS", "eco_id": "ECO_0000259", "start_pos": 212, "end_pos": 301, "start_aa": "Leu", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 113, "end_pos": 115 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC60-1", "uniprot_ac": "I3LC60", "uniprot_id": "I3LC60_PIG", "mass": { "chemical_mass": 60586.0, "monoisotopic_mass": 60586.0 }, "refseq": { "ac": "XP_003129115", "name": "UDP-glucuronosyltransferase 2C1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129115" }, "gene_names": [ { "name": "LOC100515394", "type": "synonym", "evidence": [ { "id": "XP_003129115", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129115" } ] } ], "protein_names": [ { "name": "UDP-glucuronosyltransferase", "type": "recommended", "evidence": [ { "id": "I3LC60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC60/entry#names_and_taxonomy" } ] }, { "name": "2.4.1.17", "type": "synonym", "evidence": [ { "id": "I3LC60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC60/entry#names_and_taxonomy" } ] }, { "name": "UDP-glucuronosyltransferase 2C1", "type": "synonym", "evidence": [ { "id": "XP_003129115", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129115" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC60", "url": "https://www.uniprot.org/uniprotkb/I3LC60" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3LC60", "locus": {} } ], "crossref": [ { "id": "I3LC60", "url": "https://alphafold.ebi.ac.uk/entry/I3LC60", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000031919", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000031919", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03784", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03784", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100515394", "url": "https://www.ncbi.nlm.nih.gov/gene/100515394", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035595", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035595", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100515394", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515394", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LC60", "url": "https://www.orthodb.org/?gene=I3LC60", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48043", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48043", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48043:SF78", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48043:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00201", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00201", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003129115", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129115", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "21032", "url": "https://www.rhea-db.org/rhea/21032", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4FN87", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN87", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FN87-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FN87-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC60", "url": "https://www.uniprot.org/uniprotkb/I3LC60", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC60-1", "url": "https://www.uniprot.org/uniprotkb/I3LC60-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJ68", "url": "https://www.uniprot.org/uniprotkb/I3LJ68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJ68-1", "url": "https://www.uniprot.org/uniprotkb/I3LJ68-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKTVKGFCILFMLHLCFFDSARTGKILVWPVDFSHWINLKVILEELQVRGHEITILVPLPNLLLDHTKIPFNAEILQLPITKETLIEELNIILYTASFELQNLSWWNMQVELTKIVKRFSLTGKRVCDSAVTNKELLNRLQAAKFDVCIADPLSFCGELLAELLSIPFVYTFRFSYGYVLERSCAGLPMPSSYVPGSMSRLTDKMTFMQRLENWLLYTISDVLYSYYVFPEWDEYYSQVLGKPTTLCETMGKAEMWLIRTSWDFEFPYPSLPNLEFVGGLHCKPAKPLPKELEEFVQSSGKDGVIVFTLGSMIKNLTEEKSNMIASALAQIPQKVLWRYTGKKPETLGANTRLYEWIPQNDLLGHPQTRAFITHCGTNGIYEAIYHGIPMVGIPMFGDQHDNIARLKAKGAAVELNLHTMTSSDLLNALEAVINNPSYKENAMKLSRIHHDQPIKPLDRAVFWIEFVMRHKGAKHLRPASHDLTWYQYHSLDVIGFLLACVATIIFLVIKCFLFCCSKFGKTAKKKKRE", "length": 529, "header": "tr|I3LC60-1|I3LC60_PIG Isoform 1 of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN= PE=1 SV=3 CANONICAL=I3LC60-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FN87-1", "url": "https://www.uniprot.org/uniprotkb/I3LC60/entry#A0A8W4FN87-1", "sequence": { "sequence": "MKTVKGFCILFMLHLCFFDSARTGKILVWPVDFSHWINLKVILEELQVRGHEITILVPLPNLLLDHTKIPFNAEILQLPITKETLIEELNIILYTASFELQNLSWWNMQVELTKIVKRFSLTGKRVCDSAVTNKELLNRLQAAKFDVCIADPLSFCGELLAELLSIPFVYTFRFSYGYVLERSCAGLPMPSSYVPGSMSRLTDKMTFMQRLENWLLYTISDVLYSYYVFPEWDEYYSQVLGKPTTLCETMGKAEMWLIRTSWDFEFPYPSLPNLEFVGGLHCKPAKPLPKELEEFVQSSGKDGVIVFTLGSMIKNLTEEKSNMIASALAQIPQKVLWRYTGKKPETLGANTRLYEWIPQNDLLESESRKVPLHQALINFYMEY", "length": 383, "header": "tr|A0A8W4FN87-1|A0A8W4FN87_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=1 SV=1 CANONICAL=I3LC60-1" }, "locus": { "chromosome": "8", "start_pos": 66430706, "end_pos": 66414355, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094615.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094615.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080957.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080957.1" } ] } }, { "isoform_ac": "I3LC60-1", "url": "https://www.uniprot.org/uniprotkb/I3LC60/entry#I3LC60-1", "sequence": { "sequence": "MKTVKGFCILFMLHLCFFDSARTGKILVWPVDFSHWINLKVILEELQVRGHEITILVPLPNLLLDHTKIPFNAEILQLPITKETLIEELNIILYTASFELQNLSWWNMQVELTKIVKRFSLTGKRVCDSAVTNKELLNRLQAAKFDVCIADPLSFCGELLAELLSIPFVYTFRFSYGYVLERSCAGLPMPSSYVPGSMSRLTDKMTFMQRLENWLLYTISDVLYSYYVFPEWDEYYSQVLGKPTTLCETMGKAEMWLIRTSWDFEFPYPSLPNLEFVGGLHCKPAKPLPKELEEFVQSSGKDGVIVFTLGSMIKNLTEEKSNMIASALAQIPQKVLWRYTGKKPETLGANTRLYEWIPQNDLLGHPQTRAFITHCGTNGIYEAIYHGIPMVGIPMFGDQHDNIARLKAKGAAVELNLHTMTSSDLLNALEAVINNPSYKENAMKLSRIHHDQPIKPLDRAVFWIEFVMRHKGAKHLRPASHDLTWYQYHSLDVIGFLLACVATIIFLVIKCFLFCCSKFGKTAKKKKRE", "length": 529, "header": "tr|I3LC60-1|I3LC60_PIG Isoform 1 of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN= PE=1 SV=3 CANONICAL=I3LC60-1" }, "locus": { "chromosome": "8", "start_pos": 66430706, "end_pos": 66407926, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026903.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026903.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021633.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021633.3" } ] } }, { "isoform_ac": "I3LJ68-1", "url": "https://www.uniprot.org/uniprotkb/I3LC60/entry#I3LJ68-1", "sequence": { "sequence": "MKTVKGFCILFMLHLCFFDSARTGKILVWPVDFSHWINLKVILEELQVRGHEITILVPLPNLLLDHTKIPFNAEILQLPITKETLIEELNIILYTASFELQNLSWWNMQVELTKIVKRFSLTGKRVCDSAVTNKELLNRLQAAKFDVCIADPLSFCGELLAELLSIPFVYTFRFSYGYVLERSCAGLPMPSSYVPGSMSRLTDKMTFMQRLENWLLYTISDVLYSYYVFPEWDEYYSQVLGKPTTLCETMGKAEMWLIRTSWDFEFPYPSLPNLEFVGGLHCKPAKPLPKELEEFVQSSGKDGVIVFTLGSMIKNLTEEKSNMIASALAQIPQKVLWRYTGKKPETLGANTRLYEWIPQNDLLGHPQTRAFITHCGTNGIYEAIYHGIPMVGIPMFGDQHDNIARLKAKGAAVELNLHTMTSSDLLNALEAVINNPSYKENAMKLSRIHHDQPIKPLDRAVFWIEFVMRHKGAKHLRPASHDLTWYQVLGFLLCCKAHFTPSISFPMTHLNFPSVSTKHYVLSSI", "length": 525, "header": "tr|I3LJ68-1|I3LJ68_PIG Computationally mapped isoform of UDP-glucuronosyltransferase OS=Sus scrofa OX=9823 GN= PE=1 SV=3 CANONICAL=I3LC60-1" }, "locus": { "chromosome": "8", "start_pos": 66430706, "end_pos": 66407343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100077.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100077.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076195.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076195.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC60", "url": "https://www.uniprot.org/uniprotkb/I3LC60" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515394", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515394", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "UDP-glycosyltransferase activity", "id": "GO:0008194", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008194", "evidence": [ { "database": "UniProtKB", "id": "I3LC60", "url": "https://www.uniprot.org/uniprotkb/I3LC60" } ], "pmid": "" }, { "name": "glucuronosyltransferase activity", "id": "GO:0015020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015020", "evidence": [ { "database": "UniProtKB", "id": "I3LC60", "url": "https://www.uniprot.org/uniprotkb/I3LC60" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LC60", "url": "https://www.uniprot.org/uniprotkb/I3LC60" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 102, "end_pos": 104, "annotation": "n_glycosylation_sequon" }, { "start_pos": 315, "end_pos": 317, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21032", "name": "", "equation": "glucuronate acceptor + UDP-alpha-D-glucuronate = acceptor beta-D-glucuronoside + UDP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21032", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21032" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC60-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 529, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC60-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC60" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 102, "end_pos": 104 }, { "start_pos": 315, "end_pos": 317 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LD75-1", "uniprot_ac": "I3LD75", "uniprot_id": "I3LD75_PIG", "mass": { "chemical_mass": 45323.0, "monoisotopic_mass": 45323.0 }, "refseq": {}, "gene_names": [ { "name": "SIGIRR", "type": "recommended", "evidence": [ { "id": "I3LD75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ] } ], "protein_names": [ { "name": "Single Ig and TIR domain containing", "type": "synonym", "evidence": [ { "id": "I3LD75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD75/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SIGIRR", "url": "https://www.uniprot.org/uniprotkb/I3LD75", "locus": { "chromosome": "2", "start_pos": 223520, "end_pos": 230741, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024389", "url": "https://www.ensembl.org/id/ENSSSCG00000024389" } ] } } ], "crossref": [ { "id": "I3LD75", "url": "https://alphafold.ebi.ac.uk/entry/I3LD75", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024389", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024389", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00096", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00096", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000157", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000157", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015621", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015621", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035897", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035897", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WCTNNFR", "url": "https://omabrowser.org/oma/group/WCTNNFR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11890", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11890", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11890:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11890:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01582", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01582", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FPH1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPH1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LD75-1", "url": "https://www.uniprot.org/uniprotkb/I3LD75-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGVCDRALDFLSPSGNQVLGPALGSAVTLNCTASVVSGPHCPLPSVQWLKDGLPLGNGSHHDLHEDSWVKANWSEVLVSSVLGVNLTSTEDFGTFTCSIQNVSSSSFILRRAGLAGHVATVLASVMVLLALLLAALLYVKCRLNVLLWYQDKYGEVEMNDGKLYDAYVSYSDSPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLVVVLSDAFLGRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKELQLALPRKVQYRAMEGDPQTRLQDDKDPMLIVGGRGPEGRTLDPELDPDPEGDLGVRGPVFGEPAVPSHASGVSLGEGRGSEVDVSDLGSRNYSARTDFYCLVSEDDV", "length": 410, "header": "tr|I3LD75-1|I3LD75_PIG Isoform 1 of Single Ig and TIR domain containing OS=Sus scrofa OX=9823 GN=SIGIRR PE=3 SV=1 CANONICAL=I3LD75-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FPH1-1", "url": "https://www.uniprot.org/uniprotkb/I3LD75/entry#A0A8W4FPH1-1", "sequence": { "sequence": "MASRALDFLSPSGNQVLGPALGSAVTLNCTASVVSGPHCPLPSVQWLKDGLPLGNGSHHDLHEDSWVKANWSEVLVSSVLGVNLTSTEDFGTFTCSIQNVSSSSFILRRAGLAGHVATVLASVMVLLALLLAALLYVKCRLNVLLWYQDKYGEVEMNDGKLYDAYVSYSDSPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLVVVLSDAFLGRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKELQLALPRKVQYRAMEGDPQTRLQDDKDPMLIVGGRGPEGRTLDPELDPDPEGDLGVRGPVFGEPAVPSHASGVSLGEGRGSEVDVSDLGSRNYSARTDFYCLVSEDDV", "length": 407, "header": "tr|A0A8W4FPH1-1|A0A8W4FPH1_PIG Computationally mapped isoform of Single Ig and TIR domain containing OS=Sus scrofa OX=9823 GN=SIGIRR PE=3 SV=1 CANONICAL=I3LD75-1" }, "locus": { "chromosome": "2", "start_pos": 226662, "end_pos": 223694, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098052.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098052.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080823.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080823.1" } ] } }, { "isoform_ac": "I3LD75-1", "url": "https://www.uniprot.org/uniprotkb/I3LD75/entry#I3LD75-1", "sequence": { "sequence": "MAGVCDRALDFLSPSGNQVLGPALGSAVTLNCTASVVSGPHCPLPSVQWLKDGLPLGNGSHHDLHEDSWVKANWSEVLVSSVLGVNLTSTEDFGTFTCSIQNVSSSSFILRRAGLAGHVATVLASVMVLLALLLAALLYVKCRLNVLLWYQDKYGEVEMNDGKLYDAYVSYSDSPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLVVVLSDAFLGRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKELQLALPRKVQYRAMEGDPQTRLQDDKDPMLIVGGRGPEGRTLDPELDPDPEGDLGVRGPVFGEPAVPSHASGVSLGEGRGSEVDVSDLGSRNYSARTDFYCLVSEDDV", "length": 410, "header": "tr|I3LD75-1|I3LD75_PIG Isoform 1 of Single Ig and TIR domain containing OS=Sus scrofa OX=9823 GN=SIGIRR PE=3 SV=1 CANONICAL=I3LD75-1" }, "locus": { "chromosome": "2", "start_pos": 227388, "end_pos": 223694, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025225.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025225.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022004.1", "url": "https://www.ensembl.org/id/ENSSSCP00000022004.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 294, "start_aa": "Thr", "end_pos": 294, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr294", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MRG1-1", "protein_name": "Single Ig IL-1-related receptor", "gene_name": "Sigirr", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGVCDRALHFLSPPEDQALGPALGSAVALNCTAWVVSRPQCPQPSVQWLKDGLPLGNGSHFSLHQDFWVSANFSRVVSSVLVLNLTNAEDYGSFTCSVWNVSSHSFTLWKAGPAGHVVAVLASLLVLLVLLLVALLYVKCRLNVLLWYQDAYGEVEMNDGKLYDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLGRAWCSQSFREGLCRLLELTRRPIFITFEGQRREPIHPALRLLRQHRHLVTLLLWKPGSVAPSSDFWKELQLALPRKVQYRPVEGDPQTRLQDDKDPMLIVRGRAAQGRAMELDPDPEGDLGVRGPVFGEPPTPLHSSRVSEGEGHGSEMDVSDLGSRNYSARTDFYCLVSEDDV", "length": 407 }, "evidence": [ { "id": "I3LD75", "url": "https://omabrowser.org/oma/group/I3LD75/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q4V892-1", "protein_name": "Single Ig IL-1-related receptor", "gene_name": "Sigirr", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGVCDRVPNFLSPSEDQALGPALGSAVALNCTAWVFSRPQCPQPSVQWLKDGLALGNGSHFSLHQDFWVSDNFSEIVSSVLVFNLTKAEDYGTFTCSAWNVSSHSFTLWRAGPAGHVAAVLASLLVLVVLLLVALLYVKCRLNVLLWYQDTYGEVEMNDGKLYDAYVSYSDRPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLRRPWCSQSFREGLCRLLELTRRPIFITFEGQRREPIHPALRLLRQHRHLVTLLLWKPGSVTPSSDFWKELQLALPRKVQYRPVEGDPQTRLQDDKDPMLIVRGRAAQGRAMESELDPDPEGDLGVRGPVFGEPPTPLHESKVSIGEGHASEMDVSDLGSRNYSARTDFYCLVSEDDV", "length": 409 }, "evidence": [ { "id": "I3LD75", "url": "https://omabrowser.org/oma/group/I3LD75/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6IA17-1", "protein_name": "Single Ig IL-1-related receptor", "gene_name": "SIGIRR", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVAAVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM", "length": 410 }, "evidence": [ { "id": "I3LD75", "url": "https://omabrowser.org/oma/group/I3LD75/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JLZ8-1", "protein_name": "Single Ig IL-1-related receptor", "gene_name": "Sigirr", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGVCDMAPNFLSPSEDQALGLALGREVALNCTAWVFSRPQCPQPSVQWLKDGLALGNGSHFSLHEDFWVSANFSEIVSSVLVLNLTNAEDYGTFTCSVWNVSSHSFTLWRAGPAGHVAAVLASLLVLVVLLLVALLYVKCRLNMLLWYQDTYGEVEMNDGKLYDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRPWCSQSFREGLCRLLELTRRPIFITFEGQRREPIHPALRLLRQHRHLVTLVLWKPGSVTPSSDFWKELQLALPRKVQYRPVEGDPQTRLQDDKDPMLIVRGRAAQGRGMESELDPDPEGDLGVRGPVFGEPPTPLQETRICIGESHGSEMDVSDLGSRNYSARTDFYCLVSEDDV", "length": 409 }, "evidence": [ { "id": "I3LD75", "url": "https://omabrowser.org/oma/group/I3LD75/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ], "pmid": "" }, { "name": "negative regulation of interleukin-1-mediated signaling pathway", "id": "GO:2000660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000660", "evidence": [ { "database": "UniProtKB", "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ], "pmid": "" }, { "name": "cell surface receptor signaling pathway", "id": "GO:0007166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007166", "evidence": [ { "database": "UniProtKB", "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ], "pmid": "" }, { "name": "acute-phase response", "id": "GO:0006953", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006953", "evidence": [ { "database": "UniProtKB", "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ], "pmid": "" }, { "name": "negative regulation of chemokine production", "id": "GO:0032682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032682", "evidence": [ { "database": "UniProtKB", "id": "I3LD75", "url": "https://www.uniprot.org/uniprotkb/I3LD75" } ], "pmid": "" }, { "name": "negative regulation of Toll signaling 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"https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 14, "end_pos": 116, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LD75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD75" }, { "id": "PS50104", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50104" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TIR", "eco_id": "ECO_0000259", "start_pos": 163, "end_pos": 307, "start_aa": "Lys", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 294 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 102, "end_pos": 104 }, { "start_pos": 217, "end_pos": 219 }, { "start_pos": 31, "end_pos": 33 }, { "start_pos": 394, "end_pos": 396 }, { "start_pos": 58, "end_pos": 60 }, { "start_pos": 73, "end_pos": 75 }, { "start_pos": 86, "end_pos": 88 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", 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"mass": { "chemical_mass": 58366.0, "monoisotopic_mass": 58366.0 }, "refseq": { "ac": "XP_003353667", "name": "U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003353667" }, "gene_names": [ { "name": "PRPF4", "type": "recommended", "evidence": [ { "id": "I3LDL8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ] }, { "name": "PRPF4", "type": "synonym", "evidence": [ { "id": "XP_003353667", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003353667" } ] } ], "protein_names": [ { "name": "U4/U6 small nuclear ribonucleoprotein Prp4", "type": "recommended", "evidence": [ { "id": "I3LDL8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDL8/entry#names_and_taxonomy" } ] }, { "name": "U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003353667", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003353667" } ] }, { "name": "U4/U6 snRNP 60 kDa protein", "type": "synonym", "evidence": [ { "id": "I3LDL8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDL8/entry#names_and_taxonomy" } ] }, { "name": "WD splicing factor Prp4", "type": "synonym", "evidence": [ { "id": "I3LDL8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDL8/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays a role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex).", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8#function" }, { "database": "UniProtKB", "id": "ARBA00035603", "url": "https://www.uniprot.org/uniprotkb/ARBA00035603#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PRPF4", "url": "https://www.uniprot.org/uniprotkb/I3LDL8", "locus": { "chromosome": "1", "start_pos": 253925046, "end_pos": 253906717, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024648", "url": "https://www.ensembl.org/id/ENSSSCG00000024648" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024648", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024648", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00200", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00200", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100622501", "url": "https://www.ncbi.nlm.nih.gov/gene/100622501", 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"https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622501", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622501", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LNEPICY", "url": "https://omabrowser.org/oma/group/LNEPICY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LDL8", "url": "https://www.orthodb.org/?gene=I3LDL8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19846", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19846", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19846:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19846:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08799", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08799", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003353667", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003353667", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FQK2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQK2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDL8-1", "url": "https://www.uniprot.org/uniprotkb/I3LDL8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 521, "header": "tr|I3LDL8-1|I3LDL8_PIG Isoform 1 of U4/U6 small nuclear ribonucleoprotein Prp4 OS=Sus scrofa OX=9823 GN=PRPF4 PE=1 SV=2 CANONICAL=I3LDL8-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FQK2-1", "url": "https://www.uniprot.org/uniprotkb/I3LDL8/entry#A0A8W4FQK2-1", "sequence": { "sequence": "MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 491, "header": "tr|A0A8W4FQK2-1|A0A8W4FQK2_PIG Computationally mapped isoform of Pre-mRNA splicing tri-snRNP complex factor PRPF4 OS=Sus scrofa OX=9823 GN=PRPF4 PE=1 SV=1 CANONICAL=I3LDL8-1" }, "locus": { "chromosome": "1", "start_pos": 253923144, "end_pos": 253906795, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102524.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102524.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080674.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080674.1" } ] } }, { "isoform_ac": "I3LDL8-1", "url": "https://www.uniprot.org/uniprotkb/I3LDL8/entry#I3LDL8-1", "sequence": { "sequence": "MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 521, "header": "tr|I3LDL8-1|I3LDL8_PIG Isoform 1 of U4/U6 small nuclear ribonucleoprotein Prp4 OS=Sus scrofa OX=9823 GN=PRPF4 PE=1 SV=2 CANONICAL=I3LDL8-1" }, "locus": { "chromosome": "1", "start_pos": 253923144, "end_pos": 253906795, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032454.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032454.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022150.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022150.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622501", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622501", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AGK5-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein Prp4", "gene_name": "PRPF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRSLMICSRLLCSAPSAMPAASSPAATSDSSRCFLRLCGAERPRQGAPEAGRALAGRPHGSRAHLQVLPDAFELLDVVQLQLQPRRLPPQHHSTAAVSRPAPRGAPPLPPTKSKPSEEGDAPPAKRAPIFYGSLEEKERERLAKGESGLLGKEGMKAALEAGNINISSGEVFELEDHMSERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRSLKTARLWLANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE", "length": 621 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A7J8-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein Prp4", "gene_name": "Prpf4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASSRASSTTTKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 521 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HI03-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein Prp4", "gene_name": "Prpf4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 521 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O22212-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein PRP4-like protein", "gene_name": "LIS", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPNKDDNVSLAATAQISAPPVLQDASSLPGFSAIPPVVPPSFPPPMAPIPMMPHPPVARPPTFRPPVSQNGGVKTSDSDSESDDEHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTPKEEVDDEVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDIDL", "length": 554 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O43172-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein Prp4", "gene_name": "PRPF4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASSRASSTQATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 522 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P20053-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein PRP4", "gene_name": "PRP4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSKYIALENLPVDLQHKGATQNESTADILKQLPHERLQAVLEKIPEEDLEVRRLLSILKKPEVVENEDVQQRRIRLAEILMVDEIDLENINNMENINGEEVDEEDDEDFFTPATSELIFARRFLINYSLERSRKRLQKEMERHQKFNTRQELLSRRTELQRMANLELAGSQLVSTKPISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN", "length": 465 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q3MHE2-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein Prp4", "gene_name": "PRPF4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASTRPSSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGLLGKEGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPHSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 521 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54K20-1", "protein_name": "WD40 repeat-containing protein", "gene_name": "prpf4", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNKRIYFGAIKKENLKQKKDSINSIGSSGGGDEENQAEFLPFSKHTKRSQEQHQKVLDEYERKKRAKQVIVPTIDNLVKLKLRELLEPIILFGEKPEHRRSRLREILIERNIIDGTPLLISNKKEQEEQEQLEGSDEENFLTEGTEELKTARINISIYSLKKSQQRLLHLKKQREIELSIQKENDNLKNQFEEKQQKRIQKKLRLHQQLENDNMNIDEEEDDDDDDDGDDGDDLNMMVKIKTEFEKDMEYTVKELKNYYSSVSQIGDDRPLSMGVFSPDGKNVAIGSWSGVSKVWSVSGQKKQILAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKLWPLLNNDNNNNNNNNNDNEEEDNDATVSIETQPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDLTNSKILSTSFDKTWKIWSNDN", "length": 600 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9DAW6-1", "protein_name": "U4/U6 small nuclear ribonucleoprotein Prp4", "gene_name": "Prpf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRASSTTTKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE", "length": 521 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VVI0-1", "protein_name": "U4-U6 small nuclear riboprotein factor 60K", "gene_name": "U4-U6-60K", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDDDDIQYIKRQRTLHYGSLEESERKRQNAAASGAAATTTSGTTASSGAGTTTTGTGGQLEDIDSDEDYEESTKKTSNAKQAGAPPPTAATLANKIDDDYFDLEMEMERDKVALLEEFERKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGLGENAINKRQYEDEERKQQQREQDQATWYHEGPDSLRIARLWLADYSLPRAKDRLVRAREALEVPSAARAGRMVEMQKKLQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWSPDS", "length": 553 }, "evidence": [ { "id": "I3LDL8", "url": "https://omabrowser.org/oma/group/I3LDL8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "Cajal body", "id": "GO:0015030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015030", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "U4/U6 snRNP", "id": "GO:0071001", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071001", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "U4/U6 x U5 tri-snRNP complex", "id": "GO:0046540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046540", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "U2-type precatalytic spliceosome", "id": "GO:0071005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071005", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "U4 snRNA binding", "id": "GO:0030621", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030621", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" }, { "name": "U6 snRNA binding", "id": "GO:0017070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017070", "evidence": [ { "database": "UniProtKB", "id": "I3LDL8", "url": "https://www.uniprot.org/uniprotkb/I3LDL8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 182, "end_pos": 184, "annotation": "n_glycosylation_sequon" }, { "start_pos": 413, "end_pos": 415, "annotation": "n_glycosylation_sequon" }, { "start_pos": 65, "end_pos": 67, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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{ "start_pos": 65, "end_pos": 67 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LJX1-1", "uniprot_ac": "I3LJX1", "uniprot_id": "I3LJX1_PIG", "mass": { "chemical_mass": 57469.0, "monoisotopic_mass": 57469.0 }, "refseq": {}, "gene_names": [ { "name": "HYCC1", "type": "recommended", "evidence": [ { "id": "I3LJX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LJX1" } ] } ], "protein_names": [ { "name": "Hyccin PI4KA lipid kinase complex subunit 1", "type": "synonym", "evidence": [ { "id": "I3LJX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LJX1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LJX1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HYCC1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1", "locus": { "chromosome": "9", "start_pos": 91729060, "end_pos": 91821619, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015386", "url": "https://www.ensembl.org/id/ENSSSCG00000015386" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015386", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015386", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100620255", "url": "https://www.ncbi.nlm.nih.gov/gene/100620255", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR018619", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018619", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620255", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620255", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LPMKYQA", "url": "https://omabrowser.org/oma/group/LPMKYQA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SBZ3", "url": "https://www.orthodb.org/?gene=F1SBZ3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LJX1", "url": "https://www.orthodb.org/?gene=I3LJX1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31220", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31220", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31220:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31220:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09790", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09790", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SBZ3", "url": "https://www.uniprot.org/uniprotkb/F1SBZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBZ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SBZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJX1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJX1-1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFTSEKGVVEEWLSEFKTLPETSLPSYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLRFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHSKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRVPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIQASLPHGAMKSSKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGLSNSSQNCSNKTSVGKTQRRSGGSKTGGKEKETSGESCKDHFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAVGCGAGADSNRFSACSLQEEKLIYVSERTELPMKHQAGHQRPPSISITLSTD", "length": 521, "header": "tr|I3LJX1-1|I3LJX1_PIG Isoform 1 of Hyccin PI4KA lipid kinase complex subunit 1 OS=Sus scrofa OX=9823 GN=HYCC1 PE=3 SV=1 CANONICAL=I3LJX1-1" }, "isoforms": [ { "isoform_ac": "F1SBZ3-1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1/entry#F1SBZ3-1", "sequence": { "sequence": "MFTSEKGVVEEWLSEFKTLPETSLPSYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLRFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHSKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRVPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIQASLPHGAMKSSKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHEQPDSNNDTTELGILVIPEISVTNVAGERTGNGEKGRTLGEIDAQHLQGVQETATDPRTESKGLPEIRRQKSVRKMMEDGISSPGRVQF", "length": 419, "header": "tr|F1SBZ3-1|I3LJX1_PIG Computationally mapped isoform of Hyccin PI4KA lipid kinase complex subunit 1 OS=Sus scrofa OX=9823 GN=HYCC1 PE=3 SV=2 CANONICAL=I3LJX1-1" }, "locus": { "chromosome": "9", "start_pos": 91777138, "end_pos": 91735640, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016761.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016761.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016313.2", "url": "https://www.ensembl.org/id/ENSSSCP00000016313.2" } ] } }, { "isoform_ac": "I3LJX1-1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1/entry#I3LJX1-1", "sequence": { "sequence": "MFTSEKGVVEEWLSEFKTLPETSLPSYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLRFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHSKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRVPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIQASLPHGAMKSSKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGLSNSSQNCSNKTSVGKTQRRSGGSKTGGKEKETSGESCKDHFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAVGCGAGADSNRFSACSLQEEKLIYVSERTELPMKHQAGHQRPPSISITLSTD", "length": 521, "header": "tr|I3LJX1-1|I3LJX1_PIG Isoform 1 of Hyccin PI4KA lipid kinase complex subunit 1 OS=Sus scrofa OX=9823 GN=HYCC1 PE=3 SV=1 CANONICAL=I3LJX1-1" }, "locus": { "chromosome": "9", "start_pos": 91777138, "end_pos": 91734246, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022993.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022993.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024383.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024383.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 308, "start_aa": "Thr", "end_pos": 308, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr308", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBZ3", "url": "https://www.uniprot.org/uniprotkb/F1SBZ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620255", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620255", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LX28-1", "protein_name": "Hyccin PI4KA lipid kinase complex subunit 1", "gene_name": "HYCC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKEKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLRFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHSKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPRVSLQSLCQICSRICVCGYPRQHVRKYKGISSRVPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIQASLPHGAMRSSKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHENTELTGQEELMEISEVDEGFYSRAASSTSQSGLSNISQNCSNKTSIGKTQRRSGGNKTGGKEKETTGESCKDHFVRKQTQRAQSENLELLSLKRLTLTTSQSLPKPCSHGLAKTAASVFSKSFEQVSGVSVPHNPSSAVGCGAGTDANRFSACSLQEEKLIYTSERTELPMKHQAGQQRPPSISITLSTD", "length": 521 }, "evidence": [ { "id": "I3LJX1", "url": "https://omabrowser.org/oma/group/I3LJX1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8C2M6P7-1", "protein_name": "Hyccin isoform X1", "gene_name": "Fam126a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFTSEMGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLRFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHSKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHIRKYKGVSSRVPISSGFMVQMLTGVYFALYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPHGAMKSSKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGDTELTGQEELMEITEVDEGFYSRAASSTSQSGLSNSSHNCSNKTSVGKNQRRSGGSKAGAKERETAGESCRDHFARKQTQRAQSENLELLSLKRLTLTSSQSLPKPSSQGLAKTAATVFSKSFEQVSGVPVPRSPSPAVSCVAGADAHRFSACSLQEEKLTYVSERTELAMKYQAGPQGPPSISITLSAD", "length": 521 }, "evidence": [ { "id": "I3LJX1", "url": "https://omabrowser.org/oma/group/I3LJX1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0ABK0M1U5-1", "protein_name": "Hyccin PI4KA lipid kinase complex subunit 1", "gene_name": "Hycc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSLTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLRFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKHGHSKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYGGASSRIPISSGFMVQMLTGVYFAIYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPPGAMKSSKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGDTELTGQEELTEITEVDEGFYSRAASSTSQSGLSISSHNCSHKTSVGKNQRRSGGSKAGAKERETAGESCRDHFARKQTQRAQSENLELLSLKRLTLTSSQSLPKPSSHGLAQTAATVFSKSFEQVSGVPGPRSPSPAIGCVAGADAHRFSACSLQEEKLIYGSERIDLPLKCQAGQRGPPSVSITLSAD", "length": 508 }, "evidence": [ { "id": "I3LJX1", "url": "https://omabrowser.org/oma/group/I3LJX1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6P9N1-1", "protein_name": "Hyccin", "gene_name": "Hycc1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFTSEIGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVTSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLRFTLQFLPELMWCYLAVSASRDVHSSGCIEALLLGVYNLEIVDKHGHSKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYRGVSSRIPISSGFMVQMLTGVYFAIYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPHGAMKSSKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGDTELTGQEELMDITEVDEGFYSRAASSTSQSGLSNSSHNCSNKTSVGKNQRRSGGSKAGAKERETAGESCRDHFARKQTQRAQSENLELLSLKRLTLTSSQSLPKPSSQGLAKTAATVFSKSFEQVSGAPVPRSPSPAIGCVAGADANRFSACSLQEEKLIYVSERTELAVKCQAGQQGPPSISVTLSAE", "length": 521 }, "evidence": [ { "id": "I3LJX1", "url": "https://omabrowser.org/oma/group/I3LJX1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BYI3-1", "protein_name": "Hyccin", "gene_name": "HYCC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFTSEKGVVEEWLSEFKTLPETSLPNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHTKVLSFTIPSLSKPSVYHEPSSIGSMALTESALSQHGLSKVVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGISSRIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPHGPMKSNKEGTRCIQVEITPTSSRISRNAVTSMSIRGHRWKRHGNTELTGQEELMEISEVDEGFYSRAASSTSQSGLSNSSHNCSNKPSIGKNHRRSGGSKTGGKEKETTGESCKDHFARKQTQRAQSENLELLSLKRLTLTTSQSLPKPSSHGLAKTAATVFSKSFEQVSGVTVPHNPSSAVGCGAGTDANRFSACSLQEEKLIYVSERTELPMKHQSGQQRPPSISITLSTD", "length": 521 }, "evidence": [ { "id": "I3LJX1", "url": "https://omabrowser.org/oma/group/I3LJX1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LJX1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LJX1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein localization to plasma membrane", "id": "GO:0072659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072659", "evidence": [ { "database": "UniProtKB", "id": "I3LJX1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1" } ], "pmid": "" }, { "name": "phosphatidylinositol phosphate biosynthetic process", "id": "GO:0046854", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046854", "evidence": [ { "database": "UniProtKB", "id": "I3LJX1", "url": "https://www.uniprot.org/uniprotkb/I3LJX1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 370, "end_pos": 372, "annotation": "n_glycosylation_sequon" }, { "start_pos": 373, "end_pos": 375, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 308 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 366, "end_pos": 368 }, { "start_pos": 370, "end_pos": 372 }, { "start_pos": 373, "end_pos": 375 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LCF2-1", "uniprot_ac": "I3LCF2", "uniprot_id": "I3LCF2_PIG", "mass": { "chemical_mass": 152268.0, "monoisotopic_mass": 152268.0 }, "refseq": {}, "gene_names": [ { "name": "CASKIN1", "type": "recommended", "evidence": [ { "id": "I3LCF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF2" } ] } ], "protein_names": [ { "name": "Caskin-1", "type": "recommended", "evidence": [ { "id": "I3LCF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF2/entry#names_and_taxonomy" } ] }, { "name": "CASK-interacting protein 1", "type": "synonym", "evidence": [ { "id": "I3LCF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCF2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May link the scaffolding protein CASK to downstream intracellular effectors.", "evidence": [ { "database": "UniProtKB", "id": "I3LCF2", "url": "https://www.uniprot.org/uniprotkb/I3LCF2#function" }, { "database": "UniProtKB", "id": "ARBA00055074", "url": "https://www.uniprot.org/uniprotkb/ARBA00055074#function" } ] }, { "annotation": "Plays a central role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the pachytene stage to facilitate the production of multiple types of piRNAs, including those associated with repeats involved in the regulation of retrotransposons. May act by mediating protein-protein interactions during germ cell maturation.", "evidence": [ { "database": "UniProtKB", "id": "I3L7B5", "url": "https://www.uniprot.org/uniprotkb/I3L7B5#function" }, { "database": "UniProtKB", "id": "ARBA00025297", "url": "https://www.uniprot.org/uniprotkb/ARBA00025297#function" }, { "database": "UniProtKB", "id": "I3LCF2", "url": "https://www.uniprot.org/uniprotkb/I3LCF2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCF2", "url": "https://www.uniprot.org/uniprotkb/I3LCF2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CASKIN1", "url": "https://www.uniprot.org/uniprotkb/I3LCF2", "locus": { "chromosome": "3", "start_pos": 39811009, "end_pos": 39794293, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000033059", "url": "https://www.ensembl.org/id/ENSSSCG00000033059" } ] } } ], "crossref": [ { "id": "ENSSSCG00000033059", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000033059", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09497", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09497", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd09498", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09498", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12062", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12062", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001660", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001660", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032117", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032117", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033635", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033635", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035495", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035495", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035497", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035497", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035498", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035498", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24174", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24174", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24174:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24174:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07653", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07653", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16600", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16600", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16632", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16632", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16907", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16907", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L7B5", "url": "https://www.uniprot.org/uniprotkb/I3L7B5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7B5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7B5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCF2", "url": "https://www.uniprot.org/uniprotkb/I3LCF2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCF2-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNGNTELITLLLEAQAAVDIKDNKGKARMRPLHYAAWQGRKEPMKLVLKAGSAVNIPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDATDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTEVVRLLLDNGINAHVRNTYSQTALDIVHQFTTSQASKEIKQLLREASAALQVRATKDYCNNYDLTSLNVKAGDIITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSLGEAIVKRAGKSRAGAESSPLQGGSSSGPSAPPEEIWVLRKPFAGGDRSGSLSGVAGGRSSGGHTLHAGAEGVKLLATVLSQKPVSDSGPGDSAVKPPESSAGATRSQPPVAHAGQVYGEQPPKKLEAASEGKSAEAVGQWLATFQLQLYAPNFISAGYDLPTISRMTPEDLTAIGVTKPGHRKKITAEISGLSIPDWLPERKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVRKLAELQKAEYAKYEGGPVRRKAPQSLEVMTIESPPPPEPAPAECQSPKMTTFQDSELSGELQAAMTGPAEGAAATAAAAAAATAAATATAEKPSNHLPPTPRASMRQEPSLGGRARHMSSSQELLGDGPPGPGSPMSRSQEYLLDEGPTPDTPQREARPSRHGHSVKRASVPPVPGKPRQVLPPAASHFTPPQTPTKARPASPQALGGPHGPAPATAKVKPTPQLLPPAERPMSPRSLPQSPTHRGFAYVLPQPVESEAGPAVPGPVPTAVPTPVPTLCLPPEAEVEPGRPKKRAHSLNRYAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSAMASANLADESAPDAEAEGAGTEDGRLGVRAQRRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRAARRPPEGHPVPRPASPEPGRVATVLASVKHKEAIGPDGEVVNRRRTLSGPVTGLLATARRGPGESGGPADHGRFVEDGAARQRPRGPAKGEAGAEGPPLARVEASATLQRRIRAKQSQQENVKFLLTESDTVKRRPKAKERETGPEPPPPLSVYQTGTGTVHRPLASEQAGPPELPPPPPPAEPPPSDLMQLPPLPPLDSDARKPAKPPVSPKPILAQPVPKIQSSPTPASKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPAKAAAGLQSGSASPSPAPSPARQPPPALAKSASTPPPPLSASPARPPSPGAPALHVPAKPPRAAAVAAGPPAVPDSASPGDSARQKLEETSACLAAALQAVEEKIRQEDAQGSRPSAAEEKSTGSILDDIGSMFDDLADQLDAMLE", "length": 1456, "header": "tr|I3LCF2-1|I3LCF2_PIG Isoform 1 of Caskin-1 OS=Sus scrofa OX=9823 GN=CASKIN1 PE=4 SV=3 CANONICAL=I3LCF2-1" }, "isoforms": [ { "isoform_ac": "I3L7B5-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF2/entry#I3L7B5-1", "sequence": { "sequence": 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"length": 1385, "header": "tr|I3L7B5-1|I3LCF2_PIG Computationally mapped isoform of Caskin-1 OS=Sus scrofa OX=9823 GN=CASKIN1 PE=4 SV=3 CANONICAL=I3LCF2-1" }, "locus": { "chromosome": "3", "start_pos": 39810005, "end_pos": 39794492, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027239.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027239.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019920.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019920.3" } ] } }, { "isoform_ac": "I3LCF2-1", "url": "https://www.uniprot.org/uniprotkb/I3LCF2/entry#I3LCF2-1", "sequence": { "sequence": "MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNGNTELITLLLEAQAAVDIKDNKGKARMRPLHYAAWQGRKEPMKLVLKAGSAVNIPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDATDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTEVVRLLLDNGINAHVRNTYSQTALDIVHQFTTSQASKEIKQLLREASAALQVRATKDYCNNYDLTSLNVKAGDIITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSLGEAIVKRAGKSRAGAESSPLQGGSSSGPSAPPEEIWVLRKPFAGGDRSGSLSGVAGGRSSGGHTLHAGAEGVKLLATVLSQKPVSDSGPGDSAVKPPESSAGATRSQPPVAHAGQVYGEQPPKKLEAASEGKSAEAVGQWLATFQLQLYAPNFISAGYDLPTISRMTPEDLTAIGVTKPGHRKKITAEISGLSIPDWLPERKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVRKLAELQKAEYAKYEGGPVRRKAPQSLEVMTIESPPPPEPAPAECQSPKMTTFQDSELSGELQAAMTGPAEGAAATAAAAAAATAAATATAEKPSNHLPPTPRASMRQEPSLGGRARHMSSSQELLGDGPPGPGSPMSRSQEYLLDEGPTPDTPQREARPSRHGHSVKRASVPPVPGKPRQVLPPAASHFTPPQTPTKARPASPQALGGPHGPAPATAKVKPTPQLLPPAERPMSPRSLPQSPTHRGFAYVLPQPVESEAGPAVPGPVPTAVPTPVPTLCLPPEAEVEPGRPKKRAHSLNRYAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSAMASANLADESAPDAEAEGAGTEDGRLGVRAQRRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRAARRPPEGHPVPRPASPEPGRVATVLASVKHKEAIGPDGEVVNRRRTLSGPVTGLLATARRGPGESGGPADHGRFVEDGAARQRPRGPAKGEAGAEGPPLARVEASATLQRRIRAKQSQQENVKFLLTESDTVKRRPKAKERETGPEPPPPLSVYQTGTGTVHRPLASEQAGPPELPPPPPPAEPPPSDLMQLPPLPPLDSDARKPAKPPVSPKPILAQPVPKIQSSPTPASKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPAKAAAGLQSGSASPSPAPSPARQPPPALAKSASTPPPPLSASPARPPSPGAPALHVPAKPPRAAAVAAGPPAVPDSASPGDSARQKLEETSACLAAALQAVEEKIRQEDAQGSRPSAAEEKSTGSILDDIGSMFDDLADQLDAMLE", "length": 1456, "header": "tr|I3LCF2-1|I3LCF2_PIG Isoform 1 of Caskin-1 OS=Sus scrofa OX=9823 GN=CASKIN1 PE=4 SV=3 CANONICAL=I3LCF2-1" }, "locus": { "chromosome": "3", "start_pos": 39810005, "end_pos": 39794492, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026424.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026424.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021727.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021727.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1271, "start_aa": "Thr", "end_pos": 1271, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1271", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1306, "start_aa": "Thr", "end_pos": 1306, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1306", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 753, "start_aa": "Thr", "end_pos": 753, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr753", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 826, "start_aa": "Thr", "end_pos": 826, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr826", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7B5", "url": "https://www.uniprot.org/uniprotkb/I3L7B5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "I3LCF2", "url": "https://www.uniprot.org/uniprotkb/I3LCF2" } ], "pmid": "" }, { "name": "cytoplasm", "id": 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"url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518180", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518180", "resource": "KEGG Pathway" }, { "id": "R-SSC-913709", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913709", "resource": "Reactome", "description": "O-linked glycosylation of mucins" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6ARU0-1", "protein_name": "Glucosaminyl (N-acetyl) transferase 4", "gene_name": "Gcnt4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKILRCCFKYTLQQKVFILFLTLWLFSLLKLLNVGRLLFPQRDIYLVEYSLSTSPFVRNRFPDTGDAARDAVNCSGVYEHEPLEIGKSLEIRRRNIIDLEDGDVAVMTSDCDIYQTLRQYHEKPVSRVEEDFPIAYSLVVHKDAIMVERLIRAIYNQHNLYCIHYDLKSPDAFKAAMNNLAKCFSNIFIASKLEAVEYAHISRLQADWNCLSDLLKSSVQWKYVINLCGQDFPLKSNFELVTELKKLRGRNMLETVRPPTGKMERFTYHHELRQVPYEYMKLPVKTNVSKGAPPHDIEVFVGSAYFVLSQAFVKYIFNSSLVKDFFAWSKDTYSPDEHFWATLIRIPGIPGGISRSSQDVSDLQSKTRLVKWNYYEGFFYPNCTGSHLRSVCIYGAAELRWLIKEGHWFANKFDSKVDPVLIKCLAEKLEEQQRKLIALSSEKSITEGNPKATHKITTGLRASDTES", "length": 467 }, "evidence": [ { "id": "I3LAJ3", "url": "https://omabrowser.org/oma/group/I3LAJ3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1C421-1", "protein_name": "Glucosaminyl (N-acetyl) transferase 4", "gene_name": "GCNT4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKRHKFPYRCPTRRKILILCFTGWVIALLKLLHVERHFFPPKSIYLVEHFLSTSSYVRNRYSYLRNHFQYEINCSSIYEQDPQEIGKSLEIRRKDIIDLDDEDIIAMTNDCDMYRALRKYHLIPVSPEEESFPIAYSFVVHKDAVMVERLIHSLYSHQNIYCIHYDQKAAKSFKSAMSNLAKCFPNIFIASKLEMVNYAHISRLQADLNCLSDLMDSAVPWKYVINLCGQDFPLRSNFQLVAELKKLDGANMLETIKPSSSKRERFTYHYELMKVPYEYMQMPVKTNISKNPPPHNIEVFVGSAYFVLSRAFIQYTLSSSLVKDFFDWSRDTYSPDEHFWATLVRVPGVPGELSRSAQDITDLQSKTRLVKWNYLEDHLYPPCTGTHLRSVCIYGAAELRWLMNYGHWFANKFDSKVDPVLVKCLAEKLAEQQKEWVYLSSDKYFLRINPANASL", "length": 455 }, "evidence": [ { "id": "I3LAJ3", "url": "https://omabrowser.org/oma/group/I3LAJ3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E9Q649-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "Gcnt4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"MKIFKCYFKHTLQQKVFILFLTLWLLSLLKLLNVRRLFPQKDIYLVEYSLSTSPFVRNRYTHVKDEVRYEVNCSGIYEQEPLEIGKSLEIRRRDIIDLEDDDVVAMTSDCDIYQTLRGYAQKLVSKEEKSFPIAYSLVVHKDAIMVERLIHAIYNQHNIYCIHYDRKAPDTFKVAMNNLAKCFSNIFIASKLEAVEYAHISRLQADLNCLSDLLKSSIQWKYVINLCGQDFPLKSNFELVSELKKLNGANMLETVKPPNSKLERFTYHHELRRVPYEYVKLPIRTNISKEAPPHNIQIFVGSAYFVLSQAFVKYIFNNSIVQDFFAWSKDTYSPDEHFWATLIRVPGIPGEISRSAQDVSDLQSKTRLVKWNYYEGFFYPSCTGSHLRSVCIYGAAELRWLIKDGHWFANKFDSKVDPILIKCLAEKLEEQQRDWITLPSEKLFMDRNLTTTS", "length": 453 }, "evidence": [ { "id": "I3LAJ3", "url": "https://omabrowser.org/oma/group/I3LAJ3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "I3LAJ3", "url": "https://www.uniprot.org/uniprotkb/I3LAJ3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "acetylglucosaminyltransferase activity", "id": "GO:0008375", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008375", "evidence": [ { "database": "UniProtKB", "id": "I3LAJ3", "url": "https://www.uniprot.org/uniprotkb/I3LAJ3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 248, "end_pos": 250, "annotation": "n_glycosylation_sequon" }, { "start_pos": 287, "end_pos": 289, "annotation": "n_glycosylation_sequon" }, { "start_pos": 318, "end_pos": 320, "annotation": "n_glycosylation_sequon" }, { "start_pos": 73, "end_pos": 75, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { 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0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LAS0-1", "uniprot_ac": "I3LAS0", "uniprot_id": "I3LAS0_PIG", "mass": { "chemical_mass": 64869.0, "monoisotopic_mass": 64869.0 }, "refseq": { "ac": "XP_020925781", "name": "GPI mannosyltransferase 4 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925781" }, "gene_names": [ { "name": "PIGZ", "type": "recommended", "evidence": [ { "id": "I3LAS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAS0" } ] }, { "name": "PIGZ", "type": "synonym", "evidence": [ { "id": "XP_020925781", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925781" } ] } ], "protein_names": [ { "name": "Mannosyltransferase", "type": "recommended", "evidence": [ { "id": "I3LAS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAS0/entry#names_and_taxonomy" } ] }, { "name": "2.4.1.-", "type": "synonym", "evidence": [ { "id": "I3LAS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAS0/entry#names_and_taxonomy" } ] }, { "name": "GPI mannosyltransferase 4 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020925781", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925781" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LAS0", "url": "https://www.uniprot.org/uniprotkb/I3LAS0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PIGZ", "url": "https://www.uniprot.org/uniprotkb/I3LAS0", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000029291", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029291", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524712", "url": "https://www.ncbi.nlm.nih.gov/gene/100524712", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HGIHPRY", "url": "https://omabrowser.org/oma/group/HGIHPRY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22760", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22760", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22760:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22760:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03901", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03901", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-162710", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162710", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020925781", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925781", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LAS0", "url": "https://www.uniprot.org/uniprotkb/I3LAS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAS0-1", "url": "https://www.uniprot.org/uniprotkb/I3LAS0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQICGTRIASVAAEVILGSGPVSWQQFDMKTAARMLWGSLSLLRLVWCLLPQTGYVHPDEFFQSPEVMAEDILGIEAARPWEFQPSSPCRTVVFPLLTSGSAFWLLRLWEEWGPWPGPVSGYVLLVGPRLLLTTLSFALDVAVYHLAPRWGAERWSALVLLSGSYVTLVFYTRTFSNAIEGLLFAWLLVLVSPRVAGSPTPEKPAPGPWWHSWLLGGIVAAGFFNRPTFLAFALVPLFLWGTYGPTSPSFRSLTKEALVLLPGAALTAAVFVAVDSWYFSSPSRPRTLILTPANFLRYNLDPVNLARHGTHMQLTHLAVNGFLLFGVLHAHALQAAWRQLRACLQAFARVGFLRALDAWRLQSRSHLLLIYFTPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPAPCKGTLALFNALGALFFGCLHQGGLVPGLGHLERVVHAPVLPHVSTRYTLLFTHTYMPPRHLLHLPGLGSPVEVVDMAGSEDWLLCQALNNFTRQPACQVAGGPWLCRLFVVTPGTTRPAVKKCSFPLKNEALIFPHLTLEDPPALSSLLSGAWREHLSLHILELGEQPDNMTADPLAGTQP", "length": 589, "header": "tr|I3LAS0-1|I3LAS0_PIG Isoform 1 of Mannosyltransferase OS=Sus scrofa OX=9823 GN=PIGZ PE=3 SV=2 CANONICAL=I3LAS0-1" }, "isoforms": [ { "isoform_ac": "I3LAS0-1", "url": "https://www.uniprot.org/uniprotkb/I3LAS0/entry#I3LAS0-1", "sequence": { "sequence": "MQICGTRIASVAAEVILGSGPVSWQQFDMKTAARMLWGSLSLLRLVWCLLPQTGYVHPDEFFQSPEVMAEDILGIEAARPWEFQPSSPCRTVVFPLLTSGSAFWLLRLWEEWGPWPGPVSGYVLLVGPRLLLTTLSFALDVAVYHLAPRWGAERWSALVLLSGSYVTLVFYTRTFSNAIEGLLFAWLLVLVSPRVAGSPTPEKPAPGPWWHSWLLGGIVAAGFFNRPTFLAFALVPLFLWGTYGPTSPSFRSLTKEALVLLPGAALTAAVFVAVDSWYFSSPSRPRTLILTPANFLRYNLDPVNLARHGTHMQLTHLAVNGFLLFGVLHAHALQAAWRQLRACLQAFARVGFLRALDAWRLQSRSHLLLIYFTPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPAPCKGTLALFNALGALFFGCLHQGGLVPGLGHLERVVHAPVLPHVSTRYTLLFTHTYMPPRHLLHLPGLGSPVEVVDMAGSEDWLLCQALNNFTRQPACQVAGGPWLCRLFVVTPGTTRPAVKKCSFPLKNEALIFPHLTLEDPPALSSLLSGAWREHLSLHILELGEQPDNMTADPLAGTQP", "length": 589, "header": "tr|I3LAS0-1|I3LAS0_PIG Isoform 1 of Mannosyltransferase OS=Sus scrofa OX=9823 GN=PIGZ PE=3 SV=2 CANONICAL=I3LAS0-1" }, "locus": { "chromosome": "13", "start_pos": 133178081, "end_pos": 133172379, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025717.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025717.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021138.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021138.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 200, "start_aa": "Thr", "end_pos": 200, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr200", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 246, "start_aa": "Thr", "end_pos": 246, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr246", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LAS0", "url": "https://www.uniprot.org/uniprotkb/I3LAS0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-162710", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162710", "resource": "Reactome", "description": "Synthesis of glycosylphosphatidylinositol (GPI)" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M9U5-1", "protein_name": "Mannosyltransferase", "gene_name": "Pigz", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKMAARVIWGSLSLLRVLWCLLPQTGYIHPDEFFQSPEVMAEDILGVQASRPWEFYPSNSCRTVVFPLLTSGSTFWLLRLWEELGPWPGLVSGYKLLVGPRLLLTTLSFALDWAMYYLAPLWGADRWNAMCLLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSPYVAWSPTSKKPTPGPWWHSCLLGAIVAAGFFNRPTFLAFALAPLSLWGIHRALEPGIKALTQEALVLLPGAVLAAVLFITMDSWYFSSLSRSSGLVLTPVNFLYYNLDPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQQLHSCLHAVAQTGLLRARGPQGLLPSSKSYLLLLYFTPLVLLSAFSHQEARFLIPLIVPLILLCSPQTQPIPWRGTLVLFNALGALIFGCLHQGGLVPGLKYLEHVVHAPVLPGRATHYTLLFTHTYMPPQHLLHLSGLGSPVEVVDMAGAEDRVLCQALNNFSRQPGCQQAGGPQLCRLFVVTPGTNRHALEKCSFSLKNETLLFPHLTLEDPPALSSLLSGAWRTHLSLHVIELEEKPVMTKQPWPKIQP", "length": 562 }, "evidence": [ { "id": "I3LAS0", "url": "https://omabrowser.org/oma/group/I3LAS0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BCR7-1", "protein_name": "Mannosyltransferase", "gene_name": "PIGZ", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEMEARVLWGSLGLLRLVWCLLPQTGYVHPDEFFQSPEVMAGDILGIEAARPWEFHPSSPCRTAVFPLLTSGSAFWLLRLWEEWGPWPGVVSGYLLLVGPRLLLTALSFALDLAVYHLAPGWGAERWNALLLLSGSYVTLVFYTRTFSNAIEGLLFAWLLVLVSPRAARSRTPRKPAPGPRWHGWLLGGLVVAGFFNRPTFLAFALVPLFLWGTCGATDPSFKSLTQQALTLLPGASLTAVAFVAVDSWYFSGPSRPSTLVLTPANFLRYNLDPVNLARHGTHARLTHLAVNGFLLFGMLHAHSLQAAWQQLRAGLQAFAQMGFPRTLEAWSPRPSPRSLLLLFYFVPLALLSAFSHQEARFLIPLLVPLVLLCSLQTQPAPCRGTLALFNVLGALFFGCLHQGGLVPGLGHLERVVHAPEPLRVPTHFTLVFTHTYMPPRHLLHLPGLGLPVDVVDMGGAEDWVLCQALNNFTRHAACQAAGGPWLCRLFVVTPGTTRPAVRKCRFPLKSETLIFPHLTLEDPPALSSLLSSAWRDHLSLHILELGEKPDNMTQKPLPKTQP", "length": 563 }, "evidence": [ { "id": "I3LAS0", "url": "https://omabrowser.org/oma/group/I3LAS0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q1ZXB4-1", "protein_name": "Mannosyltransferase", "gene_name": "smp3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLKKVILSILYNLKNVIFNRNNNYNNNNKNKIPLPNSYCISILIRFIVGVLAIGYIHPDEYFQSPEITSSFMFNFKTFTPWEFNDSNPCRSVVIPFNLSHRKSLSILSSCWLIIIFHSRTFSNTIESLLVATLLTIILLYKKSISKGENTFFKDLLIGIIVSCGIFARFTFIFFATPLGIYLLYLLFQSSSSSSSATKSSINNNSNNGCKKFTKSKLSCIISIILIIFGFLIASSFFIIIDSIYFNYLDHLKLISDFNLITSNINTSDLFLSSNSTIDIINQISNIPKHPLISDLNSTHIISFLKNNLTYTPINSFLYNLDVDNLSDHGIHNRLTHLFVNLPMMVGPLVLLLFIEIISILKNGFNVNKQTNNVNNNNNNTNNNNNNNNNTNNNNNDNHNHSGIDNGSIKRNHHSSSSLSQSSTSPSNRKEVFPISIRILLVSIILFGLFFLSLAPHQEPRFLLPLFFPLALLSYRYFYFNKKSSKLLLILWILFNMILTIFFGFVHQGGVTPSLVYIGSKIVKPQQQQQYLLLGEIENNLNITNSNINNNKINNENLQKSNNKLNNITIMFYHTYMPPRYLLGIERNNEKINLLDLGGKDINSLKNLVDEIKGSKIFILSPTKDILYQQYKDKTCQLTESFWPHLTTEDPPQSIDELRLFMFECNDL", "length": 667 }, "evidence": [ { "id": "I3LAS0", "url": "https://omabrowser.org/oma/group/I3LAS0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86VD9-1", "protein_name": "GPI alpha-1,2-mannosyltransferase 4", "gene_name": "PIGZ", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQICGSSVASVAAGTSFQVLGPVCWQQLDLKMAVRVLWGGLSLLRVLWCLLPQTGYVHPDEFFQSPEVMAEDILGVQAARPWEFYPSSSCRSVLFPLLISGSTFWLLRLWEELGPWPGLVSGYALLVGPRLLLTALSFALDGAVYHLAPPMGADRWNALALLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSSHVTWGPTRKEPAPGPRWRSWLLGGIVAAGFFNRPTFLAFAVVPLYLWGTRGATNPGLKSLTREALVLLPGAALTAAVFVATDSWYFSSPATSRNLVLTPVNFLHYNLNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQRLQVGLQASAQMGLLRALGARSLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLVPLVLLCSPQTQPVPWKGTVVLFNALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMPPRHLLHLPGLGAPVEVVDMGGTEDWALCQTLKSFTRQPACQVAGGPWLCRLFVVTPGTTRRAVEKCSFPFKNETLLFPHLTLEDPPALSSLLSGAWRDHLSLHIVELGEET", "length": 579 }, "evidence": [ { "id": "I3LAS0", "url": "https://omabrowser.org/oma/group/I3LAS0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BTP0-1", "protein_name": "GPI alpha-1,2-mannosyltransferase 4", "gene_name": "Pigz", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMVAAQVIWGSFSLLRVLWCLLPQTGYIHPDEFFQSPEVMAEDILGVQATRPWEFYPSSSCRTVVFPLLTSGSTFWLLRLWEELGLWPGLVSGYMLLVGPRFLLTALSFALDWAVYDLAPLWGADRWNALCLLSGSYVTLVFYTRTFSNTIEGLLFTWLLVLVSPGVVRSPTSKKPTPGPRWHRYLLGVILAAGFFNRPTFLAFALAPLSLWGIHRASELGGIRALIQEALVLLPGAALAAVLCVATDSWYFSSLSRSTGVFLTPANFLYYNLDPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQQLHACLRASPQTGLSRVRGARGLLSSSKSYLLLFYFTPLLLLSAFSHQEARFLIPLLVPLVLLCSPQTQPIPWKGTLVLFNILGALIFGCLHQGGLVPGLKYLEQIVHTPDLSGTTTHYTLLFTHTYMPPQHLLHLSGLGSPVEVVDMGGAEDRVLCQALNNFSRQPACQLAGEPWPCRLFVVTPGTNRHALEKCRFPLKNETLLFPHLTLEDPPALSSLLSGAWRKHLSLHVIELETPVVTKQPKAQP", "length": 560 }, "evidence": [ { "id": "I3LAS0", "url": "https://omabrowser.org/oma/group/I3LAS0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LAS0", "url": "https://www.uniprot.org/uniprotkb/I3LAS0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "alpha-1,2-mannosyltransferase activity", "id": "GO:0000026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000026", "evidence": [ { "database": "UniProtKB", "id": "I3LAS0", "url": "https://www.uniprot.org/uniprotkb/I3LAS0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "GPI anchor biosynthetic process", "id": "GO:0006506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006506", "evidence": [ { "database": "UniProtKB", "id": "I3LAS0", "url": "https://www.uniprot.org/uniprotkb/I3LAS0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 498, "end_pos": 500, "annotation": "n_glycosylation_sequon" }, { "start_pos": 578, "end_pos": 580, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-162797", "name": "mannose (a1-2) mannose (a1-6) (ethanolamineP) mannose (a1-4) glucosaminyl-acyl-PI -> mannose (a1) mannose (a1-2) mannose (a1-6) (ethanolamineP) mannose (a1-4) glucosaminyl-acyl-PI", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [ "R-ALL-8855664" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-162797", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162797" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-8855664", "participant_name": "mannose (a1) mannose (a1-2) mannose (a1-6) (ethanolamineP) mannose (a1-4) glucosaminyl-acyl-PI [lumenal side of endoplasmic reticulum membrane]", "crossref": [ { "id": "63563", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 200, 246 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 498, "end_pos": 500 }, { "start_pos": 578, "end_pos": 580 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LAS6-1", "uniprot_ac": "I3LAS6", "uniprot_id": "I3LAS6_PIG", "mass": { "chemical_mass": 80641.0, "monoisotopic_mass": 80641.0 }, "refseq": { "ac": "XP_013843239", "name": "putative E3 ubiquitin-protein ligase UNKL isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843239" }, "gene_names": [ { "name": "UNKL", "type": "recommended", "evidence": [ { "id": "I3LAS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAS6" } ] }, { "name": "UNKL", "type": "synonym", "evidence": [ { "id": "XP_013843239", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843239" } ] } ], "protein_names": [ { "name": "Unk like zinc finger", "type": "synonym", "evidence": [ { "id": "I3LAS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAS6/entry#names_and_taxonomy" } ] }, { "name": "putative E3 ubiquitin-protein ligase UNKL isoform X2", "type": "synonym", "evidence": [ { "id": "XP_013843239", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843239" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LAS6", "url": "https://www.uniprot.org/uniprotkb/I3LAS6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UNKL", "url": "https://www.uniprot.org/uniprotkb/I3LAS6", "locus": { "chromosome": "3", "start_pos": 40513047, "end_pos": 40445034, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022963", "url": "https://www.ensembl.org/id/ENSSSCG00000022963" } ] } } ], "crossref": [ { "id": "I3LAS6", "url": "https://alphafold.ebi.ac.uk/entry/I3LAS6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022963", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022963", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100522985", "url": "https://www.ncbi.nlm.nih.gov/gene/100522985", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000571", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000571", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036855", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036855", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040594", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040594", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045234", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045234", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057295", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057295", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057296", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057296", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EWGCRDL", "url": "https://omabrowser.org/oma/group/EWGCRDL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LAS6", "url": "https://www.orthodb.org/?gene=I3LAS6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14493", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14493", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14493:SF37", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14493:SF37", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00642", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00642", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13920", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13920", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18384", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18384", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23035", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23035", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23261", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23261", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25427", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25427", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013843239", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843239", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LAS6", "url": "https://www.uniprot.org/uniprotkb/I3LAS6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAS6-1", "url": "https://www.uniprot.org/uniprotkb/I3LAS6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPSVSKAAAAALSGSPPQTEKPTHYRYLKEFRTEQCSLFVQHKCAQHRPFTCFHWHFLNQRRRRPLRRRDGTFNYSPDVYCSKYDEASGVCPDGDACPYLHRTTGDTERKYHLRYYKTGTCIHETDARGHCVRNGLHCAFAHGPLDLRPPVCDIRELQAQEALQNGQLGTGDGVPDLQPGVLASQALMEKILGEDPRWQDTNFVLGSYKTEQCPKPPRLCRQGYACPHFHNSRDRRRDPRRFPYRSTPCPSVKHGDEWGEPSRCESGDSCQYCHSRTEQQFHPEIYKSTKCNDMRQTGYCPRGPFCAFAHVETAATPSPLPPFSAESLGTASDWGCRDLASVSGPAAPSGQPGHTKWRDSPAEGSQKASEQDSKQSHLAVLAVVHPLAPSVSSSVASSLASSTGSGGSSPTALPALSARAHPLDPTGSAVEAVPGSALDLHLGDISLAAQDKELEEHDGRDLGPAGQRSLGGSAPVAIPGCLPRSPSLHSSSSLSASPLSSLSQSLSGPLVSSAMTPPQQPPPLKSEPRALGPSAPSYSSFGLNGVPGSIWDFVSGSFSPSPSPILNSGPAASSGASANSAELARVRRQLDEAKRKIRQWEESWQQVKQACDAWQREAKEAKERALAADSARQVALQKKEEVEAQFRRLQEELEGQGLCSALPGLRGCGDIGAIPLPKLHSLQSQLRLDLEALDGVIFQVRSKQCVVCGEQARGTVLRPCQHHVLCEACAAGAPECPYCAGQPLPW", "length": 746, "header": "tr|I3LAS6-1|I3LAS6_PIG Isoform 1 of Unk like zinc finger OS=Sus scrofa OX=9823 GN=UNKL PE=3 SV=2 CANONICAL=I3LAS6-1" }, "isoforms": [ { "isoform_ac": "I3LAS6-1", "url": "https://www.uniprot.org/uniprotkb/I3LAS6/entry#I3LAS6-1", "sequence": { "sequence": "MPSVSKAAAAALSGSPPQTEKPTHYRYLKEFRTEQCSLFVQHKCAQHRPFTCFHWHFLNQRRRRPLRRRDGTFNYSPDVYCSKYDEASGVCPDGDACPYLHRTTGDTERKYHLRYYKTGTCIHETDARGHCVRNGLHCAFAHGPLDLRPPVCDIRELQAQEALQNGQLGTGDGVPDLQPGVLASQALMEKILGEDPRWQDTNFVLGSYKTEQCPKPPRLCRQGYACPHFHNSRDRRRDPRRFPYRSTPCPSVKHGDEWGEPSRCESGDSCQYCHSRTEQQFHPEIYKSTKCNDMRQTGYCPRGPFCAFAHVETAATPSPLPPFSAESLGTASDWGCRDLASVSGPAAPSGQPGHTKWRDSPAEGSQKASEQDSKQSHLAVLAVVHPLAPSVSSSVASSLASSTGSGGSSPTALPALSARAHPLDPTGSAVEAVPGSALDLHLGDISLAAQDKELEEHDGRDLGPAGQRSLGGSAPVAIPGCLPRSPSLHSSSSLSASPLSSLSQSLSGPLVSSAMTPPQQPPPLKSEPRALGPSAPSYSSFGLNGVPGSIWDFVSGSFSPSPSPILNSGPAASSGASANSAELARVRRQLDEAKRKIRQWEESWQQVKQACDAWQREAKEAKERALAADSARQVALQKKEEVEAQFRRLQEELEGQGLCSALPGLRGCGDIGAIPLPKLHSLQSQLRLDLEALDGVIFQVRSKQCVVCGEQARGTVLRPCQHHVLCEACAAGAPECPYCAGQPLPW", "length": 746, "header": "tr|I3LAS6-1|I3LAS6_PIG Isoform 1 of Unk like zinc finger OS=Sus scrofa OX=9823 GN=UNKL PE=3 SV=2 CANONICAL=I3LAS6-1" }, "locus": { 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"publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LAS6", "url": "https://www.uniprot.org/uniprotkb/I3LAS6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A3S7-1", "protein_name": "Unk like zinc finger", "gene_name": "Unkl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAPSTTARTFTVPSTMRPPACVPTVTMFIPLLPRCPYLHRTTGDTERKYHLRYYKTGTCIHETDARGHCVKNGLHCAFAHGPLDLRPPVCDIRELQAQEALQNGQLSGGDGVPDLQPGVLASQAMIEKILGEDPRWQDSNFVLGSYKTEQCPKPPRLCRQGYACPHYHNSRDRRRNPRRFQYRSTPCPSVKHGDEWGEPSRCDVGDSCQYCHSRTEQQFHPEIYKSTKCNDMRQTGYCPRGPFCAFAHIEKSLGMVNEWSCRDLSSNSTSAYSSQPGSAKRKDSPSEGSQKATEDSKQNHLAVFSVVHPLAPSISSSVASSLASSTGSGSSSPTTLPNLPARALPLDPAGNTVEAVIGSALDLRLSDINIASLDKDLEEQDLGLTGPRSLAGSAPVTIPGSLPRSPSLHSSSSLSTSPLSSLSQSLSGPLVSSAMTPPQQPPPLRSEPATLGSTASSYSSLGLNGVPGSIWDFVSGSFSPSPSPILNSGPSASSSASPNSAELARVRRQLDEAKRKIRQWEESWQQVKQACDAWQREAQEAKERARVADSDRQLALQRKEEVEAQVKQLQEELEGLGLSSLPGLRSLGDISDIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQCVACQERAHGTVLRPCQHRVLCEPCAASTPECPYCKGQPLPW", "length": 665 }, "evidence": [ { "id": "I3LAS6", "url": "https://omabrowser.org/oma/group/I3LAS6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E7FC88-1", "protein_name": "E3 ubiquitin-protein ligase UNKL isoform X1", "gene_name": "unkl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LAT5-1", "uniprot_ac": "I3LAT5", "uniprot_id": "I3LAT5_PIG", "mass": { "chemical_mass": 20024.0, "monoisotopic_mass": 20024.0 }, "refseq": {}, "gene_names": [ { "name": "EID2", "type": "recommended", "evidence": [ { "id": "I3LAT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT5" } ] } ], "protein_names": [ { "name": "EP300 interacting inhibitor of differentiation 2", "type": "synonym", "evidence": [ { "id": "I3LAT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAT5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LAT5", "url": "https://www.uniprot.org/uniprotkb/I3LAT5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EID2", "url": "https://www.uniprot.org/uniprotkb/I3LAT5", "locus": { "chromosome": "6", "start_pos": 48184566, "end_pos": 48185203, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024773", "url": "https://www.ensembl.org/id/ENSSSCG00000024773" } ] } } ], "crossref": [ { "id": "I3LAT5", "url": "https://alphafold.ebi.ac.uk/entry/I3LAT5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024773", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024773", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR033258", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033258", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15556", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15556", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR001300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007330", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007330", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022682", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022682", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022683", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022683", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022684", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022684", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036181", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036181", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051297", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051297", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GDYRRGC", "url": "https://omabrowser.org/oma/group/GDYRRGC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46143", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46143", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46143:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46143:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00648", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00648", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01067", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01067", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04212", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04212", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1474228", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1474228", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBF0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBF0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDAAALERDAVQFARLAVQRDHEGRYSEAVFYYKEAAQALIYAEMAGSSLEHIQEKINEYLERVQALHSAVQSKSADPLKSKHQLDLERAHFLVTQAFDEDEKGNVEDAIELYTEAVDLCLKTSYETADKTLQNKLKQLARQALDRAEALSEPLTKPLCKVKATNIKPKPPPTRTHFPLGTNPFQERPQPFISPQSCDAQGQRYTAEEIEVLRTTSKINGIEYVPFMNIDLRERFAYPMPFCDRCGKLPLSPKQKAMFSKWVRPEDLTNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDSQSFSKDNSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWTPELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVIYLSWNPGLFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTVSKQINGKWSGQSAGGCGNFQETHKNNPIYQFHIEKSGPLLIELRGPRQYSVGFEVVTVSVVGDPGPHGFQRKSSGDYRCGFCYLELESIPAGIYNIIPSTFLPKQEGPFFLDFNSVIPIKTTQLQ", "length": 813, "header": "tr|I3LBF0-1|I3LBF0_PIG Isoform 1 of Calpain-7 OS=Sus scrofa OX=9823 GN=CAPN7 PE=3 SV=4 CANONICAL=I3LBF0-1" }, "isoforms": [ { "isoform_ac": "I3LBF0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBF0/entry#I3LBF0-1", "sequence": { "sequence": "MDAAALERDAVQFARLAVQRDHEGRYSEAVFYYKEAAQALIYAEMAGSSLEHIQEKINEYLERVQALHSAVQSKSADPLKSKHQLDLERAHFLVTQAFDEDEKGNVEDAIELYTEAVDLCLKTSYETADKTLQNKLKQLARQALDRAEALSEPLTKPLCKVKATNIKPKPPPTRTHFPLGTNPFQERPQPFISPQSCDAQGQRYTAEEIEVLRTTSKINGIEYVPFMNIDLRERFAYPMPFCDRCGKLPLSPKQKAMFSKWVRPEDLTNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDSQSFSKDNSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWTPELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVIYLSWNPGLFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTVSKQINGKWSGQSAGGCGNFQETHKNNPIYQFHIEKSGPLLIELRGPRQYSVGFEVVTVSVVGDPGPHGFQRKSSGDYRCGFCYLELESIPAGIYNIIPSTFLPKQEGPFFLDFNSVIPIKTTQLQ", "length": 813, "header": "tr|I3LBF0-1|I3LBF0_PIG Isoform 1 of Calpain-7 OS=Sus scrofa OX=9823 GN=CAPN7 PE=3 SV=4 CANONICAL=I3LBF0-1" }, "locus": { "chromosome": "13", "start_pos": 2503514, "end_pos": 2452389, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022738.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022738.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021370.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021370.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1474228", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1474228", "resource": "Reactome", "description": "Degradation of the extracellular matrix" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MLZ4-1", "protein_name": "Calpain-7", "gene_name": "Capn7", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDATALERDAVQFARLAVQRDHEGRYSEAVFYYKEAAQALIYAEMAGSSLERIQEKISEYLERVQALHSAVQSKSADPLKSKHQLDLERAHFLVTQAFDEDEKGNVEDAIELYTEAVDLCLKTSYETADKTLQNKLKQLARQALDRAEALSEPLTKPFCKLKSTNMKTKTPPVRTHFPLGPNPFLEKPQPFISPQSCDAQGQRYTAEEIEVLRTTSKINGIEYVPFMSVDLRERFAYPMPFCDRWGKLPLSPKQKTTFSKWVRPEDLTNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGMMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWTPELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVVYLSWNPALFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTLSKRINGKWSGQSAGGCGNFQETHKNNPIYQFHVDKTGPLLIELRGPRQYSVGFEVVAVSIIGDSGPHCFQRKSSGDYRCGFCYLELENIPAGIFNIIPSTFLPKQEGPFFLDFNSTVPIKTTQLQ", "length": 813 }, "evidence": [ { "id": "I3LBF0", "url": "https://omabrowser.org/oma/group/I3LBF0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0Z0N6-1", "protein_name": "Calpain 7", "gene_name": "CAPN7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDASALELDAVKFAQLAVQRDQSGRYQEAVFYYKEAAQALIYAGMAGSSLENIQEKINEYLERVQALHSAVQSQNTDPLKSKQQLDLERAHFLVTQAFDEDDKGNAEEAIELYTEAVELCLKTATETSEAGLQSKLKQLARQALDRAEALKVSMSKSSQKEKSTAAKPNQPVRTFFPLGPDFSLNDKPQTIRAVQASESQGQRYTAEEIEVLRKTSKINGIEYVPFMSVDLRERFAFPMPFSDKCGKLPLSPKQKAMFAKWVRPDDITNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRYNKKLITSIIYPQNKKGEPEYNPCGKYMVKLHINGVPRKVIIDDQLPVDHSGELLCSYSNNKNELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDNQAFDRDSTFRMLYQRFHKGDVLITTATGVMSEEEGEKWGLVPTHAYAVLDIREHKGLRFLQLKNPWSHLRWKGRYSENDTRSWTPDLQKYLNFDPRTAQKIDNGIFWIAWEDLCQYYDVIYLSWNPGLFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAVVWVLLSRHITDKDDFAHNREFITMVVYKTDGKKVYYPADPVPYIDGIRINSPHYLTKIKLTSPGTHTFTLVVSQYEKQNTIHYTIRVYSLCKFTFSKIPTPYTISKRVNGQWKGHSAGGCGNFRDSYKNNPIYQFQLDKSGPLLIELRGPRQYSVGFEIVTVSTVGDPGSYGFQKKSSGDYRCGFCYLEVENILAGVYNIIPTTFLPQQEGPFFLDFNSTSPLRVSQLQ", "length": 813 }, "evidence": [ { "id": "I3LBF0", "url": "https://omabrowser.org/oma/group/I3LBF0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BIX3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDSAALERDAVQFARLAVQRDQEGRYAEAVFYYKEAAQALIYAEMAGSSLEHIQEKINEYLERVQALHSAVQSKSADPLKSKHQLDLERAHFLVTQAFDEDEKGNVEDAIELYTEAVDLCLKTSYETADKTLQNKLKQLARQALDRAEALSEPLTKQSCKIKATNTKPKPPPTRTHFPLGTNPFLERPQPFISPQSCDAQGQRYTAEEIEVLRTTSKINGIEYVPFMSIDLRERFAYPMPFCDRCGKLPLSPKQKATFSKWVRPEDLTNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDSQAFSKDNSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWTPELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVIYLSWNPGLFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTVSKQINGKWSGQSAGGCGNFQETHKNNPIYQFHIEKTGPLLIELRGPRQYSVGFEVVTVSVVGDPGPHGFQRKSSGDYRCGFCYLELENIPAGIYNIIPSTFLPKQEGPFFLDFNSIIPIKTTQLQ", "length": 813 }, "evidence": [ { "id": "I3LBF0", "url": "https://omabrowser.org/oma/group/I3LBF0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9R1S8-1", "protein_name": "Calpain-7", "gene_name": "Capn7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDASALERDAVQFARLAVQRDHEGRYSEAVFYYKEAAQALIYAEMAGSSLERIQEKINEYLERVQALHSAVQSKSTDPLKSKHQLDLERAHFLVTQAFDEDEKGNVEDAIELYTEAVELCLKTSSETADKTLQNKLKQLARQALDRAEALSEPLTKPFCKLKSANMKTKTPPVRTHFPLGPNPFVEKPQAFISPQSCDAQGQKYTAEEIEVLRTTSKINGVEYVPFMSVDLRERFAYPMPFCDRLGKLPLSPKQKTTFSKWVRPEDLTNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWTPELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVVYLSWNPALFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTLSKRINGKWSGQSAGGCGNFQETHKNNPIYQFHIDKTGPLLIELRGPRQYSVGFEVVAVSIMGDPGPHGFQRKSSGDYRCGFCYLELENIPAGIFNIIPSTFLPKQEGPFFLDFNSTVPIKTTQLQ", "length": 813 }, "evidence": [ { "id": "I3LBF0", "url": "https://omabrowser.org/oma/group/I3LBF0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y6W3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDATALERDAVQFARLAVQRDHEGRYSEAVFYYKEAAQALIYAEMAGSSLENIQEKITEYLERVQALHSAVQSKSADPLKSKHQLDLERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCLKTSYETADKVLQNKLKQLARQALDRAEALSEPLTKPVGKISSTSVKPKPPPVRAHFPLGANPFLERPQSFISPQSCDAQGQRYTAEEIEVLRTTSKINGIEYVPFMNVDLRERFAYPMPFCDRWGKLPLSPKQKTTFSKWVRPEDLTNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITGIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGMMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWTPELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVIYLSWNPGLFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTLSKRINGKWSGQSAGGCGNFQETHKNNPIYQFHIEKTGPLLIELRGPRQYSVGFEVVTVSTLGDPGPHGFLRKSSGDYRCGFCYLELENIPSGIFNIIPSTFLPKQEGPFFLDFNSIIPIKITQLQ", "length": 813 }, "evidence": [ { "id": "I3LBF0", "url": "https://omabrowser.org/oma/group/I3LBF0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "calcium-dependent cysteine-type endopeptidase activity", "id": "GO:0004198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004198", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "pmid": "" }, { "name": "cysteine-type endopeptidase activity", "id": "GO:0004197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004197", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "pmid": "" }, { "name": "MIT domain binding", "id": "GO:0090541", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090541", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "pmid": "" }, { "name": "positive regulation of epithelial cell migration", "id": "GO:0010634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010634", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "pmid": "" }, { "name": "self proteolysis", "id": "GO:0097264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097264", "evidence": [ { "database": "UniProtKB", "id": "I3LBF0", "url": "https://www.uniprot.org/uniprotkb/I3LBF0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], 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"url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NUDT15", "url": "https://www.uniprot.org/uniprotkb/I3LBG2", "locus": { "chromosome": "11", "start_pos": 19572644, "end_pos": 19584528, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027551", "url": "https://www.ensembl.org/id/ENSSSCG00000027551" } ] } } ], "crossref": [ { "id": "I3LBG2", "url": "https://alphafold.ebi.ac.uk/entry/I3LBG2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027551", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027551", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04678", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04678", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000086", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000086", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015797", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015797", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HFEASRN", "url": "https://omabrowser.org/oma/group/HFEASRN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16099", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16099", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16099:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16099:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00293", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00293", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2393930", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2393930", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9748787", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9748787", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "23996", "url": "https://www.rhea-db.org/rhea/23996", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "28362", "url": "https://www.rhea-db.org/rhea/28362", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "44644", "url": "https://www.rhea-db.org/rhea/44644", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "47944", "url": "https://www.rhea-db.org/rhea/47944", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "48128", "url": "https://www.rhea-db.org/rhea/48128", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "67592", "url": "https://www.rhea-db.org/rhea/67592", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "70503", "url": "https://www.rhea-db.org/rhea/70503", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "70507", "url": "https://www.rhea-db.org/rhea/70507", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBG2-1", "url": "https://www.uniprot.org/uniprotkb/I3LBG2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSGAEPRVRRPGVGIGVVVTSCRHPRCVLLGKRKGSFGAGSFQLPGGHLEFGPVGWAGGGWGTLEEAALHLKNVRFASVVNSFIEGENYHYVTVLMKGEVDTTHDSEPKNVEPEKNESWEWVPWEDFPPLDQLFWGLRCLKEQGYDPFKEDLDHLVGYKGNHLEVNKKIP", "length": 171, "header": "tr|I3LBG2-1|I3LBG2_PIG Isoform 1 of Nucleotide triphosphate diphosphatase NUDT15 OS=Sus scrofa OX=9823 GN=NUDT15 PE=1 SV=3 CANONICAL=I3LBG2-1" }, "isoforms": [ { "isoform_ac": "I3LBG2-1", "url": "https://www.uniprot.org/uniprotkb/I3LBG2/entry#I3LBG2-1", "sequence": { "sequence": "MTSGAEPRVRRPGVGIGVVVTSCRHPRCVLLGKRKGSFGAGSFQLPGGHLEFGPVGWAGGGWGTLEEAALHLKNVRFASVVNSFIEGENYHYVTVLMKGEVDTTHDSEPKNVEPEKNESWEWVPWEDFPPLDQLFWGLRCLKEQGYDPFKEDLDHLVGYKGNHLEVNKKIP", "length": 171, "header": "tr|I3LBG2-1|I3LBG2_PIG Isoform 1 of Nucleotide triphosphate diphosphatase NUDT15 OS=Sus scrofa OX=9823 GN=NUDT15 PE=1 SV=3 CANONICAL=I3LBG2-1" }, "locus": { "chromosome": "11", "start_pos": 19584528, "end_pos": 19573662, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023371.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023371.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021382.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021382.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2393930", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2393930", "resource": "Reactome", "description": "Phosphate bond hydrolysis by NUDT proteins" }, { "id": "R-SSC-9748787", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9748787", "resource": "Reactome", "description": "Azathioprine ADME" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7GQH6-1", "protein_name": "Nucleotide triphosphate diphosphatase NUDT15", "gene_name": "Nudt15", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTANAEPRRRPGVGVGVVVVSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVRFASVVNSFVERENYHYVTILMKGEVDMDHHSEPKNMEPEKNESWEWIPWEEFPPSDQLFWALRCLKEQGYDPFREDLNHLEGYRGEHLQGPKEIP", "length": 170 }, "evidence": [ { "id": "I3LBG2", "url": "https://omabrowser.org/oma/group/I3LBG2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BG93-1", "protein_name": "Nucleotide triphosphate diphosphatase NUDT15", "gene_name": "Nudt15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAANAEPRRRPGVGVGVVVLSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAGLHLKNVCFASVVNSFVEKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWEEFPPLDQLFWALRCLKEQGYDPFKEDLNHLEGYRGEHLERTTKTP", "length": 170 }, "evidence": [ { "id": "I3LBG2", "url": "https://omabrowser.org/oma/group/I3LBG2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CA40-1", "protein_name": "Nudix hydrolase 1", "gene_name": "NUDT1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTGEAIPRVAVVVFILNGNSILLGRRRSSIGNSTFALPGGHLEFGESFEECAAREVMEETGLKIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLPKPLFWPLEKLFGSGFNPFTHGGGD", "length": 147 }, "evidence": [ { "id": "I3LBG2", "url": "https://omabrowser.org/oma/group/I3LBG2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NV35-1", "protein_name": "Nucleotide triphosphate diphosphatase NUDT15", "gene_name": "NUDT15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTASAQPRGRRPGVGVGVVVTSCKHPRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWVPWEELPPLDQLFWGLRCLKEQGYDPFKEDLNHLVGYKGNHL", "length": 164 }, "evidence": [ { "id": "I3LBG2", "url": "https://omabrowser.org/oma/group/I3LBG2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "dGTP catabolic process", "id": "GO:0006203", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006203", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "DNA protection", "id": "GO:0042262", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042262", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "xenobiotic catabolic process", "id": "GO:0042178", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042178", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "regulation of proteasomal protein catabolic process", "id": "GO:0061136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061136", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity", "id": "GO:0008413", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008413", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity", "id": "GO:0035539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035539", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" }, { "name": "isoprenoid diphosphate phosphatase activity", "id": "GO:0106405", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106405", "evidence": [ { "database": "UniProtKB", "id": "I3LBG2", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "23996", "name": "", "equation": "a ribonucleoside 5'-triphosphate + H2O = a ribonucleoside 5'-phosphate + diphosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "23996", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/23996" } ] }, { "id": "28362", "name": "", "equation": "dGTP + H2O = dGMP + diphosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "28362", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/28362" } ] }, { "id": "44644", "name": "", "equation": "a 2'-deoxyribonucleoside 5'-triphosphate + H2O = a 2'-deoxyribonucleoside 5'-phosphate + diphosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "44644", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/44644" } ] }, { "id": "47944", "name": "", "equation": "(2E)-geranyl diphosphate + H2O = (2E)-geranyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "47944", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/47944" } ] }, { "id": "48128", "name": "", "equation": "(2E,6E)-farnesyl diphosphate + H2O = (2E,6E)-farnesyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48128", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48128" } ] }, { "id": "67592", "name": "", "equation": "a 5'-end CoA-ribonucleoside in mRNA + H2O = a 5'-end phospho-adenosine-phospho-ribonucleoside in mRNA + (R)-4'-phosphopantetheine + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "67592", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/67592" } ] }, { "id": "70503", "name": "", "equation": "isopentenyl diphosphate + H2O = isopentenyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "70503", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/70503" } ] }, { "id": "70507", "name": "", "equation": "dimethylallyl diphosphate + H2O = dimethylallyl phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "70507", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/70507" } ] }, { "id": "R-SSC-2395869", "name": "NUDT15 hydrolyses 8-oxo-dGTP to 8-oxo-dGMP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-9731302" ], "output_participant_list": [ "R-ALL-9731296" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2395869", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2395869" } ] }, { "id": "R-SSC-2395876", "name": "NUDT15 hydrolyses 8-oxo-dGDP to 8-oxo-dGMP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-9731300" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2395876", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2395876" } ] }, { "id": "R-SSC-9750555", "name": "NUDT15 dimer dephosphorylates 6TdGTP to 6TdGMP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-9749032" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9750555", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9750555" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-9731296", "participant_name": "8-oxo-dGMP(2-) [cytosol]", "crossref": [ { "id": "CPD-12365", "database": "AraCyc", "url": "" }, { "id": "ZINC000012501484", "database": "ZINC", "url": "" }, { "id": "63224", "database": "ChEBI", "url": "" }, { "id": "46173535", "database": "PubChem Compound", "url": "" } ] }, { "participant_id": "R-ALL-9731300", "participant_name": "8-oxo-dGDP(3-) [cytosol]", "crossref": [ { "id": "63715", "database": "ChEBI", "url": "" }, { "id": "ZINC000058638349", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-9731302", "participant_name": "8-oxo-dGTP(4-) [cytosol]", "crossref": [ { "id": "77896", "database": "ChEBI", "url": "" }, { "id": "ZINC000040165388", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-9749032", "participant_name": "6TdGTP [cytosol]", "crossref": [ { "id": "180691", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LBG2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 171, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LBG2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LBG2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LBG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBG2" }, { "id": "PS51462", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51462" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Nudix hydrolase", "eco_id": "ECO_0000259", 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"table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LBH4-1", "uniprot_ac": "I3LBH4", "uniprot_id": "I3LBH4_PIG", "mass": { "chemical_mass": 17884.0, "monoisotopic_mass": 17884.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Large ribosomal subunit protein uL11", "type": "recommended", "evidence": [ { "id": "I3LBH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBH4/entry#names_and_taxonomy" } ] }, { "name": "60S ribosomal protein L12", "type": "synonym", "evidence": [ { "id": "I3LBH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBH4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. 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Expression" ] }, { "id": "cd00349", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00349", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000911", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000911", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020784", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020784", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020785", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020785", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036769", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036769", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11661", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11661", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11661:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11661:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00298", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00298", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03946", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03946", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LBH4", "url": "https://www.uniprot.org/uniprotkb/I3LBH4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBH4-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165, "header": "tr|I3LBH4-1|I3LBH4_PIG Isoform 1 of Large ribosomal subunit protein uL11 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=I3LBH4-1" }, "isoforms": [ { "isoform_ac": "I3LBH4-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH4/entry#I3LBH4-1", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165, "header": "tr|I3LBH4-1|I3LBH4_PIG Isoform 1 of Large ribosomal subunit protein uL11 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=I3LBH4-1" }, "locus": { "chromosome": "14", "start_pos": 34149832, "end_pos": 34149338, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000010794.4", "url": "https://www.ensembl.org/id/ENSSSCT00000010794.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021394.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021394.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBH4", "url": "https://www.uniprot.org/uniprotkb/I3LBH4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "I3LBH4", "url": "https://omabrowser.org/oma/group/I3LBH4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "translation", "id": "GO:0006412", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006412", "evidence": [ { "database": "UniProtKB", "id": "I3LBH4", "url": "https://www.uniprot.org/uniprotkb/I3LBH4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "structural constituent of ribosome", "id": "GO:0003735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003735", "evidence": [ { "database": "UniProtKB", "id": "I3LBH4", "url": "https://www.uniprot.org/uniprotkb/I3LBH4" } ], "pmid": "" }, { "name": "large ribosomal subunit rRNA binding", "id": "GO:0070180", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070180", "evidence": [ { "database": "UniProtKB", "id": "I3LBH4", "url": "https://www.uniprot.org/uniprotkb/I3LBH4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosolic large ribosomal subunit", "id": "GO:0022625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022625", "evidence": [ { "database": "UniProtKB", "id": "I3LBH4", "url": "https://www.uniprot.org/uniprotkb/I3LBH4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LBH4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 165, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LBH4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LBH4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LBH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBH4" }, { "id": "PF00298", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00298" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Large ribosomal subunit protein uL11 C-terminal", "eco_id": "ECO_0000259", "start_pos": 74, "end_pos": 143, "start_aa": "Val", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LBH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBH4" }, { "id": "PF03946", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03946" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Large ribosomal subunit protein uL11 N-terminal", "eco_id": "ECO_0000259", "start_pos": 13, "end_pos": 69, "start_aa": "Met", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 103, "end_pos": 105 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LBI5-1", "uniprot_ac": "I3LBI5", "uniprot_id": "I3LBI5_PIG", "mass": { "chemical_mass": 42620.0, "monoisotopic_mass": 42620.0 }, "refseq": {}, "gene_names": [ { "name": "CCR6", "type": "recommended", "evidence": [ { "id": "I3LBI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBI5" } ] } ], "protein_names": [ { "name": "C-C motif chemokine receptor 6", "type": "synonym", "evidence": [ { "id": "I3LBI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBI5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LBI5", "url": "https://www.uniprot.org/uniprotkb/I3LBI5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCR6", "url": "https://www.uniprot.org/uniprotkb/I3LBI5", "locus": { "chromosome": "1", "start_pos": 2018608, "end_pos": 2019821, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024562", "url": "https://www.ensembl.org/id/ENSSSCG00000024562" } ] } } ], "crossref": [ { "id": "I3LBI5", "url": "https://alphafold.ebi.ac.uk/entry/I3LBI5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024562", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024562", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15172", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15172", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000355", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000355", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004067", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004067", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", 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"name": "TBC1D30", "type": "recommended", "evidence": [ { "id": "I3LBK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ] }, { "name": "TBC1D30", "type": "synonym", "evidence": [ { "id": "XP_020947612", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947612" } ] } ], "protein_names": [ { "name": "TBC1 domain family member 30", "type": "recommended", "evidence": [ { "id": "I3LBK2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBK2/entry#names_and_taxonomy" } ] }, { "name": "TBC1 domain family member 30 isoform X6", "type": "synonym", "evidence": [ { "id": "XP_020947612", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947612" } ] } ], "function": [ { "annotation": "May act as a GTPase-activating protein for Rab family protein(s).", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2#function" }, { "database": "UniProtKB", "id": "ARBA00043879", "url": "https://www.uniprot.org/uniprotkb/ARBA00043879#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TBC1D30", "url": "https://www.uniprot.org/uniprotkb/I3LBK2", "locus": { "chromosome": "5", "start_pos": 29298407, "end_pos": 29248091, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023788", "url": "https://www.ensembl.org/id/ENSSSCG00000023788" } ] } } ], "crossref": [ { "id": "ENSSSCG00000023788", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023788", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100623817", "url": "https://www.ncbi.nlm.nih.gov/gene/100623817", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032738", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032738", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WAKLGXT", "url": "https://omabrowser.org/oma/group/WAKLGXT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13399", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13399", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13399:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13399:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00566", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00566", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15733", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15733", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020947612", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947612", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBK2-1", "url": "https://www.uniprot.org/uniprotkb/I3LBK2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRQDKLTGSLRRGGRCLKRQGGGGGGGGGGVGTILSNVLKKRSCISRTAPRLLCTLEPGVDTKLKFTLEPSLGQNGFQQWYDALKAVARLSTGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSNPDDDSMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVVEGNEGDALKIMIYLIDKVLPESYFVNNLRALSVDMAVFRDLLRLKLPELSQHLDTLQRTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNQTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECCETADEFYSTMGRLTQEMLENDLLESHELMQTVYSMAPFPFPQLAELREKYTYNITPFPAAVKPTSVSGRHSKVRDSDEENDPDDEDAIANAVGCLGPFSGLLAPELQKYQKQIKEPNGDQSLRANNIAELSPGAINSCRSEYHAAFNSMMMERMTTDINALKRQYSRIKKKQQQQAHQVYIRADKGPVTSILPSQVNNSPVINHLLLGKKMKLSNRAAKNAVIHIPGHTGGKVSPVPYEDLRAKLNSPWRTHIRVHKKNMTRTRSQLGCGDTIGLIEEQNDGKTHNPGAAEAFASSCSVTAGREGGGSDGGSGRTPQEQSPEPGLGEADADVSDVQVKLEALELNPRDAAAETEPKGHLPCLRPFPGPPDTPGGSKATGKSPPGSHPKAPIFSPFPSVKPLRKSATARNLGLYGPTERTPTVHFPRMSRSFSKSSGGNSGTKKR", "length": 767, "header": "tr|I3LBK2-1|I3LBK2_PIG Isoform 1 of TBC1 domain family member 30 OS=Sus scrofa OX=9823 GN=TBC1D30 PE=4 SV=2 CANONICAL=I3LBK2-1" }, "isoforms": [ { "isoform_ac": "I3LBK2-1", "url": "https://www.uniprot.org/uniprotkb/I3LBK2/entry#I3LBK2-1", "sequence": { "sequence": "MRQDKLTGSLRRGGRCLKRQGGGGGGGGGGVGTILSNVLKKRSCISRTAPRLLCTLEPGVDTKLKFTLEPSLGQNGFQQWYDALKAVARLSTGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSNPDDDSMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVVEGNEGDALKIMIYLIDKVLPESYFVNNLRALSVDMAVFRDLLRLKLPELSQHLDTLQRTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNQTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECCETADEFYSTMGRLTQEMLENDLLESHELMQTVYSMAPFPFPQLAELREKYTYNITPFPAAVKPTSVSGRHSKVRDSDEENDPDDEDAIANAVGCLGPFSGLLAPELQKYQKQIKEPNGDQSLRANNIAELSPGAINSCRSEYHAAFNSMMMERMTTDINALKRQYSRIKKKQQQQAHQVYIRADKGPVTSILPSQVNNSPVINHLLLGKKMKLSNRAAKNAVIHIPGHTGGKVSPVPYEDLRAKLNSPWRTHIRVHKKNMTRTRSQLGCGDTIGLIEEQNDGKTHNPGAAEAFASSCSVTAGREGGGSDGGSGRTPQEQSPEPGLGEADADVSDVQVKLEALELNPRDAAAETEPKGHLPCLRPFPGPPDTPGGSKATGKSPPGSHPKAPIFSPFPSVKPLRKSATARNLGLYGPTERTPTVHFPRMSRSFSKSSGGNSGTKKR", "length": 767, "header": "tr|I3LBK2-1|I3LBK2_PIG Isoform 1 of TBC1 domain family member 30 OS=Sus scrofa OX=9823 GN=TBC1D30 PE=4 SV=2 CANONICAL=I3LBK2-1" }, "locus": { "chromosome": "5", "start_pos": 29295658, "end_pos": 29248321, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028687.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028687.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021423.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021423.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1N272-1", "protein_name": "TBC1 domain family member 30", "gene_name": "TBC1D30", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRQDKLTGSLRRGGRCLKRQGGGGGGGGGVGTILSNVLKKRSCISRTAPRLLCTLEPGVDTKLKFTLEPSLGQNGFQQWYDALKAVARLSTGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSNPDDDSMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVVEGNEGDALKIMIYLIDKVLPESYFVNNLRALSVDMAVFRDLLRLNLPELSQHLDTLQKTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECCETADEFYSTMGRLTQEMLENDLLESHELMQTVYSMAPFPFPQLAELREKYTYNITPFPATVKPTSISGRHGKVRDSDEENDPDDEDVIANAVGCLGPFSGLLAPELQKYQKQVKESNGDQSLRSNNIAELSPGAINSCRSEYHAASNSMMMERMTTDINALKRQYSRIKKKQQQQVHQVYIRADKGPVTSILPSQVNSSPVINHLLLGKKMKMSNRAAKNAVIHIPGHTGGKISPVPYEDLRTKLNSPWRTHIRVHKKNMARTKSQLGCGDMVGLIEEQSEGSKTHTLGAAKASPSDCVGTAQGGCSDGSTGRTIEGRSPEPVFGDGDADVSEVQVKIEALELTPRDAAAEPEPRVPPPSQRHFPEPPNAPGGNRVPGKAPQGGSHPKTPIFSPFPSVKPLRKSTAARNLGLYGPTERTPTVHFPHMSRSFSKSGSGNSSTKKR", "length": 766 }, "evidence": [ { "id": "I3LBK2", "url": "https://omabrowser.org/oma/group/I3LBK2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V0YI12-1", "protein_name": "TBC1 domain family member 30", "gene_name": "TBC1D30", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAGERGAGGRAGSSADSLAEEEDEEDEEVPGSGRSSRTSSLVSGLLTELYSAAEVAAPPRVLRELQQQRPSRAEYLRLKDVDELTTIKRELNYRISVQSAKLLHLLKLKDRLVHKVQKNCDIVTACLQAVSQKRRVDTKLKFTLEPSLGQNGFQQWHDALKAVARLPTGIPKEWRRKVWLTLADQYLHSIAIDWDKTMRFTFNERSNPDDDSMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKSVGYCQGFNILAALILEVMEGNEGDALKIMIYLIDKVLPDSYFVNNLRALSVDMAVFRDLLRMNLPELSQHLDTLQRAANRESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEIILRVALAIWAKLGEQIECCETADEFYSTMGKLTQEMLEDSLIDSNELMQTVYTMAQFPFPQLAELREKYTYNITPFPATVKSTSLSGRLGRTRDSDEENDLDDEDSIANAIGCLGPLSGFLAPELQKYQKQMKDQNEEQSLGSSNIAELSPGAIDSCRSEYHAAFNSMMMERMTTDINALKKQYSRIKKKQQQQVHHVYIRAGSEDDDPGIFLGPRNQLNNDKGPVTSILPSQVNHSPVINHLLLGKKLKSSNKSLKNAVIHIPSHATGKMSPIPQEDLKSKLNSPWRTHIRVHRKNIARAKGQLGYGDTIGLIDEQSESCKTNCPGAKEDASKHSDFGEGGGSLDDRTTRKADQQSADAVSMDSNTDMTVVQLKLETLELTSDNKTDAESTSSQSRLSEPSSSSSDNGNLAKSPQSGNSKPQVFNPFPSVKPLRKSATARNLGLYGPTERTPTVHFPQMSRSFSKSASANSGTRKR", "length": 858 }, "evidence": [ { "id": "I3LBK2", "url": "https://omabrowser.org/oma/group/I3LBK2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9Y2I9-1", "protein_name": "TBC1 domain family member 30", "gene_name": "TBC1D30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://omabrowser.org/oma/group/I3LBK2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of cilium assembly", "id": "GO:1902018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902018", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "I3LBK2", "url": "https://www.uniprot.org/uniprotkb/I3LBK2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 287, "end_pos": 289, "annotation": "n_glycosylation_sequon" }, { "start_pos": 376, "end_pos": 378, "annotation": "n_glycosylation_sequon" }, { "start_pos": 520, 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LBN0-1", "uniprot_ac": "I3LBN0", "uniprot_id": "I3LBN0_PIG", "mass": { "chemical_mass": 124753.0, "monoisotopic_mass": 124753.0 }, "refseq": { "ac": "XP_020939688", "name": "lysine-specific demethylase 4B isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939688" }, "gene_names": [ { "name": "KDM4B", "type": "recommended", "evidence": [ { "id": "I3LBN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ] }, { "name": "KDM4B", "type": "synonym", "evidence": [ { "id": "XP_020939688", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939688" } ] } ], "protein_names": [ { "name": "Lysine-specific demethylase 4B", "type": "recommended", "evidence": [ { "id": "I3LBN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#names_and_taxonomy" } ] }, { "name": "1.14.11.66", "type": "synonym", "evidence": [ { "id": "I3LBN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#names_and_taxonomy" } ] }, { "name": "JmjC domain-containing histone demethylation protein 3B", "type": "synonym", "evidence": [ { "id": "I3LBN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#names_and_taxonomy" } ] }, { "name": "Jumonji domain-containing protein 2B", "type": "synonym", "evidence": [ { "id": "I3LBN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#names_and_taxonomy" } ] }, { "name": "[histone H3]-trimethyl-L-lysine(9) demethylase 4B", "type": "synonym", "evidence": [ { "id": "I3LBN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#names_and_taxonomy" } ] }, { "name": "lysine-specific demethylase 4B isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020939688", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939688" } ] } ], "function": [ { "annotation": "Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a role in histone code. Does not demethylate histone H3 'Lys-4', H3 'Lys-27', H3 'Lys-36' nor H4 'Lys-20'. Only able to demethylate trimethylated H3 'Lys-9', with a weaker activity than KDM4A, KDM4C and KDM4D. Demethylation of Lys residue generates formaldehyde and succinate. Plays a critical role in the development of the central nervous system (CNS).", "evidence": [ { "database": "UniProtKB", "id": "I3LP33", "url": "https://www.uniprot.org/uniprotkb/I3LP33#function" }, { "database": "UniProtKB", "id": "ARBA00054423", "url": "https://www.uniprot.org/uniprotkb/ARBA00054423#function" }, { "database": "UniProtKB", "id": "A0A5K1VQN6", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VQN6#function" }, { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KDM4B", "url": "https://www.uniprot.org/uniprotkb/I3LBN0", "locus": { "chromosome": "2", "start_pos": 73747669, "end_pos": 73889866, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024570", "url": "https://www.ensembl.org/id/ENSSSCG00000024570" } ] } } ], "crossref": [ { "id": "I3LBN0", "url": "https://alphafold.ebi.ac.uk/entry/I3LBN0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024570", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024570", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15576", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15576", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd15714", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15714", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd20464", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20464", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd20467", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20467", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100738761", "url": "https://www.ncbi.nlm.nih.gov/gene/100738761", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002999", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002999", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003347", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003347", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011011", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011011", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019787", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019787", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034732", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034732", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040477", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040477", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738761", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738761", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KFYQVEF", "url": "https://omabrowser.org/oma/group/KFYQVEF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LBN0", "url": "https://www.orthodb.org/?gene=I3LBN0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10694", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10694", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10694:SF30", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10694:SF30", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02373", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02373", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02375", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02375", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13831", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13831", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13832", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13832", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18104", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18104", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3214842", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3214842", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5693565", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5693565", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9018519", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9018519", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020939688", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939688", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "60200", "url": "https://www.rhea-db.org/rhea/60200", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5K1VQN6", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VQN6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VQN6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VQN6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBN0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBN0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LP33", "url": "https://www.uniprot.org/uniprotkb/I3LP33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LP33-1", "url": "https://www.uniprot.org/uniprotkb/I3LP33-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSASRASLKAKLLRRQISLKENRHWKKTEEERKPNLERKKEQTRKPGLSSHRKRSQPKKPKPDDPKSPGEGAAGAAILEEAGGGVKEEAALEADPEEEEEEPQSLPQGRDAEGAEEDGRGKLRPAKSKSERKKKSCGPLHPHQLPPPLPPQFPMEEAPLLESPAPAPGPEATEESPPPPPLNVVPPEAPGEEPEAKPRPIIPMLYVVPRPGPTTGDKGRVSCQQASEHFAQKGPTWKEQVAPMELTGPEEESGAGEVQAPATFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGDEDVGDPEALRSLLSLQWKNKAANFQAERKFNAAAALTEPYCAICTLFYPYSQSLQTEKETPQASLGEGPSATPPSKSGQKTRPLIPEMCFISSGENTEPLPANSYIGDDGTSLLIACAKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGSHNVQVLRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRDCVRLGPPPEGEFVELRWTDGNIYRAKFISSVTSHIYQVEFEDGSQLTVKRGDLFTLDEELPKRVRSRLSVSTGAPQENVFSGEEVKAAKRPRVGTPRAAEDSGRNPDYLAFMESLLQAQCRPGASF", "length": 1116, "header": "tr|I3LBN0-1|I3LBN0_PIG Isoform 1 of Lysine-specific demethylase 4B OS=Sus scrofa OX=9823 GN=KDM4B PE=3 SV=2 CANONICAL=I3LBN0-1" }, "isoforms": [ { "isoform_ac": "A0A5K1VQN6-1", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#A0A5K1VQN6-1", "sequence": { "sequence": "MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSASRASLKAKLLRRSHRKRSQPKKPKPDDPKSPGEGAAGAAILEEAGGGVKEEAALEADPEEEEEEPQSLPQGRDAEGAEEDGRGKLRPAKSKSERKKKSCGPLHPHQLPPPLPPQFPMEEAPLLESPAPAPGPEATEESPPPPPLNVVPPEAPGEEPEAKPRPIIPMLYVVPRPGPTTGDKGRVSCQQASEHFAQKGPTWKEQVAPMELTGPEEESGAGEVQAPATFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGDEDVGDPEALRSLLSLQWKNKAANFQAERKFNAAAALTEPYCAICTLFYPYSQSLQTEKETPQASLGEGPSATPPSKSGQKTRPLIPEMCFISSGENTEPLPANSYIGDDGTSLLIACAKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGSHNVQVLRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRDCVRLGPPPEGEFVELRWTDGNIYRAKFISSVTSHIYQVEFEDGSQLTVKRGDLFTLDEELPKRVRSRLSVSTGAPQENVFSGEEVKAAKRPRVGTPRAAEDSGRNPDYLAFMESLLQAQCRPGASF", "length": 1082, "header": "tr|A0A5K1VQN6-1|A0A5K1VQN6_PIG Computationally mapped isoform of Lysine-specific demethylase 4B OS=Sus scrofa OX=9823 GN=KDM4B PE=3 SV=2 CANONICAL=I3LBN0-1" }, "locus": { "chromosome": "2", "start_pos": 73841907, "end_pos": 73748056, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025153.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025153.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023384.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023384.4" } ] } }, { "isoform_ac": "I3LBN0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#I3LBN0-1", "sequence": { "sequence": "MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSASRASLKAKLLRRQISLKENRHWKKTEEERKPNLERKKEQTRKPGLSSHRKRSQPKKPKPDDPKSPGEGAAGAAILEEAGGGVKEEAALEADPEEEEEEPQSLPQGRDAEGAEEDGRGKLRPAKSKSERKKKSCGPLHPHQLPPPLPPQFPMEEAPLLESPAPAPGPEATEESPPPPPLNVVPPEAPGEEPEAKPRPIIPMLYVVPRPGPTTGDKGRVSCQQASEHFAQKGPTWKEQVAPMELTGPEEESGAGEVQAPATFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGDEDVGDPEALRSLLSLQWKNKAANFQAERKFNAAAALTEPYCAICTLFYPYSQSLQTEKETPQASLGEGPSATPPSKSGQKTRPLIPEMCFISSGENTEPLPANSYIGDDGTSLLIACAKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGSHNVQVLRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRDCVRLGPPPEGEFVELRWTDGNIYRAKFISSVTSHIYQVEFEDGSQLTVKRGDLFTLDEELPKRVRSRLSVSTGAPQENVFSGEEVKAAKRPRVGTPRAAEDSGRNPDYLAFMESLLQAQCRPGASF", "length": 1116, "header": "tr|I3LBN0-1|I3LBN0_PIG Isoform 1 of Lysine-specific demethylase 4B OS=Sus scrofa OX=9823 GN=KDM4B PE=3 SV=2 CANONICAL=I3LBN0-1" }, "locus": { "chromosome": "2", "start_pos": 73841907, "end_pos": 73748056, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041912.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041912.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047501.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047501.1" } ] } }, { "isoform_ac": "I3LP33-1", "url": "https://www.uniprot.org/uniprotkb/I3LBN0/entry#I3LP33-1", "sequence": { "sequence": "MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSASRASLKAKLLRRSHRKRSQPKKPKPDDPKSPGEGAAGAAILEEAGGGVKEEAALEADPEEEEEEPQSLPQGRDAEGAEEDGRGKLRPAKSKSERKKKSCGPLHPHQLPPPLPPQFPMEEAPLLESPAPAPGPEATEESPPPPPLNVVPPEAPGEEPEAKPRPIIPMLYVVPRPGPTTAGEVQAPATFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGDEDVGDPEALRSLLSLQWKNKAANFQAERKFNAAAALTEPYCAICTLFYPYSQSLQTEKETPQASLGEGPSATPPSKSGQKTRPLIPEMCFISSGENTEPLPANSYIGDDGTSLLIACAKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGSHNVQVLRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRDCVRLGPPPEGEFVELRWTDGNIYRAKFISSVTSHIYQVEFEDGSQLTVKRGDLFTLDEELPKRVRSRLSVSTGAPQENVFSGEEVKAAKRPRVGTPRAAEDSGRNPDYLAFMESLLQAQCRPGASF", "length": 1043, "header": "tr|I3LP33-1|I3LP33_PIG Computationally mapped isoform of Lysine-specific demethylase 4B OS=Sus scrofa OX=9823 GN=KDM4B PE=3 SV=3 CANONICAL=I3LBN0-1" }, "locus": { "chromosome": "2", "start_pos": 73841907, "end_pos": 73748056, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026522.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026522.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025858.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025858.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 570, "start_aa": "Thr", "end_pos": 570, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr570", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 735, "start_aa": "Thr", "end_pos": 735, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr735", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738761", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738761", "resource": "KEGG Pathway" }, { "id": "R-SSC-3214842", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3214842", "resource": "Reactome", "description": "HDMs demethylate histones" }, { "id": "R-SSC-5693565", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5693565", "resource": "Reactome", "description": "Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks" }, { "id": "R-SSC-9018519", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9018519", "resource": "Reactome", "description": "Estrogen-dependent gene expression" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BA41-1", "protein_name": "Lysine-specific demethylase 4B", "gene_name": "KDM4B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSASRASLKAKLLRRQISLKENRHWKKTEEERKPSLERKKEQTRRPGLSSHRKRSQPKKPKPDDPRSPGEGAAGVALLEEAGGSTKEEAAPEADPEEEEEEAQLLPQGREAEGSEEDGRGKLRLAKAKSDRKKKSYGSLHPHHPLLPPPPSSQFTEEAPLLDIPGPAPGLEAAEESPLPPPLNVVPPKAPGEEPEAKPRPVIPMLYVVPRPGPTGNKGRVSCQQASEHFAQKGPTWKEQATPMELTGPEEESGASEGQNPSTFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEESFPFSGDEDVGDPEALRSLMSLQWKNKASNFQAERKFNVAAALTEPYCAICTLFYPYSQSLQTEKEAPQAALGEGSSAIPPSRSGQKTRPLIPEMCFTASGENTEPLPANSYIGDDGTSPLIACAKCCLQVHASCYGIRPELVNEGWTCSRCTAHAWTAECCLCNLRGGALQMTTDRRWVHVICAIAVPEVRFLNVMERHPVDISGIPEQRWKLKCVYCRKRMKKVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGGHSVQVMRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRDCARLGPPPEGEFVELRWTDGNLYRAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLDEELPKRVRSRLSVSTGAPQESVFSGEEVKAAKRPRVGTPRAAEDSGRNPDYPAFMESLLQAQCWPGAPY", "length": 1116 }, "evidence": [ { "id": "I3LBN0", "url": "https://omabrowser.org/oma/group/I3LBN0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "M0RB75-1", "protein_name": "Lysine-specific demethylase 4B", "gene_name": "Kdm4b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGSEDHSAQNPSCKIMTFRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRSILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGRDLTVLDHTRPTALSSPELSSWSASRTSLKAKLLRRQISVKESRPWRKAEEERRPSLERRREPTRRPGPASHRRRSQPKKSKPEDSRSPGEATAGVAGLDEARGCSRRETMPEEEEEEELSPSQGHEAEGVEEDGRGKPRPTKARSKKKTPSLLSPPLLSAPPALFPAEEVLRLPPQPKSPGPAMGPMAAEGGPPPTALNVVPPGVPGEETEVRPRPIIPMLYVLPRANSSDGDREHAAHPQLAPMELGPEEEDQAQAGDSQGTTSFSKLKVEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGEDDGSDPEALRSLLSLQWKSKAASFQAERKLNAAAALSEPYCAVCTLFYPYSQSVQTEREVLATPGDSAVQPPSKSGQRTRPLIPEMCFTSSGENTEPLPANSYVGEDGTSPLISCAHCCLQVHASCYGVRPELAKEGWTCSRCAAHAWTAECCLCNLRGGALQRTTEHRWIHVICAIAVPEVRFLNVIERNPVDVSAIPEQRWKLKCVYCRKRMKRVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHRASGAGGQLLRTVSLGQIVITKNRNGLYYRCRVIGTTAQTFYEVNFDDGSYSDNLYPESITSRDCLRLGPPPEGELVELRWTDGNLYRARFISMATSLIYQVEFEDGSQLTVKRADIFTLEEELPKRVRSRLSLSTGTPQEPSFSGDGVKAAKRPRVATVLATTTEDTGRSPEYLAFMESLLQAQGQPGAPF", "length": 1099 }, "evidence": [ { "id": "I3LBN0", "url": "https://omabrowser.org/oma/group/I3LBN0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O94953-1", "protein_name": "Lysine-specific demethylase 4B", "gene_name": "KDM4B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWSASRASLKAKLLRRSHRKRSQPKKPKPEDPKFPGEGTAGAALLEEAGGSVKEEAGPEVDPEEEEEEPQPLPHGREAEGAEEDGRGKLRPTKAKSERKKKSFGLLPPQLPPPPAHFPSEEALWLPSPLEPPVLGPGPAAMEESPLPAPLNVVPPEVPSEELEAKPRPIIPMLYVVPRPGKAAFNQEHVSCQQAFEHFAQKGPTWKEPVSPMELTGPEDGAASSGAGRMETKARAGEGQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEASPFSGEEDVSDPDALRPLLSLQWKNRAASFQAERKFNAAAARTEPYCAICTLFYPYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLIPEMCFTSGGENTEPLPANSYIGDDGTSPLIACGKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHKSGGHAVQLLRAVSLGQVVITKNRNGLYYRCRVIGAASQTCYEVNFDDGSYSDNLYPESITSRDCVQLGPPSEGELVELRWTDGNLYKAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLSLSTGAPQEPAFSGEEAKAAKRPRVGTPLATEDSGRSQDYVAFVESLLQVQGRPGAPF", "length": 1096 }, "evidence": [ { "id": "I3LBN0", "url": "https://omabrowser.org/oma/group/I3LBN0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q91VY5-1", "protein_name": "Lysine-specific demethylase 4B", "gene_name": "Kdm4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSEDHSAQNPSCKIMTFRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGRDLTVLDHTRPTALSSPELSSWSASRTSIKAKLLRRQISVKESRPWRKAEEERRREPTRRPGPASHRRRSQPKKSKPEESRSPGEATAGVSTLDEARGCSRGEAMPEDEEEEELLPSQGHEAEGVEEDGRGKPRPTKARNKKKTPSPSSPPLLSAPPALFPTEEVLRPPPQPKSPGPAMGPMAAEGGPPPTPLNVVPPGAPVEEAEVRPRPIIPMLYVLPRTSSTDGDREHSAHAQLAPMELGPEEENQAQAGDSQGTTPFSKLKVEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFLFSGEDDVTDPEALRSLLSLQWKNKAASFQAERKFNAAAALSEPYCAICTLFYPYSQSVQTERDSAVQPPSKSGQRTRPLIPEMCFTSSGENTEPLPANSYVGEDGTSPLISCAHCCLQVHASCYGVRPELAKEGWTCSRCAAHAWTAECCLCNLRGGALQRTTEHRWIHVICAIAVPEVRFLNVIERNPVDVSAIPEQRWKLKCIYCRKRMKRVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHRASGAGGQLLRTVSLGQIVITKNRNGLYYRCRVIGTTAQTFYEVNFDDGSYSDNLYPESITSRDCLRLGPPPEGELVELRWTDGNLYRARFISMATSLIYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLSLSTGTPQEPSFSGDDVKAAKRPRVASVLATTTEDTGRSPEYLSFMESLLQAQGRPGAPF", "length": 1086 }, "evidence": [ { "id": "I3LBN0", "url": "https://omabrowser.org/oma/group/I3LBN0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "histone H3K36 demethylase activity", "id": "GO:0051864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051864", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "histone H3K9 demethylase activity", "id": "GO:0032454", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032454", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "histone H3K9me2/H3K9me3 demethylase activity", "id": "GO:0140684", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140684", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "pericentric heterochromatin", "id": "GO:0005721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005721", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "brain development", "id": "GO:0007420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007420", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "I3LBN0", "url": "https://www.uniprot.org/uniprotkb/I3LBN0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 125, "end_pos": 127, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "60200", "name": "", "equation": "N(6),N(6),N(6)-trimethyl-L-lysyl(9)-[histone H3] + 2 2-oxoglutarate + 2 O2 = N(6)-methyl-L-lysyl(9)-[histone H3] + 2 formaldehyde + 2 succinate + 2 CO2", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "60200", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/60200" } ] }, { "id": "R-SSC-4724279", "name": "KDM4A, KDM4B, KDM4C, KDM4D demethylate Me2K10-histone H3", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-4724279", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4724279" } ] }, { "id": "R-SSC-5661120", "name": "KDM4A, KDM4B, KDM4C, KDM4D, MINA demethylate Me3K10-histone H3", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5661120", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5661120" } ] }, { "id": "R-SSC-5682586", "name": "HERC2 and PIAS4 are recruited to DNA DSBs", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5682586", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682586" } ] }, { "id": "R-SSC-5682588", "name": "RNF8 binds phosphorylated MDC1 at DNA DSBs", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5682588", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682588" } ] }, { "id": "R-SSC-5682598", "name": "ATM phosphorylates HERC2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5682598", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682598" } ] }, { "id": "R-SSC-5682607", "name": "PIAS4 SUMOylates HERC2 with SUMO1 at DNA DSBs", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5682607", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682607" } ] }, { "id": "R-SSC-5682858", "name": "RNF8 and RNF168 ubiquitinate H2AFX", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5682858", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682858" } ] }, { "id": "R-SSC-5682863", "name": "RNF168 binds DNA DSBs", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5682863", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682863" } ] }, { "id": "R-SSC-5682992", "name": "KDM4A,B bind H4K20Me2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5682992", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5682992" } ] }, { "id": "R-SSC-5683077", "name": "RNF8 and RNF168 ubiquitinate KDM4A,B", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5683077", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5683077" } ] }, { "id": "R-SSC-9011949", "name": "KDM4B demethylates H3K9me3 on estrogen-responsive target enhancers", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9011949", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9011949" } ] }, { "id": "R-SSC-9011952", "name": "ESR1:ESTG and KDM4B bind H3K9me3 target gene enhancers", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"MPAMRGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKALDEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISDTKNRGGPDSWKERGGGRRRYGRAGSKGFNANRRRSRAVLYHLSGHLQKQPKGKHKLNKGVFGEKPNLPEYKVAAIRKSPFILLHCGALRATWDGFILLATLYVAVTVPYSVCVSTAREPSAARGPPSVCDLAVEVLFILDIVLNFRTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYFGAHLLKTVRLLRLLRLLPRLDRYSQYSAVVLTLLMAVFALLAHWVACVWFYIGQREIESSASELPEIGWLQELARRLETPYYLVGRSPAVGNSSGQSDNCSSSGSEANRTGPELLGGPSLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHAVVFGNVTAIIQRMYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDTTELLQSLPDELRADIAMHLHKEVLQLPLFEAASRGCLRTLSLALRPAFCTPGEYLIHQGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIGCELPRREQVVKANADVKGLTYCVLQCLQLAGLHESLALYPEFAPRFSRSLRGELSYNLGAGGGPAEADTSSLSGDNTLMSTLEEKETDGEQGPATSPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTRPRLGGRGRPGRAAASQAEAGPPAHPRSLEGLRLPSVPWNVPPDLSPRVVDGIEDGCGSDQPKFSFRMRQSGPECSSSPSPGPENSLLTVPLGPSEVRSTDTLDKLRQAVMELSEQVLQMREGLQSLRQAVQLVLAPHGEGPCPRPSGEGPCPAGASGLLQPLCVDTGTSSYCLQPPAGSVLSGTWPHPRPGPSPLVAPWPWGPPASQSSPWPRATAFWTSTSDSEPPGSGERCPEPSTPGSPPPEDGARTGPPEPANQAEAASTGEPPPGAGGLALPWEPHSLEMVLIGCHGSGTVQWTQEEGTGV", "length": 1081, "header": "tr|I3LBQ7-1|I3LBQ7_PIG Isoform 1 of Voltage-gated inwardly rectifying potassium channel KCNH3 OS=Sus scrofa OX=9823 GN=KCNH3 PE=3 SV=2 CANONICAL=I3LBQ7-1" }, "isoforms": [ { "isoform_ac": "I3LBQ7-1", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7/entry#I3LBQ7-1", "sequence": { "sequence": "MPAMRGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKALDEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISDTKNRGGPDSWKERGGGRRRYGRAGSKGFNANRRRSRAVLYHLSGHLQKQPKGKHKLNKGVFGEKPNLPEYKVAAIRKSPFILLHCGALRATWDGFILLATLYVAVTVPYSVCVSTAREPSAARGPPSVCDLAVEVLFILDIVLNFRTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYFGAHLLKTVRLLRLLRLLPRLDRYSQYSAVVLTLLMAVFALLAHWVACVWFYIGQREIESSASELPEIGWLQELARRLETPYYLVGRSPAVGNSSGQSDNCSSSGSEANRTGPELLGGPSLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHAVVFGNVTAIIQRMYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDTTELLQSLPDELRADIAMHLHKEVLQLPLFEAASRGCLRTLSLALRPAFCTPGEYLIHQGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIGCELPRREQVVKANADVKGLTYCVLQCLQLAGLHESLALYPEFAPRFSRSLRGELSYNLGAGGGPAEADTSSLSGDNTLMSTLEEKETDGEQGPATSPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTRPRLGGRGRPGRAAASQAEAGPPAHPRSLEGLRLPSVPWNVPPDLSPRVVDGIEDGCGSDQPKFSFRMRQSGPECSSSPSPGPENSLLTVPLGPSEVRSTDTLDKLRQAVMELSEQVLQMREGLQSLRQAVQLVLAPHGEGPCPRPSGEGPCPAGASGLLQPLCVDTGTSSYCLQPPAGSVLSGTWPHPRPGPSPLVAPWPWGPPASQSSPWPRATAFWTSTSDSEPPGSGERCPEPSTPGSPPPEDGARTGPPEPANQAEAASTGEPPPGAGGLALPWEPHSLEMVLIGCHGSGTVQWTQEEGTGV", "length": 1081, "header": "tr|I3LBQ7-1|I3LBQ7_PIG Isoform 1 of Voltage-gated inwardly rectifying potassium channel KCNH3 OS=Sus scrofa OX=9823 GN=KCNH3 PE=3 SV=2 CANONICAL=I3LBQ7-1" }, "locus": { "chromosome": "5", "start_pos": 15516644, "end_pos": 15495251, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024572.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024572.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021478.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021478.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1013, "start_aa": "Thr", "end_pos": 1013, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1013", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 241, "start_aa": "Thr", "end_pos": 241, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr241", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBQ7", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514837", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514837", "resource": "KEGG Pathway" }, { "id": "R-SSC-1296072", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1296072", "resource": "Reactome", "description": "Voltage gated Potassium channels" } ], "orthologs": [ { "uniprot_canonical_ac": "E1B760-1", "protein_name": "Voltage-gated inwardly rectifying potassium channel KCNH3", "gene_name": "KCNH3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPAMRGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKALDEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDSWKESGGGRRRYGRAGSKGFNANRRRSRAVLYHLSGHLQKQPKGKHKLNKGVFGEKPNLPEYKVAAIRKSPFILLHCGALRATWDGFILLATLYVAVTVPYSVCVSTAREPSAARGPPSVCDLAVEVLFILDIVLNFRTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYFGAHLLKTVRLLRLLRLLPRLDRYSQYSAVVLTLLMAVFALLAHWVACVWFYIGQREIESSASELPEIGWLQELARRLETPYYLVGRSPAAGNSSGQSDNCSSSFGEANRTGPELLGGPSLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHAVVFGNVTAIIQRMYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDTTELLQSLPDELRADIAMHLHKEVLQLPLFEAASRGCLRALSLALRPAFCTPGEYLIHQGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIGCELPRREQVVKANADVKGLTYCVLQCLQLAGLHESLALYPEFAPRFSRGLRGELSYNLGAGGGPAEADTSSLSGDNTLMSTLEEKETDGEQGPAASPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTVPRSRLGGRGRPGRAGALQAEAGPSTHPRSLEGLRLPPVPWNVPPDLSPRVVDGIEDGCGSDQPQFSFRVRQSGPECSSSPSPGPENGLLTVPLGPSEVRNTDTLDKLRQAVMELSEQVLQMREGLQSLRQAVQLVLAPRGEGPCPAGASGLLQPLCVDTGASSCCLQPSAGSVLSGTWPHPRPGPPPLMAPWPWGPPASQSSPWPRATAFWTSTSDSEPPGSGELCPEPSTPGLPPPEEGARTGPPEPMTQAEAASTGEPPPASGGHALPWEPHSLEMVLIGCHGSGTVQWTQEEGTGV", "length": 1074 }, "evidence": [ { "id": "I3LBQ7", "url": "https://omabrowser.org/oma/group/I3LBQ7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O89047-1", "protein_name": "Voltage-gated inwardly rectifying potassium channel KCNH3", "gene_name": "Kcnh3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPAMRGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKALDEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDNWKERGGGRRRYGRAGSKGFNANRRRSRAVLYHLSGHLQKQPKGKHKLNKGVFGEKPNLPEYKVAAIRKSPFILLHCGALRATWDGFILLATLYVAVTVPYSVCVSTAREPSAARGPPSVCDLAVEVLFILDIVLNFRTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYVGAHLLKTVRLLRLLRLLPRLDRYSQYSAVVLTLLMAVFALLAHWVACVWFYIGQQEIENSESELPEIGWLQELARRLETPYYLVSRSPDGGNSSGQSENCSSSGGGSEANGTGLELLGGPSLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHAVVFGNVTAIIQRMYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDTTELLQSLPDELRADIAMHLHKEVLQLPLFEAASRGCLRALSLALRPAFCTPGEYLIHQGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIGCELPQREQVVKANADVKGLTYCVLQCLQLAGLHESLALYPEFAPRFSRGLRGELSYNLGAGGVSAEVDTSSLSGDNTLMSTLEEKETDGEQGHTISPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRGRPSRAGVLKPEAGPSAHPRTLDGLQLPPMPWNVPPDLSPRVVDGIEDGCGSDQHKFSFRVGQSGPECSSSPSPGTESGLLTVPLVPSEARNTDTLDKLRQAVTELSEQVLQMREGLQSLRQAVQLILVPQGEGQCPRVSGEGPCPATASGLLQPLRVDTGASSYCLQPPAGSVLSGTWPHPRPGHPPPLMAPWPWGPPASQSSPWPRATALWTSTSDSEPPGSGDLCSEPSTPASPPPPEEGARTGTPAPVSQAEATSTGEPPPGSGGRALPWDPHSLEMVLIGCHGPGSVQWTQEEGTGV", "length": 1087 }, "evidence": [ { "id": "I3LBQ7", "url": "https://omabrowser.org/oma/group/I3LBQ7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ULD8-1", "protein_name": "Voltage-gated inwardly rectifying potassium channel KCNH3", "gene_name": "KCNH3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPAMRGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKALDEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDRWKETGGGRRRYGRARSKGFNANRRRSRAVLYHLSGHLQKQPKGKHKLNKGVFGEKPNLPEYKVAAIRKSPFILLHCGALRATWDGFILLATLYVAVTVPYSVCVSTAREPSAARGPPSVCDLAVEVLFILDIVLNFRTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYFGAHLLKTVRLLRLLRLLPRLDRYSQYSAVVLTLLMAVFALLAHWVACVWFYIGQREIESSESELPEIGWLQELARRLETPYYLVGRRPAGGNSSGQSDNCSSSSEANGTGLELLGGPSLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHAVVFGNVTAIIQRMYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDTTELLQSLPDELRADIAMHLHKEVLQLPLFEAASRGCLRALSLALRPAFCTPGEYLIHQGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIGCELPRREQVVKANADVKGLTYCVLQCLQLAGLHDSLALYPEFAPRFSRGLRGELSYNLGAGGGSAEVDTSSLSGDNTLMSTLEEKETDGEQGPTVSPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRGRPGRAGALKAEAGPSAPPRALEGLRLPPMPWNVPPDLSPRVVDGIEDGCGSDQPKFSFRVGQSGPECSSSPSPGPESGLLTVPHGPSEARNTDTLDKLRQAVTELSEQVLQMREGLQSLRQAVQLVLAPHREGPCPRASGEGPCPASTSGLLQPLCVDTGASSYCLQPPAGSVLSGTWPHPRPGPPPLMAPWPWGPPASQSSPWPRATAFWTSTSDSEPPASGDLCSEPSTPASPPPSEEGARTGPAEPVSQAEATSTGEPPPGSGGLALPWDPHSLEMVLIGCHGSGTVQWTQEEGTGV", "length": 1083 }, "evidence": [ { "id": "I3LBQ7", "url": "https://omabrowser.org/oma/group/I3LBQ7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9WVJ0-1", "protein_name": "Voltage-gated inwardly rectifying potassium channel KCNH3", "gene_name": "Kcnh3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPAMRGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKALDEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDNWKERGGGRRRYGRAGSKGFNANRRRSRAVLYHLSGHLQKQPKGKHKLNKGVFGEKPNLPEYKVAAIRKSPFILLHCGALRATWDGFILLATLYVAVTVPYSVCVSTAREPSAARGPPSVCDLAVEVLFILDIVLNFRTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYVGAHLLKTVRLLRLLRLLPRLDRYSQYSAVVLTLLMAVFALLAHWVACVWFYIGQQEIESSESELPEIGWLQELARRLETPYYLVSRSPDGGNSSGQSENCSSSSSSSGSGGGRGSEANGTGLELLGGPSLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHAVVFGNVTAIIQRMYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDTTELLQSLPDELRADIAMHLHKEVLQLPLFEAASRGCLRALSLALRPAFCTPGEYLIHQGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIGCELPQREQVVKANADVKGLTYCVLQCLQLAGLHESLALYPEFAPRFSRGLRGELSYNLGAGGVSAEVDTSSLSGDNTLMSTLEEKETDGEQGHTVSPAPADEPSSPLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRGRPSRAGVLKPEAGPSAHPRSLDGLQLPPMPWNVPPDLSPRVVDGIEDGCSSDQPKFSFRVGQSGPECSSSPSPGTESGLLTVPLGPSEARNTDTLDKLRQAVMELSEQVLQMREGLQSLRQAVQLILVPQGEGQCPRGSGEEPCPATASGLLQPLRVDTGASSYCLQPPAGSVLSGTWPHPRPGQPPPLMAPWPWGPPASQSSPWPRATALWTSTSDSEPPGSGDLCSEPSTPASPPPSEEGARTGTPAPVSQAEATSTGEPPPGPGGRALPWDPHSLEMVLIGCHGPGTVQWTQEEGTGV", "length": 1095 }, "evidence": [ { "id": "I3LBQ7", "url": "https://omabrowser.org/oma/group/I3LBQ7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LBQ7", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" } ], "pmid": "" }, { "name": "monoatomic ion channel complex", "id": "GO:0034702", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034702", "evidence": [ { "database": "UniProtKB", "id": "I3LBQ7", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "regulation of membrane potential", "id": "GO:0042391", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042391", "evidence": [ { "database": "UniProtKB", "id": "I3LBQ7", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" } ], "pmid": "" }, { "name": "potassium ion transmembrane transport", "id": "GO:0071805", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071805", "evidence": [ { "database": "UniProtKB", "id": "I3LBQ7", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "voltage-gated potassium channel activity", "id": "GO:0005249", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005249", "evidence": [ { "database": "UniProtKB", "id": "I3LBQ7", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" } ], "pmid": "" }, { "name": "inward rectifier potassium channel activity", "id": "GO:0005242", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005242", "evidence": [ { "database": "UniProtKB", "id": "I3LBQ7", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 421, "end_pos": 423, "annotation": "n_glycosylation_sequon" }, { "start_pos": 428, "end_pos": 430, "annotation": "n_glycosylation_sequon" }, { "start_pos": 437, "end_pos": 439, "annotation": "n_glycosylation_sequon" }, { "start_pos": 471, "end_pos": 473, "annotation": "n_glycosylation_sequon" }, { "start_pos": 500, "end_pos": 502, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "29463", "name": "", "equation": "K(+)(in) = K(+)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "29463", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/29463" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LBQ7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1081, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LBQ7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LBQ7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LBQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" }, { "id": "PS50042", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50042" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Cyclic nucleotide-binding", "eco_id": "ECO_0000259", "start_pos": 583, "end_pos": 647, "start_aa": "Leu", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LBQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBQ7" }, { "id": "PS50113", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50113" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PAC", "eco_id": "ECO_0000259", "start_pos": 93, "end_pos": 145, "start_aa": "Phe", "end_aa": "Trp", "glycosite_overlap": "" }, { "evidence": [ { 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"authors" ] } ] }, { "uniprot_canonical_ac": "I3LBV6-1", "uniprot_ac": "I3LBV6", "uniprot_id": "I3LBV6_PIG", "mass": { "chemical_mass": 78125.0, "monoisotopic_mass": 78125.0 }, "refseq": { "ac": "XP_003127589", "name": "polynucleotide 5'-hydroxyl-kinase NOL9", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127589" }, "gene_names": [ { "name": "NOL9", "type": "recommended", "evidence": [ { "id": "I3LBV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ] }, { "name": "NOL9", "type": "synonym", "evidence": [ { "id": "XP_003127589", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127589" } ] } ], "protein_names": [ { "name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "type": "recommended", "evidence": [ { "id": "I3LBV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBV6/entry#names_and_taxonomy" } ] }, { "name": "2.7.1.78", "type": "synonym", "evidence": [ { "id": "I3LBV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBV6/entry#names_and_taxonomy" } ] }, { "name": "Nucleolar protein 9", "type": "synonym", "evidence": [ { "id": "I3LBV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBV6/entry#names_and_taxonomy" } ] }, { "name": "polynucleotide 5'-hydroxyl-kinase NOL9", "type": "synonym", "evidence": [ { "id": "XP_003127589", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127589" } ] } ], "function": [ { "annotation": "Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of single-stranded and double-stranded RNA and DNA substrates. Involved in rRNA processing and its kinase activity is required for the processing of the 32S precursor into 5.8S and 28S rRNAs, more specifically for the generation of the major 5.8S(S) form. Required for the efficient pre-rRNA processing of internal transcribed spacer 2 (ITS2). Associates with LAS1L to form an ITS2 pre-rRNA endonuclease-kinase complex and is responsible for the transport of this complex into the nucleolus.", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6#function" }, { "database": "UniProtKB", "id": "ARBA00055967", "url": "https://www.uniprot.org/uniprotkb/ARBA00055967#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NOL9", "url": "https://www.uniprot.org/uniprotkb/I3LBV6", "locus": { "chromosome": "6", "start_pos": 67375196, "end_pos": 67396430, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030253", "url": "https://www.ensembl.org/id/ENSSSCG00000030253" } ] } } ], "crossref": [ { "id": "ENSSSCG00000030253", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030253", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518312", "url": "https://www.ncbi.nlm.nih.gov/gene/100518312", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032319", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032319", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057570", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057570", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057573", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057573", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518312", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518312", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YFGETSC", "url": "https://omabrowser.org/oma/group/YFGETSC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LBV6", "url": "https://www.orthodb.org/?gene=I3LBV6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12755", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12755", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12755:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12755:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16575", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16575", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24419", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24419", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25467", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25467", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6791226", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6791226", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003127589", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127589", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "15669", "url": "https://www.rhea-db.org/rhea/15669", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "54580", "url": "https://www.rhea-db.org/rhea/54580", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBV6-1", "url": "https://www.uniprot.org/uniprotkb/I3LBV6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADSVLVLKRGSSRSTWLRARKARSQLILGHRPRRRLRTLRWCGRRRLRRRLLHAQAAGVDWREGGCLVSRAAAPRRPKTAVPRPDPSPDVAADLTTSCSAILSIPPVRPAGPGRALVLLPLGQSFIFSGICRVTCLYGQVQVLGFNISQGQPAQDVYSTYTHARLTVTAVHYSVSEKSKKEMKREARTLLKSHLNRDDRRWLMKNFSPLCSVMMLEHLKTSTVNFITSHPGLSYVFVQEVPPFQINLEYFTLRSVGIRREKKKTGLRLTESAFSVMEELVSVSCEEVDGCPVILVCGSQDVGKSTFIRYLMNQLLNSIPCIDYLECDLGQTEFTPPGCVSLLNITEPVLGPPFTHQRTPQKMVYYGKTSCKDNFENYIEIIKYVFSSYKREAPLIVNTMGWVADKGLLLLVDLIRLLSPSHVVQFSSSRSKYMPNLTPDYVDDMDGLYTKSKSKVRNRGFHLAEFAEHLEFADEEKESPLVFPGYKLMSVKSEFVSRKTERNRESHNKILRDLAVLGYLGQLQPPVPKPLCPLHGLTPYQVPFNAVALRVTHADVAPTHILYAVNASWVGLCKILDDVRGYAHGPILLAQTPICDCLGFGICRGVDMEKRLYHILTPVPPEQLRLVNCLLVGAISIPQCVLKSQRGLEGTIPYVTTDYNFKLPGASEKIGAREIKETQREKVHPKPKLYRNTH", "length": 694, "header": "tr|I3LBV6-1|I3LBV6_PIG Isoform 1 of Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Sus scrofa OX=9823 GN=NOL9 PE=3 SV=1 CANONICAL=I3LBV6-1" }, "isoforms": [ { "isoform_ac": "I3LBV6-1", "url": "https://www.uniprot.org/uniprotkb/I3LBV6/entry#I3LBV6-1", "sequence": { "sequence": "MADSVLVLKRGSSRSTWLRARKARSQLILGHRPRRRLRTLRWCGRRRLRRRLLHAQAAGVDWREGGCLVSRAAAPRRPKTAVPRPDPSPDVAADLTTSCSAILSIPPVRPAGPGRALVLLPLGQSFIFSGICRVTCLYGQVQVLGFNISQGQPAQDVYSTYTHARLTVTAVHYSVSEKSKKEMKREARTLLKSHLNRDDRRWLMKNFSPLCSVMMLEHLKTSTVNFITSHPGLSYVFVQEVPPFQINLEYFTLRSVGIRREKKKTGLRLTESAFSVMEELVSVSCEEVDGCPVILVCGSQDVGKSTFIRYLMNQLLNSIPCIDYLECDLGQTEFTPPGCVSLLNITEPVLGPPFTHQRTPQKMVYYGKTSCKDNFENYIEIIKYVFSSYKREAPLIVNTMGWVADKGLLLLVDLIRLLSPSHVVQFSSSRSKYMPNLTPDYVDDMDGLYTKSKSKVRNRGFHLAEFAEHLEFADEEKESPLVFPGYKLMSVKSEFVSRKTERNRESHNKILRDLAVLGYLGQLQPPVPKPLCPLHGLTPYQVPFNAVALRVTHADVAPTHILYAVNASWVGLCKILDDVRGYAHGPILLAQTPICDCLGFGICRGVDMEKRLYHILTPVPPEQLRLVNCLLVGAISIPQCVLKSQRGLEGTIPYVTTDYNFKLPGASEKIGAREIKETQREKVHPKPKLYRNTH", "length": 694, "header": "tr|I3LBV6-1|I3LBV6_PIG Isoform 1 of Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Sus scrofa OX=9823 GN=NOL9 PE=3 SV=1 CANONICAL=I3LBV6-1" }, "locus": { "chromosome": "6", "start_pos": 67396398, "end_pos": 67378311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027328.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027328.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021528.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021528.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518312", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518312", "resource": "KEGG Pathway" }, { "id": "R-SSC-6791226", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6791226", "resource": "Reactome", "description": "Major pathway of rRNA processing in the nucleolus and cytosol" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5YBW7-1", "protein_name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "gene_name": "Nol9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAESEVMLRRVPSRSSWQRVRKARPHLLLSRRGRRRFGVLTRGELRRLRRRLLRAHALGGDWKLGVPAGAHVAVKCKIRTRSRPGSRSQPTPSVPPVPCTRVGSCSLLNPRNHSTPQSRAGRRVLKVSPNITQPTLDLGSGRVLLMLPPGEGFTFSGICRVTCIYGQLEIYGHIIKQGQPPQDVFSVYTHSYLTINGVPYSEPEKSKKGIRREIRALLKPYMKLDDRNWVVRYFPPLGSILILERLQTRLVDFLRTYKCASYVLLQENILVRDNSEFVALNKIGIRRQKRKKGICLSESGLCALEELISVSCVDGCPVILLCGACDIGKSTFSRILINHLLNSIPGVDYLECDLGQTEFTPPGCISLLNITEPLLGPPYTHQRKPQKMVYFGKTNCHNEYENYIEIVKYVFRDYKREFPLIINTMGWVSGDGLLLLVDLIRVLSPNYVVQLTSDRSEPMQPLTSEFVELTDGLYTKSKIKRYRGFEIPEFGDSLGFAEEEKESSPVPVFTGHILLTVYSEFLSSKNEKNRGKYNRIFRDLAVLGYLSQLMLPVTEPLCPLHSLTPYQVPFNAVAIRVTHADVAPTHILYAMNASWVGLCKIVDDMKGYTRGPILLAQNPICDCLGFGICRGIDMDKRLYHILTPLPPEELRTVNCLLVGTISIPHCIFKNQPGTEGTVPYVTRDYNLKLLGASEKIGEREYRNILPRHKSRQRRK", "length": 715 }, "evidence": [ { "id": "I3LBV6", "url": "https://omabrowser.org/oma/group/I3LBV6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0Z2D6-1", "protein_name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "gene_name": "NOL9", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPARRGRPRRAPSRGSAGEGRAEAAWREFAASFARAGMVPPGGAGLAAVEAAEGAAVLLLGPQQALTFSGKCRLTCLYGAVRVLGFAVGPHQPPLPLLSPPTHCALSLEALPAARASHADPRQLRTAARSALRAHRVRRQARVKVMARFSPECAVVLLEHLDTAVTRFLLSLPPLCRLFEPQVSRAPTPRRPDGRRAQREDEPDVTAEAAVLAAVGIVPCSPERGLLLSDSTLRALQELVRVCCVEDEGVPVIMVCGPKSIGKSTFNRYLINLLLNHLPSVEYMECDIGQTEFTPPGCVSLSNVTEPFLGPPFTHQRTPRKMVYYGQTSCEQDTERYIDVVKYVFSSYRKEVPLVINTMGWVKGEGLLLLTDMIRLLSPTHVVQMDVYDWKAMAPLTPENVHLAPGLYTKGKQQAKGKRMDLSAAESWKCSEGEEDASAPEYKLLYVHPEFPRAGAAGEARVHSSILRDMSILGYLGQLQPPDVASVLPLHSLVPYQVPFSAVALRVIHTDVAPTNIMYAVNASWVGLCRIPDEIRCQTAGPVLLTQTPICDCLGFGIVRGVDMEKHLYHILTPVPPENLRTVNCLLLGNIAIPNCIFVSQEGIEGEIPYVTSDYNYSILGSGKLRKKKHFKKREHTFQCDYT", "length": 643 }, "evidence": [ { "id": "I3LBV6", "url": "https://omabrowser.org/oma/group/I3LBV6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BPN0-1", "protein_name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "gene_name": "NOL9", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MADSLLLLKRVPSRHTWLRARKARPQLMLSRRPRRRLRNLRWRSRRRLRRRLLQAQAAGADWLQGGCLVSGDAALQRLKTSARRRASSPEPAEDPVPSGPAILPIPPVRPAGSGRAVLLLPLGQGFTFSGICCVTCLYGQVQVFGFTISQGQPAQNVFSTYTHSRLTINAVHYSVHEKSKKEMKREARVLLRPYLNQDDRYCLMSSFSPLCSIVLLERLKTSTVNFIISHPGLSYIFVQEVRTFQINSEYFALRSVGIRREKKKTGLRLTESAFAVMEELVSISSEEADSCPVILVCGCQDIGKSTFNRYLINQLLNSVSCVDYLECDLGQTEFTPPGCISLLNITEPVLGPPFTHQRTPQKMVYYGKTSCKNNFENYIEVIKYVFSSYKRESPLIINTMGWVADQGLLLLIDLIRLLSPSHVVQFSSDRSKYMPDLTPDFVDDMDGLYTRRRSRVRNRGFHLPEFAESLEFADEEKEGPVMSTGYKLMFVKSEFVTGKTSRNRESHNRILRELAVLGYLSQLQPPVPKPLRALHGLTPYQVPFNAVALRIIHADVAPTHILYAVNASWVGLCKILDDVRGYASGPILLAQSPICDCVGFGICRGIDMEKKLYHILTPVPPEELRHVNCLLVGAVNIPQCVLKSQGGLEGTIPYVTTDYNFKLPGASEKIGARESGATYKEKGHPKPKFYRKTY", "length": 694 }, "evidence": [ { "id": "I3LBV6", "url": "https://omabrowser.org/oma/group/I3LBV6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F654-1", "protein_name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "gene_name": "nol9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTMKVHKVHSRSQQRQRNASKQHGKNKWNKKVRSLDSTLLNTSSGTAKLEQEIAKKEKPAIKRLKKLYAKPVTLLSDNNCADEDKVKPTSVTFAHVHTNGGTELDDSSRSVDSQEWSEYANSVLQNGMETSTLPDSDQAEDGLQFHAHLDHTKNRAVLVMKQSQVLCFRGKCLLTCLYGHVEVLGFTIEEGQQPYPVFSPPTHCPLTITALGNNQSSSKNKKEGQLEAKAIVRKYFTTEPSKKLMNEVDSDSCVVLLESLDTPLTRFLSSFSELTELFGLNSKELKSQAAIYSPVLSAVGVTALRGPCAQGLVMSRSYKETISSLLSAWAGEFDRCPIILVCGGKSSGKSTFNRHLINSLLNHTASVEYLECDLGQTEFTPPGCLSLCTVTEPLLGPPFTHLRDPEHMVYYGQADCQSDIDRYLESLKSLWRNVSGESPVIINTMGWIRGHGFQILVDLVRLFSVTHVVQLSYGTAPQCQLLTSEFIRSAHGWQTHPPTTPALTEDSHSPSRSHVFLSVQSEFEGAGVSGEMRFQRSNELRDLALLSYISKLQSSDPGPIRPLHCFIPYQVPHSSVAIGVTHCEVAPNNILYAANASVVGLCCLSEKVVGRGGPVILSQTPICQCVGLGVLRGVDMGRGLYFLVTPVSPSVLKHVNCLLLGEISLPKILLTQQHGVEGDLPYITTDYSFEVQGAGKLHIFKGLTRPGFIKSDN", "length": 713 }, "evidence": [ { "id": "I3LBV6", "url": "https://omabrowser.org/oma/group/I3LBV6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3TZX8-1", "protein_name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "gene_name": "Nol9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAESEVLHRRAPSRSSWLRVRKARPHLLLSRRGRRRFGVLTRVELRRLRRRLLRAHALGGDWKQVAPAGAHVAVKCKLRARSRPAPRSPPTPSVPPAPCTASATCSLLNPRNHSTPQSRAGRPVRKVSPNVTQPVRDLGSGRVLMMLPPGEGFTFSGICRVTCVYGQLEVYGHIINQGQPPQDVFSVYTHSYLTINGVPYAEPEKSEKAIRREIRALLKPYTKLDDRNWVVRYFPPLGSIMILERMQSRFVDFLKTYKCSSYVLLQENAPVRVNSEFTTLKKIGIRRQKRKKAICLSESGLCALEELVSVSCDGCPVILLCGACDIGKSTFNRILINQLLNSIPGVDYLECDLGQTEFTPPGCVALLTITEPLLGPPYTHQRKPQRMVYYGKMNCYNDYENYIDIVKYVFRDYKREFPLIINTMGWVSDNGLRLLVDLIRVLSPNYVVQLYSDRCKFTPTLTSEYVELTDGLYTKSKIKRYRGFEIPEFGDNLEFTYEEKESSPLPVFTGHVLLSVHSEFLSSKNEKNRAKYNRIFRDLAVLGYLSQLMLPVPESLSPLHSLTPYQVPFSAVAIRVLHADVAPTHILYAVNASWVGLCRIVDDMKGYTRGPILLAQNPICDCLGFGICRGIDMDKRTYHILTPLPPEELKTVNCLLVGSISIPHCIFQNQPGPEGSVPYVTTDYNLNIPGATEKIGEREYGKAFPRHKLRQRRK", "length": 714 }, "evidence": [ { "id": "I3LBV6", "url": "https://omabrowser.org/oma/group/I3LBV6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54Z27-1", "protein_name": "Polynucleotide 5'-hydroxyl-kinase nol9", "gene_name": "nol9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEINKNDNNNNINNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQKNNYRNYKPIKTGTLIQHQILQQTLSNFQTKNKVFQLGSDKLILIFKENETIYFHGTIQARSIIGSVEVYGYTITPQSTTYYPIYSPFCSPTLSITSNNSNNKLYTLKEIIENQLIKIPELVKNKLKENEKQIEIDEPTLAISSIIVLKILDDHCENPKMFTKKKIEIIDSFKLLKGFYPLYQPDFNTQLLTIPNEWLNLINTQFLYNDHCNNNGLSILTCGERNVGKSTFNRILINKLLKKYTHIIFIETDTGQTEFTPSGIMSIDIINSPLLGPPFTHCKNNPLKSYFFGDTSPKNNPEYFLNLSFQLIDCCNLIKQQYPNIPIILNTNGWLKSLGLHLTQEIIKYFKPTSIVQLINNNNNNNNNNNNNNNNNNNNNNNNNNLNDNLNNFINRFDSTVTFSQDCINQLFEDCDDDNDDNKNLKTTIITKLYSINSINNFSQSIYKPIFNLGSSEIRNLMFKSYFKLESKGSLSHQSPYQVSWKELKVKILTNNVPPSQTMYALNASLVGICIDEDPEKNYKYISYKVGNNLPTIINQSPLISQCIGLGLIRSIDMVNGYYYIITPIDPSLLEISNTILKGSIEIPQTLTISVSSKGKILVPYLQLDVLSSYGTGSDVMNRPSFFDD", "length": 683 }, "evidence": [ { "id": "I3LBV6", "url": "https://omabrowser.org/oma/group/I3LBV6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5SY16-1", "protein_name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "gene_name": "NOL9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MADSGLLLKRGSCRSTWLRVRKARPQLILSRRPRRRLGSLRWCGRRRLRWRLLQAQASGVDWREGARQVSRAAAARRPNTATPSPIPSPTPASEPESEPELESASSCHRPLLIPPVRPVGPGRALLLLPVEQGFTFSGICRVTCLYGQVQVFGFTISQGQPAQDIFSVYTHSCLSIHALHYSQPEKSKKELKREARNLLKSHLNLDDRRWSMQNFSPQCSIVLLEHLKTATVNFITSYPGSSYIFVQESPTPQIKPEYLALRSVGIRREKKRKGLQLTESTLSALEELVNVSCEEVDGCPVILVCGSQDVGKSTFNRYLINHLLNSLPCVDYLECDLGQTEFTPPGCISLLNITEPVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKRESPLIVNTMGWVSDQGLLLLIDLIRLLSPSHVVQFRSDHSKYMPDLTPQYVDDMDGLYTKSKTKMRNRRFRLAAFADALEFADEEKESPVEFTGHKLIGVYTDFAFRITPRNRESHNKILRDLSILSYLSQLQPPMPKPLSPLHSLTPYQVPFNAVALRITHSDVAPTHILYAVNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEELRTVNCLLVGAIAIPHCVLKCQRGIEGTVPYVTTDYNFKLPGASEKIGAREPEEAHKEKPYRRPKFCRKMK", "length": 702 }, "evidence": [ { "id": "I3LBV6", "url": "https://omabrowser.org/oma/group/I3LBV6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity", "id": "GO:0046404", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046404", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "pmid": "" }, { "name": "polynucleotide 5'-hydroxyl-kinase activity", "id": "GO:0051731", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051731", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000448", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000448", "evidence": [ { "database": "UniProtKB", "id": "I3LBV6", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 206, "end_pos": 208, "annotation": "n_glycosylation_sequon" }, { "start_pos": 344, "end_pos": 346, "annotation": "n_glycosylation_sequon" }, { "start_pos": 436, "end_pos": 438, "annotation": "n_glycosylation_sequon" }, { "start_pos": 566, "end_pos": 568, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "15669", "name": "", "equation": "a 5'-end dephospho-2'-deoxyribonucleoside-DNA + ATP = a 5'-end 5'-phospho-2'-deoxyribonucleoside-DNA + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15669", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15669" } ] }, { "id": "54580", "name": "", "equation": "a 5'-end dephospho-ribonucleoside-RNA + ATP = a 5'-end 5'-phospho-ribonucleoside-RNA + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "54580", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/54580" } ] }, { "id": "R-SSC-6791218", "name": "12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6791218", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6791218" } ] }, { "id": "R-SSC-6791219", "name": "32S pre-rRNA is nucleolytically processed at site 4 (4a) to yield 12S pre-rRNA and 28S rRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6791219", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6791219" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LBV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" }, { "id": "PF16575", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16575" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Clp1 P-loop", "eco_id": "ECO_0000259", "start_pos": 298, "end_pos": 431, "start_aa": "Gly", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LBV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" }, { "id": "PF25467", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25467" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NOL9 C-terminal", "eco_id": "ECO_0000259", "start_pos": 537, "end_pos": 638, "start_aa": "Leu", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LBV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBV6" }, { "id": "PF24419", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24419" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NOL9 N-terminal", "eco_id": "ECO_0000259", "start_pos": 117, "end_pos": 237, "start_aa": "Leu", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 147, "end_pos": 149 }, { "start_pos": 206, "end_pos": 208 }, { "start_pos": 344, "end_pos": 346 }, { "start_pos": 436, "end_pos": 438 }, { "start_pos": 566, "end_pos": 568 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LBY7-1", "uniprot_ac": "I3LBY7", "uniprot_id": "I3LBY7_PIG", "mass": { "chemical_mass": 52883.0, "monoisotopic_mass": 52883.0 }, "refseq": {}, "gene_names": [ { "name": "DPEP3", "type": "recommended", "evidence": [ { "id": "I3LBY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBY7" } ] } ], "protein_names": [ { "name": "Dipeptidase 1", "type": "recommended", "evidence": [ { "id": "I3LBY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBY7/entry#names_and_taxonomy" } ] }, { "name": "3.4.13.19", "type": "synonym", "evidence": [ { "id": "I3LBY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBY7/entry#names_and_taxonomy" } ] }, { "name": "3.5.2.6", "type": "synonym", "evidence": [ { "id": "I3LBY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBY7/entry#names_and_taxonomy" } ] }, { "name": "Beta-lactamase", "type": "synonym", "evidence": [ { "id": "I3LBY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBY7/entry#names_and_taxonomy" } ] }, { "name": "Microsomal dipeptidase", "type": "synonym", "evidence": [ { "id": "I3LBY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBY7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Independently of its dipeptidase activity, acts as an adhesion receptor for neutrophil recruitment from bloodstream into inflamed lungs and liver.", "evidence": [ { "database": "UniProtKB", "id": "I3LBY7", "url": "https://www.uniprot.org/uniprotkb/I3LBY7#function" }, { "database": "UniProtKB", "id": "ARBA00029402", "url": "https://www.uniprot.org/uniprotkb/ARBA00029402#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LBY7", "url": "https://www.uniprot.org/uniprotkb/I3LBY7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DPEP3", "url": "https://www.uniprot.org/uniprotkb/I3LBY7", "locus": { "chromosome": "6", "start_pos": 28583317, "end_pos": 28587773, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023514", "url": "https://www.ensembl.org/id/ENSSSCG00000023514" } ] } } ], "crossref": [ { "id": "I3LBY7", "url": "https://alphafold.ebi.ac.uk/entry/I3LBY7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023514", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023514", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01301", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01301", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000180", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000180", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008257", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008257", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032466", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032466", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10443", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10443", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10443:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10443:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01244", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01244", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "20401", "url": "https://www.rhea-db.org/rhea/20401", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "48616", "url": "https://www.rhea-db.org/rhea/48616", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "48940", "url": "https://www.rhea-db.org/rhea/48940", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "60520", "url": "https://www.rhea-db.org/rhea/60520", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "62704", "url": "https://www.rhea-db.org/rhea/62704", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LBY7", "url": "https://www.uniprot.org/uniprotkb/I3LBY7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBY7-1", "url": "https://www.uniprot.org/uniprotkb/I3LBY7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQPLGLKSPHALGQRPLLSLQLLLWLLLRPVTCAQTTLGARSARTMRGIPSASTRPDRAPIAPGTPGVQSLQKRARALMRDFPLVDGHNHLPSLLKQFYKNKLQGVNLRNLSLGQTSLDKLRDGLVGAQFWSAYAPCQTQDQDAVRLTLEQIDLIHRMCASYSELELVTSAKGLSSTQKLACLIGVEGGHSLDSSLSVLRSFYLLGVRYLTLTFTCSTPWAESSTKFQHHFYTNISGLTSFGEKVIGEMNRLGMMVDLSYGSDILVRQALKVSRAPVIFSHSAARAVCDNMLNVPDDILQLLKKNGGIVMVSLSMGVLQCNLFANVSTVADHFDHIRAVIGSEHIGISGNYDGSGRFPQGLEDVSTYPVLVEELLKHGWREEELQGVLRGNLLRVFRQVEQVREENSGQSPVEDEFPNRQVGKSCHSHLLTRPQHKHLATHQAGNKWPTSQAPQRPSKASPNLILGLVAAATFSILILWH", "length": 480, "header": "tr|I3LBY7-1|I3LBY7_PIG Isoform 1 of Dipeptidase 1 OS=Sus scrofa OX=9823 GN=DPEP3 PE=4 SV=4 CANONICAL=I3LBY7-1" }, "isoforms": [ { "isoform_ac": "I3LBY7-1", "url": "https://www.uniprot.org/uniprotkb/I3LBY7/entry#I3LBY7-1", "sequence": { "sequence": 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[], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LBY7", "url": "https://www.uniprot.org/uniprotkb/I3LBY7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { 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"id": "PTHR26450", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26450", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR26450:SF101", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26450:SF101", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020918014", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918014", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LC12", "url": "https://www.uniprot.org/uniprotkb/I3LC12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC12-1", "url": "https://www.uniprot.org/uniprotkb/I3LC12-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315, "header": "tr|I3LC12-1|I3LC12_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=I3LC12-1" }, "isoforms": [ { "isoform_ac": "I3LC12-1", "url": "https://www.uniprot.org/uniprotkb/I3LC12/entry#I3LC12-1", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315, "header": "tr|I3LC12-1|I3LC12_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=I3LC12-1" }, "locus": { "chromosome": "9", "start_pos": 3810146, "end_pos": 3809202, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026927.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026927.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021585.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021585.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC12", "url": "https://www.uniprot.org/uniprotkb/I3LC12" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519674", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519674", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "I3LC12", "url": "https://omabrowser.org/oma/group/I3LC12/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "I3LC12", "url": "https://www.uniprot.org/uniprotkb/I3LC12" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { "database": "UniProtKB", "id": "I3LC12", "url": "https://www.uniprot.org/uniprotkb/I3LC12" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LC12", "url": "https://www.uniprot.org/uniprotkb/I3LC12" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC12-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 315, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC12-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC12" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LC12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC12" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 43, "end_pos": 294, "start_aa": "Gly", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 5, "end_pos": 7 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC14-1", "uniprot_ac": "I3LC14", "uniprot_id": "I3LC14_PIG", "mass": { "chemical_mass": 104939.0, "monoisotopic_mass": 104939.0 }, "refseq": { "ac": "XP_005654665", "name": "ADAMTS-like protein 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654665" }, "gene_names": [ { "name": "ADAMTSL2", "type": "recommended", "evidence": [ { "id": "I3LC14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ] }, { "name": "ADAMTSL2", "type": "synonym", "evidence": [ { "id": "XP_005654665", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654665" } ] } ], "protein_names": [ { "name": "ADAMTS like 2", "type": "synonym", "evidence": [ { "id": "I3LC14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC14/entry#names_and_taxonomy" } ] }, { "name": "ADAMTS-like protein 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005654665", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654665" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADAMTSL2", "url": "https://www.uniprot.org/uniprotkb/I3LC14", "locus": { "chromosome": "1", "start_pos": 273155409, "end_pos": 273119904, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026425", "url": "https://www.ensembl.org/id/ENSSSCG00000026425" } ] } } ], "crossref": [ { "id": "I3LC14", "url": "https://alphafold.ebi.ac.uk/entry/I3LC14", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026425", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026425", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100628047", "url": "https://www.ncbi.nlm.nih.gov/gene/100628047", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000884", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000884", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013273", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013273", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036383", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036383", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045371", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045371", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050439", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050439", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100628047", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628047", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RETNEVC", "url": "https://omabrowser.org/oma/group/RETNEVC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LC14", "url": "https://www.orthodb.org/?gene=I3LC14", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13723", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13723", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13723:SF147", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13723:SF147", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00090", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00090", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05986", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05986", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19030", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19030", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19236", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19236", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5173214", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5173214", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005654665", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654665", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC14-1", "url": "https://www.uniprot.org/uniprotkb/I3LC14-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDGRWQPSRWAWSLLTMALVAGGASSTGATDNSPTSNSLEAGADATASWWGEWTKWTACSRSCGAGVTSQERHCLQQRRTSVTGAGNRTCTGTSKRYQLCRVQECPADGRSFREEQCISFNSRVYNGRTHQWKPLYPDDYVHISSKPCDLHCTTVDGQRQLMVPAHDGTSCKLADLRGVCVSGKCEPIGCDGVLFSTHTLDKCGVCQGDGSSCTHVTGNYRKGNAHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGYFFFNGNFKVDSPKNFNIAGTVVKYRRPMDVFETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQPPHAHRLQPLYYSFSEPVAQSAESVDSAELDGAGLLGFLRHNGSLYGQASSERLGLDNRLFGRRGPGIELGLSKGQETNEVCVQASGRACEGPPRGKGFRDSNTTGTALEGDQRDPEADARFASQERLSANAISDQLLGTGSDSKELAPNETVNSIFAQGGPRSSPAESLYVDYEENEGAGTYLLNGSYLQLSSDRVTNTSAEAPFPNASASLPALGGNRTQKARTRPKARKPGVSPADMYRWKLSSHEPCSATCTTGVMSTYAMCVRYDGIEVDDSYCDALTRPEPVQEFCAGRECQPRWETSSWSECSRTCGEGYQFRIVRCWKMLSPGFDSSVYSDLCEAAEAVRPEERKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRCSEDEKLCDPNTRPVGEKDCTGPPCDRQWTVSDWGPCSGSCGQGRMIRHVYCKTSDGRVVPESQCQMETKPLAIHPCGDKNCPAHWLAQDWERCNTTCGRGVKKRLVLCMELANGKPQTRSGPECGLAKKPAEESTCFERPCFKWYTSPWSECTKTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCPTEPPDDSCQDQPGTNCALAIKVNLCGHWYYSKACCRSCRPPHS", "length": 958, "header": "tr|I3LC14-1|I3LC14_PIG Isoform 1 of ADAMTS like 2 OS=Sus scrofa OX=9823 GN=ADAMTSL2 PE=4 SV=1 CANONICAL=I3LC14-1" }, "isoforms": [ { "isoform_ac": "I3LC14-1", "url": "https://www.uniprot.org/uniprotkb/I3LC14/entry#I3LC14-1", "sequence": { "sequence": "MDGRWQPSRWAWSLLTMALVAGGASSTGATDNSPTSNSLEAGADATASWWGEWTKWTACSRSCGAGVTSQERHCLQQRRTSVTGAGNRTCTGTSKRYQLCRVQECPADGRSFREEQCISFNSRVYNGRTHQWKPLYPDDYVHISSKPCDLHCTTVDGQRQLMVPAHDGTSCKLADLRGVCVSGKCEPIGCDGVLFSTHTLDKCGVCQGDGSSCTHVTGNYRKGNAHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGYFFFNGNFKVDSPKNFNIAGTVVKYRRPMDVFETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQPPHAHRLQPLYYSFSEPVAQSAESVDSAELDGAGLLGFLRHNGSLYGQASSERLGLDNRLFGRRGPGIELGLSKGQETNEVCVQASGRACEGPPRGKGFRDSNTTGTALEGDQRDPEADARFASQERLSANAISDQLLGTGSDSKELAPNETVNSIFAQGGPRSSPAESLYVDYEENEGAGTYLLNGSYLQLSSDRVTNTSAEAPFPNASASLPALGGNRTQKARTRPKARKPGVSPADMYRWKLSSHEPCSATCTTGVMSTYAMCVRYDGIEVDDSYCDALTRPEPVQEFCAGRECQPRWETSSWSECSRTCGEGYQFRIVRCWKMLSPGFDSSVYSDLCEAAEAVRPEERKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRCSEDEKLCDPNTRPVGEKDCTGPPCDRQWTVSDWGPCSGSCGQGRMIRHVYCKTSDGRVVPESQCQMETKPLAIHPCGDKNCPAHWLAQDWERCNTTCGRGVKKRLVLCMELANGKPQTRSGPECGLAKKPAEESTCFERPCFKWYTSPWSECTKTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCPTEPPDDSCQDQPGTNCALAIKVNLCGHWYYSKACCRSCRPPHS", "length": 958, "header": "tr|I3LC14-1|I3LC14_PIG Isoform 1 of ADAMTS like 2 OS=Sus scrofa OX=9823 GN=ADAMTSL2 PE=4 SV=1 CANONICAL=I3LC14-1" }, "locus": { "chromosome": "1", "start_pos": 273154906, "end_pos": 273121789, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028900.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028900.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021587.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021587.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 916, "start_aa": "Thr", "end_pos": 916, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr916", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100628047", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628047", "resource": "KEGG Pathway" }, { "id": "R-SSC-5173214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5173214", "resource": "Reactome", "description": "O-glycosylation of TSR domain-containing proteins" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A4X6-1", "protein_name": "ADAMTS-like protein 2", "gene_name": "Adamtsl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSGWQRSRWAWSLLAMAVVAGGAASTEASDNSPTSNSLEGGADATAYWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGAGNRTCVGTSKRYQLCRVQECPPDGRSFREEQCVSFNSRVYDGRAYQWKPLYPDDYMHISSKPCDLHCTTVDGQRQLMVPARDGTSCKLTDLRGVCVSGKCEVPIGCDGVLFSTHTLDKCGVCQGDGSSCTHVTGNYRKGDNHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGFYFFNGNYKVDSPKNFNIAGTVVKYRRPMDVYETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQSPHMHHLPPVYYSFSEAASESTESTERQELDSARLLGFLQHNGSLYGQPSSERLGLNSQLFPPTAPEVELGPSRGQETNEVCKQASGGVCEGPPRGKGFQDHNATGRALLGDKDDREISAHFTSHELLSANTISDQLLGTGSDSEEFSLNETMNSIFAQGAPRSSPAESLYVDYEENEGPAAYLINGSYLELNSDRINTSSEAPFPNTSASLPSLAGNRTHKARTRPKARKQGVSPADMYRWKLSSQEPCSATCTTGVMSAYAMCVRYDGVEVDDSYCDALTRPEPVHEFCAGRECQPRWETSSWSECSRTCGEGHQFRIVRCWKMLSPGFDSSVYSDLCEATEAVRPEERKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRCSEDERLCDPNTRPVGEKNCTGPPCDRQWTVSDWGPCSGSCGQGRTIRHVYCKTSDGRVVPESQCQTETKPLAIHPCGDKNCPAHWLAQDWERCNTTCGRGVKKRLVLCMELANGKPQMRSGSECGLARKPPEESTCFERPCFKWYTSPWSECTKTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCPTEPPDDSCQDQPGTNCALAIKVNLCGHWYYSKACCRSCRPPHS", "length": 958 }, "evidence": [ { "id": "I3LC14", "url": "https://omabrowser.org/oma/group/I3LC14/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BIY2-1", "protein_name": "ADAMTS like 2", "gene_name": "ADAMTSL2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEGRWQSSRWAWPLLAVALVTGSVSSTGTTDNSPTSNSLEVGPDATAYWWGEWTKWTACSRSCGAGVTSQERHCLQQRKTSVTGAGNRTCTGTSKRYQLCRVQECPPDGRSFREEQCISFNSRVYNGRRHQWKPLYPDDYVHISSKPCDLHCTTVDGQRQLMVPARDGTSCKLADLRGVCVSGKCEPIGCDGVLFSTHTLDKCGVCQGDGSSCTHVTGNYRKGNTHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGYFFFNGNFKVDSPKNFNIAGTVVKYRRPMDVYETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQPPHTHRLQPIYYSFSDPTSDSAESQELDGAGLAGFLQHNASLFGQASSERLGLDNRLFGHRGPGIELGLSRGQESNEVCAQASGRACEGPPRGKGFRDGNATLTALVGDPDDREADARFASQELLSANAISDQLLGAGSDSRELSLNETVNSIFSQGAPRGSPAESLYLDYEESEGAGAYLLNGSYLELSSDRLANTSSEAPFPNASASLPALAGNRTQKARTRPKSRKQGVSPADMYRWKLSSHEPCSSTCTTGVLSTYAMCVRYDGIEVDDSYCDALTRPEPVQEFCAGRECQPRWETSSWSECSRTCGEGYQFRIVRCWKMLSPGFDSSVYSDLCEAAEAVRPEERKTCRGPACGPQWEMSQWSECTAKCGERSVVTRDIRCSEDEKLCDPNTRPVGEKDCTGPPCDRQWTVSDWGPCSGSCGQGRMIRHVYCKTSDGRVVPESQCQMETKPLAIHPCGDKNCPAHWLAQDWERCNTTCGRGVKKRLVLCMELANGKPQTRSGPECGLAKKPPEESTCFERPCFKWYTSPWSECTKTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCPTEPPDDSCQDQPGTNCALAIKVNLCGHWYYSKACCHSCRPPPS", "length": 955 }, "evidence": [ { "id": "I3LC14", "url": "https://omabrowser.org/oma/group/I3LC14/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q7TSK7-1", "protein_name": "ADAMTS-like protein 2", "gene_name": "Adamtsl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDGRRQHPHWAWSLLAVAVVAGGAAPTEASDNSPTSNSLEGGADTTAYWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGTGNRTCVGTSKRYQLCRVQECPPDGRSFREEQCVSFNSRVYDGRAYQWKPLYPDDYVHISSKPCDLHCSTVDGQRQLTVPARDGTSCKLTDLRGVCVSGKCEPIGCDGVLFSTHTLDKCGVCQGDGSSCTHVTGNYRKGNNHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGFYFFNGNYKVDSPKNFNIAGTVVKYRRPMDVYETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQSPHMHHLPPVYYSFSEAASQSTESTERQELDSARLLGFMQHNGSLYRQTSSERLGLNSQLFQPPAPEVELGPSRGQESNEVCKQASGGVCEGPPRGKGFQDHNATGRAFSADKDDREISAHFTSHELLSANTISDQLLGTGSESEEFSLNETMNSIFAQGAPRSSPAESLYVDYEENEGPAAYLINGSYLELSSDRINTSSEAPFPNTSASPPNLAGNRTHKARTRPKARKQGVSPADMYRWKLSSHEPCSATCTTGVMSTYAMCVRYDGVEVDDSYCDALTRPEPVHEFCAGRECQPRWETSSWSECSRTCGEGHQFRIVRCWKMLSPGFDSSVYSDLCEATEAVRPEERKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRCSEDEKLCDPSTKPVGEKNCTGPPCDRQWTVSDWGPCSGSCGQGRTIRHVYCKTSDGRVVPESQCQTETKPLAIHPCGDKNCPAHWLAQDWERCNTTCGRGVKKRLVLCMELANGKPQIRSGPECGLARKPPEESTCFERPCFKWYTSPWSECTKTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCPTEPPDDSCQDQPGTNCALAIKVNLCGHWYYSKACCRSCRPPHS", "length": 957 }, "evidence": [ { "id": "I3LC14", "url": "https://omabrowser.org/oma/group/I3LC14/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q86TH1-1", "protein_name": "ADAMTS-like protein 2", "gene_name": "ADAMTSL2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDGRWQCSCWAWFLLVLAVVAGDTVSTGSTDNSPTSNSLEGGTDATAFWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGPGNRTCTGTSKRYQLCRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDYVHISSKPCDLHCTTVDGQRQLMVPARDGTSCKLTDLRGVCVSGKCEPIGCDGVLFSTHTLDKCGICQGDGSSCTHVTGNYRKGNAHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGYYFFNGNYKVDSPKNFNIAGTVVKYRRPMDVYETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQPPHESRPQPIYYGFSESAESQGLDGAGLMGFVPHNGSLYGQASSERLGLDNRLFGHPGLDMELGPSQGQETNEVCEQAGGGACEGPPRGKGFRDRNVTGTPLTGDKDDEEVDTHFASQEFFSANAISDQLLGAGSDLKDFTLNETVNSIFAQGAPRSSLAESFFVDYEENEGAGPYLLNGSYLELSSDRVANSSSEAPFPNVSTSLLTSAGNRTHKARTRPKARKQGVSPADMYRWKLSSHEPCSATCTTGVMSAYAMCVRYDGVEVDDSYCDALTRPEPVHEFCAGRECQPRWETSSWSECSRTCGEGYQFRVVRCWKMLSPGFDSSVYSDLCEAAEAVRPEERKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRCSEDEKLCDPNTRPVGEKNCTGPPCDRQWTVSDWGPCSGSCGQGRTIRHVYCKTSDGRVVPESQCQMETKPLAIHPCGDKNCPAHWLAQDWERCNTTCGRGVKKRLVLCMELANGKPQTRSGPECGLAKKPPEESTCFERPCFKWYTSPWSECTKTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCPTEPPDDSCQDQPGTNCALAIKVNLCGHWYYSKACCRSCRPPHS", "length": 951 }, "evidence": [ { "id": "I3LC14", "url": "https://omabrowser.org/oma/group/I3LC14/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ], "pmid": "" }, { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "extracellular matrix organization", "id": "GO:0030198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030198", "evidence": [ { "database": "UniProtKB", "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ], "pmid": "" }, { "name": "negative regulation of transforming growth factor beta receptor signaling pathway", "id": "GO:0030512", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030512", "evidence": [ { "database": "UniProtKB", "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microfibril binding", "id": "GO:0050436", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050436", "evidence": [ { "database": "UniProtKB", "id": "I3LC14", "url": "https://www.uniprot.org/uniprotkb/I3LC14" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" }, { "start_pos": 435, "end_pos": 437, "annotation": "n_glycosylation_sequon" }, { "start_pos": 482, "end_pos": 484, "annotation": "n_glycosylation_sequon" }, { "start_pos": 518, "end_pos": 520, "annotation": "n_glycosylation_sequon" }, { "start_pos": 531, 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"PROSITE", "url": "https://prosite.expasy.org/PS50900" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PLAC", "eco_id": "ECO_0000259", "start_pos": 919, "end_pos": 957, "start_aa": "Pro", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 916 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 374, "end_pos": 376 }, { "start_pos": 435, "end_pos": 437 }, { "start_pos": 482, "end_pos": 484 }, { "start_pos": 518, "end_pos": 520 }, { "start_pos": 531, "end_pos": 533 }, { "start_pos": 540, "end_pos": 542 }, { "start_pos": 551, "end_pos": 553 }, { "start_pos": 814, "end_pos": 816 }, { "start_pos": 87, "end_pos": 89 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC39-1", "uniprot_ac": "I3LC39", "uniprot_id": "I3LC39_PIG", "mass": { "chemical_mass": 107980.0, "monoisotopic_mass": 107980.0 }, "refseq": { "ac": "XP_020942536", "name": "chromosome transmission fidelity protein 18 homolog isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942536" }, "gene_names": [ { "name": "CHTF18", "type": "recommended", "evidence": [ { "id": "I3LC39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC39" } ] }, { "name": "CHTF18", "type": "synonym", "evidence": [ { "id": "XP_020942536", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942536" } ] } ], "protein_names": [ { "name": "Chromosome transmission fidelity protein 18 homolog", "type": "recommended", "evidence": [ { "id": "I3LC39", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC39/entry#names_and_taxonomy" } ] }, { "name": "chromosome transmission fidelity protein 18 homolog isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020942536", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942536" } ] } ], "function": [ { "annotation": "Chromosome cohesion factor involved in sister chromatid cohesion and fidelity of chromosome transmission. Component of one of the cell nuclear antigen loader complexes, CTF18-replication factor C (CTF18-RFC), which consists of CTF18, CTF8, DCC1, RFC2, RFC3, RFC4 and RFC5. The CTF18-RFC complex binds to single-stranded and primed DNAs and has weak ATPase activity that is stimulated by the presence of primed DNA, replication protein A (RPA) and by proliferating cell nuclear antigen (PCNA). The CTF18-RFC complex catalyzes the ATP-dependent loading of PCNA onto primed and gapped DNA. Interacts with and stimulates DNA polymerase POLH. During DNA repair synthesis, involved in loading DNA polymerase POLE at the sites of local damage.", "evidence": [ { "database": "UniProtKB", "id": "I3LC39", "url": "https://www.uniprot.org/uniprotkb/I3LC39#function" }, { "database": "UniProtKB", "id": "ARBA00059685", "url": "https://www.uniprot.org/uniprotkb/ARBA00059685#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC39", "url": "https://www.uniprot.org/uniprotkb/I3LC39" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CHTF18", "url": "https://www.uniprot.org/uniprotkb/I3LC39", "locus": { "chromosome": "3", "start_pos": 41000690, "end_pos": 41009589, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008010", "url": "https://www.ensembl.org/id/ENSSSCG00000008010" } ] } } ], "crossref": [ { "id": "I3LC39", "url": "https://alphafold.ebi.ac.uk/entry/I3LC39", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008010", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008010", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00009", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00009", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18140", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18140", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520370", "url": "https://www.ncbi.nlm.nih.gov/gene/100520370", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003593", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003593", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003959", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003959", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047854", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047854", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520370", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LC39", "url": "https://www.orthodb.org/?gene=I3LC39", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46765", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46765", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46765:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46765:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00004", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00004", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-174411", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-174411", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020942536", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942536", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LC39", "url": "https://www.uniprot.org/uniprotkb/I3LC39", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC39-1", "url": "https://www.uniprot.org/uniprotkb/I3LC39-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDYERELYGVEDDDFDSQFAAELEVLAELEGTAALTPSRSLRPAPTMGRPRLTFEEAIAGGDAATHCSPGRPPKGGSGGAKKRQLTADIQGTISLPPTPRIKRSRLEAARRLNFRPDEMEDLLPPDSPTRDIILPPSPEVPAELWGSGPSDTGAEEGCTGASPAARNPVLRRPPVLEDYINVTSTGGDRAFLVLRDDPVGTGVQSPFLDIRWRGHGHGPLDLLGVSFTSLKEKVDSERRQRLLKEAQQLSDTLCSLRAEKVEEEAQPTGAPAEEPAPHQDASEHCLWVDEFAPQRYTELLSDDFTNRCLLKWLKLWDPVVFGQDRPTRKPRPSVEPACGGKEATASSKWKSHEQVLEEMLEAELDPSGRPRQKVALLCGPPGLGKTTLAHVIARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGSGGRPNCLVIDEIDGAPTAAINVLLSVLDRKGPQEAEPGAPAMAAGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKPQALLLHFPPTLPSRLTQRLQEISQQRGMQADPGALAALCEKTDNDIRACINALQFLHGRGRRKLSIQVVQTTRVGLKDQRKGLFSVWQEVFQLPRAQRRRVGQDPTVPTPTLLLGDGHTGSGALTAEVPLTMASQRFYHILHAAASAGEHEKVVQGLFDNFLRLRLRDSSLGTVCVALDWLAFDDLLGRAAHHGQNFQLLRYLPFLPPAFHLLFATSHVPRIAFPSSQQEAQNRMNRTQNLIKTLVSGITPATRSRAAPQALVLDTLCLLLDILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYVYRLEPNVEEVCRFPELPARKPLTYQAKQLIAREIEVEKMRRVEALARARDGPQVDGGPLGGTGGTGVQPPAPCSHKQRLECVLKGAALEEQLERDFFGRVVVRRAAAVSSEDTAPEPDSAERCMGTAVGRSDVWFRFKEGVSNAVRRGVYIRDLL", "length": 983, "header": "tr|I3LC39-1|I3LC39_PIG Isoform 1 of Chromosome transmission fidelity protein 18 homolog OS=Sus scrofa OX=9823 GN=CHTF18 PE=3 SV=3 CANONICAL=I3LC39-1" }, "isoforms": [ { "isoform_ac": "I3LC39-1", "url": "https://www.uniprot.org/uniprotkb/I3LC39/entry#I3LC39-1", "sequence": { "sequence": "MEDYERELYGVEDDDFDSQFAAELEVLAELEGTAALTPSRSLRPAPTMGRPRLTFEEAIAGGDAATHCSPGRPPKGGSGGAKKRQLTADIQGTISLPPTPRIKRSRLEAARRLNFRPDEMEDLLPPDSPTRDIILPPSPEVPAELWGSGPSDTGAEEGCTGASPAARNPVLRRPPVLEDYINVTSTGGDRAFLVLRDDPVGTGVQSPFLDIRWRGHGHGPLDLLGVSFTSLKEKVDSERRQRLLKEAQQLSDTLCSLRAEKVEEEAQPTGAPAEEPAPHQDASEHCLWVDEFAPQRYTELLSDDFTNRCLLKWLKLWDPVVFGQDRPTRKPRPSVEPACGGKEATASSKWKSHEQVLEEMLEAELDPSGRPRQKVALLCGPPGLGKTTLAHVIARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGSGGRPNCLVIDEIDGAPTAAINVLLSVLDRKGPQEAEPGAPAMAAGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKPQALLLHFPPTLPSRLTQRLQEISQQRGMQADPGALAALCEKTDNDIRACINALQFLHGRGRRKLSIQVVQTTRVGLKDQRKGLFSVWQEVFQLPRAQRRRVGQDPTVPTPTLLLGDGHTGSGALTAEVPLTMASQRFYHILHAAASAGEHEKVVQGLFDNFLRLRLRDSSLGTVCVALDWLAFDDLLGRAAHHGQNFQLLRYLPFLPPAFHLLFATSHVPRIAFPSSQQEAQNRMNRTQNLIKTLVSGITPATRSRAAPQALVLDTLCLLLDILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYVYRLEPNVEEVCRFPELPARKPLTYQAKQLIAREIEVEKMRRVEALARARDGPQVDGGPLGGTGGTGVQPPAPCSHKQRLECVLKGAALEEQLERDFFGRVVVRRAAAVSSEDTAPEPDSAERCMGTAVGRSDVWFRFKEGVSNAVRRGVYIRDLL", "length": 983, "header": "tr|I3LC39-1|I3LC39_PIG Isoform 1 of Chromosome transmission fidelity protein 18 homolog OS=Sus scrofa OX=9823 GN=CHTF18 PE=3 SV=3 CANONICAL=I3LC39-1" }, "locus": { "chromosome": "3", "start_pos": 41009532, "end_pos": 41000898, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031631.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031631.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021612.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021612.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 47, "start_aa": "Thr", "end_pos": 47, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr47", "evidence": [ { "id": "GLY_001152", 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR000073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000639", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000639", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625866", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625866", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QNWFSWR", "url": "https://omabrowser.org/oma/group/QNWFSWR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LC51", "url": "https://www.orthodb.org/?gene=I3LC51", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43329", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43329", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005652958", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005652958", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LC51", "url": "https://www.uniprot.org/uniprotkb/I3LC51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC51-1", "url": "https://www.uniprot.org/uniprotkb/I3LC51-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPELVVTALLAPSRLTLKLLRAFMWSLVFSAALVAAAVYGCIALTHVLCRPRRGCCGRPRRTPPACLNDPTLGEHCFLTLKSSGVHLHYVSAGRGNGPLMLFLHGFPENWFSWRYQIREFQSHFHVVAVDLRGYGSSDAPSDMDCYTIDLLMADIQDVILGLGYSKCILVAHDWGALLAWNFSIYYPSLVERMVVVSAAPMSVYQDYSMRHISQFFRSNYVFLFQLPWLPEKLLSMSDFQILKTTLTHRKRGIPHLTPNELEAFLYDFSQPGGLTGPLNYYRNLFRNFPLEPQELATRTLLLWGEKDPYLEQGLVGAISSRFVPGRLEAHILPGVGHWIPQSNAEEMHQYMWTFLQDLLN", "length": 360, "header": 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"database": "Ensembl Peptide", "id": "ENSSSCP00000021624.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021624.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC51", "url": "https://www.uniprot.org/uniprotkb/I3LC51" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625866", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625866", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A4W4-1", "protein_name": "Epoxide hydrolase 3", "gene_name": "Ephx3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCGGSLYPSRASVSSAGPVDPDSTVETQNKGGGLPAPAPPAQSSDHGSVVVPERKDMPEFVVTALLAPSRLSLKLLRALVMILVYLAALVAAFVYSCVALTNVLCHPRRGCCGRQRSAPECLRDPTLGEHCFLTLRSSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSHFHVVAVDLRGYSPSDAPKDVDCYTVDLLLTDIKDIILGLGYSKCILVSHDWGAALAWDFSVYFPSLVDRMIVVSGPPMSVFQEYSTRHIGQLFRSNYIFLFQLPWLPEKLLSLSDFQILKSIFTHHKKGIPRLSPCELEAFLYPFSHPGGLSGPINYYRNVFRNFPLEPKELSKPTLLLWGEKDFSLQQGLVEAIESHFVPGRLESHILPGSGHWIPQSHPEEMHQYMWAFLQDLLG", "length": 415 }, "evidence": [ { "id": "I3LC51", "url": "https://omabrowser.org/oma/group/I3LC51/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BNU8-1", "protein_name": "Epoxide hydrolase 3", "gene_name": "EPHX3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPELVVTALLAPSRLTLKLLRAFMWSLVFSAALVAAAVYGCIALTHVMCRPRRGFLGRPRHTPPVCLSDPTLGEHCFLILRSSGLRLHYVSAGRGKGPLMLFLHGFPENWFSWRYQLREFQSRFHVVAVDLRGYGPSDAPKDVDCYTIDLLMADIQDVILGLGYSKCILVAHDWGALLAWNFSIYYPSLVERMVVVSAAPMSVYQDYSLHHIGQFFRSNYVFLFQLPWLPEKLLSMSDFQILKTTLTHRKRGIPQLTPSELEAFLYDFSQPGGLTGPLNYYRNIFRTFPLEPQELATPTLLLWGEKDPYFEQGLVEAISSRFVPGRLEAHILPGMGHWIPQTNPVEMHQYMWAFLQDLLD", "length": 360 }, "evidence": [ { "id": "I3LC51", "url": "https://omabrowser.org/oma/group/I3LC51/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3V1F8-1", "protein_name": "Epoxide hydrolase 3", "gene_name": "Ephx3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPEFVVTALLAPSRLSLKLLRALVMSLVYLAALVAAFVYSCIALTHVMCRPRRGCCGRQRLSPPECLRDPTLGEHCFLTLRVSVPPVKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQLREFQSHFHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMVVANGPPMSVIQEYSIHHIGQIFRSNYMFLFQLPWLPEKLLSMSDFQILKDTFTHRKNGIPGLTPSELEAFLYHFSQPGCLTGPINYYRNVFRNFPLEPKKLSTPTLLLWGEKDFAFQQGLVEAIGRHFVPGRLESHILPGSGHWIPQSHPQEMHQYMWAFLQDLLG", "length": 367 }, "evidence": [ { "id": "I3LC51", "url": "https://omabrowser.org/oma/group/I3LC51/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H6B9-1", "protein_name": "Epoxide hydrolase 3", "gene_name": "EPHX3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC59-1", "url": "https://www.uniprot.org/uniprotkb/I3LC59-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSQTPPKPHLLSVGSQAPPAPLPRPPAVQKPSSHSWVALCGPPPWGLSCLLALQHVLVLASLLCASHLLLLRSLPPEGLSYPPAQLLASSLFSCGMSTTLQTWMGSRLPLVQAPSLEFLIPALVLTSQKLPLPNRTPGNSSLVLSPCRGAGCQGPELWNTSLREVSGAVVVSGLLQGTLGLLGGPGHLFSHCGPLVLAPSLVVAGLSAHKEVALFCSTHWGLAWLLILLVVVCSQHLGSCPLPPRPWRPAATSSTHTPIAAFRVLSVLIPVACVWTISALLGLSITPLELSAPTEAPWFWLPHPAEWDWPLLTPRALAAGISMALAASISSLGCYALCGRLLHLPSPPPHACSRGLSLEGLGSVLAGLLGSPMGTASIPNVGTMSLFQAGSRRVAHLVGLLCVGLGFSPRLAQLLSTIPLPVLGGVLGVTQAVVLSTGFSSFHMADIDSGRNVFIVGFSIFMALLLPRWFREAPVLLSTGWSPLDVLLRSLLTAPIFLAGLLGFLLENTIPGTQLERGLNQGLPSPFTDQEAQMPQKSREKSAQEYELPFSIQNLCPCLPQPLRCLCPLPKDSGNEEGGSSEPGETADLLPGFGEQRPGSSREELRSQ", "length": 608, "header": "tr|I3LC59-1|I3LC59_PIG Isoform 1 of Solute carrier family 23 member 3 OS=Sus scrofa OX=9823 GN=SLC23A3 PE=3 SV=4 CANONICAL=I3LC59-1" }, "isoforms": [ 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{ "database": "Ensembl Transcript", "id": "ENSSSCT00000031169.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031169.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021632.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021632.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC59", "url": "https://www.uniprot.org/uniprotkb/I3LC59" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LC59", "url": "https://www.uniprot.org/uniprotkb/I3LC59" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "I3LC59", "url": "https://www.uniprot.org/uniprotkb/I3LC59" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "hypoxanthine transport", "id": "GO:0035344", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035344", "evidence": [ { "database": "UniProtKB", "id": "I3LC59", "url": "https://www.uniprot.org/uniprotkb/I3LC59" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 134, "end_pos": 136, "annotation": "n_glycosylation_sequon" }, { "start_pos": 139, "end_pos": 141, "annotation": "n_glycosylation_sequon" }, { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC59-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 608, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC59-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC59" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], 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"categories": [ "Gene Expression" ] }, { "id": "cd21573", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21573", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FQGCIKV", "url": "https://omabrowser.org/oma/group/FQGCIKV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR23235", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23235", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23235:SF71", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23235:SF71", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC62-1", "url": "https://www.uniprot.org/uniprotkb/I3LC62-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGSATGLDVRAPRREAAPPGPPGPPPPVPVVPGPGPGAAAAAAAPHLLAASILADLRGGPGAAAGGASPASSSSAASSPSSGRAPGAAPAAAKSHRCPFPGCAKAYYKSSHLKSHLRTHTGERPFACDWPGCDKKFARSDELARHHRTHTGEKRFPCPLCSKRFTRSDHLTKHARRHPGFRPELLRRPGTRSTSPSDSLPCSLAGSPAPSPVPSPASTVL", "length": 254, "header": "tr|I3LC62-1|I3LC62_PIG Isoform 1 of Krueppel-like factor 14 OS=Sus scrofa OX=9823 GN=KLF16 PE=3 SV=2 CANONICAL=I3LC62-1" }, "isoforms": [ { "isoform_ac": "I3LC62-1", "url": "https://www.uniprot.org/uniprotkb/I3LC62/entry#I3LC62-1", "sequence": { "sequence": "MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGSATGLDVRAPRREAAPPGPPGPPPPVPVVPGPGPGAAAAAAAPHLLAASILADLRGGPGAAAGGASPASSSSAASSPSSGRAPGAAPAAAKSHRCPFPGCAKAYYKSSHLKSHLRTHTGERPFACDWPGCDKKFARSDELARHHRTHTGEKRFPCPLCSKRFTRSDHLTKHARRHPGFRPELLRRPGTRSTSPSDSLPCSLAGSPAPSPVPSPASTVL", "length": 254, "header": "tr|I3LC62-1|I3LC62_PIG Isoform 1 of Krueppel-like factor 14 OS=Sus scrofa OX=9823 GN=KLF16 PE=3 SV=2 CANONICAL=I3LC62-1" }, "locus": { "chromosome": "2", "start_pos": 76688891, "end_pos": 76680219, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029522.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029522.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021635.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021635.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A8E7A9-1", "protein_name": "Krueppel-like factor 14", "gene_name": "klf16", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSFAYSDYLAAECLVSISSGPVLHRPTPVSGAAQAPPQGLPAGEPDGSSEDREVRETLRLDGANMMTVAEILTDLHGKFRPMSAYSESSNSSCGESGYTTLSDSTTPTPTMTPSATPVPGQSQQIWGGGGAPRSPTKRHPCTFDGCDRVYGKSSHLKAHIRTHTGERPFPCTWPECEKKFARSDELARHLRTHTGEKRFLCPLCDKRFMRSDHLIKHARRHPNFQPSMINRKGSAQGSISIQPAAASTAE", "length": 250 }, "evidence": [ { "id": "I3LC62", "url": "https://omabrowser.org/oma/group/I3LC62/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B2GUY9-1", "protein_name": "KLF transcription factor 16", "gene_name": "Klf16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGPAAGLDVRATRREATPPGTPGAPPPPATAPGSGGATAAPHLLAASILADLRGGPGVATAANTAGGTSPVSSSSAASSPSSGRAPGAAKSHRCPFPGCAKAYYKSSHLKSHLRTHTGERPFACDWPGCDKKFARSDELARHHRTHTGEKRFPCPLCTKRFTRSDHLTKHARRHPGFRPELLRRPGARSASPSDSLPCSLAGSPTPSPVPSPAPAGL", "length": 251 }, "evidence": [ { "id": "I3LC62", "url": "https://omabrowser.org/oma/group/I3LC62/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3MWS8-1", "protein_name": "Krueppel-like factor 14", "gene_name": "KLF16", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGPATGLDVRAPRREAAPPGPPGPPPPAPAVLGPGPGAAAAAPHLLAASILADLRGGPSAAPGGASPASSSSAASSPSSGRAPGAAPAAAKSHRCPFPGCAKAYYKSSHLKSHLRTHTGERPFACDWPGCDKKFARSDELARHHRTHTGEKRFPCPLCSKRFTRSDHLTKHARRHPGFRPELLRRQGTRSTSPSDSLPCSLAGSPAPSPVPSPAPVGL", "length": 252 }, "evidence": [ { "id": "I3LC62", "url": "https://omabrowser.org/oma/group/I3LC62/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P58334-1", "protein_name": "Krueppel-like factor 16", "gene_name": "Klf16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGPAAGLDVRATRREATPPGTPGAPPPPATAPGPGGATAAPHLLAASILADLRGGPVVATAASTAGGTSPVSSSSAASSPSSGRAPGAAKSHRCPFHGCAKAYYKSSHLKSHLRTHTGERPFACDWPGCDKKFARSDELARHHRTHTGEKRFPCPLCTKRFTRSDHLTKHARRHPGFRPELLRRPGARSVSPSDSLPCSLAGSPTPSPVPSPAPAGL", "length": 251 }, "evidence": [ { "id": "I3LC62", "url": "https://omabrowser.org/oma/group/I3LC62/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXK1-1", "protein_name": "Krueppel-like factor 16", "gene_name": "KLF16", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPPPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAPGAAPSAAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRHPGFHPDLLRRPGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL", "length": 252 }, "evidence": [ { "id": "I3LC62", "url": "https://omabrowser.org/oma/group/I3LC62/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3LC62", "url": "https://www.uniprot.org/uniprotkb/I3LC62" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC62-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 254, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC62-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC62" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LC62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC62" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 129, "end_pos": 158, "start_aa": "His", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC74-1", "uniprot_ac": "I3LC74", "uniprot_id": "I3LC74_PIG", "mass": { "chemical_mass": 88819.0, "monoisotopic_mass": 88819.0 }, "refseq": {}, "gene_names": [ { "name": "CLCN7", "type": "recommended", "evidence": [ { "id": "I3LC74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ] } ], "protein_names": [ { "name": "Chloride channel protein", "type": "recommended", "evidence": [ { "id": "I3LC74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC74/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Slowly voltage-gated channel mediating the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the lysosome lumen and may be involved in maintaining lysosomal pH. The CLC channel family contains both chloride channels and proton-coupled anion transporters that exchange chloride or another anion for protons. The presence of conserved gating glutamate residues is typical for family members that function as antiporters.", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74#function" }, { "database": "UniProtKB", "id": "ARBA00058384", "url": "https://www.uniprot.org/uniprotkb/ARBA00058384#function" }, { "database": "UniProtKB", "id": "A0A5G2QQT0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQT0#function" }, { "database": "UniProtKB", "id": "A0A5G2QS64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QS64#function" }, { "database": "UniProtKB", "id": "A0A5G2QUV5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUV5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CLCN7", "url": "https://www.uniprot.org/uniprotkb/I3LC74", "locus": { "chromosome": "3", "start_pos": 40420957, "end_pos": 40399639, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008024", "url": "https://www.ensembl.org/id/ENSSSCG00000008024" } ] } } ], "crossref": [ { "id": "I3LC74", "url": "https://alphafold.ebi.ac.uk/entry/I3LC74", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008024", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008024", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03685", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03685", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd04591", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04591", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100626534", "url": "https://www.ncbi.nlm.nih.gov/gene/100626534", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000644", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000644", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001807", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001807", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014743", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014743", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046342", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046342", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051280", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051280", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QUV5", "url": "https://www.orthodb.org/?gene=A0A5G2QUV5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11689", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11689", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11689:SF136", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11689:SF136", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00571", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00571", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00654", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00654", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2672351", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2672351", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "29567", "url": "https://www.rhea-db.org/rhea/29567", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QQT0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQT0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQT0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQT0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QS64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QS64", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QS64-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QS64-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUV5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUV5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUV5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUV5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC74-1", "url": "https://www.uniprot.org/uniprotkb/I3LC74-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MANVSKKVSWSGRDLDDDEAAPLLRRPALSGAPAGEATPLLNGAAPAAARASPHVVLPRLGQMSNVELDDELLDPDVDPPHPFPKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRINHTAFRTVEVKRWVICAMIGILTGLVACFIDVVVEKLAGLKYRLIKDNIDKFTERGGLSFSLLLWATLNSAFVLLGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVAGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPGLINFGRFDTETMVYTIHEIPIFIAMGVVGGILGAVFNALNYWLTMFRIRYIHRPCLQVIEAMLVAAVTATVAFVLIYSSRDCQPLQGSSVSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYITGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSAPVTCLRRREKVGVIVDVLSNSASNHNGFPVVDGADAAQPPRLQGLILRSQLIVLLKHKVFVERSSMGLVRRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKGGLEELSLAQT", "length": 809, "header": "tr|I3LC74-1|I3LC74_PIG Isoform 1 of Chloride channel protein OS=Sus scrofa OX=9823 GN=CLCN7 PE=3 SV=2 CANONICAL=I3LC74-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQT0-1", "url": "https://www.uniprot.org/uniprotkb/I3LC74/entry#A0A5G2QQT0-1", "sequence": { "sequence": "MANVSKKVSWSGRDLDDDEAAPLLRRPALSGAPAGEATPLLNGAAPAAARADVDPPHPFPKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRINHTAFRTVEVKRWVICAMIGILTGLVACFIDVVVEKLAGLKYRLIKDNIDKFTERGGLSFSLLLWATLNSAFVLLGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVAGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPGLINFGRFDTETMVYTIHEIPIFIAMGVVGGILGAVFNALNYWLTMFRIRYIHRPCLQVIEAMLVAAVTATVAFVLIYSSRDCQPLQGSSVSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYITGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSAPVTCLRRREKVGVIVDVLSNSASNHNGFPVVDGADAAQPPRLQGLILRSQLIVLLKHKVFVERSSMGLVRRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKGGLEELSLAQT", "length": 785, "header": "tr|A0A5G2QQT0-1|A0A5G2QQT0_PIG Computationally mapped isoform of Chloride channel protein OS=Sus scrofa OX=9823 GN=CLCN7 PE=3 SV=1 CANONICAL=I3LC74-1" }, "locus": { "chromosome": "3", "start_pos": 40420039, "end_pos": 40399683, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071494.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071494.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064420.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064420.1" } ] } }, { "isoform_ac": "A0A5G2QS64-1", "url": "https://www.uniprot.org/uniprotkb/I3LC74/entry#A0A5G2QS64-1", "sequence": { "sequence": "MSNVELDDELLDPDVDPPHPFPKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRINHTAFRTVEVKRWVICAMIGILTGLVACFIDVVVEKLAGLKYRLIKDNIDKFTERGGLSFSLLLWATLNSAFVLLGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVAGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPGLINFGRFDTETMVYTIHEIPIFIAMGVVGGILGAVFNALNYWLTMFRIRYIHRPCLQVIEAMLVAAVTATVAFVLIYSSRDCQPLQGSSVSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYITGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIELQSVPFLHWEAPVTSHSLTAREVMSAPVTCLRRREKVGVIVDVLSNSASNHNGFPVVDGADAAQPPRLQGLILRSQLIVLLKHKVFVERSSMGLVRRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKGGLEELSLAQT", "length": 739, "header": "tr|A0A5G2QS64-1|A0A5G2QS64_PIG Computationally mapped isoform of Chloride channel protein OS=Sus scrofa OX=9823 GN=CLCN7 PE=3 SV=1 CANONICAL=I3LC74-1" }, "locus": { "chromosome": "3", "start_pos": 40420039, "end_pos": 40406396, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071817.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071817.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061037.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061037.1" } ] } }, { "isoform_ac": "A0A5G2QUV5-1", "url": "https://www.uniprot.org/uniprotkb/I3LC74/entry#A0A5G2QUV5-1", "sequence": { "sequence": "MSNVELDDELLDPDVDPPHPFPKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRINHTAFRTVEVKRWVICAMIGILTGLVACFIDVVVEKLAGLKYRLIKDNIDKFTERGGLSFSLLLWATLNSAFVLLGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVAGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPGLINFGRFDTETMVYTIHEIPIFIAMGVVGGILGAVFNALNYWLTMFRIRYIHRPCLQVIEAMLVAAVTATVAFVLIYSSRDCQPLQGSSVSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYITGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSAPVTCLRRREKVGVIVDVLSNSASNHNGFPVVDGADAAQPPRLQGLILRSQLIVLLKHKVFVERSSMGLVRRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKGGLEELSLAQT", "length": 747, "header": "tr|A0A5G2QUV5-1|A0A5G2QUV5_PIG Computationally mapped isoform of Chloride channel protein OS=Sus scrofa OX=9823 GN=CLCN7 PE=3 SV=1 CANONICAL=I3LC74-1" }, "locus": { "chromosome": "3", "start_pos": 40420039, "end_pos": 40406396, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083670.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083670.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068746.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068746.1" } ] } }, { "isoform_ac": "I3LC74-1", "url": "https://www.uniprot.org/uniprotkb/I3LC74/entry#I3LC74-1", "sequence": { "sequence": "MANVSKKVSWSGRDLDDDEAAPLLRRPALSGAPAGEATPLLNGAAPAAARASPHVVLPRLGQMSNVELDDELLDPDVDPPHPFPKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRINHTAFRTVEVKRWVICAMIGILTGLVACFIDVVVEKLAGLKYRLIKDNIDKFTERGGLSFSLLLWATLNSAFVLLGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVAGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPGLINFGRFDTETMVYTIHEIPIFIAMGVVGGILGAVFNALNYWLTMFRIRYIHRPCLQVIEAMLVAAVTATVAFVLIYSSRDCQPLQGSSVSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYITGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSAPVTCLRRREKVGVIVDVLSNSASNHNGFPVVDGADAAQPPRLQGLILRSQLIVLLKHKVFVERSSMGLVRRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKGGLEELSLAQT", "length": 809, "header": "tr|I3LC74-1|I3LC74_PIG Isoform 1 of Chloride channel protein OS=Sus scrofa OX=9823 GN=CLCN7 PE=3 SV=2 CANONICAL=I3LC74-1" }, "locus": { "chromosome": "3", "start_pos": 40420039, "end_pos": 40399683, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032495.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032495.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021648.3", "url": "https://www.ensembl.org/id/ENSSSCP00000021648.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2672351", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2672351", "resource": "Reactome", "description": "Stimuli-sensing channels" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "pmid": "" }, { "name": "chloride channel activity", "id": "GO:0005254", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005254", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "pmid": "" }, { "name": "chloride:proton antiporter activity", "id": "GO:0062158", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0062158", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "lysosomal membrane", "id": "GO:0005765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005765", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "pmid": "" }, { "name": "chloride channel complex", "id": "GO:0034707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034707", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "chloride transmembrane transport", "id": "GO:1902476", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902476", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "pmid": "" }, { "name": "transepithelial chloride transport", "id": "GO:0030321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030321", "evidence": [ { "database": "UniProtKB", "id": "I3LC74", "url": "https://www.uniprot.org/uniprotkb/I3LC74" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3, "end_pos": 5, "annotation": "n_glycosylation_sequon" }, { "start_pos": 580, "end_pos": 582, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "29567", "name": "", "equation": "2 chloride(in) + H(+)(out) = 2 chloride(out) + H(+)(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "29567", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/29567" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC74-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 809, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC74-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC74" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LC74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC74" }, { "id": "PS51371", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51371" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CBS", "eco_id": "ECO_0000259", "start_pos": 745, "end_pos": 803, "start_aa": "Met", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 119, "end_pos": 121 }, { "start_pos": 3, "end_pos": 5 }, { "start_pos": 580, "end_pos": 582 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC86-1", "uniprot_ac": "I3LC86", "uniprot_id": "I3LC86_PIG", "mass": { "chemical_mass": 22303.0, "monoisotopic_mass": 22303.0 }, "refseq": {}, "gene_names": [ { "name": "KRTAP27-1", "type": "recommended", "evidence": [ { "id": "I3LC86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC86" } ] } ], "protein_names": [ { "name": "Keratin-associated protein", "type": "recommended", "evidence": [ { "id": "I3LC86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC86/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin-associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. The matrix proteins include the high-sulfur and high-glycine-tyrosine keratins.", "evidence": [ { "database": "UniProtKB", "id": "I3LC86", "url": "https://www.uniprot.org/uniprotkb/I3LC86#function" }, { "database": "UniProtKB", "id": "RU369044", "url": "https://www.uniprot.org/uniprotkb/RU369044#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC86", "url": "https://www.uniprot.org/uniprotkb/I3LC86" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KRTAP27-1", "url": "https://www.uniprot.org/uniprotkb/I3LC86", "locus": { "chromosome": "13", "start_pos": 193730803, "end_pos": 193731423, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029297", "url": "https://www.ensembl.org/id/ENSSSCG00000029297" } ] } } ], "crossref": [ { "id": "I3LC86", "url": "https://alphafold.ebi.ac.uk/entry/I3LC86", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000029297", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029297", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR007659", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007659", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007951", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007951", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "SFHNAPP", "url": "https://omabrowser.org/oma/group/SFHNAPP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LC86", "url": "https://www.orthodb.org/?gene=I3LC86", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23260", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23260", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23260:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23260:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05287", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05287", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LC86", "url": "https://www.uniprot.org/uniprotkb/I3LC86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC86-1", "url": "https://www.uniprot.org/uniprotkb/I3LC86-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTQSPSHSLKSFYNVPTLSAIVHESNALNFEDGFFLPSSFHGRTWLLDNFQETCTENTSCKVPRGEQELGTGDSCVQSAYLRRVVQETCPDFKPCEKTACQSGRPLAALECVSQPCQSGSSQQVGFAVQTCQPLSNMAKCCPPKTYVSKGCQTLECDSSQCQSRTSESHSCSPLGYVTPEPELLGSSSNTYEPICCVTGGLQLPSK", "length": 206, "header": "tr|I3LC86-1|I3LC86_PIG Isoform 1 of Keratin-associated protein OS=Sus scrofa OX=9823 GN=KRTAP27-1 PE=3 SV=2 CANONICAL=I3LC86-1" }, "isoforms": [ { "isoform_ac": "I3LC86-1", "url": "https://www.uniprot.org/uniprotkb/I3LC86/entry#I3LC86-1", "sequence": { "sequence": "MTQSPSHSLKSFYNVPTLSAIVHESNALNFEDGFFLPSSFHGRTWLLDNFQETCTENTSCKVPRGEQELGTGDSCVQSAYLRRVVQETCPDFKPCEKTACQSGRPLAALECVSQPCQSGSSQQVGFAVQTCQPLSNMAKCCPPKTYVSKGCQTLECDSSQCQSRTSESHSCSPLGYVTPEPELLGSSSNTYEPICCVTGGLQLPSK", "length": 206, "header": "tr|I3LC86-1|I3LC86_PIG Isoform 1 of Keratin-associated protein OS=Sus scrofa OX=9823 GN=KRTAP27-1 PE=3 SV=2 CANONICAL=I3LC86-1" }, "locus": { "chromosome": "13", "start_pos": 193731423, "end_pos": 193730806, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022683.2", "url": "https://www.ensembl.org/id/ENSSSCT00000022683.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021660.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021660.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC86", "url": "https://www.uniprot.org/uniprotkb/I3LC86" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E9PX37-1", "protein_name": "Keratin-associated protein", "gene_name": "Krtap27-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLHSHCQSFRSLGKAPSLSSITHNSNPKSFEDGIVLPSSCHRRTWLLDNFQETYSETSTCQPANCGQNQCKVDPCVQSSQNSRAEQTICSNSKTCERTREISPAVPESASQTCQSRNYKQVGFVAQSYQPASYMAKCCPLKSTAFESCQTLEFESSPCCSQVSESRSCNSSSSIVSGLHLVESSNTYEPTCCVTGGSQVPSK", "length": 202 }, "evidence": [ { "id": "I3LC86", "url": "https://omabrowser.org/oma/group/I3LC86/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3LI81-1", "protein_name": "Keratin-associated protein 27-1", "gene_name": "KRTAP27-1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPHSHCHSLRSFHNAPPLSAITHGTNPITFEDRLCLPSSFHSRTCFLDNFQETCNETTSCQMTNCEQDLFTDDSCVQSNCFPGVVQTTYSNSRPCERTACQSESSSAGLACVSQPCQSESTQQMGFVAQSCQPASLKGNSCPPKTSKSKNFETLERASSQCQCQSQNPESSSCRPLVNVAPEPQLLESSPGVEPTCCVTGGSQLPSK", "length": 207 }, "evidence": [ { "id": "I3LC86", "url": "https://omabrowser.org/oma/group/I3LC86/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LC86", "url": "https://www.uniprot.org/uniprotkb/I3LC86" } ], "pmid": "" }, { "name": "keratin filament", "id": "GO:0045095", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045095", "evidence": [ { "database": "UniProtKB", "id": "I3LC86", "url": "https://www.uniprot.org/uniprotkb/I3LC86" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural molecule activity", "id": "GO:0005198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005198", "evidence": [ { "database": "UniProtKB", "id": "I3LC86", "url": "https://www.uniprot.org/uniprotkb/I3LC86" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 57, "end_pos": 59, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LC86-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 206, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LC86-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LC86" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 57, "end_pos": 59 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LC88-1", "uniprot_ac": "I3LC88", "uniprot_id": "I3LC88_PIG", "mass": { "chemical_mass": 517523.0, "monoisotopic_mass": 517523.0 }, "refseq": {}, "gene_names": [ { "name": "LRP1B", "type": "recommended", "evidence": [ { "id": "I3LC88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC88" } ] } ], "protein_names": [ { "name": "Low-density lipoprotein receptor-related protein 1B", "type": "recommended", "evidence": [ { "id": "I3LC88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC88/entry#names_and_taxonomy" } ] }, { "name": "Low-density lipoprotein receptor-related protein-deleted in tumor", "type": "synonym", "evidence": [ { "id": "I3LC88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LC88/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Potential cell surface proteins that bind and internalize ligands in the process of receptor-mediated endocytosis.", "evidence": [ { "database": "UniProtKB", "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88#function" }, { "database": "UniProtKB", "id": "ARBA00059602", "url": "https://www.uniprot.org/uniprotkb/ARBA00059602#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LRP1B", "url": "https://www.uniprot.org/uniprotkb/I3LC88", "locus": { "chromosome": "15", "start_pos": 11499530, "end_pos": 9613238, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023746", "url": "https://www.ensembl.org/id/ENSSSCG00000023746" } ] } } ], "crossref": [ { "id": "ENSSSCG00000023746", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023746", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00112", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00112", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000033", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000033", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009030", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009030", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011042", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011042", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023415", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023415", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026823", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026823", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051221", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051221", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR22722", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22722", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22722:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22722:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00008", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00008", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00057", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00057", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00058", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00058", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07645", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12662", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12662", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14670", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14670", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LC88-1", "url": "https://www.uniprot.org/uniprotkb/I3LC88-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTLVGSGLGAAAAAAGPRVQPSSLRRRLPPGVTTMSEFLLALLTLSGLLPVTKVLTAGAERDQQSCDPGEFLCHDHVTCVSQSWLCDGDPDCPDDSDESLDTCPEEVETKCPLNHIACLGDNKCVHLSQMCNGVLDCSDGYDEGVHCRELLPSCQHLNCQYKCAIVRNSTICYCEDGFEIKEDKRSCKDQDECAIYGTCSQTCINTYGSYACSCVEGYLMQPDNRSCRAKNEPTDRPPMLLIANSETIEVFYLNGSKMATLSSVNGNEIYTLDFIYNEDMICWIESRESSNQLKCIQITKTGRLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCDYNGSVCVTLIDLELQNPKAIAVDPIAGKLFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKWVYWVDLYLDYVEVVDYQGKNRHTIIQGRQVKHLYGITVFEDYLYATNSDNFNIIRINRFNGTDNHSFIKMENARGIRIYQKRTQPTVRSHACEVDPYGMGGCSHICLLGSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPINGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTRTLYWCDAYYDHIEKVFLNGTHRKIVYSGKELNHPFGLSHHGNYVFWTDYMNGSIFQLDLITNEVTLLRRERPPLFGLQIYDPRKQQGDNMCRINNGGCSTLCLAIPGGRVCACADNQLLDENGTTCTFNPGEVLPHICKAGEFRCKNRHCIQAQWKCDGDDDCLDGSDEDPVSCFNHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQADQFSCGNGRCIPRAWLCDREDDCGDQTDETASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVGCVHSCFENQFRCSSGRCIPGHWACDGDNDCGDFSDEINCTREEIRSPAGCNEHEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKGCSGTLRLCDHKTKFSCRSTGRCINKAWVCDGDIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDEGDLCDECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLSRDNKTCEIVDYCSSHLKCSQVCEQHKHTVKCSCYEGWKLNVDGETCTSVDPFEAFIIFSIRHEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSENGGVSAIEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDPRYGILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARSDAIYSALYDGTDMIEIIRGHEYLSHPFAVSLYGSDVYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPSRQPQAPNPCAANDGRGPCSHMCLINHNRSAACACPHLMKLSSNKKTCYEMKKFLLYARRSEIRGVDIDNPYFNFITAFTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRCNLDGSNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLRNKTSGVVHMKVYDKEAQQGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIESFLMYSVHEGIRGIPLEPTDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRVKRDQTWKEDIITNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGYLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKNDATETITMRTGLGVNLKEVKIFNRVREKGTNVCAKDNGGCQQLCLYRGNSWRTCACAHGYLAEDGVTCLRHEGYLLYSGRTILKSIHLSDETNLNSPIRPYENPRYFKNVIALAFDYNQRRKGTNRIFYSDAHFGNIQLIKDNWEDRQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDDHPHVLALDECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKTGPGTFLSLAVYDNYIFWSDWGRRAILRSSKYTGGDTKILRSDIPHQPMGIIAVANDTNSCELSPCAILNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYSEFECGNGECIDYQLTCDGFPHCKDKSDEKLLYCENRSCRRGFKPCHNRRCIPHSKLCDGENDCGDNSDELDCKVSTCDSVEFRCADGSCIPRSARCNQNIDCADASDEKNCNNTDCTYFYKLGVKSAGFIRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPTGRCILNTWICDGQKDCEDGLDESYCDSSCSWNQFACSAQKCISKHWVCDGEDDCGDGLDESDSTCGAITCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESLQCGYQQCSAEEFSCADGRCLLNTQWQCDGDFDCPDHSDEAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGSLCDNKDDCGDGSDERNCHINECLSKRISGCSQDCQDLPVSYKCKCWPGFHLKDDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILADHHEIRKISTDGSNYTLLKQGLNNVIGIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDIKVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSIVIETKISRPMALTIDYVNHRLYWADENHIEFSNMDGSHRHKVPNQDIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTCLSNCTASQFRCKTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTRNQKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCKPQTCTLKDFLCANGDCVSSRFWCDGDFDCADGSDEDQFQCSNGQCISAKWKCDGHEDCKYGEDEKNCEPASPTCSSSEYICSSGGCISASLKCNGEYDCADGSDEMDCVTECKEDQFRCRNKAHCIPIRWLCDGVHDCVDGSDEENCDRGGNICRADEFLCNNSLCKLQFWVCNGEDDCGDNSDEAPDMCVKFLCPPTRPHRCRNNRICLQPEQICNGIDDCGDNSDEDPCGGKLTYKARPCKKDEFACSNKCIPMDHQCDQLDDCGDGSDEQGCRITPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKPGFQRNMKNRQCEDLNECLLFGTCSHQCINVEGSYKCVCDQNFQERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYKRIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPRRGMMYWTVVGDRSHIEEAAMDGTLRRILVQKNLQRPTGLAVDHFSQRIYWADLELSVIGSVLYDGSDSVVSVSSKQGLLHPHRIDVFEDYIYGAGPKNGVFRVQKFGHGSVEYLSLDVDKTKGVLISHRYKQLDLPNPCLDLACEFLCLLNPSGATCVCPEGKYLINGTCNDDSLSDDSCKLTCENGGRCILNEKGDLRCHCWPSYSGERCEVNHCSHYCQNGGTCVPSALGRPTCSCALGFTGPNCGKTVCEDFCQNGGTCSVTAGNQPYCHCQPEHTGDRCQYYVCHHYCVNSESCSIGDDGSVECICPTRYEGPKCEVDKCVRCHGGHCIINKDSEDISCNCTNGKIASSCQLCDGYCYNGGTCRLDPETNVPVCLCSTNWSGTQCERPAPKSSKSDHISTRSIAIIVPLVLLVTLITTLVIGLVLCKRKRRTKTIRRQPIINGGINVEIGNPSYNMYEVDHDHSDGGLLDPGFMVDPTKARYIGGGSSAFKLPHTAPPIYLNSDLKGPLTAGPTNYSNPVYAKLYMDGQNCRNSLGSVDERKELLPKKIEIGIRETVA", "length": 4620, "header": "tr|I3LC88-1|I3LC88_PIG Isoform 1 of Low-density lipoprotein receptor-related protein 1B OS=Sus scrofa OX=9823 GN=LRP1B PE=3 SV=4 CANONICAL=I3LC88-1" }, "isoforms": [ { "isoform_ac": "I3LC88-1", "url": "https://www.uniprot.org/uniprotkb/I3LC88/entry#I3LC88-1", "sequence": { "sequence": "MTLVGSGLGAAAAAAGPRVQPSSLRRRLPPGVTTMSEFLLALLTLSGLLPVTKVLTAGAERDQQSCDPGEFLCHDHVTCVSQSWLCDGDPDCPDDSDESLDTCPEEVETKCPLNHIACLGDNKCVHLSQMCNGVLDCSDGYDEGVHCRELLPSCQHLNCQYKCAIVRNSTICYCEDGFEIKEDKRSCKDQDECAIYGTCSQTCINTYGSYACSCVEGYLMQPDNRSCRAKNEPTDRPPMLLIANSETIEVFYLNGSKMATLSSVNGNEIYTLDFIYNEDMICWIESRESSNQLKCIQITKTGRLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCDYNGSVCVTLIDLELQNPKAIAVDPIAGKLFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKWVYWVDLYLDYVEVVDYQGKNRHTIIQGRQVKHLYGITVFEDYLYATNSDNFNIIRINRFNGTDNHSFIKMENARGIRIYQKRTQPTVRSHACEVDPYGMGGCSHICLLGSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPINGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTRTLYWCDAYYDHIEKVFLNGTHRKIVYSGKELNHPFGLSHHGNYVFWTDYMNGSIFQLDLITNEVTLLRRERPPLFGLQIYDPRKQQGDNMCRINNGGCSTLCLAIPGGRVCACADNQLLDENGTTCTFNPGEVLPHICKAGEFRCKNRHCIQAQWKCDGDDDCLDGSDEDPVSCFNHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQADQFSCGNGRCIPRAWLCDREDDCGDQTDETASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVGCVHSCFENQFRCSSGRCIPGHWACDGDNDCGDFSDEINCTREEIRSPAGCNEHEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKGCSGTLRLCDHKTKFSCRSTGRCINKAWVCDGDIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDEGDLCDECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLSRDNKTCEIVDYCSSHLKCSQVCEQHKHTVKCSCYEGWKLNVDGETCTSVDPFEAFIIFSIRHEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSENGGVSAIEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDPRYGILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARSDAIYSALYDGTDMIEIIRGHEYLSHPFAVSLYGSDVYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPSRQPQAPNPCAANDGRGPCSHMCLINHNRSAACACPHLMKLSSNKKTCYEMKKFLLYARRSEIRGVDIDNPYFNFITAFTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRCNLDGSNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLRNKTSGVVHMKVYDKEAQQGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIESFLMYSVHEGIRGIPLEPTDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRVKRDQTWKEDIITNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGYLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKNDATETITMRTGLGVNLKEVKIFNRVREKGTNVCAKDNGGCQQLCLYRGNSWRTCACAHGYLAEDGVTCLRHEGYLLYSGRTILKSIHLSDETNLNSPIRPYENPRYFKNVIALAFDYNQRRKGTNRIFYSDAHFGNIQLIKDNWEDRQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDDHPHVLALDECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKTGPGTFLSLAVYDNYIFWSDWGRRAILRSSKYTGGDTKILRSDIPHQPMGIIAVANDTNSCELSPCAILNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYSEFECGNGECIDYQLTCDGFPHCKDKSDEKLLYCENRSCRRGFKPCHNRRCIPHSKLCDGENDCGDNSDELDCKVSTCDSVEFRCADGSCIPRSARCNQNIDCADASDEKNCNNTDCTYFYKLGVKSAGFIRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPTGRCILNTWICDGQKDCEDGLDESYCDSSCSWNQFACSAQKCISKHWVCDGEDDCGDGLDESDSTCGAITCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESLQCGYQQCSAEEFSCADGRCLLNTQWQCDGDFDCPDHSDEAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGSLCDNKDDCGDGSDERNCHINECLSKRISGCSQDCQDLPVSYKCKCWPGFHLKDDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILADHHEIRKISTDGSNYTLLKQGLNNVIGIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDIKVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSIVIETKISRPMALTIDYVNHRLYWADENHIEFSNMDGSHRHKVPNQDIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTCLSNCTASQFRCKTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTRNQKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCKPQTCTLKDFLCANGDCVSSRFWCDGDFDCADGSDEDQFQCSNGQCISAKWKCDGHEDCKYGEDEKNCEPASPTCSSSEYICSSGGCISASLKCNGEYDCADGSDEMDCVTECKEDQFRCRNKAHCIPIRWLCDGVHDCVDGSDEENCDRGGNICRADEFLCNNSLCKLQFWVCNGEDDCGDNSDEAPDMCVKFLCPPTRPHRCRNNRICLQPEQICNGIDDCGDNSDEDPCGGKLTYKARPCKKDEFACSNKCIPMDHQCDQLDDCGDGSDEQGCRITPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKPGFQRNMKNRQCEDLNECLLFGTCSHQCINVEGSYKCVCDQNFQERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYKRIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPRRGMMYWTVVGDRSHIEEAAMDGTLRRILVQKNLQRPTGLAVDHFSQRIYWADLELSVIGSVLYDGSDSVVSVSSKQGLLHPHRIDVFEDYIYGAGPKNGVFRVQKFGHGSVEYLSLDVDKTKGVLISHRYKQLDLPNPCLDLACEFLCLLNPSGATCVCPEGKYLINGTCNDDSLSDDSCKLTCENGGRCILNEKGDLRCHCWPSYSGERCEVNHCSHYCQNGGTCVPSALGRPTCSCALGFTGPNCGKTVCEDFCQNGGTCSVTAGNQPYCHCQPEHTGDRCQYYVCHHYCVNSESCSIGDDGSVECICPTRYEGPKCEVDKCVRCHGGHCIINKDSEDISCNCTNGKIASSCQLCDGYCYNGGTCRLDPETNVPVCLCSTNWSGTQCERPAPKSSKSDHISTRSIAIIVPLVLLVTLITTLVIGLVLCKRKRRTKTIRRQPIINGGINVEIGNPSYNMYEVDHDHSDGGLLDPGFMVDPTKARYIGGGSSAFKLPHTAPPIYLNSDLKGPLTAGPTNYSNPVYAKLYMDGQNCRNSLGSVDERKELLPKKIEIGIRETVA", "length": 4620, "header": "tr|I3LC88-1|I3LC88_PIG Isoform 1 of Low-density lipoprotein receptor-related protein 1B OS=Sus scrofa OX=9823 GN=LRP1B PE=3 SV=4 CANONICAL=I3LC88-1" }, "locus": { "chromosome": "15", "start_pos": 11498526, "end_pos": 9613437, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022273.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022273.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021662.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021662.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88" } ], "pmid": "" }, { "name": "receptor complex", "id": "GO:0043235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043235", "evidence": [ { "database": "UniProtKB", "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "receptor-mediated endocytosis", "id": "GO:0006898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006898", "evidence": [ { "database": "UniProtKB", "id": "I3LC88", "url": "https://www.uniprot.org/uniprotkb/I3LC88" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1072, "end_pos": 1074, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1176, "end_pos": 1178, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1240, "end_pos": 1242, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1329, 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"https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3LCA7", "url": "https://www.uniprot.org/uniprotkb/I3LCA7" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LCA7", "url": "https://www.uniprot.org/uniprotkb/I3LCA7" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "I3LCA7", "url": "https://www.uniprot.org/uniprotkb/I3LCA7" } ], "pmid": "" }, { "name": "phagocytic vesicle membrane", "id": "GO:0030670", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030670", "evidence": [ { "database": "UniProtKB", "id": "I3LCA7", "url": "https://www.uniprot.org/uniprotkb/I3LCA7" } ], "pmid": "" }, { "name": "endocytic vesicle", "id": "GO:0030139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030139", "evidence": [ { "database": "UniProtKB", "id": "I3LCA7", "url": "https://www.uniprot.org/uniprotkb/I3LCA7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 50, "end_pos": 52, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19669", "name": "", "equation": "GTP + H2O = GDP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19669", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19669" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 50, "end_pos": 52 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LCB8-1", "uniprot_ac": "I3LCB8", "uniprot_id": "I3LCB8_PIG", "mass": { "chemical_mass": 38284.0, "monoisotopic_mass": 38284.0 }, "refseq": { "ac": "XP_020957869", "name": "cell growth regulator with RING finger domain protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957869" }, "gene_names": [ { "name": "CGRRF1", "type": "recommended", "evidence": [ { "id": "I3LCB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCB8" } ] }, { "name": "CGRRF1", "type": "synonym", "evidence": [ { "id": "XP_020957869", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957869" } ] } ], "protein_names": [ { "name": "Cell growth regulator with RING finger domain protein 1", "type": "recommended", "evidence": [ { "id": "I3LCB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCB8/entry#names_and_taxonomy" } ] }, { "name": "Cell growth regulatory gene 19 protein", "type": "synonym", "evidence": [ { "id": "I3LCB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCB8/entry#names_and_taxonomy" } ] }, { "name": "cell growth regulator with RING finger domain protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020957869", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957869" } ] } ], "function": [ { "annotation": "Able to inhibit growth in several cell lines.", "evidence": [ { "database": "UniProtKB", "id": "I3LCB8", "url": "https://www.uniprot.org/uniprotkb/I3LCB8#function" }, { "database": "UniProtKB", "id": "ARBA00054111", "url": "https://www.uniprot.org/uniprotkb/ARBA00054111#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCB8", "url": "https://www.uniprot.org/uniprotkb/I3LCB8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CGRRF1", "url": "https://www.uniprot.org/uniprotkb/I3LCB8", "locus": { "chromosome": "1", "start_pos": 183903897, "end_pos": 183876919, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021451", "url": "https://www.ensembl.org/id/ENSSSCG00000021451" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021451", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021451", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16787", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16787", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625719", "url": "https://www.ncbi.nlm.nih.gov/gene/100625719", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625719", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625719", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IYCQLPK", "url": "https://omabrowser.org/oma/group/IYCQLPK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LCB8", "url": "https://www.orthodb.org/?gene=I3LCB8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15379", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15379", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15379:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15379:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13920", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13920", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020957869", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957869", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LCB8", "url": "https://www.uniprot.org/uniprotkb/I3LCB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCB8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCB8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFNTRVFKKQMRQVKNPFGLEITNPSSASITTGITLRTDCLEDSLLTCYWGCSVQRLYEALQKHFYCFRISTPRALDDALYSEYLYQEQYFIKKDSKEEIYCQLPRENKIEDFGMVPRSRYPLVALLTLADEDDREIYDIISMVSVIHIPDKTYKLSCRILYQYLLLAQGQFHDLKQLFMSANNNSTPSSNSSPEGKNTDQSLMEKAGLSESEVEPLEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALCSQKEQDKDKLKSL", "length": 332, "header": "tr|I3LCB8-1|I3LCB8_PIG Isoform 1 of Cell growth regulator with RING finger domain protein 1 OS=Sus scrofa OX=9823 GN=CGRRF1 PE=4 SV=2 CANONICAL=I3LCB8-1" }, "isoforms": [ { "isoform_ac": "I3LCB8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCB8/entry#I3LCB8-1", "sequence": { "sequence": "MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFNTRVFKKQMRQVKNPFGLEITNPSSASITTGITLRTDCLEDSLLTCYWGCSVQRLYEALQKHFYCFRISTPRALDDALYSEYLYQEQYFIKKDSKEEIYCQLPRENKIEDFGMVPRSRYPLVALLTLADEDDREIYDIISMVSVIHIPDKTYKLSCRILYQYLLLAQGQFHDLKQLFMSANNNSTPSSNSSPEGKNTDQSLMEKAGLSESEVEPLEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALCSQKEQDKDKLKSL", "length": 332, "header": "tr|I3LCB8-1|I3LCB8_PIG Isoform 1 of Cell growth regulator with RING finger domain protein 1 OS=Sus scrofa OX=9823 GN=CGRRF1 PE=4 SV=2 CANONICAL=I3LCB8-1" }, "locus": { "chromosome": "1", "start_pos": 183902674, "end_pos": 183876939, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027967.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027967.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021693.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021693.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 237, "start_aa": "Thr", "end_pos": 237, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr237", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCB8", "url": "https://www.uniprot.org/uniprotkb/I3LCB8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625719", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625719", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MGK4-1", "protein_name": "Cell growth regulator with RING finger domain protein 1", "gene_name": "Cgrrf1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEEIQFSTRAFKKQMRQVKNPFGLEITNSSSASLAAGVTLTTDCLEDSRLTCFWGCSVQRLYEALQKHRYCFRISTPQALEEALYSDYLHREQYFIKKHSKEEIYCQLPRDTEIEDFGPVPRSRYPLVALLTLADEDDREIYDIISMVSVIHIPDKTYKLPCRILYQYLLLAQGQFYDLKQLFMSANSSPSPSSKPSPADRNAEQSLLEKAGLAGSEVEPVEESSKDCVVCQNGGVNWVLLPCRHACLCDSCVCYFKQCPMCRQFVQESFALCGQKEPDKDMLETS", "length": 332 }, "evidence": [ { "id": "I3LCB8", "url": "https://omabrowser.org/oma/group/I3LCB8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0Z858-1", "protein_name": "Cell growth regulator with RING finger domain protein 1", "gene_name": "CGRRF1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAVFLVTLYEYSPLFYITVVFVCFLVTSGLVLGWFGLGVPVILRNSEGTESSTRVLKKRMRQVKNPFGLEISHPDTASVTRGITLIPDCLEDCVLTCYWGCNVQKLHEALQKHVYCFRINTPQALEDALYDEYLYRQQYFIKKNDKEEKYCQLPEDAQVVDFGPVPRLCYPLIALLTLADEEDREIYDIISMVSVIHVPDESYRLSCRILYQYLLLAQGQYHDLKQLFMSANSTTPPSCGTSPDERSTDRSLLEKAGLAEDEPELHEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCIKYFQQCPMCRQFVQESFPLCSKKEQDEDESTQILQDVHPGRVF", "length": 342 }, "evidence": [ { "id": "I3LCB8", "url": "https://omabrowser.org/oma/group/I3LCB8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BIW8-1", "protein_name": "Cell growth regulator with RING finger domain protein 1", "gene_name": "CGRRF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFNTRVFKKQMRQVKNPFGLEITNPSSASITTGITLTTDCLEDSLLTCYWGCSVQKLYEALQKHFYCFRISTPRALEDALYSEYLYQEQYFIKKDSKEEIYCQLPRDTKIEDFGTVPRSRYPLVALLTLADKDDREIYDIISMVSVIHIPDKTYKLSCRILYQYLLLAQGQFHDLKQLFMSANNNSTPSSNSSPEEKNTDRSLLEKAGLSESEVEPPEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALCSQKEQDKDKLKSL", "length": 332 }, "evidence": [ { "id": "I3LCB8", "url": "https://omabrowser.org/oma/group/I3LCB8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P97587-1", "protein_name": "Cell growth regulator with RING finger domain protein 1", "gene_name": "Cgrrf1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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{ "id": "I3LCH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ] }, { "name": "GALNT5", "type": "synonym", "evidence": [ { "id": "XP_020930709", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930709" } ] } ], "protein_names": [ { "name": "Polypeptide N-acetylgalactosaminyltransferase", "type": "recommended", "evidence": [ { "id": "I3LCH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCH7/entry#names_and_taxonomy" } ] }, { "name": "2.4.1.-", "type": "synonym", "evidence": [ { "id": "I3LCH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCH7/entry#names_and_taxonomy" } ] }, { "name": "Protein-UDP acetylgalactosaminyltransferase", "type": "synonym", "evidence": [ { "id": "I3LCH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCH7/entry#names_and_taxonomy" } ] }, { "name": "polypeptide N-acetylgalactosaminyltransferase 5", "type": "synonym", "evidence": [ { "id": "XP_020930709", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930709" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GALNT5", "url": "https://www.uniprot.org/uniprotkb/I3LCH7", "locus": { "chromosome": "15", "start_pos": 64282664, "end_pos": 64241738, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026146", "url": "https://www.ensembl.org/id/ENSSSCG00000026146" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026146", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026146", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02510", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02510", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd23436", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd23436", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100627600", "url": "https://www.ncbi.nlm.nih.gov/gene/100627600", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000772", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000772", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001173", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001173", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029044", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029044", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627600", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627600", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HGMHHVL", "url": "https://omabrowser.org/oma/group/HGMHHVL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LCH7", "url": "https://www.orthodb.org/?gene=I3LCH7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11675", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11675", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11675:SF130", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11675:SF130", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00535", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00535", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00652", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00652", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-913709", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913709", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020930709", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930709", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCH7-1", "url": "https://www.uniprot.org/uniprotkb/I3LCH7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNKIRKFFRGSGRVLAFIFVASVIWLLFDMAALRLSFSEINSRVLKEDIVRRERIGFRVQPDQVKILYSSVKDMKPPLKGHRKGIWGKENFRKTEESKLKVEDNLDQTQKERKMQNAPGRGKVAPLWRPAYLQTLPVTFIKRKTEARDISPKASSHHVTPKQTTAQGAQKVPLITTRRIPLAKISIHQGPVSINQEARKNHSLSSDTSKQTAERNMNATISLNIDRSKQQSQAVANERTHPASPPVPKPREAIALNKTETQSKELSANKHKANKNFPFSKFFANSNLLKKQSINETQLRGLPKDGGAKVADGRKLHLPESHIVIITKEEELKTETKEVPKTKTKTLFPIGPAESQGKHIAKNRSEASFSSLAPQRAIVSQTSQALPGGLEPSRINSTTKAEPTQLNRSHITAHSPKDGGMHRVLSIDLTLSPRDPKAPGQFGRPVVVPQGKEKEVEKRWKEGNFNVYLSDLIPVDRAIEDTRPAGCADQLVHNKLPTTSVIMCFVDEVWSTLLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKDNLDKYMSQFPKVRILRLKERHGLIRARLAGAQIATGDVLTFLDSHVECNVGWLEPLLERVYLSRKKVACPVIEVINDKDMSYMTVDNFQRGIFVWPMNFGWRTIPPDIVAKNKIKETDIIRCPVMAGGLFSIDKTYFFELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCKSFKWYLENVFPDLKAPIVRASGVLINVALGKCISIKNTTAILEDCDGSSKLQQFNYTWLRLIKQGEWCLAPVPDNGALTLHPCDNRNKGLKWLHKSTSVFHPELVNHIVFGNYHQLLCLEGNMSLKTLKVAACDPVKPYQKWKFEKYYED", "length": 940, "header": "tr|I3LCH7-1|I3LCH7_PIG Isoform 1 of Polypeptide N-acetylgalactosaminyltransferase OS=Sus scrofa OX=9823 GN=GALNT5 PE=3 SV=2 CANONICAL=I3LCH7-1" }, "isoforms": [ { "isoform_ac": "I3LCH7-1", "url": "https://www.uniprot.org/uniprotkb/I3LCH7/entry#I3LCH7-1", "sequence": { "sequence": "MNKIRKFFRGSGRVLAFIFVASVIWLLFDMAALRLSFSEINSRVLKEDIVRRERIGFRVQPDQVKILYSSVKDMKPPLKGHRKGIWGKENFRKTEESKLKVEDNLDQTQKERKMQNAPGRGKVAPLWRPAYLQTLPVTFIKRKTEARDISPKASSHHVTPKQTTAQGAQKVPLITTRRIPLAKISIHQGPVSINQEARKNHSLSSDTSKQTAERNMNATISLNIDRSKQQSQAVANERTHPASPPVPKPREAIALNKTETQSKELSANKHKANKNFPFSKFFANSNLLKKQSINETQLRGLPKDGGAKVADGRKLHLPESHIVIITKEEELKTETKEVPKTKTKTLFPIGPAESQGKHIAKNRSEASFSSLAPQRAIVSQTSQALPGGLEPSRINSTTKAEPTQLNRSHITAHSPKDGGMHRVLSIDLTLSPRDPKAPGQFGRPVVVPQGKEKEVEKRWKEGNFNVYLSDLIPVDRAIEDTRPAGCADQLVHNKLPTTSVIMCFVDEVWSTLLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKDNLDKYMSQFPKVRILRLKERHGLIRARLAGAQIATGDVLTFLDSHVECNVGWLEPLLERVYLSRKKVACPVIEVINDKDMSYMTVDNFQRGIFVWPMNFGWRTIPPDIVAKNKIKETDIIRCPVMAGGLFSIDKTYFFELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCKSFKWYLENVFPDLKAPIVRASGVLINVALGKCISIKNTTAILEDCDGSSKLQQFNYTWLRLIKQGEWCLAPVPDNGALTLHPCDNRNKGLKWLHKSTSVFHPELVNHIVFGNYHQLLCLEGNMSLKTLKVAACDPVKPYQKWKFEKYYED", "length": 940, "header": "tr|I3LCH7-1|I3LCH7_PIG Isoform 1 of Polypeptide N-acetylgalactosaminyltransferase OS=Sus scrofa OX=9823 GN=GALNT5 PE=3 SV=2 CANONICAL=I3LCH7-1" }, "locus": { "chromosome": "15", "start_pos": 64280151, "end_pos": 64242250, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030069.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030069.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021752.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021752.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627600", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627600", "resource": "KEGG Pathway" }, { "id": "R-SSC-913709", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913709", "resource": "Reactome", "description": "O-linked glycosylation of mucins" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BKQ9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene_name": "GALNT5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNKIRKFFRGSGRVLAFIFAASVIWLLFDMAALRLSFSEINTQILKEDIVRRERVGFRVQSDQVKSLDSSRTEMKPPWKGHGKGVWGKENFRKTEESKLKVEDDLDQTQKERKVQNAPGRGKVAPLWHPAYRQTHPVTFTKWKTEGRDIRPAVSSHPMTPKQMTAQGLEKTPFIAARGTPLAKISVHTGPVGINKQGPKSHGLNSDISKQAAERYPTVTTSLSNDRLKQRYQAGVNERNYPASPPVPRPREAIALNKTETPSKELNANRHKANKNLTFSKFIANSDRLKKPSINEIQWGGLLKDDRAKVAGGKKLNLSESHVVIITKEEELKTDTREVPNSNTKTTSTIVLGKSQEKRIGMKNNEASFSSLALQRAAVSQANQALTEGQELGKINLTAKTRPAQLNQSQTKALSPEDGRMHRVLRIDATLSPRDPKAPGQFGRPVVVPHGKEKEVERRWKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQLVHNNLPTTSIIMCFVDEVWSTLLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKDNLDKYMSQFPKVRILRLKERHGLIRARLAGAQKATGDVLTFLDSHVECNIGWLEPLLERVYLSRKKVACPVIEVINDKDMSYMTVDNFQRGIFVWPMNFGWRTIPPDVVAKNKIKETDIIRCPVMAGGLFSIDKNYFFELGTYDPGLDVWGGENMELSFKVWMCGGEIEIVPCSRVGHIFRNDNPYSFPKDRMKTVERNLGRVAEVWLDEYKELFYGHGNHLIDQGLDVGNLTQQRELRKKLKCKSFKWYLENVFPDLKAPIVRASGVLINVALGKCISIRNTTAILEDCDGSSQLQQFNYTWLRLIKHGAWCLAPVPDNGALRLHLCDNRNKGLRWLHKSTSVFRPELVNHLVFGNYHQLLCLEGDFTQKTLKVAPCDPAKPDQKWKFENYYED", "length": 940 }, "evidence": [ { "id": "I3LCH7", "url": "https://omabrowser.org/oma/group/I3LCH7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O88422-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "Galnt5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNKIRKFFRGSGRVLAFIFVASVIWLLFDMAALRLSFSEINTGILKEDIMRREQTGFRVEADQMTILSPSSRGMRPPRNGAGGKESFRKAENRVLKVEENVDQVQRKGKMQFLLGRGKAVSLWHRTHVQTLPVTLPMQKTQGRDSKPEVSSLHMMSKQTTVLGSEKDSFTVSRGVPLNKTAEHTETLDKKQEAPENYNLSSDTSKQASQRALNVTISVRTDRSKQQSQTVTKSSIQFASLPILKPEEVTVTKKTEAQGKDLKYEAHKARPLLKFTADVGHLKKQSTNETGLGVLPEADGAKVAPGKKLNFSESQIVIITKEEGQKTDTKEVPNSKIQTVFPKLLGESQGKHIPRSQSQTLSSPLAPKRAVSQSKPTLAEELHTARSNLTAKATTVGHQQSHANISENPGKHHVLRIDVTLSPRDLNAPGQFGRPVVVPPGKKKEAEQRWKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQLVHNDLPTTSIIMCFVDEVWSALLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKANLDKYMSQFPKVRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVYLNRKKVACPVIEVINDKDMSYMTVDNFQRGVFTWPMNFGWRTIPPDVIAKNGIKETDIIRCPVMAGGLFSIDKSYFYELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCQSFKWYLDNVFPDLKAPVVRASGVFINLALGKCVSIKNITVVLEDCDGSSELQQFNYTWVRLIKHGEWCVAPIPDKGSLTLYPCDNRNNRLKWLHRSASAFHPELVDHIVFESYQQLLCMEGNFSQKTLKLAACNPTEPQQKWKFEKYYDV", "length": 930 }, "evidence": [ { "id": "I3LCH7", "url": "https://omabrowser.org/oma/group/I3LCH7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNRIRKFFRGSGRVLAFIFVASVIWLLFDMAALRLSFSEINTRVIKEDIVRRERIGFRVQPDQGKIFYSSIKEMKPPLRGHGKGAWGKENVRKTEESVLKVEVDLDQTQRERKMQNALGRGKVVPLWHPAHLQTLPVTPNKQKTDGRGTKPEASSHQGTPKQTTAQGAPKTSFIAAKGTQVVKISVHMGRVSLKQEPRKSHSPSSDTSKLAAERDLNVTISLSTDRPKQRSQAVANERAHPASTAVPKSGEAMALNKTKTQSKEVNANKHKANTSLPFPKFTVNSNRLRKQSINETPLGSLSKDDGARGAHGKKLNFSESHLVIITKEEEQKADPKEVSNSKTKTIFPKVLGKSQSKHISRNRSEMSSSSLAPHRVPLSQTNHALTGGLEPAKINITAKAPSTEYNQSHIKALLPEDSGTHQVLRIDVTLSPRDPKAPGQFGRPVVVPHGKEKEAERRWKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQLVHNNLPTTSVIMCFVDEVWSTLLRSVHSVINRSPPHLIKEILLVDDFSTKDYLKDNLDKYMSQFPKVRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVYLSRKKVACPVIEVINDKDMSYMTVDNFQRGIFVWPMNFGWRTIPPDVIAKNRIKETDTIRCPVMAGGLFSIDKSYFFELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCKSFKWYLENVFPDLRAPIVRASGVLINVALGKCISIENTTVILEDCDGSKELQQFNYTWLRLIKCGEWCIAPIPDKGAVRLHPCDNRNKGLKWLHKSTSVFHPELVNHIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKFEKYYEA", "length": 940 }, "evidence": [ { "id": "I3LCH7", "url": "https://omabrowser.org/oma/group/I3LCH7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8C102-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "Galnt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNKIRKFFRGSGRVLAFIFAASVIWLLFDMAALRLSFSEINAGLLKEDIIRREHTGFRVEPDQVKVLYTSIRGMGLPRNGAWGKENFRKAENHELKVEENMDQVQRKGKMQNLLGRRKAVPLWHLAHLQTLPVTIPMQKTQGRDSKPEVSSQYMMSKWMTVLESEKTPFTASRGVPLTKIAGRTETFDKKQEAPQNYNVSSDTSKQASERTLNMTISVKTDRSKQKSQTVTKLRMHFASPPILKSEEVTVIKKAEAQSKDLKHEALKALPLLKFIADMGHLKNQSTNETQLGRLPEDDAAKVAPGKKLNFSESHVVIITKEEELKTDTKEVPNSKTQTVFPKLLGGSPHKQIPRNQSKTSSSPPALKKAVSQSKPTISGGLHTARSNLTAKAPTVGYQQSHANIPENPGMHHVFRIDVTLSPRDLNAPGQFGRPVVVPPEKKKEAEQRWKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQLVHNDLPTTSIIMCFVDEVWSALLRSVHSVLNRSPPHLIKEILLVDDFSTKEYLKADLDKYMSQFPKVRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVYLNRKKVACPVIEVINDKDMSYMTVDNFQRGVFTWPMNFGWKTIPPDVVAKNGIKETDIIRCPVMAGGLFSIDKSYFYELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDDYRELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCKSFKWYLDNVFPDLKAPVVRASGVLINMALGKCVSIENITVTLEDCDGSSQLQQFNYTWVRLIKHGEWCVAPIPEKGSLTLYHCDNRNNRLKWLHKSASAFHPELVDHIVFENYQQLLCMEGNFSQKTLKLAACNPMELQQKWKFEKYYEV", "length": 930 }, "evidence": [ { "id": "I3LCH7", "url": "https://omabrowser.org/oma/group/I3LCH7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "pmid": "" }, { "name": "polypeptide N-acetylgalactosaminyltransferase activity", "id": "GO:0004653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004653", "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein O-linked glycosylation", "id": "GO:0006493", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006493", "evidence": [ { "database": "UniProtKB", "id": "I3LCH7", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 200, "end_pos": 202, "annotation": "n_glycosylation_sequon" }, { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 256, "end_pos": 258, "annotation": "n_glycosylation_sequon" }, { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" }, { "start_pos": 362, "end_pos": 364, "annotation": "n_glycosylation_sequon" }, { "start_pos": 395, "end_pos": 397, "annotation": "n_glycosylation_sequon" }, { "start_pos": 406, "end_pos": 408, "annotation": "n_glycosylation_sequon" }, { "start_pos": 521, "end_pos": 523, "annotation": "n_glycosylation_sequon" }, { "start_pos": 776, "end_pos": 778, "annotation": "n_glycosylation_sequon" }, { "start_pos": 827, "end_pos": 829, "annotation": "n_glycosylation_sequon" }, { "start_pos": 845, "end_pos": 847, "annotation": "n_glycosylation_sequon" }, { "start_pos": 912, "end_pos": 914, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-913675", "name": "GALNTs transfer GalNAc to Mucins to form Tn antigens", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [ "R-ALL-9942384" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-913675", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913675" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-9942384", "participant_name": "UDP-GalNAc [Golgi lumen]", "crossref": [ { "id": "67138", "database": "ChEBI", "url": "" }, { "id": "ZINC000008551132", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LCH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCH7" }, { "id": "SM00458", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00458" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ricin B lectin", "eco_id": "ECO_0000259", "start_pos": 809, "end_pos": 935, "start_aa": "Arg", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [ { "glytoucan_ac": "G00027JG", "type": "Other", "subtype": "Other" }, { "glytoucan_ac": "G00030VN", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00031MO", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00032MO", "type": "O-linked", "subtype": "Core 1" }, { "glytoucan_ac": "G00033MO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00034MO", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00034UM", "type": "O-linked", "subtype": "Core 2" }, { "glytoucan_ac": "G00035MO", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00036MO", "type": "O-linked", "subtype": "Core 3" }, { "glytoucan_ac": "G00037MO", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00038MO", "type": "O-linked", "subtype": "Core 4" }, { "glytoucan_ac": "G00039MO", 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156092", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156092", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HKGGTVQ", "url": "https://omabrowser.org/oma/group/HKGGTVQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LCK4", "url": "https://www.orthodb.org/?gene=I3LCK4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12722", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12722", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12722:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12722:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04921", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04921", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013832854", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013832854", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LCK4", "url": "https://www.uniprot.org/uniprotkb/I3LCK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCK4-1", "url": "https://www.uniprot.org/uniprotkb/I3LCK4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQYKGTMREAGRALHLLKKREKQKEQMEVLKQRIAEETISKSKVDKKFSAHYDAVEAELKSSTVGLVTLNDMKARQEALVREREMQLAQRARREKRRRQLEAQRERERKREQRRQICGLSFSTDDGDDDSDGDREAAEPAGPRRPLGKDPAVDTSFLPDREREEEERRLREELRREWEARRERVKREEVEVTFSYWDGCGHRRAARIHKGGTVQQFLKRALQALRPDFRELRAAGVEQLLFVKEDLILPHCHTFYDLIVAQARGKSGPLFTFDVHDDVRLRSDATLEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKRWDRYTVR", "length": 330, "header": "tr|I3LCK4-1|I3LCK4_PIG Isoform 1 of Family with sequence similarity 50 member B OS=Sus scrofa OX=9823 GN=FAM50B PE=4 SV=2 CANONICAL=I3LCK4-1" }, "isoforms": [ { "isoform_ac": "I3LCK4-1", "url": "https://www.uniprot.org/uniprotkb/I3LCK4/entry#I3LCK4-1", "sequence": { "sequence": "MAQYKGTMREAGRALHLLKKREKQKEQMEVLKQRIAEETISKSKVDKKFSAHYDAVEAELKSSTVGLVTLNDMKARQEALVREREMQLAQRARREKRRRQLEAQRERERKREQRRQICGLSFSTDDGDDDSDGDREAAEPAGPRRPLGKDPAVDTSFLPDREREEEERRLREELRREWEARRERVKREEVEVTFSYWDGCGHRRAARIHKGGTVQQFLKRALQALRPDFRELRAAGVEQLLFVKEDLILPHCHTFYDLIVAQARGKSGPLFTFDVHDDVRLRSDATLEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKRWDRYTVR", "length": 330, "header": "tr|I3LCK4-1|I3LCK4_PIG Isoform 1 of Family with sequence similarity 50 member B OS=Sus scrofa OX=9823 GN=FAM50B PE=4 SV=2 CANONICAL=I3LCK4-1" }, "locus": { "chromosome": "7", "start_pos": 2310077, "end_pos": 2309088, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028061.2", "url": "https://www.ensembl.org/id/ENSSSCT00000028061.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021779.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021779.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCK4", "url": "https://www.uniprot.org/uniprotkb/I3LCK4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156092", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156092", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3Z9C2-1", "protein_name": "Family with sequence similarity 50, member B", "gene_name": "Fam50b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQYKGTMREAGRAMHLIKKREKQKEQMEVLKQRIAEETIMKSKVDKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEALLREREIQLAKREQLEQRRLQLEILREKERRRERKRKISNLSFTLDEEEDGDQEDGRQAEGAEVHSGGAKKNLGKNPDVDTSFLPDREREEEENRLREELRQEWEAKREKVKGEEVEITFSYWDGSGHRRTVRMRKGSTVQQFLKRALQGLRRDFRELRAAGVEQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTIR", "length": 335 }, "evidence": [ { "id": "I3LCK4", "url": "https://omabrowser.org/oma/group/I3LCK4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3GZ16-1", "protein_name": "Protein FAM50B", "gene_name": "Fam50b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAQYKGTMREAGRAMHLIKKREKQKEQMEVLKQRIAEETIMKSKVDKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEALLKEREMQLAKREQLEQRRLQLEMLREKERRRERKRKISNLSFTLEEEDDGDQEDGRRAEGNEVHSGGAKKNLGKNPDVDTSFLPDREREEEENRLREELRQEWEAKREKVKGEEVEITFSYWDGSGHRRTVRMRKGSTVQQFLKRALQGLRRDFRELRAAGVEQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFTFDVHDDVRLLSDATMEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDRYTIR", "length": 335 }, "evidence": [ { "id": "I3LCK4", "url": "https://omabrowser.org/oma/group/I3LCK4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9WTJ8-1", "protein_name": "Protein FAM50B", "gene_name": "Fam50b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAQYKGTMREAGRAMHLIKKREKQKEQMEVLKQRIAEETIMKSKVDKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEALLREREMQLAKREQLEQRRIQLEMLREKERRRERKRKISNLSFTLDEEEGDQEDSRQAESAEAHSAGAKKNLGKNPDVDTSFLPDREREEEENRLREELRQEWEAKREKVKGEEVEITFSYWDGSGHRRTVRMSKGSTVQQFLKRALQGLRRDFRELRAAGVEQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDRYTIR", "length": 334 }, "evidence": [ { "id": "I3LCK4", "url": "https://omabrowser.org/oma/group/I3LCK4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y247-1", "protein_name": "Protein FAM50B", "gene_name": "FAM50B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQYKGTMREAGRAMHLLKKRERQREQMEVLKQRIAEETILKSQVDKRFSAHYDAVEAELKSSTVGLVTLNDMKARQEALVRERERQLAKRQHLEEQRLQQERQREQEQRRERKRKISCLSFALDDLDDQADAAEARRAGNLGKNPDVDTSFLPDRDREEEENRLREELRQEWEAQREKVKDEEMEVTFSYWDGSGHRRTVRVRKGNTVQQFLKKALQGLRKDFLELRSAGVEQLMFIKEDLILPHYHTFYDFIIARARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGKVVLRSWYEKNKHIFPASRWEAYDPEKKWDKYTIR", "length": 325 }, "evidence": [ { "id": "I3LCK4", "url": "https://omabrowser.org/oma/group/I3LCK4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LCK4", "url": "https://www.uniprot.org/uniprotkb/I3LCK4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "I3LCK4", "url": "https://www.uniprot.org/uniprotkb/I3LCK4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LCK4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 330, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LCK4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LCK4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LCK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCK4" }, { "id": "PF04921", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04921" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FAM50A/XAP5 C-terminal", "eco_id": "ECO_0000259", "start_pos": 188, "end_pos": 328, "start_aa": "Glu", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LCK8-1", "uniprot_ac": "I3LCK8", "uniprot_id": "I3LCK8_PIG", "mass": { "chemical_mass": 51196.0, "monoisotopic_mass": 51196.0 }, "refseq": { "ac": "XP_020932144", "name": "E3 ubiquitin-protein ligase RNF25 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932144" }, "gene_names": [ { "name": "RNF25", "type": "recommended", "evidence": [ { "id": "I3LCK8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ] }, { "name": "RNF25", "type": "synonym", "evidence": [ { "id": "XP_020932144", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932144" } ] } ], "protein_names": [ { "name": "E3 ubiquitin-protein ligase RNF25", "type": "recommended", "evidence": [ { "id": "I3LCK8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCK8/entry#names_and_taxonomy" } ] }, { "name": "2.3.2.27", "type": "synonym", "evidence": [ { "id": "I3LCK8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCK8/entry#names_and_taxonomy" } ] }, { "name": "E3 ubiquitin-protein ligase RNF25 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020932144", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932144" } ] }, { "name": "RING finger protein 25", "type": "synonym", "evidence": [ { "id": "I3LCK8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCK8/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "E3 ubiquitin-protein ligase that plays a key role in the RNF14-RNF25 translation quality control pathway, a pathway that takes place when a ribosome has stalled during translation, and which promotes ubiquitination and degradation of translation factors on stalled ribosomes. Catalyzes ubiquitination of RPS27A in response to ribosome collisions, promoting activation of RNF14. RNF25 catalyzes ubiquitination of other ribosomal proteins on stalled ribosomes, such as RPL0, RPL1, RPL12, RPS13 and RPS17. Also involved in ubiquitination and degradation of stalled ETF1/eRF1. Independently of its function in the response to stalled ribosomes, mediates ubiquitination and subsequent proteasomal degradation of NKD2. May also stimulate transcription mediated by NF-kappa-B via its interaction with RELA/p65.", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8#function" }, { "database": "UniProtKB", "id": "ARBA00059811", "url": "https://www.uniprot.org/uniprotkb/ARBA00059811#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RNF25", "url": "https://www.uniprot.org/uniprotkb/I3LCK8", "locus": { "chromosome": "15", "start_pos": 120712246, "end_pos": 120719773, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016202", "url": "https://www.ensembl.org/id/ENSSSCG00000016202" } ] } } ], "crossref": [ { "id": "I3LCK8", "url": "https://alphafold.ebi.ac.uk/entry/I3LCK8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016202", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016202", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16470", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16470", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd23818", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd23818", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100626865", "url": "https://www.ncbi.nlm.nih.gov/gene/100626865", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016135", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016135", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039133", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039133", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100626865", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626865", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WEPWEIS", "url": "https://omabrowser.org/oma/group/WEPWEIS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LCK8", "url": "https://www.orthodb.org/?gene=I3LCK8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13198", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13198", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13198:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13198:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05773", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05773", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13639", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13639", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020932144", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932144", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCK8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCK8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASASATAGEEDWVLPSEVEVLESIYLDELQVVKGNSRSSPWEISITLHPATAEDQDSQYVCFTLVLQVPAQYPHEVPQISIRNPRGLSDEQIHKISQALSHVAEAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTPCYHYFHCHCLARYIQHMEHELQAQGREQEQQRQHAAAKQKAVGVQCPVCREPLVYDLASLKAAPEPQQPMELYQPDAESLRQQAERKRLYQRQQERGGIIDLEAERNRYFISLQQPPAPLEPESAVDASRGSHPPSALATEPSISSTAQTTLSPPLPVTSQYTCEKIPGLGPNQQKLGETQRAMPEPPRASRGPWRQAERRHLKGGECSVLKGTIDTQELPPPEGPLKEAMDLKPESRNQGVEGPPQEKGPGNWQDPPPRRTRDCARWERSKGRTPASSYPRLPRGRGAYRPGTRREPVSLESEDGS", "length": 459, "header": "tr|I3LCK8-1|I3LCK8_PIG Isoform 1 of E3 ubiquitin-protein ligase RNF25 OS=Sus scrofa OX=9823 GN=RNF25 PE=3 SV=2 CANONICAL=I3LCK8-1" }, "isoforms": [ { "isoform_ac": "I3LCK8-1", "url": "https://www.uniprot.org/uniprotkb/I3LCK8/entry#I3LCK8-1", "sequence": { "sequence": "MAASASATAGEEDWVLPSEVEVLESIYLDELQVVKGNSRSSPWEISITLHPATAEDQDSQYVCFTLVLQVPAQYPHEVPQISIRNPRGLSDEQIHKISQALSHVAEAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTPCYHYFHCHCLARYIQHMEHELQAQGREQEQQRQHAAAKQKAVGVQCPVCREPLVYDLASLKAAPEPQQPMELYQPDAESLRQQAERKRLYQRQQERGGIIDLEAERNRYFISLQQPPAPLEPESAVDASRGSHPPSALATEPSISSTAQTTLSPPLPVTSQYTCEKIPGLGPNQQKLGETQRAMPEPPRASRGPWRQAERRHLKGGECSVLKGTIDTQELPPPEGPLKEAMDLKPESRNQGVEGPPQEKGPGNWQDPPPRRTRDCARWERSKGRTPASSYPRLPRGRGAYRPGTRREPVSLESEDGS", "length": 459, "header": "tr|I3LCK8-1|I3LCK8_PIG Isoform 1 of E3 ubiquitin-protein ligase RNF25 OS=Sus scrofa OX=9823 GN=RNF25 PE=3 SV=2 CANONICAL=I3LCK8-1" }, "locus": { "chromosome": "15", "start_pos": 120719303, "end_pos": 120712315, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028058.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028058.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021783.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021783.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626865", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626865", "resource": "KEGG Pathway" }, { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZKQ3-1", "protein_name": "E3 ubiquitin-protein ligase RNF25", "gene_name": "RNF25", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAGEEVEAADWALPAEVEVLESIYLEELRVVRGRARSEPWEVSITLHPATAQDQDSQFVRCTLVLAVPPQYPIEAPDISISNPRGLSDEQIQKMLQTLRNVAEARLGTEVLYELIEKGKEILTDNNIPHGQCVICLYGFQEREAFTKTQCYHYFHSHCLARYAQHMEDEILMQQEEREQHLAPSPKQKVGVQCPVCRETLVYDLCALKAAPPPQHPLEPYRPDAKMLQHQEELRLIFKKQQEKGGIIDPEAEKNRYFISLQAPPATVDPGQAAAASEPLVSASNVDAPQAPCQASALEPARAPESKAEPGQPERPAVPKEPQSKRQRHRGERSGPRGQGRQSCSSSQEGAGEACHLSHGSRAPRGFGQRSERRPGGRHCQEFPKPHSRSKAAALAERKELCPEDSSPVADTVDLKEEHHNMERWTPEQGAEAQSREKENLAFNRSEHRAAPGCQGHHRPWDCGRWERSRVQDRGSYHRAPRGRGVFRPSGRREAHFVEKESSS", "length": 505 }, "evidence": [ { "id": "I3LCK8", "url": "https://omabrowser.org/oma/group/I3LCK8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0LA20-1", "protein_name": "E3 ubiquitin-protein ligase RNF25", "gene_name": "Rnf25", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGPWQRFSDISKGLRVLPSEVEVLESIYLDELQVMKGNGRSPWEIFITLHPATAEVQDSQFVCFTLVLQVPVQYPHEVPQISIRNPRGLSDEQIHKISQALGHVAKEGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTPCYHYFHCHCLARYIQHMEQELNTQEQEQQHVVTKQKAVGVQCPVCREPLVYDLASLKAAPEPQQPMELYQPSAESLRQQEELKRLYQRQQEKGGIIDLEAERNRYFISLQQPPAALEPESVVDVSRGPQPPNTLSAEQSTSLAAQSTLPTPLPMATQYVYEKTSGAGPNQQRLGETQKSMLDPPRPGRGSWRQYDRRHPKGGECCAPKGTSEIQELPPPEKPLKETVDLKAEPRNKGLTGHPQEKGPGSWQGPSARRTRDCARWERSKNRTPGSSYPHLPRGQGAYRSGTRREPLGLESEEGS", "length": 455 }, "evidence": [ { "id": "I3LCK8", "url": "https://omabrowser.org/oma/group/I3LCK8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MWS4-1", "protein_name": "E3 ubiquitin-protein ligase RNF25", "gene_name": "RNF25", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVSASVAAGDEDWVLPSEVEVLESIYLDELQVVKGNGRSSPWEIYITLHPATAEDQDSQYVCFTLVLQVPTQYPHEVPQISIRNPRGLSDEQIHKISQALSHVAEAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTPCYHYFHCHCLARYIQHMEHELQAQGREREQERQHAAPEQKAVGVQCPVCREPLVYDLASLKAAPEPQQPMELYQPDAESLRQQEERKRLYQRQQERGGIIDLEAERNRYFISLQQPPAPLEPESAIDVSRGSHQPSTLATEPSTTSATHTALSVSLPLASQYTCEKTPGAGPHLPKLGETQKAVLDPRRASRGPWRQPERRHLKGGECNTLKGTSDTQKLQSPEGPLKESMDLKPESHNQGGKGPPQDKGPGEWQGPPPRRTRDCAHWERAKNRTPASSYPRLPRGRGAYRPGPRREPVSLESEDGS", "length": 459 }, "evidence": [ { "id": "I3LCK8", "url": "https://omabrowser.org/oma/group/I3LCK8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q96BH1-1", "protein_name": "E3 ubiquitin-protein ligase RNF25", "gene_name": "RNF25", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAASASAAAGEEDWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTPCYHYFHCHCLARYIQHMEQELKAQGQEQEQERQHATTKQKAVGVQCPVCREPLVYDLASLKAAPEPQQPMELYQPSAESLRQQEERKRLYQRQQERGGIIDLEAERNRYFISLQQPPAPAEPESAVDVSKGSQPPSTLAAELSTSPAVQSTLPPPLPVATQHICEKIPGTRSNQQRLGETQKAMLDPPKPSRGPWRQPERRHPKGGECHAPKGTRDTQELPPPEGPLKEPMDLKPEPHSQGVEGPPQEKGPGSWQGPPPRRTRDCVRWERSKGRTPGSSYPRLPRGQGAYRPGTRRESLGLESKDGS", "length": 459 }, "evidence": [ { "id": "I3LCK8", "url": "https://omabrowser.org/oma/group/I3LCK8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QZR0-1", "protein_name": "E3 ubiquitin-protein ligase RNF25", "gene_name": "Rnf25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAASASTAAGEEDWVLPSEVEVLESIYLDELQVMKGNGRSPWEIFITLHPATAEVQDSQFVCFTLVLRIPVQYPHEVPQISIRNPRGLSDEQIHKISQALGHVAKEGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEAFTKTPCYHYFHCHCLARYIQHMEQELTTQEQEQERQHVVTKQKAVGVQCPVCREPLVYDLASLKAAPEPQQPMELYQPSAESLRQQEELKLLYQRQQEKGGIIDLEAERNRYFISLQQPPAALEPESAVDVSREPQPPNALSAEQSTSLADQSTLPTSLPMTTQYTYEKTSGAGPNQQRPGETQKSVLDPPRHGRGSWRQYDRRHPKGGECCTPKGTSEIHELPPPEKPLKETVDLKAEPRNKGLTGHPQEKGPGSWQGPSARRTRDCARWERSKNRTPGSCYPHLPRGQGAYRSGTRREPLGLESEEGS", "length": 456 }, "evidence": [ { "id": "I3LCK8", "url": "https://omabrowser.org/oma/group/I3LCK8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "rescue of stalled ribosome", "id": "GO:0072344", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072344", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" }, { "name": "protein K6-linked ubiquitination", "id": "GO:0085020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0085020", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" }, { "name": "protein-RNA covalent cross-linking repair", "id": "GO:0160127", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160127", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" }, { "name": "cytosolic ribosome", "id": "GO:0022626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022626", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" }, { "name": "NF-kappaB binding", "id": "GO:0051059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051059", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "I3LCK8", "url": "https://www.uniprot.org/uniprotkb/I3LCK8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-983140", "name": "Transfer of Ub from E2 to substrate and release of E2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983140", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983140" } ] }, { "id": "R-SSC-983147", "name": "Release of E3 from polyubiquitinated substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983147", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983147" } ] }, { "id": "R-SSC-983156", "name": "Polyubiquitination of substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983156", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983156" } ] }, { "id": "R-SSC-983157", "name": "Interaction of E3 with substrate and E2-Ub complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCQ6", "url": "https://www.uniprot.org/uniprotkb/I3LCQ6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-442380", "name": "", "url": 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"https://omabrowser.org/oma/group/CNLQARK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LCR1", "url": "https://www.orthodb.org/?gene=I3LCR1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24411", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24411", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24411:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24411:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03131", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03131", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003360238", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003360238", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LCR1", "url": "https://www.uniprot.org/uniprotkb/I3LCR1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCR1-1", "url": "https://www.uniprot.org/uniprotkb/I3LCR1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKYLKPWWSDGGGLLHLTILLSLAGLRVDLDLDLYLLLPPRTLLGDELLLPGGSTSPAYALSPFPALGGWGRAEPLHPKGRERDPAAPPEGQLLREIRALGVPFIPRTRVDAWLVHSVAAGDGDGAHALLGAAAASSAGGVGASVDGVSQAAPGGGGDPRAAPSSPLAAGEEEKTPAEPTAQVSDAGGHASEENEGLRTAERGSQHGENERRASAQKEKSLQQKTEDEKKTAERPAWEAEKTAESRNERHQNGTETSFSLEDLFQLLSSQPENLLEGISLGDIIPPLPGSINDGMNSPTHNFSQAISQDVNLHEAMLLCPDNVFRSDPAPRISQPQEPFLQLNSTFNPEQPFPGTNLTGFLPLDSQDLLYDLDINIFDEINLMSLATEGSFDPMEVSQLFEEPDSDSGLSLNSSLSSTSVTKSNSSHSICEGAIGYSSDLESLSQHDFEGAVGGYHAEPSKLCHTDQRSVSHFHEALAFQHILHNHTYHIQPSAPESNSQSFSWPGKSQKIRSRCHNDTDRNLSRDERRAKALHIPFSVDEIVRMPVESFNGMLSRHYLTDLQLSLIRDIRRRGKNKVAAQNCRKRKLDVLLNLEDDVCNLQAKKETLKRERIQCHKAINIMRQKLHDLYHDVFSRLRDDEGRPVNPSQYALQCSQDGSVLIVPKELVTSGHKKENEKGKRKREKN", "length": 686, "header": "tr|I3LCR1-1|I3LCR1_PIG Isoform 1 of Nuclear factor erythroid 2-related factor 3 OS=Sus scrofa OX=9823 GN=NFE2L3 PE=3 SV=2 CANONICAL=I3LCR1-1" }, "isoforms": [ { "isoform_ac": "I3LCR1-1", "url": "https://www.uniprot.org/uniprotkb/I3LCR1/entry#I3LCR1-1", "sequence": { "sequence": "MKYLKPWWSDGGGLLHLTILLSLAGLRVDLDLDLYLLLPPRTLLGDELLLPGGSTSPAYALSPFPALGGWGRAEPLHPKGRERDPAAPPEGQLLREIRALGVPFIPRTRVDAWLVHSVAAGDGDGAHALLGAAAASSAGGVGASVDGVSQAAPGGGGDPRAAPSSPLAAGEEEKTPAEPTAQVSDAGGHASEENEGLRTAERGSQHGENERRASAQKEKSLQQKTEDEKKTAERPAWEAEKTAESRNERHQNGTETSFSLEDLFQLLSSQPENLLEGISLGDIIPPLPGSINDGMNSPTHNFSQAISQDVNLHEAMLLCPDNVFRSDPAPRISQPQEPFLQLNSTFNPEQPFPGTNLTGFLPLDSQDLLYDLDINIFDEINLMSLATEGSFDPMEVSQLFEEPDSDSGLSLNSSLSSTSVTKSNSSHSICEGAIGYSSDLESLSQHDFEGAVGGYHAEPSKLCHTDQRSVSHFHEALAFQHILHNHTYHIQPSAPESNSQSFSWPGKSQKIRSRCHNDTDRNLSRDERRAKALHIPFSVDEIVRMPVESFNGMLSRHYLTDLQLSLIRDIRRRGKNKVAAQNCRKRKLDVLLNLEDDVCNLQAKKETLKRERIQCHKAINIMRQKLHDLYHDVFSRLRDDEGRPVNPSQYALQCSQDGSVLIVPKELVTSGHKKENEKGKRKREKN", "length": 686, "header": "tr|I3LCR1-1|I3LCR1_PIG Isoform 1 of Nuclear factor erythroid 2-related factor 3 OS=Sus scrofa OX=9823 GN=NFE2L3 PE=3 SV=2 CANONICAL=I3LCR1-1" }, "locus": { "chromosome": "18", "start_pos": 46250014, "end_pos": 46219279, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027225.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027225.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021838.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021838.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCR1", "url": "https://www.uniprot.org/uniprotkb/I3LCR1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622324", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622324", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A7S7-1", "protein_name": "Nuclear factor erythroid 2-related factor 3", "gene_name": "Nfe2l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLPKPWWASGGLLHLRLLLSLVGLRVDLDLCLLPPVAALWEELLPFFPTRPASASNPFSASEGWGRTPLLPAKGRLLHEVRALGVPFIPRTLVDAWLVHSVATGDADGTHGLLGTAASSAVGDGGQSASAGGGDPGEAHSSPLAAEEEEEEKAAEPTAQVPDAGGRGSQETEVLSEKSEAVDHSSQQKENEEGVSAQATSRQQRKREENKMTGASAWEAEKIVEARNESHLHWSDTSFSLEDLFQLLSSQPEHSLEGISVEDIPPFLSSVCESVNPSVHNINLNQAISHDVNLHEAMLLCSNTSIRDPSARPSQAQEPFLQLNSPTSPQQAIPAMSLPLANNQMRNLTSQDLLYDLDSNIFDGLNLMSLATGFSPLEVSQLFEEPDSGVSLNSSYNSTSLTNSNCTFDGTNLGAVGGCYPEPRKHCHVDHRTISGFHGALECHQVFHDHTYHLQSGVPEATSETFTWTGKSQKISGCLDDPDRNLSRDEERAKAMHIPFSVDEIVHMPVDSFNSMLSRYYLTDSQVSLIRDIRRRGKNKVAAQNCRKRKLDIILNLEDDICNLQAKKEALKSEQTQWNKAINTMRQKLYDLYHNVLNRLRDDQGRPVNPSHYALQYSHDGTILIVPKELVSSGHKKEVPKVKRERN", "length": 647 }, "evidence": [ { "id": "I3LCR1", "url": "https://omabrowser.org/oma/group/I3LCR1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9WTM4-1", "protein_name": "Nuclear factor erythroid 2-related factor 3", "gene_name": "Nfe2l3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLPKPWWAGGGLLQLTILLSLVGLRVDLDLFLPPPAAALWEELLPLCPTRPASASNPFSASEGWERTPLLPAKGRLLHEVRALGVPFIPRTRVDAWLVHSVATGNADGAHGLLGTAASSAVGDGGQSASAGGGDPRAAHSSPLAAEEEEEKAAEPTAQVPDAGGCGSQENGMLREKSEAVDHSSQQEENEEGVSAQAKSRQQSKTEEHKMACASAREAEKITEARNESHLHWSDTSFSLEDLFQLLSSQPEHSLEGISVEDIPPFLSSVCESVNSSAQNINLSQAISHDVNLHEAMLLYPNNTFRRDPSARSSQAQEPFLQLNPHTNPEQATPAMSLPPFDNQMRNLTSQDLLYDLDSNIFDGINLMSLATGFSPLEVSQLFEEPDSGLSLNSSYNSTSLTNSYRIYDGTVGYNSDLQSLCHDLGAVGGCYPEPHKHCHMDHRTIAGFHVSLECQQVFHDHTYHLQSGASEPTSESFAWSEKSQKTSGCLDNPDRNLSRDEQRAKALHIPFSVDEIVRMPVDSFNSMLSRYYLTDLQVSLIRDIRRRGKNKVAAQNCRKRKLDIILNLEDDICNLQAKKEALKNEQTQCSKAIDIMRQKLHGLHQDVFNRLRDDQGRPVNPSQYALQYSHDGTVLIVPKELISSGHKKEAPKGKRERRN", "length": 660 }, "evidence": [ { "id": "I3LCR1", "url": "https://omabrowser.org/oma/group/I3LCR1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y4A8-1", "protein_name": "Nuclear factor erythroid 2-related factor 3", "gene_name": "NFE2L3", "tax_id": 9606, 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"https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "I3LCR1", "url": "https://www.uniprot.org/uniprotkb/I3LCR1" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LCR1", "url": "https://www.uniprot.org/uniprotkb/I3LCR1" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3LCR1", "url": "https://www.uniprot.org/uniprotkb/I3LCR1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 252, "end_pos": 254, "annotation": "n_glycosylation_sequon" }, { "start_pos": 301, "end_pos": 303, "annotation": "n_glycosylation_sequon" }, { "start_pos": 343, "end_pos": 345, 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"UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LCS3/entry#names_and_taxonomy" } ] }, { "name": "solute carrier family 23 member 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003124027", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124027" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC23A1", "url": "https://www.uniprot.org/uniprotkb/I3LCS3", "locus": { "chromosome": "2", "start_pos": 141258323, "end_pos": 141276442, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026423", "url": "https://www.ensembl.org/id/ENSSSCG00000026423" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026423", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026423", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "396578", "url": "https://www.ncbi.nlm.nih.gov/gene/396578", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:396578", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:396578", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NVSAYCR", "url": "https://omabrowser.org/oma/group/NVSAYCR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LCS3", "url": "https://www.orthodb.org/?gene=I3LCS3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11119", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11119", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00860", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00860", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-196836", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-196836", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003124027", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124027", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCS3-1", "url": "https://www.uniprot.org/uniprotkb/I3LCS3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRAWEDAEGPTQHKSLGSAGTSTREPPGALPTEPKSDMLYKLEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGRDQYMVSQLIGTIFTCVGITTLIQTTLGIRLPLFQASAFAFLVPAKSILALERWKCPPEEEIYGNWSLPLNTSHVWHPRMREVQGAIMVSSMVEVVIGLTGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIILFSQYLRNLTFLLPAYRWGKGVTLFRVQIFKMFPIVLAIMTVWLLCYVLTLTDVLPPDPTAYGFQARTDARGDIMALAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLVLGTIGKFTALFASIPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLDSNPGAINTGIPELDQILTVLLTTEMFVGGCLAFILDNTVPGSPEERGLTQWKAGAHAHSEMSASLRSYDLPVGMSVVKRTAFLKYVPICPVFKGFSSRSKDQLPVPADAPENTDARSVCTKV", "length": 605, "header": "tr|I3LCS3-1|I3LCS3_PIG Isoform 1 of Solute carrier family 23 member 1 OS=Sus scrofa OX=9823 GN=SLC23A1 PE=3 SV=1 CANONICAL=I3LCS3-1" }, "isoforms": [ { "isoform_ac": "I3LCS3-1", "url": "https://www.uniprot.org/uniprotkb/I3LCS3/entry#I3LCS3-1", "sequence": { "sequence": "MRAWEDAEGPTQHKSLGSAGTSTREPPGALPTEPKSDMLYKLEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGRDQYMVSQLIGTIFTCVGITTLIQTTLGIRLPLFQASAFAFLVPAKSILALERWKCPPEEEIYGNWSLPLNTSHVWHPRMREVQGAIMVSSMVEVVIGLTGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIILFSQYLRNLTFLLPAYRWGKGVTLFRVQIFKMFPIVLAIMTVWLLCYVLTLTDVLPPDPTAYGFQARTDARGDIMALAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLVLGTIGKFTALFASIPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLDSNPGAINTGIPELDQILTVLLTTEMFVGGCLAFILDNTVPGSPEERGLTQWKAGAHAHSEMSASLRSYDLPVGMSVVKRTAFLKYVPICPVFKGFSSRSKDQLPVPADAPENTDARSVCTKV", "length": 605, "header": "tr|I3LCS3-1|I3LCS3_PIG Isoform 1 of Solute carrier family 23 member 1 OS=Sus scrofa OX=9823 GN=SLC23A1 PE=3 SV=1 CANONICAL=I3LCS3-1" }, "locus": { "chromosome": "2", "start_pos": 141275019, "end_pos": 141262206, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025910.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025910.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021850.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021850.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 198, "start_aa": "Thr", "end_pos": 198, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr198", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:396578", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:396578", "resource": "KEGG Pathway" }, { "id": "R-SSC-196836", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-196836", "resource": "Reactome", "description": "Vitamin C (ascorbate) metabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XZF6-1", "protein_name": "Solute carrier family 23 member 1", "gene_name": "SLC23A1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGTRSGELPQPQDASPALAPSGPQRPPGASRGPAADPGPPPTRRHFDMLYQIEDVPPWYLCILMGFQHYLTCFSGTIAVPFLLAESLCVGKDQLTVSYLIGTIFTCVGITTLIQTTVGIRLPLFQASALAFLVPAKAILALEKWRCPPEEQIYGNWVLPLNTSHIWQPRMREIQGAIVVSSLVEVFIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGERAGSHWGIAALSIVLIVLFAQYLRNVTVRLPGYRWGRGFVLLRVQIFKMFPIILAIMVMWLLCYVLTRAGVFPSHPEEYGYKARTDARGEILSVAPWFRFPYPCQWGIPTVTSAAVLGMFSATLAGIIESIGDYYSCARLSGAPAPPVHAINRGIFTEGISCIIAGLMGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAGIMLILGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLDAHPKAINTGVPELDQILTVLLTTEMFVGGTLAFILDNTIPGTREERGLVQWKAGAHADSTASADLRSYDFPFGMSAVRRSRWLRHMPICPLFTGFVWRAKKSHAADDGTQDGTDGTAVCTKRWGKALPVGMALAWFSVALP", "length": 634 }, "evidence": [ { "id": "I3LCS3", "url": "https://omabrowser.org/oma/group/I3LCS3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F6NS11-1", "protein_name": "Solute carrier family 23 member 1", "gene_name": "slc23a1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNQSETAEELKLTHSDGAVPAGGPEVQEMPSDNPKTSDGHQNHSASFDMIYRIEDVPPWYLCILLGLQHYLTCFSGTIAVPFLLAESMCVGQDQYTVSQLVGTIFTCVGITTLIQTTFGVRLPLFQASAFAFLIPAQAILRLDRWKCPPEEEIYGDWSLPLNTSHIWHPRIREIQGAIIVSSMIEVVIGFAGIPGFLLNSIGPLTVTPTVSLIGLSVFQTAGDRAGSHWGLSLLCIFLIVLFAQYLRNWACPLPSFSKEKGCHITHVQIFKMFPIIMAIMVVWLVCYILTLTNVLPDDPDLYGYKARTDARGDIMTQAPWFRFPYPCQWGLPTVTVAGVLGMFSATLAGIVESIGDYYACARLSGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAGIMLILGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQSVDLNSSRNLFVLGFSMFSGLMLPNYLDAHPGSIKTGVAELDQIITVLLTTEMFVGGFLAFVLDNTIPGTRKERGLVEWVDEGSSGAGTVKSDTYNFPIGMGLVRKTGCLRYLPICPTFRGFKSSCRKNKEEEDEEDIKIKEGVTDAPIEMVCTKI", "length": 622 }, "evidence": [ { "id": "I3LCS3", "url": "https://omabrowser.org/oma/group/I3LCS3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9UHI7-1", "protein_name": "Solute carrier family 23 member 1", "gene_name": "SLC23A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRAQEDLEGRTQHETTRDPSTPLPTEPKFDMLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGHDQHMVSQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSLPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLNYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIILFSQYLRNLTFLLPVYRWGKGLTLLRIQIFKMFPIMLAIMTVWLLCYVLTLTDVLPTDPKAYGFQARTDARGDIMAIAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIMLVLGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLESNPGAINTGILEVDQILIVLLTTEMFVGGCLAFILDNTVPGSPEERGLIQWKAGAHANSDMSSSLKSYDFPIGMGIVKRITFLKYIPICPVFKGFSSSSKDQIAIPEDTPENTETASVCTKV", "length": 598 }, "evidence": [ { "id": "I3LCS3", "url": "https://omabrowser.org/oma/group/I3LCS3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9WTW7-1", "protein_name": "Solute carrier family 23 member 1", "gene_name": "Slc23a1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKAQEDPGSSKQHECPDSAGTSTRDQQAPLPAEPKFDMLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGRDQHMISQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSMPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIVLFSQYLRNLTFLLPVYRWGKGLTLFRIQIFKMFPIVLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLDSNPGAINTGVPEVDQILTVLLTTEMFVGGCLAFILDNTVPGSPEERGLIQWKAGAHANSETLASLKSYDFPFGMGMVKRTTFFRYIPICPVFRGFSKTENQPAVLEDAPDNTETGSVCTKV", "length": 604 }, "evidence": [ { "id": "I3LCS3", "url": "https://omabrowser.org/oma/group/I3LCS3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "L-ascorbate:sodium symporter activity", "id": "GO:0008520", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008520", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "L-ascorbic acid transmembrane transporter activity", "id": "GO:0015229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015229", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "dehydroascorbic acid transmembrane transporter activity", "id": "GO:0033300", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033300", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "urate transmembrane transporter activity", "id": "GO:0015143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015143", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "L-ascorbic acid transmembrane transport", "id": "GO:0015882", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015882", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "lung development", "id": "GO:0030324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030324", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "brain development", "id": "GO:0007420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007420", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "response to toxic substance", "id": "GO:0009636", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009636", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" }, { "name": "basal plasma membrane", "id": "GO:0009925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009925", "evidence": [ { "database": "UniProtKB", "id": "I3LCS3", "url": "https://www.uniprot.org/uniprotkb/I3LCS3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 145, "end_pos": 147, "annotation": "n_glycosylation_sequon" }, { "start_pos": 151, "end_pos": 153, "annotation": "n_glycosylation_sequon" }, { "start_pos": 237, "end_pos": 239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 384, "end_pos": 386, "annotation": "n_glycosylation_sequon" }, { "start_pos": 460, "end_pos": 462, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 198 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 145, "end_pos": 147 }, { "start_pos": 151, "end_pos": 153 }, { "start_pos": 237, "end_pos": 239 }, { "start_pos": 384, "end_pos": 386 }, { "start_pos": 460, "end_pos": 462 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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More details and caveats of the event inference in Reactome. 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"length": 2511, "header": "tr|I3LD80-1|I3LD80_PIG Isoform 1 of Cullin-9 OS=Sus scrofa OX=9823 GN=CUL9 PE=3 SV=4 CANONICAL=I3LD80-1" }, "isoforms": [ { "isoform_ac": "I3LD80-1", "url": "https://www.uniprot.org/uniprotkb/I3LD80/entry#I3LD80-1", "sequence": { "sequence": "MVGERRAGDLMVPLGPRLQAYPEELLRQRPGHDGRPEYLIRWSVLKCGEVGRVGVEEGKAEHILMWLSAPEVYANCPMLLGERALSTGPQHETAGGSGSFPRDPGGLDDVALGEMEADVRALVRRAARQLAEGGTSSLTAAVLHTIHVLSAYASIGPLTGVFRETGALDLLMHMLCNPEPQIRRSAGKMLQALAAHDAGSRAHVLLSLSQQDGIEQHMDFDSRYTLLELFAETTSSEEHCMAFEGIHLPQIPGKLLFSLVKRYLCVTSLLDQLNNSPEPGAGDRGSPSSREDFGQEKSRGQRELEFSMAMGSLISELVRSMGWARNLGEQGTSPPRPSRSIFQPGISGPSLLLPSIVAIPRRQGRAFRQRAEFSSRSGYGEYVQQNLQPGMRVRMLDDYEEISAGDEGEFRQSNNGVPPVQVFWQSTGRTYWVHWYMLEILGPEEAAEETASAAAEKGAGAALLGTALPPWDWKPVDGLYSLPYLQPEPQKNEGLGYLTQAEWWELLFFIKKLDICEQQPIFQNLREKLDETPGEQALGEISVPSAMAEDLLQVLRNRFEGSALSDLLSSQIYAKYGRPPRAPSSSSSSSSPSRSCTPDPEEECKSEATFSEEETESPKAKTEPLKAEAEAGKGKTEPPMAQSDSQLFNQLLVTEGMALPPEMKEAANEMARALRGPGPRSSLDQHVAAVVATVQISSLDTHLQLSGLYALSQAVEEVTERDHPLVRPDRSLREKLVKTLVELLTNEVGEKMVVVLALRLLYLLMTKHEWRPLFAREGGIYAVLVCMQEYKTSVLVQQAGLAALKMLAVASSSEIPTFVTGRDSIHPLFDAQMTREIFASIDSATRPGSESLLLTVPAAVILMLNTEGCSSAVRNGLLLLNLLLCNHYTLGDQIITRELRDTLFRHSGIAPGTEPMPTTRTILMMLLNRYSEPPGSPEHAALESPGARGQDGSPELLIRSLVGGPSAELLLDLERVLCREGGPGGAVRPLLKRLQQESQPFLLFLRTLDAPGPNKTLLLTALSWHEVLEPCLNCLSGPSSDSEIVQELLCFLYRLASMHKDYAVVLCCLGAKEALAKVLDKHSAELLLACELRDLVTECEKHAQLYSNLTSSILAGCIQMVLGQIEDHRRTHRPINIPFFDVFLRHLCQGSSVEVKEDKCWEKVEVSSNPHRAGKLTDRNPKTYWESNGSTGSHHITLHMHRGVLVRQLTLLVASEDSSYMPARVVVFGGDSASCISTELNTVNVMPSASRVVLLENLNRFWPVIQIRIKRCQQGGIDTRVRGVEVLGPKPTFWPLFREQLCRRTCLFYTIRAQAWSRDIAEDRRRLLQLCPRLNRVLRHEQNFADRFLPDDEAAQALGKSCWEALVSPLVQNVTSPDAEGVSSLGWLLDQYLEQRESSRNPLSRAASFASRVRRLCHLLVHVEPPPGPSPEPSTRPLSRNSKGRDRSPGPSPVLPSSSLRNITQCWLSVVQEQVSRFLAAAWRAPDFVPRYCDLYERLQRAGSELFGPRAAFTLALRSGFSGALLQQSFLTAAHMSEQFARHIDQQIQGGLIGGAPGVEMLGRLQRHLEPIMVLSGLELATTFEHFYQHYMADRLLSLGSSWLEGAVLEQIGLCFPNRLPQQMLRSLSTSEELQRQFHLFQLQQLDKLLLEQEDEGEQGLEEEEDQEEEKEAEKELFIEDPSPTVSIMVLSPRCWPVSPLCYLYHPRKCLPTEFCDALDRFSNFYSQSQNHPVLDVGPHRRLQWTWLGRAELQFGDQTLHVSTVQMWLLLNFNQTEEVSVEALLKKSDLSPELLLQALLPLTTDSGPLTLQEAQDFPHGGVVQLREPGLQAQGEPLWLLPAQMYLNVEKDEGRTLEQKRNLLSCLLVRILKAHGEKGLHIDQLVCLVLEAWRKGPNPPGSLGRAVAGGVACSSSDVLSCILHLLGQGYVERRDDRPQVLMYAAPEPAGPCRGQAEVPFSGSQTCVESSKPSPEAVAALASLQLPAGRTMSPQEVEGLMEQTVRQVQETLNLDPDVAQHLLAHSHWGAEQLLQNYSDNPEPLLLAAGLCVPQAQPAPARPDHCPVCVSPLEPEDDLPALCCRHYCCKSCWNEYLTTRIEQNLVLHCTCPIADCPAQPTGAFIRSIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGCGTTCSKCGWASCFNCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAPIEKNEGCLHMTCAKCNHGFCWRCLKSWKPNHKDYYNCSAMVSKAARQEKRFQDYNERCTFHHQAREFAVNLRNRVSAIHEVPPPKCFTFLSDACRGLEQARKVLAYACVYSFYNQDTEHVDVVEQQTETLELHTNALQILLEETLLRCRDLASSLRLLRAEHLNTGLELLRRIQERMLAILQHSTQDFRVGLQSPSLEAREVKGSNVPGSQPQGSSGLEGDEEEEDDEEDDVPEWQQDEFEEELDNDSFSYDEESENLDRETFFFGDEEEDDEAYD", "length": 2511, "header": "tr|I3LD80-1|I3LD80_PIG Isoform 1 of Cullin-9 OS=Sus scrofa OX=9823 GN=CUL9 PE=3 SV=4 CANONICAL=I3LD80-1" }, "locus": { "chromosome": "7", "start_pos": 38263279, "end_pos": 38226611, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030706.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030706.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022009.4", "url": "https://www.ensembl.org/id/ENSSSCP00000022009.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1685, "start_aa": "Thr", "end_pos": 1685, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1685", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LD80", "url": "https://www.uniprot.org/uniprotkb/I3LD80" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8951664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "resource": "Reactome", "description": "Neddylation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Cul7-RING ubiquitin ligase complex", "id": "GO:0031467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031467", "evidence": [ { "database": "UniProtKB", "id": "I3LD80", "url": "https://www.uniprot.org/uniprotkb/I3LD80" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LD80", "url": "https://www.uniprot.org/uniprotkb/I3LD80" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LD80", "url": "https://www.uniprot.org/uniprotkb/I3LD80" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LD80", "url": "https://www.uniprot.org/uniprotkb/I3LD80" } ], "pmid": "" }, { "name": "ubiquitin protein ligase binding", "id": "GO:0031625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031625", "evidence": [ { "database": "UniProtKB", "id": "I3LD80", "url": "https://www.uniprot.org/uniprotkb/I3LD80" } ], "pmid": "" }, { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "I3LD80", "url": "https://www.uniprot.org/uniprotkb/I3LD80" } ], "pmid": "" }, { "name": "ubiquitin ligase complex scaffold activity", "id": "GO:0160072", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160072", "evidence": [ { "database": "UniProtKB", 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} ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LDA5-1", "uniprot_ac": "I3LDA5", "uniprot_id": "I3LDA5_PIG", "mass": { "chemical_mass": 61199.0, "monoisotopic_mass": 61199.0 }, "refseq": { "ac": "XP_020953010", "name": "EH domain-containing protein 4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953010" }, "gene_names": [ { "name": "EHD4", "type": "recommended", "evidence": [ { "id": "I3LDA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDA5" } ] }, { "name": "EHD4", "type": "synonym", "evidence": [ { "id": "XP_020953010", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953010" } ] } ], "protein_names": [ { "name": "EH domain containing 4", "type": "synonym", "evidence": [ { "id": "I3LDA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDA5/entry#names_and_taxonomy" } ] }, { "name": "EH domain-containing protein 4", "type": "synonym", "evidence": [ { "id": "XP_020953010", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953010" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDA5", "url": "https://www.uniprot.org/uniprotkb/I3LDA5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EHD4", "url": "https://www.uniprot.org/uniprotkb/I3LDA5", "locus": { "chromosome": "1", "start_pos": 129458686, "end_pos": 129374613, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000020666", "url": "https://www.ensembl.org/id/ENSSSCG00000020666" } ] } } ], "crossref": [ { "id": "ENSSSCG00000020666", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000020666", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00052", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00052", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd09913", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09913", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100738234", "url": "https://www.ncbi.nlm.nih.gov/gene/100738234", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000261", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000261", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030381", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030381", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031692", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031692", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738234", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738234", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ISAKKEM", "url": "https://omabrowser.org/oma/group/ISAKKEM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LDA5", "url": "https://www.orthodb.org/?gene=I3LDA5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11216", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11216", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11216:SF57", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11216:SF57", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00350", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00350", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12763", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12763", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16880", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16880", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18150", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18150", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020953010", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020953010", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LDA5", "url": "https://www.uniprot.org/uniprotkb/I3LDA5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDA5-1", "url": "https://www.uniprot.org/uniprotkb/I3LDA5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFSWMGRQAGGRERAGGADAVQTVTGGLRSLYLRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPSVFGKENKKRELISRLPEIYIQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLSSKISSLMSLISQEEMSMPTQLVQGGAFDGTAEGPFNQGYGEGAKEGADEEEWVVAKDKPVYDELFYTLSPVNGKISGVNAKKEMVTSKLPNSVLGKIWKLADCDCDGMLDEEEFALAKHLIKIKLDGYELPNSLPPHLVPPSHRKSLQKAD", "length": 541, "header": "tr|I3LDA5-1|I3LDA5_PIG Isoform 1 of EH domain containing 4 OS=Sus scrofa OX=9823 GN=EHD4 PE=1 SV=2 CANONICAL=I3LDA5-1" }, "isoforms": [ { "isoform_ac": "I3LDA5-1", "url": "https://www.uniprot.org/uniprotkb/I3LDA5/entry#I3LDA5-1", "sequence": { "sequence": "MFSWMGRQAGGRERAGGADAVQTVTGGLRSLYLRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPSVFGKENKKRELISRLPEIYIQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLSSKISSLMSLISQEEMSMPTQLVQGGAFDGTAEGPFNQGYGEGAKEGADEEEWVVAKDKPVYDELFYTLSPVNGKISGVNAKKEMVTSKLPNSVLGKIWKLADCDCDGMLDEEEFALAKHLIKIKLDGYELPNSLPPHLVPPSHRKSLQKAD", "length": 541, "header": "tr|I3LDA5-1|I3LDA5_PIG Isoform 1 of EH domain containing 4 OS=Sus scrofa OX=9823 GN=EHD4 PE=1 SV=2 CANONICAL=I3LDA5-1" }, "locus": { "chromosome": "1", "start_pos": 129456824, "end_pos": 129374680, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022785.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022785.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022034.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022034.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDA5", "url": "https://www.uniprot.org/uniprotkb/I3LDA5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738234", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738234", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B3LF48-1", "protein_name": "EH domain-containing protein 2", "gene_name": "EHD2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "METSSTISIGSCLKEHQKIYKEWFNIADSDGDGRVSGNDATKFFAMSKLSRQELKQVWAVADSKRQGFLGLSEFITAMKLVSLAQEGHEITSDLLKGSIDMKSVELPVLEGLENVVSKQKVSKTNVDVEDNVVTKPQVTAKTPWFKSKSIIKPQVNVVTIVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNGLTSFGGAFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYDFTGVISWFASKCDMILLLFDPHKLDISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPINEVAVGPIGKELFEKEQNDLLADLMDVPKKACDRKINEFVKRARSAKINAYIMSHLKKEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLPAGDFPSVEHFREVLGGYNIDKFEKLKPKMIQAVDDMLGYDIPDLLKKFRNPYDN", "length": 546 }, "evidence": [ { "id": "I3LDA5", "url": "https://omabrowser.org/oma/group/I3LDA5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "E1BJV0-1", "protein_name": "EH domain containing 4", "gene_name": "EHD4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFSWLGRQAGGRGGTGADPVQTVTGGLRSLYQRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGNTPGNALVVDPKKPFRKLGRFGNAFLNRFMCSQLPNEVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWTQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISFLKKEMPSMFGKENKKRELISRLPEIYIQLQREYHISAGDFPKVKAMQEKLENYDFTKFHSLKPKLIEAVDNMLTNKISSLMNLISQEEMSMPPPLVQGGAFDGTAESPFNQGYGEGAKEGADEEEWVVAKDKPVYDELFYTLSPINGKISGINAKKEMVTSKLPNSVLGKIWKLADCDGDGMLDEEEFALAKHLIKIKLSGYELPSSLPPHLVPPSHRKSLSKAD", "length": 540 }, "evidence": [ { "id": "I3LDA5", "url": "https://omabrowser.org/oma/group/I3LDA5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NV47-1", "protein_name": "EH domain containing 4", "gene_name": "EHD4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MFSWLGKQGGGRERGVGGSDVVQTVTGGLRDLYLRKLLPLEEHYRFHEFHSPALEEADFENKPMVLLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGESEGSVPGNALVVDPKKPFRKLSRFGNAFLNRFLCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLRNTENRRLFEAEAQDLFQDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPTMFGKENKKKELISRLPEIYSQLQREYHISAGDFPEVRKMQEQLEMCDFTKFHSLKPKLIEAVDNMLANKIASLMNLITQEESNMPTEMVHGGAFDGTMAGPFGQGYGEGAKEGADEDEWVVAKDKPAYDEIFYTLSPINGKISGINAKKEMVTSKLPNSVLGKIWKLADCDGDGMLDEEEFALAKHLIKIKLDGYELPGTLPPHLVPPSHRKPLQTAE", "length": 542 }, "evidence": [ { "id": "I3LDA5", "url": "https://omabrowser.org/oma/group/I3LDA5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8R3Z7-1", "protein_name": "EH-domain containing 4", "gene_name": "Ehd4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRKDLRSLLNNERAPVTQRLMIGRCGRGRARERAVARASPAPRVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPSMFGKENKKRELIFRLPEIYVQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLTNKISSLMSLISQEEMNMPTQMVQGGAFDGTTEGPFNQGYGEGAKEGADEEEWVVAKDKPVYDELFYTLSPINGKISGVNAKKEMVTSKLPNSVLGKIWKLADCDCDGMLDEEEFALAKHLIKIKLDGYELPNSLPPHLVPPSHRKSLPKAD", "length": 549 }, "evidence": [ { "id": "I3LDA5", "url": "https://omabrowser.org/oma/group/I3LDA5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9EQP2-1", "protein_name": "EH domain-containing protein 4", "gene_name": "Ehd4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWMGRQAGGRERSGGMDAVQTVTGGLRSLYQRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPNMFGKENKKRELIYRLPEIYVQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLTNKISSLMGLISQEEMNMPTQMVQGGAFDGTTEGPFNQGYGEGAKEGADEEEWVVAKDKPVYDELFYTLSPINGKISGVNAKKEMVTSKLPNSVLGKIWKLADCDCDGMLDEEEFALAKHLIKIKLDGYELPNSLPPHLVPPSHRKSLPKAD", "length": 541 }, "evidence": [ { "id": "I3LDA5", "url": "https://omabrowser.org/oma/group/I3LDA5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H223-1", "protein_name": "EH domain-containing protein 4", "gene_name": "EHD4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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}, { "id": "PS50222", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50222" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EF-hand", "eco_id": "ECO_0000259", "start_pos": 479, "end_pos": 514, "start_aa": "Leu", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LDA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDA5" }, { "id": "PS50031", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50031" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EH", "eco_id": "ECO_0000259", "start_pos": 447, "end_pos": 535, "start_aa": "Asp", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LDA6-1", "uniprot_ac": "I3LDA6", "uniprot_id": "I3LDA6_PIG", "mass": { "chemical_mass": 31084.0, "monoisotopic_mass": 31084.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "G-protein coupled receptors family 1 profile domain-containing protein", "type": "recommended", "evidence": [ { "id": "I3LDA6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDA6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "I3LDA6", "url": "https://www.uniprot.org/uniprotkb/I3LDA6#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDA6", "url": "https://www.uniprot.org/uniprotkb/I3LDA6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3LDA6", "locus": {} } ], "crossref": [ { "id": "I3LDA6", "url": "https://alphafold.ebi.ac.uk/entry/I3LDA6", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050427", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050427", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR48002", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48002", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LDA6", "url": "https://www.uniprot.org/uniprotkb/I3LDA6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDA6-1", "url": "https://www.uniprot.org/uniprotkb/I3LDA6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "PLKLVSNLSSSVVITSQLLSEPVYYMVSDFVLLGLSSSQELQLFFFVFFSVLYVVIVLGNLLIILMVTLDNTLHSLMYFLLGNLSFVDICQASFATPKMIVDFLSEHKTISFSGCIAQIFFIHLFTAGEMVLLVSIAYDRYVAICKPLHYVIIKSQRTCIVLVMISWAVGLVHTLSQLSFTMNLPFCGPNVVDSFFLILFFGPCIFIYVWPFTTYPVDKVLAIFYTIFTPILNPIIYTLRNRDMKTAMRKIMMYYLRPKKISEMPLVLRNSL", "length": 272, "header": "tr|I3LDA6-1|I3LDA6_PIG 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"Ensembl Peptide", "id": "ENSSSCP00000022035.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022035.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDA6", "url": "https://www.uniprot.org/uniprotkb/I3LDA6" } ], "reference": [ { "type": "PubMed", 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"journal": "Nature", "date": "2016", "authors": "Gu Jinke, Wu Meng, Guo Runyu, Yan Kaige, Lei Jianlin, Gao Ning, Yang Maojun", "evidence": [ { "database": "UniProtKB", "id": "I3LDC3", "url": "https://www.uniprot.org/uniprotkb/I3LDC3" } ], "reference": [ { "type": "PubMed", "id": "27654917", "url": "https://glygen.org/publication/PubMed/27654917" } ] }, { "title": "Structure of Mammalian Respiratory Supercomplex I1III2IV1.", "journal": "Cell", "date": "2016", "authors": "Wu Meng, Gu Jinke, Guo Runyu, Huang Yushen, Yang Maojun", "evidence": [ { "database": "UniProtKB", "id": "I3LDC3", "url": "https://www.uniprot.org/uniprotkb/I3LDC3" } ], "reference": [ { "type": "PubMed", "id": "27912063", "url": "https://glygen.org/publication/PubMed/27912063" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDC3", "url": "https://www.uniprot.org/uniprotkb/I3LDC3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] }, { "title": "The coupling mechanism of mammalian mitochondrial complex I.", "journal": "Nat. 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"categories": [ "Protein Classification" ] }, { "id": "PF07842", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07842", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-72163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020942970", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942970", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LDF5", "url": "https://www.uniprot.org/uniprotkb/I3LDF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LDF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAHRPQRTFRQRRTDSSDSDSGQEPTAEPGVPGEQVAPGPAEEGMLSEGGCAEVAERLRRARGGGRGRGRVWASSRRAAKAAPRLDPGSDAPESRTVDLSTDREDGIHHSSESKDDQSSSSNSSSSLEEEEEFLSTVNVPDAAFIQAAYRKRELARAQEDYISLDVKHVSNISNMKKNSEGSESEPDDHENIIPFTPKPQTLRQRMAEETTNRDEETSEDSQEDENQDIWEQQQMRKAVKITEGRDIDLSYSSESQTVKKFDVSISFPPINLEIIKKQLNNRLTLLQDTHRSHLREYEKYVEDIKTSKSTIQNLENSSSQALNFKFYKSMKIYVENLIDCLNEKIISIQEIESAMHALLLKQAMIFMKRRQDELKHEATYLQQLSRKAEASTNRGLDVDEKTQWIFEEIESRRAQRRQARALSGNCTHQEGMSSDDELSSADTIDFQKSRGDILQNHKKIFEDVHDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRFQLIDWNPLKFDSIGLKQMPWFTSIKEFIDSSMEDSKKKNSSDKKILSAVINKAVIPRLSDFVEFVWDPLSTSQTTSLIRQCKMILEEHSTCENEDSKGKQDLLKRIVLRMKKAIEDDVFIPLYPLSATENRTSPHAKFQERQFWSGLKLFHNILLWNGLIPEDTLQELGLGKLLNRYLIVALNAIPGPDVVKKCNQIAAYLPEEWFQNSAMRTSIPQLENFIQFLLQSAHKLSRSEIRDEIKEIIIILVKIKALTQAESFLEEYHLDHLKSVIKEV", "length": 784, "header": "tr|I3LDF5-1|I3LDF5_PIG Isoform 1 of GC-rich sequence DNA-binding factor 2 OS=Sus scrofa OX=9823 GN=GCFC2 PE=3 SV=2 CANONICAL=I3LDF5-1" }, "isoforms": [ { "isoform_ac": "I3LDF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LDF5/entry#I3LDF5-1", "sequence": { "sequence": "MAHRPQRTFRQRRTDSSDSDSGQEPTAEPGVPGEQVAPGPAEEGMLSEGGCAEVAERLRRARGGGRGRGRVWASSRRAAKAAPRLDPGSDAPESRTVDLSTDREDGIHHSSESKDDQSSSSNSSSSLEEEEEFLSTVNVPDAAFIQAAYRKRELARAQEDYISLDVKHVSNISNMKKNSEGSESEPDDHENIIPFTPKPQTLRQRMAEETTNRDEETSEDSQEDENQDIWEQQQMRKAVKITEGRDIDLSYSSESQTVKKFDVSISFPPINLEIIKKQLNNRLTLLQDTHRSHLREYEKYVEDIKTSKSTIQNLENSSSQALNFKFYKSMKIYVENLIDCLNEKIISIQEIESAMHALLLKQAMIFMKRRQDELKHEATYLQQLSRKAEASTNRGLDVDEKTQWIFEEIESRRAQRRQARALSGNCTHQEGMSSDDELSSADTIDFQKSRGDILQNHKKIFEDVHDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRFQLIDWNPLKFDSIGLKQMPWFTSIKEFIDSSMEDSKKKNSSDKKILSAVINKAVIPRLSDFVEFVWDPLSTSQTTSLIRQCKMILEEHSTCENEDSKGKQDLLKRIVLRMKKAIEDDVFIPLYPLSATENRTSPHAKFQERQFWSGLKLFHNILLWNGLIPEDTLQELGLGKLLNRYLIVALNAIPGPDVVKKCNQIAAYLPEEWFQNSAMRTSIPQLENFIQFLLQSAHKLSRSEIRDEIKEIIIILVKIKALTQAESFLEEYHLDHLKSVIKEV", "length": 784, "header": "tr|I3LDF5-1|I3LDF5_PIG Isoform 1 of GC-rich sequence DNA-binding factor 2 OS=Sus scrofa OX=9823 GN=GCFC2 PE=3 SV=2 CANONICAL=I3LDF5-1" }, "locus": { "chromosome": "3", "start_pos": 67593599, "end_pos": 67547861, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031635.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031635.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022086.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022086.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDF5", "url": "https://www.uniprot.org/uniprotkb/I3LDF5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625157", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625157", "resource": "KEGG Pathway" }, { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AVA2-1", "protein_name": "GC-rich sequence DNA-binding factor 2", "gene_name": "Gcfc2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"protein_name": "GC-rich sequence DNA-binding factor 2 isoform X1", "gene_name": "Gcfc2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALRPQRTFRRRQVESSDSDGDGAEERPAEVPADAGRPSAGGRAEGAEPPRRARGNRGRGRVWASSRRSPGTASRRDRGAVIFLESGTVDLSTDEEEEAHPSSESKDDQSPASHSSSSLEEKEVSPIVKIPDAAFIQEARRKRELARTPGDYISLDVNHPSTTCDNKRSNEEDPESDPDDYEKRILFAPKPQTLRQRMAEETSFRNEEESEDSQEDENQDIWEQQQMRKAVKIREGQNIDLSPKSDSQTLKKFDTSISFPPVNLEIIKKQLNNRLTLLQDTHRSHQREYEKYIEDIKSSKTAIQNLENASDQTLNYKFYKGMKIYVENIIDCLNEKIVIIEELESSTYTLLFKQSEALLKRRQDELKCESSYLQQLSRKAETSVNGSLAPDEKDQRILEEIEARRMQRRQARALSGNCDHQEGTSSDDELAPAEMTNFQKRQGDILQDCKRVFEDVHDDFCNVQNILLKFQQWREKFPDSYYEAFVGFCLPKLLSPLIRVQLLDWNPLKLDSMALNQMPWFTSITEFMDGSSEDPREEDGSDKKMLSAVINKTVVPRLADFVEFIWDPMSTSQTRSLTVHCRLLFEQLASENEVSKSKQDLLKSVVGRIKKSIEDDVFIPLYPKSSEEGKMSPHSKFQERQFWGALKLFRNILLWNGLLSDDTLQDLGLGKLLNRYLIIALTNAIPGPDAVKKCSQIAACLPEKWFENSAMRTSIPQLENFIQFLLQSAHKLSTGEFRNEVNEIILILVKVKALNQAESLREEHHLEPPISPISGV", "length": 776 }, "evidence": [ { "id": "I3LDF5", "url": "https://omabrowser.org/oma/group/I3LDF5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BDX0-1", "protein_name": "GC-rich sequence DNA-binding factor 2", "gene_name": "GCFC2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"MSVLLTLCVALLPLATPGQGVRRWEPCTDLRPLDILAEAVPPDGVAAGIRVTRVQGARGLQLSAAAPHTLSFPASRIFSRCDLFPEEFSIVVTLNVPSLPPKKNEYLFTVVAEQDALLLGLRYSAAQLHLLFLSQDAAGTWQTRVSFRSPALTDGQWHTLVLAVSEGAFSLTTDCGPPVDITADMPFPATLSVRGARFFIGSRRRTKGLFTGLVRQLVLLPGSDATPRLCPCRNAELAALSIPPVLQGLPGKPEENEVLKYPYETDMKVTLGSRPPCTKAEDAQFWFDASRKGLYLCVGSEWVSVLAARERLDYVEEHQRLSTNAETLGIEVFAIPEAGLFVATANRRATSAIYKWTDGKFASYQDVPTHQAQSWRHFTIGKRIFLAVANFEPNEKGQEFSVIYKWSQRRLRFTPYQRVPTHSARDWEAFEVSGEHFLAVANHREGDNHNIDSVIYKWNPGSRLFEANQTIATSGAYDWEFFTVGPYAFLAVANAFNGTSTRLQSHLYVRLGGSFQLFQSFLTFGAADWEVFHIGERIFLAVANSHRYDVETQVQNDSYVINSVIYELNVTTQTFVRFQEIPTCSALDWEFFSVGEDSFLVVANSFDGNTFSVNSIIYRWQGYEGFVAVHSLPTFGCRDWEAFRTAAGSYLVYSSAKEPLSRVLKLRTV", "length": 669, "header": "tr|I3LDP9-1|I3LDP9_PIG Isoform 1 of Thrombospondin type laminin G domain and EAR repeats OS=Sus scrofa OX=9823 GN=TSPEAR PE=4 SV=2 CANONICAL=I3LDP9-1" }, "isoforms": [ { "isoform_ac": "I3LDP9-1", "url": "https://www.uniprot.org/uniprotkb/I3LDP9/entry#I3LDP9-1", "sequence": { "sequence": "MSVLLTLCVALLPLATPGQGVRRWEPCTDLRPLDILAEAVPPDGVAAGIRVTRVQGARGLQLSAAAPHTLSFPASRIFSRCDLFPEEFSIVVTLNVPSLPPKKNEYLFTVVAEQDALLLGLRYSAAQLHLLFLSQDAAGTWQTRVSFRSPALTDGQWHTLVLAVSEGAFSLTTDCGPPVDITADMPFPATLSVRGARFFIGSRRRTKGLFTGLVRQLVLLPGSDATPRLCPCRNAELAALSIPPVLQGLPGKPEENEVLKYPYETDMKVTLGSRPPCTKAEDAQFWFDASRKGLYLCVGSEWVSVLAARERLDYVEEHQRLSTNAETLGIEVFAIPEAGLFVATANRRATSAIYKWTDGKFASYQDVPTHQAQSWRHFTIGKRIFLAVANFEPNEKGQEFSVIYKWSQRRLRFTPYQRVPTHSARDWEAFEVSGEHFLAVANHREGDNHNIDSVIYKWNPGSRLFEANQTIATSGAYDWEFFTVGPYAFLAVANAFNGTSTRLQSHLYVRLGGSFQLFQSFLTFGAADWEVFHIGERIFLAVANSHRYDVETQVQNDSYVINSVIYELNVTTQTFVRFQEIPTCSALDWEFFSVGEDSFLVVANSFDGNTFSVNSIIYRWQGYEGFVAVHSLPTFGCRDWEAFRTAAGSYLVYSSAKEPLSRVLKLRTV", "length": 669, "header": "tr|I3LDP9-1|I3LDP9_PIG Isoform 1 of Thrombospondin type laminin G domain and EAR repeats OS=Sus scrofa OX=9823 GN=TSPEAR PE=4 SV=2 CANONICAL=I3LDP9-1" }, "locus": { "chromosome": "13", "start_pos": 207412098, "end_pos": 207286309, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028457.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028457.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022183.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022183.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 16, "start_aa": "Thr", "end_pos": 16, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr16", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622925", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622925", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MFL0-1", "protein_name": "Thrombospondin-type laminin G domain and EAR repeat-containing protein", "gene_name": "Tspear", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSALLTLCAALLLLGTPGCGAQHWEPCTDLRPLDILAEVVPLNGATSGIRMVQAEGVLGLQFSATEPHTMSFPASRIFSSCDLFPEEFSIVVTLRVPNLPPKKNEYLLSLLAEERDTLLLGLRYSPTQLHFLFLTEDLAGAWQTRVSFRSPGLVDSQWHTLILAVSQGSLSLTMDCGLPIDIMADVPFPPTLSVRGARFFIGSRKRTKGLFTGLIRQLVLLPGSDATPRLCPSRNARLAELSIPRVLKRLTEKPDDNEVLKYPYEADMKVTLGSRPPCTKAEGVQFWFDAARKGLYLCADSEWVSVLTAKTKLDYVEEHQSLHTNSETLGIEVFNIPGVGLFAATANRKARSAIYKWTDGKFVSYQNIATHQAQSWRHFTIGKKIFLAVANFGPNERGQEFSVIYKWSPRKLKFTLYQRIATHSARDWEAFKVDGEHFLVVANHREGDNHNIDSVVYRWNPSSQLFEANQSIATSGAYDWEFFTVGPYSFLVVANTFNGTSTQVHSHLYIWLVGAFQLFQSFLTFGAADWEVFHIGERIFLAVANSHSYDVQMQAQNDSYVLSSVIYELNVTAQNFVKFQDIPTCSALDWEFFSVGEDHFLVVANSFDGNTFSVNSIIYRWQGYEGFVAVHKLPTFGCRDWEAFNTTAGSYLIYSSAKEPLSRVLKLRTG", "length": 670 }, "evidence": [ { "id": "I3LDP9", "url": "https://omabrowser.org/oma/group/I3LDP9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E7F9F5-1", "protein_name": "Thrombospondin-type laminin G domain and EAR repeat-containing protein", "gene_name": "tspearb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSELPLLACVLLSWIITCHSGPWRPCTDLLPLDLLSRVIPMASRVQDGIRMVQSRGARGFQFSGSPQLFSFPSSQLFINCHIFPTEFSIIVTFKIPQVAPEKSEYIFTVLEADSDELLLGLRLSHDKLHFLHKGHGSRKRITFKAVGLDDDRWHTLVLAVTGCYTILTVDCGTPLELLLERPFPEDLDTAGSTFFIASRRRWNGLFSGLMRQLVLLPGSDATSQICPSSEPRLSALSIPQTLLHLPIKPSSTDLPLHPYEAEVRVTAGVSPPCGHSEEGQLWFNTLKKGLFLCDGMMWLTMLQEKEKLDYVEDHQDLYTYSETFDIEVFHIPSVGLFIATANRDSNLGSGIYKWMDGRFERYQNISTYDAQAWQYFTVGKKKFLVVANCKSKEAGEPEQSVIYKWSSKKLKFIRYQTLITHSARDWEAFNIQDETFLAVANHRQGERNHNIDSVIYKWNQVTQFFEVNQTIPTAGAYDWEFFAVGPYYFLVVANTFNGRSTVIDSTIYIWLGGMFQPYQSITTFGAIDWEMFQIENRVFLAVANSQMLTEEGKILYSINSTIYELSMTSQTFVRFQDIETNSALDWEYFTVGDDKFLVVANSYDGNSYSLNSVIYRWQGYEGFVPVNRLSTNGCRDWEFFNTTDGYYLIYSSARAALSKVLKLRTI", "length": 666 }, "evidence": [ { "id": "I3LDP9", "url": "https://omabrowser.org/oma/group/I3LDP9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1LTU1-1", "protein_name": "Thrombospondin-type laminin G domain and EAR repeats", "gene_name": "Tspear", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSALLTLCVALLLLGTPSRGTRPWEPCTDLRPLDILAEVVPLDGATSGIRMVQAEGVRGLQFSATEPRTTSFPASRIFSSCHLFPEEFSIIVTLRVPNLPPKKNEYLLSLLAEERDRDVLLLGLRYSPTQLHFLFLSEDLAGAWQTRVSFRSPGLMDSRWHTLILAVSQGSFSLTMDCGLPVDIMADVPFPPTLSVRGARFFIGSRKRTKGRFTGVIRQLVLLPGSDATPQLCPSRNARLAELSIPQVLKRLTEKPDDKEVLKYPYEADMKVTLGSRPPCTKAEGAQFWFDAAQKGLYLCAGSEWVSVLAAKTKLDYVEEHQSLHTNSETLGIEVFNIPGVGLFAAAANRKARSAIYKWSDGKFVSYQNIATHQAQSWRHFTIGKKIFLAVANFGPNERGQEFSVIYKWSPRKLKFTLYQRIATHSARDWEAFEVDGEHFLVVANHREGDNHNIDSVVYRWNPSSQLFEANQSIATSGAYDWEFFTVGPYSFLVVANTFNGTSTQVHSHLYIWLVGAFQLFQSFLTFGAADWEVFHIGERIFLAVANSHSYDVQMQAQNDTYILSSVIYELNVTAQTFVKFQDIPTCSALDWEFFSVGEDHFLVVANSFDGNTFSVNSIIYRWQGYEGFVAVHKLPTFGCRDWEAFNTTAGSYLIYSSAKEPLSRVLKLRTD", "length": 672 }, "evidence": [ { "id": "I3LDP9", "url": "https://omabrowser.org/oma/group/I3LDP9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "J3S6Y1-1", "protein_name": "Thrombospondin-type laminin G domain and EAR repeat-containing protein", "gene_name": "Tspear", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALLMLCAVLLLLGTPSRGARPWEPCTDLRPLDILAEVVPLNGATSGIRMVQVEGVRGLQFSATEPRTTSFPASRIFSSCDFFPEEFSIIVTLRVPNLPPKKNEYLLSLLAEERDTLLLGLRYSPTQLHFLFLSEDLAGAWQTRVSFWSPGLMDSRWHTLILAVSQGSFSLTTDCGLPVDIMADVSFPPTLSVRGARFFIGSRKRTKGLFTGVIRQLVLLPGSDATPQLCPSRNARLAELSIPQVLKRLTGKPDDNEVLNYPYEADMKVTLGSRPPCTKAEGAQFWFDAAQKGLYLCAGSEWVSVLAAKTKLDYVEEHQSLHTNSETLGIEVFSIPGVGLFAAAANRKARSAIYKWTDGKFVSYQNIATHQAQSWRHFTIGKKIFLAVANFGPNERGQEFSVIYKWSPRKLKFTLYQRIATHSARDWEAFEVDGEHFLVVANHREGDNHNIDSMVYRWNPSSQLFEANQSIATSGAYDWEFFTVGPYSFLVVANTFNGTSTQVHSHLYIWLVGAFQLFQSFLTFGAADWEVFHIGERIFLAVANSHSYDVQMQAQNDSYVLSSVIYELNITAQTFVKFQDIPTCSALDWEFFSVGEDHFLVVANSFDGNTFSVNSIIYRWQGYEGFVAVHKLPTFGCRDWEAFNTTAGSYLIYSSAKEPLSRVLKLRTG", "length": 670 }, "evidence": [ { "id": "I3LDP9", "url": "https://omabrowser.org/oma/group/I3LDP9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WU66-1", "protein_name": "Thrombospondin-type laminin G domain and EAR repeat-containing protein", "gene_name": "TSPEAR", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSALLSLCFVLPLAAPGHGTQGWEPCTDLRPLDILAEVVPSDGATSGIRIVQVHGARGLQLSVAAPRTMSFPASRIFSQCDLFPEEFSIVVTLRVPNLPPKRNEYLLTVVAEESDLLLLGLRLSPAQLHFLFLREDTAGAWQTRVSFRSPALVDGRWHTLVLAVSAGVFSLTTDCGLPVDIMADVPFPATLSVKGARFFVGSRRRAKGLFMGLVRQLVLLPGSDATPRLCPSRNAPLAVLSIPRVLQALTGKPEDNEVLKYPYETNIRVTLGPQPPCTEVEDAQFWFDASRKGLYLCVGNEWVSVLAAKERLDYVEEHQNLSTNSETLGIEVFRIPQVGLFVATANRKATSAVYKWTEEKFVSYQNIPTHQAQAWRHFTIGKKIFLAVANFEPDEKGQEFSVIYKWSHRKLKFTPYQSIATHSARDWEAFEVDGEHFLAVANHREGDNHNIDSVIYKWNPATRLFEANQTIATSGAYDWEFFSVGPYSFLVVANTFNGTSTKVHSHLYIRLLGSFQLFQSFPTFGAADWEVFQIGERIFLAVANSHSYDVEMQVQNDSYVINSVIYELNVTAQAFVKFQDILTCSALDWEFFSVGEDYFLVVANSFDGRTFSVNSIIYRWQGYEGFVAVHSLPTVGCRDWEAFSTTAGAYLIYSSAKEPLSRVLRLRTR", "length": 669 }, "evidence": [ { "id": "I3LDP9", "url": "https://omabrowser.org/oma/group/I3LDP9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "pmid": "" }, { "name": "sensory perception of sound", "id": "GO:0007605", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007605", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "pmid": "" }, { "name": "tooth mineralization", "id": "GO:0034505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034505", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "pmid": "" }, { "name": "regulation of Notch signaling pathway", "id": "GO:0008593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008593", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "pmid": "" }, { "name": "ciliary membrane", "id": "GO:0060170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060170", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "pmid": "" }, { "name": "stereocilium", "id": "GO:0032420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032420", "evidence": [ { "database": "UniProtKB", "id": "I3LDP9", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 468, "end_pos": 470, "annotation": "n_glycosylation_sequon" }, { "start_pos": 497, "end_pos": 499, "annotation": "n_glycosylation_sequon" }, { "start_pos": 556, "end_pos": 558, "annotation": "n_glycosylation_sequon" }, { "start_pos": 569, "end_pos": 571, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LDP9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 669, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LDP9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LDP9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LDP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDP9" }, { "id": "SM00210", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00210" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Thrombospondin-like N-terminal", "eco_id": "ECO_0000259", "start_pos": 63, "end_pos": 223, "start_aa": "Ser", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 16 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 468, "end_pos": 470 }, { "start_pos": 497, "end_pos": 499 }, { "start_pos": 556, "end_pos": 558 }, { "start_pos": 569, "end_pos": 571 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LDR9-1", "uniprot_ac": "I3LDR9", "uniprot_id": "I3LDR9_PIG", "mass": { "chemical_mass": 46815.0, "monoisotopic_mass": 46815.0 }, "refseq": { "ac": "XP_005652497", "name": "serum deprivation-response protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005652497" }, "gene_names": [ { "name": "CAVIN2", "type": "recommended", "evidence": [ { "id": "I3LDR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ] }, { "name": "CAVIN2", "type": "synonym", "evidence": [ { "id": "XP_005652497", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005652497" } ] } ], "protein_names": [ { "name": "Caveolae associated protein 2", "type": "synonym", "evidence": [ { "id": "I3LDR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDR9/entry#names_and_taxonomy" } ] }, { "name": "serum deprivation-response protein", "type": "synonym", "evidence": [ { "id": "XP_005652497", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005652497" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CAVIN2", "url": "https://www.uniprot.org/uniprotkb/I3LDR9", "locus": { "chromosome": "15", "start_pos": 96474284, "end_pos": 96490016, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026618", "url": "https://www.ensembl.org/id/ENSSSCG00000026618" } ] } } ], "crossref": [ { "id": "I3LDR9", "url": "https://alphafold.ebi.ac.uk/entry/I3LDR9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026618", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026618", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100517010", "url": "https://www.ncbi.nlm.nih.gov/gene/100517010", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517010", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517010", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QMPNDQE", "url": "https://omabrowser.org/oma/group/QMPNDQE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LDR9", "url": "https://www.orthodb.org/?gene=I3LDR9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15240", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15240", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15240:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15240:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15237", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15237", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005652497", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005652497", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDR9-1", "url": "https://www.uniprot.org/uniprotkb/I3LDR9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGEDAAQAEKFQHLGLDMPQAKPASSSPVPSSTPSPSLNPGSTEEAIRDNSQVNAVTVLTLLDKLVNMLDAVQENQHKMEQRQISLEGSVKGIQNDLTKLSKYQASTSNTVSKLLEKSRKVSAHTRAVKERMERQCAQVKRLENNHAQLLRRNHFKVLIFQEENEIPANVFVKDPVSSPAEGKEELADENRSLEDTLHTVDLSSDDELPHNEEALEDSAEEKMEESRAEKIKRSSLRKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTSNHQKISSGKSSPFKVSPLTFGRKKVREGESPAENETKSEDMPSSEIPNDHEESSFAEGLSEASLPSALVEGKSLEGDAGRAASRGSSSAMDSNIDLAIVEDEEEESVVVEQAQRVHYAGGYMQTSEEAEQSDEEPVQPAVLQVDQTA", "length": 424, "header": "tr|I3LDR9-1|I3LDR9_PIG Isoform 1 of Caveolae associated protein 2 OS=Sus scrofa OX=9823 GN=CAVIN2 PE=1 SV=2 CANONICAL=I3LDR9-1" }, "isoforms": [ { "isoform_ac": "I3LDR9-1", "url": "https://www.uniprot.org/uniprotkb/I3LDR9/entry#I3LDR9-1", "sequence": { "sequence": "MGEDAAQAEKFQHLGLDMPQAKPASSSPVPSSTPSPSLNPGSTEEAIRDNSQVNAVTVLTLLDKLVNMLDAVQENQHKMEQRQISLEGSVKGIQNDLTKLSKYQASTSNTVSKLLEKSRKVSAHTRAVKERMERQCAQVKRLENNHAQLLRRNHFKVLIFQEENEIPANVFVKDPVSSPAEGKEELADENRSLEDTLHTVDLSSDDELPHNEEALEDSAEEKMEESRAEKIKRSSLRKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTSNHQKISSGKSSPFKVSPLTFGRKKVREGESPAENETKSEDMPSSEIPNDHEESSFAEGLSEASLPSALVEGKSLEGDAGRAASRGSSSAMDSNIDLAIVEDEEEESVVVEQAQRVHYAGGYMQTSEEAEQSDEEPVQPAVLQVDQTA", "length": 424, "header": "tr|I3LDR9-1|I3LDR9_PIG Isoform 1 of Caveolae associated protein 2 OS=Sus scrofa OX=9823 GN=CAVIN2 PE=1 SV=2 CANONICAL=I3LDR9-1" }, "locus": { "chromosome": "15", "start_pos": 96489876, "end_pos": 96478283, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025082.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025082.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022203.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022203.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 33, "start_aa": "Thr", "end_pos": 33, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr33", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517010", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517010", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y807-1", "protein_name": "Caveolae associated protein 2", "gene_name": "PRKCDBP", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGEAAGGSAVPPPAEAAGGGQVNALTVLALLEKLVSMLESVEGQQRQMEQRQRGLEGAVKGIQGDLGKLCRSHGATGAAVEKLLEKSQKVCAHTRAVRERLERQCAQVRRLEQHHAQLLRRDRFKVLIFQEENEIPAGVFAKEPVPSITEGKEEPVDENKTLEETLHAVELSSEDDIHHEDDVGDSADEKAEESRAEKIKRTSLKKVDSLKKAFSRQNIEKKMNKISTKIVSPERREKIKKSLTVHHQKSSSSKSSPFKVPLTFTVKKSREGESPAEAEDRPADTVSTDQAENEEEMSFADMHSDMTPTTSLAEESKAVIDSLEKEARMESSVMTNNNIELSIVEDDEEYGMPLEDSSQKLYDERSKPVSGEMEESDEETTQAAVLQIDQTA", "length": 392 }, "evidence": [ { "id": "I3LDR9", "url": "https://omabrowser.org/oma/group/I3LDR9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1R665-1", "protein_name": "Caveolae-associated protein 2b", "gene_name": "cavin2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGEDAVQAERSSMVSTHENQELVVPSPSPTQSSPTHSLSQLGTGATNASAGEPSSPGPLAGGTTGTLPRDGASPTGQVNAITVLTLLDKLVNMLDTVQENQHKMEVRQVEIEGAVRGIQNDMTKLSKSHTSTSNTVSKLLEKSRKVSVHMKEVKDKMDRQAVQVKKLEANHAHLIKRNNFKVLIFQEENEIPSSVFVKEPTPLPEVEEEAPVIDANRSQEEGLQTIALSSDDEQAPEDDDEDFLAALNLESETRIEKSRAEKIKRSSLKKVDSLKKAFSRQNIEKKMNKISTKIVSQEQREKIKKSLTPNHQKNPSAKNSSFKVSPLTFSIKKNRSGDAEVEGETSAQAESAVASIELAPIESPTEDLSFKEVHSQLAPGQEEVKAAVEAMEKEVVPGILNGTAEVELSITEDVSEEYALSATLPQDTSKIEVCHNALQEEDKEEEEKENIQIEGSSLAEAAGQAEGVAVGQAS", "length": 474 }, "evidence": [ { "id": "I3LDR9", "url": "https://omabrowser.org/oma/group/I3LDR9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F6PXE3-1", "protein_name": "Caveolae associated protein 2", "gene_name": "CAVIN2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQPEKAASSSPVPSSTPSPSLHLGSTEEAIRDNSQVNAVTVLTLLDKLVNMLDAVQENQHKMEQRQISLEGSVKGIQNDLTKLSKYQASTSNTVSKLLEKSRKVSAHTRAVKERMERQSAQVKRLENNHAQLLRRNHFKVLIFQEENEIPASVFAKEPVSSPGEEKEGEHADENKSLEETLHTVDLSSDDELPHDEEALEDSAEEKMEESRAERIKRSSLRKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTSNHQKISSGKSSPFKVSPLTFGRKKVREGESPAENETKSEDMPSSEMANDYEESSFAEGLSEASLTSALVEGKSMEGDAGTATSRGSDSAMDSNVDLTIVEDEEEESVVLEQAQQVRYAGDYVLASHEAERSEEEPVQPAVLQVDQTA", "length": 408 }, "evidence": [ { "id": "I3LDR9", "url": "https://omabrowser.org/oma/group/I3LDR9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3IA88-1", "protein_name": "Caveolae-associated protein 2", "gene_name": "Cavin2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGEDAAQAEKFQHPNADMRQEKPSSPSPMPSSTPSPSLNLGSTDEAIRDNSQVNAVTVHTLLDKLVNMLDTVRENQHNMEQRQINLEGSVKGIQNDLTKLSKYQASTSNTVNKLLEKSRKVSAHTRAVRERLERQCVQVKRLENNHAQLLRRNHFKVLIFQEESEIPASVFVKEPVPGPAEGKEELAEENKSLEDTLHNVDLSSDDELPGDEEALEDSAEEKVGESRAEKIKRSSLRKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTPNHQKASSGKSSPFKVSPLSFGRKKVQEGESSAENDPKLEDQMQNDREEGSFTEGLSEASLPSGLAEGSAEDAEKPALKGNNSGVGSNADLTIMEDEEDDSADLQQVSYESGYMLNAEEMEGSSEKQVQPAVLHVDQTA", "length": 415 }, "evidence": [ { "id": "I3LDR9", "url": "https://omabrowser.org/oma/group/I3LDR9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O95810-1", "protein_name": "Caveolae-associated protein 2", "gene_name": "CAVIN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGEDAAQAEKFQHPGSDMRQEKPSSPSPMPSSTPSPSLNLGNTEEAIRDNSQVNAVTVLTLLDKLVNMLDAVQENQHKMEQRQISLEGSVKGIQNDLTKLSKYQASTSNTVSKLLEKSRKVSAHTRAVKERMDRQCAQVKRLENNHAQLLRRNHFKVLIFQEENEIPASVFVKQPVSGAVEGKEELPDENKSLEETLHTVDLSSDDDLPHDEEALEDSAEEKVEESRAEKIKRSSLKKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTSNHQKISSGKSSPFKVSPLTFGRKKVREGESHAENETKSEDLPSSEQMPNDQEEESFAEGHSEASLASALVEGEIAEEAAEKATSRGSNSGMDSNIDLTIVEDEEEESVALEQAQKVRYEGSYALTSEEAERSDGDPVQPAVLQVHQTS", "length": 425 }, "evidence": [ { "id": "I3LDR9", "url": "https://omabrowser.org/oma/group/I3LDR9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q63918-1", "protein_name": "Caveolae-associated protein 2", "gene_name": "Cavin2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGEDAAQAEKFQHPNTDMLQEKPSSPSPMPSSTPSPSLNLGSTEEAIRDNSQVNAVTVHTLLDKLVNMLDAVRENQHNMEQRQINLEGSVKGIQNDLTKLSKYQASTSNTVSKLLEKSRKVSAHTRAVRERLERQCVQVKRLENNHAQLLRRNHFKVLIFQEESEIPASVFVKEPVPSAAEGKEELADENKSLEETLHNVDLSSDDELPRDEEALEDSAEEKMEESRAEKIKRSSLKKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTPNHQKASSGKSSPFKVSPLSFGRKKVREGESSVENETKLEDQMQEDREEGSFTEGLSEASLPSGLMEGSAEDAEKSARRGNNSAVGSNADLTIEEDEEEEPVALQQAQQVRYESGYMLNSEEMEEPSEKQVQPAVLHVDQTA", "length": 418 }, "evidence": [ { "id": "I3LDR9", "url": "https://omabrowser.org/oma/group/I3LDR9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q66H98-1", "protein_name": "Caveolae-associated protein 2", "gene_name": "Cavin2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEDAAQAEKFQHPNTDMLQEKPSNPSPMPSSTPSPSLNLGSTEEAIRDNSQVNAVTVHTLLDKLVNMLDAVRENQHNMEQRQINLEGSVKGIQNDLTKLSKYQASTSNTVSKLLEKSRKVSAHTRAVRERLEKQCVQVKRLENNHAQLLRRNHFKVLIFQEESEIPASVFVKEPVPSTAEGKELADENKSLEETLHNVDLSSDDELPGDEEALEDSAEEKMEESRAEKIKRSSLKKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLTPNHQKASSGKSSPFKVSPLSFGRKKIREGESSAENETKLEEQVQDDHEEGSFTEGLSEASLPSGLLEGSAEDAEKSALRGNNSGVGSNADLTIEEDEEEESVALQQAQQVRYESGYMLNSKEMEESSEKHVQAAVLHVDQTA", "length": 417 }, "evidence": [ { "id": "I3LDR9", "url": "https://omabrowser.org/oma/group/I3LDR9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "pmid": "" }, { "name": "caveola", "id": "GO:0005901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005901", "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein kinase C binding", "id": "GO:0005080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005080", "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "pmid": "" }, { "name": "phosphatidylserine binding", "id": "GO:0001786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001786", "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "plasma membrane tubulation", "id": "GO:0097320", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097320", "evidence": [ { "database": "UniProtKB", "id": "I3LDR9", "url": "https://www.uniprot.org/uniprotkb/I3LDR9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 190, "end_pos": 192, "annotation": "n_glycosylation_sequon" }, { "start_pos": 311, "end_pos": 313, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LDR9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 424, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LDR9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LDR9" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 33 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 190, "end_pos": 192 }, { "start_pos": 311, "end_pos": 313 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"uniprot_ac": "I3LDS2", "uniprot_id": "I3LDS2_PIG", "mass": { "chemical_mass": 23895.0, "monoisotopic_mass": 23895.0 }, "refseq": { "ac": "NP_001230757", "name": "TMF-regulated nuclear protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230757" }, "gene_names": [ { "name": "TRNP1", "type": "recommended", "evidence": [ { "id": "I3LDS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDS2" } ] }, { "name": "TRNP1", "type": "synonym", "evidence": [ { "id": "NP_001230757", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230757" } ] } ], "protein_names": [ { "name": "TMF-regulated nuclear protein 1", "type": "synonym", "evidence": [ { "id": "NP_001230757", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230757" } ] }, { "name": "TMF1 regulated nuclear protein 1", "type": "synonym", "evidence": [ { "id": "I3LDS2", "database": "UniProtKB", "url": 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"glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDS2", "url": "https://www.uniprot.org/uniprotkb/I3LDS2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511386", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511386", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K0Y1-1", "protein_name": "TMF1-regulated nuclear protein 1", "gene_name": "Trnp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPGCRISACGPGAQEGTAEPGSPPPPPREPLPSLQPPSSSPTSTPTSTQSPQLPEAAETPVEGQELQRWRQGASGGSGGASPAGIGGAGAAAGAGGRALELAEARRRLLEVEGRRRLVSELESRVLQLHRVFLAAELRLAHRAESLSRLSGGVAQAELYLAAHGSRLKKGARRGRRGRPPALLASALGLGSCVPWGAGRLRRGQGPEPDSPFRRSPPRGPASPQR", "length": 225 }, "evidence": [ { "id": "I3LDS2", "url": "https://omabrowser.org/oma/group/I3LDS2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q1LW65-1", "protein_name": "TMF1 regulated nuclear protein 1", "gene_name": "TRNP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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{ "id": "R-SSC-73863", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-73863", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LDT1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDT1-1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAVPSSDAARFSCPPNFIATPLASEHTRFSLEALTGPDTELWLIQAPADFTPDCLNGRLVPLSGSQVVKGKLAGKRHRYRVLSSNGSQAGEATLLAPSAEVGGGLTCAPSPQGSLRIFEGPQESLTGTLLQPIPASPPPQIPPGLRPRFCAFGGSSPVTGLGSVLASGKRKKKRHIPEASFPQEALPEHGALEVDTALGSPEMDVGKKKKKQQLHELERRDSLATEPAAEMSEPLGMLFPSTTKKRKKKPKDVEVGMLESEEKMVEPDLVVKTEPLDEAVLSPTKKRRRRQQETEGMEPVEGMIVESQLQVKMEPQEEAIPLPSSKKKKKEKGYKVMREPGTEALEPETKPLEVPGEMLEPELLAPQAEATLACTKKRRKKEKRQDAMMEPATEVVEPKEEAVEPKEEVVEPELPGAVEPQADLTSAKKKKKKKERERRMTEPGTEMITPHGEMMEAELPVEGEPEARPDPASTKKRKKRGQESRVLETASQSCC", "length": 496, "header": "tr|I3LDT1-1|I3LDT1_PIG Isoform 1 of DNA-directed RNA polymerase I subunit RPA34 OS=Sus scrofa OX=9823 GN=POLR1G PE=3 SV=2 CANONICAL=I3LDT1-1" }, "isoforms": [ { "isoform_ac": "I3LDT1-1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1/entry#I3LDT1-1", "sequence": { "sequence": "MAAVPSSDAARFSCPPNFIATPLASEHTRFSLEALTGPDTELWLIQAPADFTPDCLNGRLVPLSGSQVVKGKLAGKRHRYRVLSSNGSQAGEATLLAPSAEVGGGLTCAPSPQGSLRIFEGPQESLTGTLLQPIPASPPPQIPPGLRPRFCAFGGSSPVTGLGSVLASGKRKKKRHIPEASFPQEALPEHGALEVDTALGSPEMDVGKKKKKQQLHELERRDSLATEPAAEMSEPLGMLFPSTTKKRKKKPKDVEVGMLESEEKMVEPDLVVKTEPLDEAVLSPTKKRRRRQQETEGMEPVEGMIVESQLQVKMEPQEEAIPLPSSKKKKKEKGYKVMREPGTEALEPETKPLEVPGEMLEPELLAPQAEATLACTKKRRKKEKRQDAMMEPATEVVEPKEEAVEPKEEVVEPELPGAVEPQADLTSAKKKKKKKERERRMTEPGTEMITPHGEMMEAELPVEGEPEARPDPASTKKRKKRGQESRVLETASQSCC", "length": 496, "header": "tr|I3LDT1-1|I3LDT1_PIG Isoform 1 of DNA-directed RNA polymerase I subunit RPA34 OS=Sus scrofa OX=9823 GN=POLR1G PE=3 SV=2 CANONICAL=I3LDT1-1" }, "locus": { "chromosome": "6", "start_pos": 51783410, "end_pos": 51781398, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064697.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064697.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057917.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057917.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDT1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5250924", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5250924", "resource": "Reactome", "description": "B-WICH complex positively regulates rRNA expression" }, { "id": "R-SSC-73762", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-73762", "resource": "Reactome", "description": "RNA Polymerase I Transcription Initiation" }, { "id": "R-SSC-73772", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-73772", "resource": "Reactome", "description": "RNA Polymerase I Promoter Escape" }, { "id": "R-SSC-73863", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-73863", "resource": "Reactome", "description": "RNA Polymerase I Transcription Termination" } ], "orthologs": [ { "uniprot_canonical_ac": "D4ADE7-1", "protein_name": "DNA-directed RNA polymerase I subunit RPA34", "gene_name": "Polr1g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGTSACGATRFSCPPHFTAMSPDSDPPRFSLEALTGPDTEVWLIRAPADFAPQCLNGRRVPLSGSKTVKGKLDGKKHRYRVVTSGPQAGEATLLMSSMEAGGRLACAPAPNGSLRIMEGPQEYLISRVPLQPIPTSLPPQIPAGLRPRFSAFGGSPPVTGPGSASVLRSPTSGKRKKKRKDAEASDTQEAVNRHEAMKVETAWGDLGMDVKKKRKRHHVDEEAEAKGMEPLAELAELPVPSATGSKKRKKSKGAETLQAEEDPGHMEPVAQTEPPEGPFLSPTKKRKRQKQAEGAEEVDGTMADSQPQVTVEPHEETILLSPTKKRKKEKRQNLVMEAEMGLPGVLMETELLEPGLQAEVAPVSPKKTKKKKKGKCVDEALALAAEVTEAALPADFEPQGAPVPSKKKERGQKATEPGSEVTDPRQSEEPEPRAGQGSPKKKKKKDQESRVQNTIPH", "length": 458 }, "evidence": [ { "id": "I3LDT1", "url": "https://omabrowser.org/oma/group/I3LDT1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O15446-1", "protein_name": "DNA-directed RNA polymerase I subunit RPA34", "gene_name": "POLR1G", "tax_id": 9606, "organism": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0001650", "evidence": [ { "database": "UniProtKB", "id": "I3LDT1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1" } ], "pmid": "" }, { "name": "RNA polymerase I complex", "id": "GO:0005736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005736", "evidence": [ { "database": "UniProtKB", "id": "I3LDT1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "transcription elongation by RNA polymerase I", "id": "GO:0006362", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006362", "evidence": [ { "database": "UniProtKB", "id": "I3LDT1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1" } ], "pmid": "" }, { "name": "transcription initiation at RNA polymerase I promoter", "id": "GO:0006361", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006361", "evidence": [ { "database": "UniProtKB", "id": "I3LDT1", "url": "https://www.uniprot.org/uniprotkb/I3LDT1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 86, "end_pos": 88, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 86, "end_pos": 88 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"MHMNKNKLILLLGMIFLGQNKSATLALPKVPTCGQSRMKVQPLSHLSIFSRIVGGNQVEKGAYPWQVSLKRRQKHVCGGTIISPRWVITAAHCVANRNIASTFNVTAGEYDLSYVEPGEQTLTIETIIIHPHFSTKKPMDYDIALLKMAGAFHFDQFVGPMCLPEPGERFAPGFICTTAGWGRLNEDGIAPQVLQEVDLPILTQDECITALLTLQKPISGQTFLCTGFPEGGRDACQGDSGGSLMCRNKKGTWTLAGVTSWGLGCGRGWRKNLQKDDQGSPGIFTDLTKVLPWIHRHIQIGKRRKSYRASCGEQDRVIRASEGELHFPESPFLYYQRKQLCVWTLVVPEGMHLLLTFADFDAESCPHSYLSVYSLEDVLVGRFCGEILTSSVLIGSNTIRLSFISDTTDDAAGFNLTYKALNPNYLPDSGCGSLTILFEEGLIQSLHYPRDYSNMASCHWIFQAPKHYLVKLSFQNLEIEESGDCTSDYVSSHADVERKEEIARLCGFVLPAPVVSPSQVMSITFQSDETSTFRGFQAAVSFIPETVYSDFSISGLEKESVFLETW", "length": 566, "header": "tr|I3LDT6-1|I3LDT6_PIG Isoform 1 of Ovochymase 2 OS=Sus scrofa OX=9823 GN=OVCH2 PE=4 SV=3 CANONICAL=I3LDT6-1" }, "isoforms": [ { "isoform_ac": "I3LDT6-1", "url": "https://www.uniprot.org/uniprotkb/I3LDT6/entry#I3LDT6-1", "sequence": { "sequence": "MHMNKNKLILLLGMIFLGQNKSATLALPKVPTCGQSRMKVQPLSHLSIFSRIVGGNQVEKGAYPWQVSLKRRQKHVCGGTIISPRWVITAAHCVANRNIASTFNVTAGEYDLSYVEPGEQTLTIETIIIHPHFSTKKPMDYDIALLKMAGAFHFDQFVGPMCLPEPGERFAPGFICTTAGWGRLNEDGIAPQVLQEVDLPILTQDECITALLTLQKPISGQTFLCTGFPEGGRDACQGDSGGSLMCRNKKGTWTLAGVTSWGLGCGRGWRKNLQKDDQGSPGIFTDLTKVLPWIHRHIQIGKRRKSYRASCGEQDRVIRASEGELHFPESPFLYYQRKQLCVWTLVVPEGMHLLLTFADFDAESCPHSYLSVYSLEDVLVGRFCGEILTSSVLIGSNTIRLSFISDTTDDAAGFNLTYKALNPNYLPDSGCGSLTILFEEGLIQSLHYPRDYSNMASCHWIFQAPKHYLVKLSFQNLEIEESGDCTSDYVSSHADVERKEEIARLCGFVLPAPVVSPSQVMSITFQSDETSTFRGFQAAVSFIPETVYSDFSISGLEKESVFLETW", "length": 566, "header": "tr|I3LDT6-1|I3LDT6_PIG Isoform 1 of Ovochymase 2 OS=Sus scrofa OX=9823 GN=OVCH2 PE=4 SV=3 CANONICAL=I3LDT6-1" }, "locus": { "chromosome": "9", "start_pos": 1951889, "end_pos": 1936953, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032189.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032189.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022221.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022221.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDT6", "url": "https://www.uniprot.org/uniprotkb/I3LDT6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "I3LDT6", "url": "https://www.uniprot.org/uniprotkb/I3LDT6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3LDT6", "url": "https://www.uniprot.org/uniprotkb/I3LDT6" } ], "pmid": "" }, { "name": "fertilization", "id": "GO:0009566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009566", "evidence": [ { "database": "UniProtKB", "id": "I3LDT6", "url": "https://www.uniprot.org/uniprotkb/I3LDT6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": 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] }, { "uniprot_canonical_ac": "I3LDU2-1", "uniprot_ac": "I3LDU2", "uniprot_id": "I3LDU2_PIG", "mass": { "chemical_mass": 42348.0, "monoisotopic_mass": 42348.0 }, "refseq": { "ac": "XP_020949762", "name": "glucose-fructose oxidoreductase domain-containing protein 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949762" }, "gene_names": [ { "name": "GFOD2", "type": "recommended", "evidence": [ { "id": "I3LDU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" } ] }, { "name": "GFOD2", "type": "synonym", "evidence": [ { "id": "XP_020949762", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949762" } ] } ], "protein_names": [ { "name": "Glucose-fructose oxidoreductase domain-containing protein 2", "type": "recommended", "evidence": [ { "id": "I3LDU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU2/entry#names_and_taxonomy" } ] }, { "name": "glucose-fructose oxidoreductase domain-containing protein 2", "type": "synonym", "evidence": [ { "id": "XP_020949762", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949762" } ] } ], "function": [ { "annotation": "Promotes matrix assembly.", "evidence": [ { "database": "UniProtKB", "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2#function" }, { "database": "UniProtKB", "id": "ARBA00037474", "url": "https://www.uniprot.org/uniprotkb/ARBA00037474#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GFOD2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2", "locus": { "chromosome": "6", "start_pos": 28293967, "end_pos": 28348161, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024750", "url": "https://www.ensembl.org/id/ENSSSCG00000024750" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024750", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024750", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100623376", "url": "https://www.ncbi.nlm.nih.gov/gene/100623376", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000683", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000683", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050463", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050463", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055170", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055170", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623376", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623376", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YVGEIQV", "url": "https://omabrowser.org/oma/group/YVGEIQV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LDU2", "url": "https://www.orthodb.org/?gene=I3LDU2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43818", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43818", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43818:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43818:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01408", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01408", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22725", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22725", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020949762", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020949762", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDU2-1", "url": "https://www.uniprot.org/uniprotkb/I3LDU2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKMLPGVGVFGTGSSARVLVPLLRAEGFTVEALWGKTEEEAKQLAEEMNITFYTSRTDDVLLHQDVDLVCINIPPPLTRQISVKALGIGKNVVCEKAATSVDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLIAEHYVGAVMICDARVYSGSLLSPNYGWICDELMGGGGLHTMGTYIVDLLTHLTGRRAEKVHGLLKTFVRQNAAIRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSATQEELLLRDSLAVGTELPEQGPQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDHTPVSMAASFEDGLYMQSVVDAIKRSSRSGEWEAVEVLTEEPDANQNLCEALQRNNL", "length": 385, "header": "tr|I3LDU2-1|I3LDU2_PIG Isoform 1 of Glucose-fructose oxidoreductase domain-containing protein 2 OS=Sus scrofa OX=9823 GN=GFOD2 PE=3 SV=2 CANONICAL=I3LDU2-1" }, "isoforms": [ { "isoform_ac": "I3LDU2-1", "url": "https://www.uniprot.org/uniprotkb/I3LDU2/entry#I3LDU2-1", "sequence": { "sequence": "MKMLPGVGVFGTGSSARVLVPLLRAEGFTVEALWGKTEEEAKQLAEEMNITFYTSRTDDVLLHQDVDLVCINIPPPLTRQISVKALGIGKNVVCEKAATSVDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLIAEHYVGAVMICDARVYSGSLLSPNYGWICDELMGGGGLHTMGTYIVDLLTHLTGRRAEKVHGLLKTFVRQNAAIRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSATQEELLLRDSLAVGTELPEQGPQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDHTPVSMAASFEDGLYMQSVVDAIKRSSRSGEWEAVEVLTEEPDANQNLCEALQRNNL", "length": 385, "header": "tr|I3LDU2-1|I3LDU2_PIG Isoform 1 of Glucose-fructose oxidoreductase domain-containing protein 2 OS=Sus scrofa OX=9823 GN=GFOD2 PE=3 SV=2 CANONICAL=I3LDU2-1" }, "locus": { "chromosome": "6", "start_pos": 28312167, "end_pos": 28294619, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026185.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026185.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022227.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022227.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623376", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623376", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B1WBV3-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 2", "gene_name": "Gfod2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRCPPATPPLRTRDPCSLETRRRVPGIGALDSGARARIRSILPQGRRTASETRPDPWFRVRLWAGNAIMPGIGKNVVCEKAATSVDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLIAEHYVGAVMICDARIYSGSLLSSSYGWICDELMGGGGLHTMGTYIVDLLTHLTGQKAEKVHGLLKTFVRQNATIRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSAAQEELLVRDSLAVGAGLPEQGPQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDRTPVSMAASFEDGLYMQSVVDAIKRSSRSGEWETVELLTEEPDANQNLSETLQRNNL", "length": 369 }, "evidence": [ { "id": "I3LDU2", "url": "https://omabrowser.org/oma/group/I3LDU2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1R1S8-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 2", "gene_name": "gfod2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPGVGVFGTGQTVRALVPLLQKEGFPVQAVWGRTQEEAESLASELDIPFSTSQTDDVLLHPEVHLVCILTPPPHTRQIAVKALGIGKNVISEQAATLTDACKMVTAARYYPQLMSIMGNSLRFLPAFVHMKRLLGEGYCGSLQVCEARVYGGSLLSQSYGWAWEELMGGGGLHTVGSCIIDLLSHLTGCRAVRVHGMLRTFVRQGGPAGGIRSVTADDYACFQLLMSGGAVCSVTLNFNLPGTDVHEIMLVGSSGRLVARGTELFGQRINMQAEELLLSDGGEATGPSVRGLNSMVTQLRLSFQAQEDRRSWARHPVSMAASFEDGLYVQTVVDAIKRSNRTGEWESVEVKIQEVDPNHNHRTLPN", "length": 367 }, "evidence": [ { "id": "I3LDU2", "url": "https://omabrowser.org/oma/group/I3LDU2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3HZN3-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 2", "gene_name": "Gfod2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKLLPGVGVFGTGSSARVLVPLLRAEGFTVEALWGKTEEEAKQLAEEMNITFYTSRTDDVLLHQDVDLVCINIPPPLTRQISVKALGIGKNVVCEKAATSVDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLIAEHYVGAVMICDARIYSGSLLSPSYGWICDELMGGGGLHTMGTYIVDLLTHVTGRKAEKVHGLLKTFVRQNATIRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSATQEELLVRDSLAVGAGLPEQGLQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDRTPVSMAASFEDGLYMQSVVDAIKRSSRSGEWETVEMLTEEPDANQNLCEALQRNNL", "length": 385 }, "evidence": [ { "id": "I3LDU2", "url": "https://omabrowser.org/oma/group/I3LDU2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3B7J2-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 2", "gene_name": "GFOD2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKMLPGVGVFGTGSSARVLVPLLRAEGFTVEALWGKTEEEAKQLAEEMNIAFYTSRTDDILLHQDVDLVCISIPPPLTRQISVKALGIGKNVVCEKAATSVDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLISEHYVGAVMICDARIYSGSLLSPSYGWICDELMGGGGLHTMGTYIVDLLTHLTGRRAEKVHGLLKTFVRQNAAIRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSATQEELLLRDSLAVGAGLPEQGPQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDRTPVSMAASFEDGLYMQSVVDAIKRSSRSGEWEAVEVLTEEPDTNQNLCEALQRNNL", "length": 385 }, "evidence": [ { "id": "I3LDU2", "url": "https://omabrowser.org/oma/group/I3LDU2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5BIP5-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 2", "gene_name": "GFOD2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKMLPGVGVFGTGSSARVLVPLLRAEGFTVQALWGKTEEEAKQLAEEMNIAFYTSRTDDVLLHQDVDLVCINMPPPLTRQISVKALGIGKNVVCEKAATSVDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLIAEHYVGAVMICDARVYSGSLLSPNYGWICDELMGGGGLHTMGTYIVDLLTHLTGQRAEKVHGLLKTFVRQNAAIRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSAPQEELLLRDSLAVGAGLPEQGAQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDHTPVSMAASFEDGLYMQSVVDAIKRSSRSGEWEAVEVLAEEPDANQNLCEALQRNNL", "length": 385 }, "evidence": [ { "id": "I3LDU2", "url": "https://omabrowser.org/oma/group/I3LDU2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9CYH5-1", "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 2", "gene_name": "Gfod2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLLPGVGVFGTGSSARVLVPLLRAEGFTVEALWGKTEEEAKQLAEEMNITFYTSRTDDVLLHQDVDLVCINIPPPLTRQISVKALGIGKNVVCEKAATSMDAFRMVTASRYYPQLMSLVGNVLRFLPAFVRMKQLIAEHYVGAVMICDARIYSGSLLSPSYGWICDELMGGGGLHTMGTYIVDLLTHLTGQKAEKVHGLLKTFVRQNATIRGIRHVTSDDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSAAQEELLVRDSLAVGAGLPEQGPQDVPLLYLKGMVYMVQALRQSFQGQGDRRTWDRTPVSMAASFEDGLYMQSVVDAIKRSSRSGEWETVEMLAEEPDANQNLSETLQRNNL", "length": 385 }, "evidence": [ { "id": "I3LDU2", "url": "https://omabrowser.org/oma/group/I3LDU2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "extracellular matrix organization", "id": "GO:0030198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030198", "evidence": [ { "database": "UniProtKB", "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "nucleotide binding", "id": "GO:0000166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000166", "evidence": [ { "database": "UniProtKB", "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "I3LDU2", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LDU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" }, { "id": "PF22725", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22725" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GFO/IDH/MocA-like oxidoreductase", "eco_id": "ECO_0000259", "start_pos": 130, "end_pos": 260, "start_aa": "Phe", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LDU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU2" }, { "id": "PF01408", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01408" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Gfo/Idh/MocA-like oxidoreductase N-terminal", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 109, "start_aa": "Val", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 49, "end_pos": 51 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LDU9-1", "uniprot_ac": "I3LDU9", "uniprot_id": "I3LDU9_PIG", "mass": { "chemical_mass": 58107.0, "monoisotopic_mass": 58107.0 }, "refseq": {}, "gene_names": [ { "name": "SNTB2", "type": "recommended", "evidence": [ { "id": "I3LDU9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU9" } ] } ], "protein_names": [ { "name": "Beta-2-syntrophin", "type": "recommended", "evidence": [ { "id": "I3LDU9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU9/entry#names_and_taxonomy" } ] }, { "name": "59 kDa dystrophin-associated protein A1 basic component 2", "type": "synonym", "evidence": [ { "id": "I3LDU9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU9/entry#names_and_taxonomy" } ] }, { "name": "Syntrophin-3", "type": "synonym", "evidence": [ { "id": "I3LDU9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU9/entry#names_and_taxonomy" } ] }, { "name": "Syntrophin-like", "type": "synonym", "evidence": [ { "id": "I3LDU9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDU9/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Adapter protein that binds to and probably organizes the subcellular localization of a variety of membrane proteins. May link various receptors to the actin cytoskeleton and the dystrophin glycoprotein complex. May play a role in the regulation of secretory granules via its interaction with PTPRN.", "evidence": [ { "database": "UniProtKB", "id": "I3LDU9", "url": "https://www.uniprot.org/uniprotkb/I3LDU9#function" }, { "database": "UniProtKB", "id": "ARBA00054805", "url": "https://www.uniprot.org/uniprotkb/ARBA00054805#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDU9", "url": "https://www.uniprot.org/uniprotkb/I3LDU9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SNTB2", "url": "https://www.uniprot.org/uniprotkb/I3LDU9", "locus": { "chromosome": "6", "start_pos": 17681837, "end_pos": 17774527, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028109", "url": "https://www.ensembl.org/id/ENSSSCG00000028109" } ] } } ], "crossref": [ { "id": "I3LDU9", "url": "https://alphafold.ebi.ac.uk/entry/I3LDU9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028109", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028109", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01258", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01258", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd06801", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06801", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015482", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015482", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041428", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041428", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055108", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055108", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10554", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10554", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10554:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10554:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00595", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00595", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18012", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18012", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23012", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23012", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9913351", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9913351", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LDU9", "url": "https://www.uniprot.org/uniprotkb/I3LDU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDU9-1", "url": "https://www.uniprot.org/uniprotkb/I3LDU9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRVAAPTAAAGAGPAMAVWTRATKAGLVELLLRERWVRVVAELSGESLSLTGDAAAAEPEPALGPAAAAFNGLPNGGGAGDSLPGSPSRGLGPPSPPAPPRGPASEAGASPPVRRVRVVKQEAGGLGISIKGGRENRMPILISKIFPGLAADQSRALRLGDAILSVNGTDLRQATHDQAVQALKRAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGAAPQSPSFSGSEDSGSPKHQNSTKDRKVIPLKMCFAARNLSMPTWKTGELLIELHSPDSRNTLILRCKDTATAHSWFVAIHTNIMALLPQVLAELNAMLGATSTAGGSKEVKHIAWLAEQAKLDGGRQQWRPVLMAVTEKDLLLYDCMPWTRDAWASPCHSYPLVATRLVHSGSGCRSPSLGSDLTFATRTGSRQGIEMHLFRVETHRDLSTWTRILVQGCHAAAELIKEVSLGCTLNGQEVRLTVHYESGFTISRENGGSSSILYRYPFERLKMSADDGIRNLYLDFGGPEGELTMDLHSCPKPIVFVLHTFLSAKVTRMGLLV", "length": 542, "header": "tr|I3LDU9-1|I3LDU9_PIG Isoform 1 of Beta-2-syntrophin OS=Sus scrofa OX=9823 GN=SNTB2 PE=1 SV=3 CANONICAL=I3LDU9-1" }, "isoforms": [ { "isoform_ac": "I3LDU9-1", "url": "https://www.uniprot.org/uniprotkb/I3LDU9/entry#I3LDU9-1", "sequence": { "sequence": "MRVAAPTAAAGAGPAMAVWTRATKAGLVELLLRERWVRVVAELSGESLSLTGDAAAAEPEPALGPAAAAFNGLPNGGGAGDSLPGSPSRGLGPPSPPAPPRGPASEAGASPPVRRVRVVKQEAGGLGISIKGGRENRMPILISKIFPGLAADQSRALRLGDAILSVNGTDLRQATHDQAVQALKRAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGAAPQSPSFSGSEDSGSPKHQNSTKDRKVIPLKMCFAARNLSMPTWKTGELLIELHSPDSRNTLILRCKDTATAHSWFVAIHTNIMALLPQVLAELNAMLGATSTAGGSKEVKHIAWLAEQAKLDGGRQQWRPVLMAVTEKDLLLYDCMPWTRDAWASPCHSYPLVATRLVHSGSGCRSPSLGSDLTFATRTGSRQGIEMHLFRVETHRDLSTWTRILVQGCHAAAELIKEVSLGCTLNGQEVRLTVHYESGFTISRENGGSSSILYRYPFERLKMSADDGIRNLYLDFGGPEGELTMDLHSCPKPIVFVLHTFLSAKVTRMGLLV", "length": 542, "header": "tr|I3LDU9-1|I3LDU9_PIG Isoform 1 of Beta-2-syntrophin OS=Sus scrofa OX=9823 GN=SNTB2 PE=1 SV=3 CANONICAL=I3LDU9-1" }, "locus": { "chromosome": "6", "start_pos": 17774496, "end_pos": 17681899, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025739.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025739.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022234.3", "url": 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"SECVEMN", "url": "https://omabrowser.org/oma/group/SECVEMN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LE33", "url": "https://www.orthodb.org/?gene=I3LE33", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394:SF58", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394:SF58", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005669952", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669952", 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"MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKNIFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLEDLTDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAFSIIETENSNNMFSPLDLRASFKKVSDSMRTTSLCLERTDVCHEVEPVRTLAEHSYAVSSMAEAYRSQPVREQDSGSPEKTGTENCEAVAAKPKTSRKPKTPSVSQDSDSTPENISPPPASNLEVNQEESPQPVAILSRSKSPNNNEGEVRFPREDENKSSEVPGPPATEVPPLVYNCSCCSKSFDSSTLLSAHMQLHKPTQEPLVCKYCNKQFSTLNRLDRHEQICMRSSHMPVPGGNQRFLENYPTIGQNGSSFTGPESLLSENRMGEFSSPGSTLPETDHMVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTYPCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSISKKTANGGLKPSVYPYKLYRLLPMKCKRAPYKSYRHSSYENTRENSQMNESAPGPYVIQNPHGSELPTLNFQDSVSTLTNSPAIPLETPARQDLPTPASVQNTEGTKWGERGELKVDLDSRFYSAEMSVPSTENTSSSDHRAGEAPTLSASNGSENSASVISYSGSAPSVIVHSSQFSSVIMHSNAITPEMGHKPRAPLDLAVSQTPKEDGRPEPDKMGRGVNRPKSGKEKKKTIPCNRGEIPEEPRYVADPGGSLSKTTNIMKETSKIETYIAKPALPGTSTNSNVAPLCQITVKIGNEAIVKRHILGSKLFYKRGRRSKYQVQEETLPQESDQETNRASPLGLCQAECMEMSEMFDDASDQDSTDKPWRPYYNYKPKKKSRQLRKMRKANWRKEHENRSPSGKCKYPAELDCAVGKAPQEKPLEEEENKEMPKLQCELCDGDKASGAGNPGRPHRHLTARPYACELCAKPFQSPSTLKMHMRCHTGEKPYQCKTCGRCFSVQGNLQKHMRIHLGVKEFVCQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQSFLYLSTKRNHEQRHVQEHNGKGYACFQCPKICKTAAALGMHQKKHLFKSPSQREKTEGDVGQENSHPLENPHFLDSEDSDQKDNVQTLADNVL", "length": 1197, "header": "tr|I3LE33-1|I3LE33_PIG Isoform 1 of Zinc finger and BTB domain-containing protein 38 OS=Sus scrofa OX=9823 GN=ZBTB38 PE=4 SV=1 CANONICAL=I3LE33-1" }, "isoforms": [ { "isoform_ac": "I3LE33-1", "url": "https://www.uniprot.org/uniprotkb/I3LE33/entry#I3LE33-1", "sequence": { "sequence": "MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKNIFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLEDLTDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAFSIIETENSNNMFSPLDLRASFKKVSDSMRTTSLCLERTDVCHEVEPVRTLAEHSYAVSSMAEAYRSQPVREQDSGSPEKTGTENCEAVAAKPKTSRKPKTPSVSQDSDSTPENISPPPASNLEVNQEESPQPVAILSRSKSPNNNEGEVRFPREDENKSSEVPGPPATEVPPLVYNCSCCSKSFDSSTLLSAHMQLHKPTQEPLVCKYCNKQFSTLNRLDRHEQICMRSSHMPVPGGNQRFLENYPTIGQNGSSFTGPESLLSENRMGEFSSPGSTLPETDHMVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTYPCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSISKKTANGGLKPSVYPYKLYRLLPMKCKRAPYKSYRHSSYENTRENSQMNESAPGPYVIQNPHGSELPTLNFQDSVSTLTNSPAIPLETPARQDLPTPASVQNTEGTKWGERGELKVDLDSRFYSAEMSVPSTENTSSSDHRAGEAPTLSASNGSENSASVISYSGSAPSVIVHSSQFSSVIMHSNAITPEMGHKPRAPLDLAVSQTPKEDGRPEPDKMGRGVNRPKSGKEKKKTIPCNRGEIPEEPRYVADPGGSLSKTTNIMKETSKIETYIAKPALPGTSTNSNVAPLCQITVKIGNEAIVKRHILGSKLFYKRGRRSKYQVQEETLPQESDQETNRASPLGLCQAECMEMSEMFDDASDQDSTDKPWRPYYNYKPKKKSRQLRKMRKANWRKEHENRSPSGKCKYPAELDCAVGKAPQEKPLEEEENKEMPKLQCELCDGDKASGAGNPGRPHRHLTARPYACELCAKPFQSPSTLKMHMRCHTGEKPYQCKTCGRCFSVQGNLQKHMRIHLGVKEFVCQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQSFLYLSTKRNHEQRHVQEHNGKGYACFQCPKICKTAAALGMHQKKHLFKSPSQREKTEGDVGQENSHPLENPHFLDSEDSDQKDNVQTLADNVL", "length": 1197, "header": "tr|I3LE33-1|I3LE33_PIG Isoform 1 of Zinc finger and BTB domain-containing protein 38 OS=Sus scrofa OX=9823 GN=ZBTB38 PE=4 SV=1 CANONICAL=I3LE33-1" }, "locus": { "chromosome": "13", "start_pos": 82192329, "end_pos": 82188739, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060641.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060641.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055360.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055360.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 644, "start_aa": "Thr", "end_pos": 644, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr644", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LA71-1", "protein_name": "Zinc finger and BTB domain-containing protein 38", "gene_name": "Zbtb38", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKNIFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLEDLSDRNFSNSPGPYVVCITEKGVVKEEKNEKRHEEPAITNGPRITNAFSIIETENSNNMFSPLDLRASFKKVSDSMRTTSLCQERTNVCHEAEPVRTLAEHSYAVSSITEAYRNQPVREHDSSLSGKTGKENGEALVTKVKPCRKPKTQSQESDSTPEKTPLLPVTSPEVNQEKSPQPAPILSQSEPPSKEGDVHFTREEENQPSDDIPGPTAAEVPPLVYNCSCCSKSFDSSILLSAHMQLHKPTQEPFVCKYCNKQFTTLNRLDRHEHICMRSSHVPIPGGNQQFLENYPTIGQNGSSFPNPESLVPENNIGELSSAGSALPDADHIVKFVNGQMLYSCIVCKRSYVTLSSLRRHANVHSWRRTYPCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSISKKTANGGLKPNVYPYKLYRLLPMRCKRAPYKSFRNSSYESSRENSQRSESAPDTFVVPNSQSSEMPTLNFQDGRNTLTSIPAIPVETPAHQGTLTSAKVKNAEGTKWKKEALKTGLVNNFDSTEASVSSTVRANLQAEPTHGATMGGGSEQSASVISYSGSVPSVIVHSSQFSSVIKHSNTFAALTSSNDKAPSQPVISPSLKEDSKPEADKASKLASRPKSIKEKKKAIPCNRGEITEEAKHVADPGGSLGKTTNAVEETSKIETYIAKPALPGTSTNSNVAPLCQITVKIGNEAIVKRHILGSKLFYKRGRKPKYQIQEESLPQESDPETHGDSPLGLCQAECVEMSEAFDDASDQDSTDKPWRPYYNYKPKKKSKQLRKMRKVKWRKEHGVRSPSGRCRYPAELDRAEVKPPPDKAFEEEENKEMPKLQCELCDGDKAGGMEAEGKPHQHLTLKPYICELCAKQFQSPSTLKMHMRCHTGEKPYQCKTCGRCFSVQGNLQKHERIHLGVKEFICQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQGFLYLSTKRNHERRHVREHDGKGFACFQCPKICKTAAALRMHQKKHLFKTLTKQEKTDDMCHENSDLLESQLCTDSEDSDQKDDIQTFAKSVQ", "length": 1190 }, "evidence": [ { "id": "I3LE33", "url": "https://omabrowser.org/oma/group/I3LE33/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0ZSI2-1", "protein_name": "Zinc finger and BTB domain-containing protein 38", "gene_name": "ZBTB38", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTVMSHSKDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKNIFWSRTICISGHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLEDLTDANFSSSPCPYAYCVSEKGTVKEEKHEKRHEDSAVTNGPRITNAFSIFETENSLFSPLDLRANFKKVSETVQTPSVSLDRNNTCKDAEPASTLAEHSYAVSSGGDTFQGTPHFEQESSSSYNAGEDHYENLRATPLIQPVKQACSTTPKAAFKSQGTGLAVAKVPASTVANAEAQPETVNDQRIISIPKPQNKAGDFHLSREEENTSANISGSVTTAVTPAYSCNCCAKSFSDRALLSTHLQLHSEHQETFICKYCSKQFANLNILESHEQVCMRSSSLSVHSGNEQNFSDNYTATDGRNESSYANTEPLLSENSITDYSNANCALPETDHLVKVVDGQILYTCIVCKRSYVTLSSLRRHANVHSWRRTYPCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSVSKKTANGGLKPSVYPYKLYRLLPMKCRRLPYKSYRNSTYENVQTSSQVNETASSNCFIQSSISAELPPLNFQTNILTNNRTLVLDTSSCNDTASSTNPQNSSSWGVGILNSDLQRDFFTADKRVPTATKDSGSHEYDSSVVSLTNVNENSTSVISYSSSAPSVIMHSSRVSSVIMHSKTITSVENSKTESSNSVPSQPVSDDCNYGSDNYGKCITKSKPIKEKKKALLGSRAEAAEDTQHVQGSGGSSSKTTNTAEESSKTETYIAKPALPGTSTDSNVAPLCQITVKIGNEAIVKRHILGSKLFCKRGRKSKHESKQDNLNEESEAEIKEKSPSRLYSSECLELTEMCDDVSDQDSSDKPWRPYYNYKPKKKSKQLRKMKKTKWRKKHGNRNTVTESHSTCSREYALRSAPEDKAVSQEENTEMPSLHCELCEGDQNSTTETQEHVHWHLSSSKPYICELCQKQFQSPSTLKMHMRCHTGEKPFTCKTCGKCFSVPGNLQKHERIHLGVKDFVCQYCNKAFTLNETLKIHERIHTGEKRYHCQFCLQSFLYLSTKRNHEQRHIREHNGKGYACFQCPKICKTAAALGMHQKKHLFKSTGPQDRKEQFCNESAQLLENQHFLGSEGSEGKSIQSVTPEVIL", "length": 1193 }, "evidence": [ { "id": "I3LE33", "url": "https://omabrowser.org/oma/group/I3LE33/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q5EXX3-1", "protein_name": "Zinc finger and BTB domain-containing protein 38", "gene_name": "Zbtb38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKNIFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVRRQETVTDLAAAGKRLGISFLEDLSDRNFSNSPGPYVVCITEKGVVKEEKNEKRHEEPAVTNGPRITNAFSIIETENSNSMFSPLDLRASFKKVSDAMRTTSLCQERASVCPEAEPVRTLAEHSYAVSSITEAYRSQPLREHDSSSSSGKTGKENGEALTTKAKPCRKPKTQTQDSDSTTENMPLPLVTCPEVNQERSPQPAPILSHSEPPSSEGDVHFPREDENQPSETPGPPAAEVPPLVYNCSCCSKSFDSSTLLGAHMQLHKPTQDPFVCKYCNKQFTTLNRLDRHEQICMRSSHMPMPGGNQPFLENYPTIGQDGGSFTSPDSLVPESRIGELSSAGSALSDADHMVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTYPCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSISKKTANGGLKPTVYPYKLYRLLPMRCKRAPYKSYRNSSYESAQGNRQRNESPPDTFVIPNLPSSEMPTLNFQDGRNSLTSSPAIPVETPSWQGTPTSAKVKNAEGLKWRKQALKTDLVDSAEVSISSIGNSVSTTLQAEPVCVSSGEHSASVISYSGLVPSVIVHSSQFSSVIKHSNAIACLANSNHQSPSQPVASPSLIKDSKPEADKASKLASRPKNSKEKKKTVPCNRGEITEEAKYVADLGGSSGKTTNVVEETSKIETYIAKPALPGTSTNSNVAPLCQITVKIGNEAIVKRHILGSKLFYKRGRKPKYQMQEETLPRESDPETRGDSPLGLCQADCVEMSEAFDEVSDQDSTDKPWRPYYNYKPKKKSKQLRKIRKVKWRKERGSRSPVGRRRYPAELDRAEMGRRRYPAELDRCAEVKLPPDKASEEEENKEMPKLQCELCDGDKAAGAGAEGKPHQHLTLKPYICELCAKQFQSSSTLKMHMRCHTGEKPYQCKTCGRRFSVQGNLQKHERIHLGVKEFICQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQGFLYLSTKRNHERRHVREHDGKGFACFQCPKICKTAAALRMHQKKHLFKTLTKQEETDDLCHENSDLLESQPCTDSEDSDQKDDIKKPLLKMSFE", "length": 1203 }, "evidence": [ { "id": "I3LE33", "url": "https://omabrowser.org/oma/group/I3LE33/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8NAP3-1", "protein_name": "Zinc finger and BTB domain-containing protein 38", "gene_name": "ZBTB38", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKNIFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLEDLTDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAFSIIETENSNNMFSPLDLRASFKKVSDSMRTASLCLERTDVCHEAEPVRTLAEHSYAVSSVAEAYRSQPVREHDGSSPGNTGKENCEALAAKPKTCRKPKTFSIPQDSDSATENIPPPPVSNLEVNQERSPQPAAVLTRSKSPNNEGDVHFSREDENQSSDVPGPPAAEVPPLVYNCSCCSKAFDSSTLLSAHMQLHKPTQEPLVCKYCNKQFTTLNRLDRHEQICMRSSHMPIPGGNQRFLENYPTIGQNGGSFTGPEPLLSENRIGEFSSTGSTLPDTDHMVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTYPCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSISKKTANGGLKPSVYPYKLYRLLPMKCKRAPYKSYRNSSYENARENSQMNESAPGTYVVQNPHSSELPTLNFQDTVNTLTNSPAIPLETSACQDIPTSANVQNAEGTKWGEEALKMDLDNNFYSTEVSVSSTENAVSSDLRAGDVPVLSLSNSSENAASVISYSGSAPSVIVHSSQFSSVIMHSNAIAAMTSSNHRAFSDPAVSQSLKDDSKPEPDKVGRFASRPKSIKEKKKTTSHTRGEIPEESNYVADPGGSLSKTTNIAEETSKIETYIAKPALPGTSTNSNVAPLCQITVKIGNEAIVKRHILGSKLFYKRGRRPKYQMQEEPLPQGNDPEPSGDSPLGLCQSECMEMSEVFDDASDQDSTDKPWRPYYNYKPKKKSRQLKKMRKVNWRKEHGNRSPSHKCKYPAELDCAVGKAPQDKPFEEEETKEMPKLQCELCDGDKAVGAGNQGRPHRHLTSRPYACELCAKQFQSPSTLKMHMRCHTGEKPYQCKTCGRCFSVQGNLQKHERIHLGLKEFVCQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQRFLYLSTKRNHEQRHIREHNGKGYACFQCPKICKTAAALGMHQKKHLFKSPSQQEKIGDVCHENSNPLENQHFIGSEDNDQKDNIQTGVENVVL", "length": 1195 }, "evidence": [ { "id": "I3LE33", "url": "https://omabrowser.org/oma/group/I3LE33/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "regulation of DNA replication", "id": "GO:0006275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006275", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LE33", "url": "https://www.uniprot.org/uniprotkb/I3LE33" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", 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"authors" ] } ] }, { "uniprot_canonical_ac": "I3LE95-1", "uniprot_ac": "I3LE95", "uniprot_id": "I3LE95_PIG", "mass": { "chemical_mass": 60913.0, "monoisotopic_mass": 60913.0 }, "refseq": { "ac": "XP_003355657", "name": "mRNA-decapping enzyme 1B isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355657" }, "gene_names": [ { "name": "DCP1B", "type": "recommended", "evidence": [ { "id": "I3LE95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ] }, { "name": "DCP1B", "type": "synonym", "evidence": [ { "id": "XP_003355657", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355657" } ] } ], "protein_names": [ { "name": "5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase", "type": "recommended", "evidence": [ { "id": "I3LE95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE95/entry#names_and_taxonomy" } ] }, { "name": "3.6.1.62", "type": "synonym", "evidence": [ { "id": "I3LE95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE95/entry#names_and_taxonomy" } ] }, { "name": "mRNA-decapping enzyme 1B isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003355657", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355657" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DCP1B", "url": "https://www.uniprot.org/uniprotkb/I3LE95", "locus": { "chromosome": "5", "start_pos": 68923903, "end_pos": 68975957, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023976", "url": "https://www.ensembl.org/id/ENSSSCG00000023976" } ] } } ], "crossref": [ { "id": "I3LE95", "url": "https://alphafold.ebi.ac.uk/entry/I3LE95", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023976", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023976", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09804", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09804", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13182", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13182", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100620800", "url": "https://www.ncbi.nlm.nih.gov/gene/100620800", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "I3LE95", "url": "https://www.ebi.ac.uk/intact/interactors/id:I3LE95*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR010334", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010334", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031953", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031953", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620800", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620800", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IHPVGET", "url": "https://omabrowser.org/oma/group/IHPVGET/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LE95", "url": "https://www.orthodb.org/?gene=I3LE95", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16290", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16290", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16290:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16290:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06058", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06058", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16741", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16741", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-430039", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-430039", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003355657", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355657", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "67484", "url": "https://www.rhea-db.org/rhea/67484", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QG46", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG46-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG46-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE95-1", "url": "https://www.uniprot.org/uniprotkb/I3LE95-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAAGGRAGKGRDISLAALRRHDPYISHIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFLLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQYEQLKAHHGTGAGAAARAGGPTMTLGSGESREVDILRMLTKARDEYTKCKTCSEPKQITSSSAIYNNPNLIKPIPVKPSGNRQQRIPQPSQTLDPEPQHLSLMALFGKQDKAVCQQTVGPPQTPHQQLQQEKGVQQGQQGVVHSMSYEDPRRHSPLVEKQLCPAIQKLMVRSADLHPLSELPENQPCRDGESCTGAAQPGSPCSTLGAPRTQNLLEKLQSSPRTASRCDPAAPAPSSSATTPAAPAPPVPGSQAVGSSEVSPRELLRKLQGAQQEPPVPSRPALAAKFPLATSSARAPNPLESWRDQIPCNEKQAPLLQVLLPQRIPAAVAPSLLMSPMVFTQPPWAPPQERFSGLLPPGSQDPVATPSGLLLPLQTPEPPGTPSSPLTKLQLQEALLHLIQNDDSFLNIIYEAYLFSMTQAAMKKTL", "length": 559, "header": "tr|I3LE95-1|I3LE95_PIG Isoform 1 of 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase OS=Sus scrofa OX=9823 GN=DCP1B PE=3 SV=2 CANONICAL=I3LE95-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QG46-1", "url": "https://www.uniprot.org/uniprotkb/I3LE95/entry#A0A5G2QG46-1", "sequence": { "sequence": "MAAAAGGRAGKGRDISLAALRRHDPYISHIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFLLQDPFLLYRNARFLSQEAAGGIAVLLQDLCW", "length": 124, "header": "tr|A0A5G2QG46-1|A0A5G2QG46_PIG Computationally mapped isoform of 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase OS=Sus scrofa OX=9823 GN=DCP1B PE=3 SV=1 CANONICAL=I3LE95-1" }, "locus": { "chromosome": "5", "start_pos": 68975942, "end_pos": 68967247, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069506.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069506.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061000.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061000.1" } ] } }, { "isoform_ac": "I3LE95-1", "url": "https://www.uniprot.org/uniprotkb/I3LE95/entry#I3LE95-1", "sequence": { "sequence": "MAAAAGGRAGKGRDISLAALRRHDPYISHIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFLLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQYEQLKAHHGTGAGAAARAGGPTMTLGSGESREVDILRMLTKARDEYTKCKTCSEPKQITSSSAIYNNPNLIKPIPVKPSGNRQQRIPQPSQTLDPEPQHLSLMALFGKQDKAVCQQTVGPPQTPHQQLQQEKGVQQGQQGVVHSMSYEDPRRHSPLVEKQLCPAIQKLMVRSADLHPLSELPENQPCRDGESCTGAAQPGSPCSTLGAPRTQNLLEKLQSSPRTASRCDPAAPAPSSSATTPAAPAPPVPGSQAVGSSEVSPRELLRKLQGAQQEPPVPSRPALAAKFPLATSSARAPNPLESWRDQIPCNEKQAPLLQVLLPQRIPAAVAPSLLMSPMVFTQPPWAPPQERFSGLLPPGSQDPVATPSGLLLPLQTPEPPGTPSSPLTKLQLQEALLHLIQNDDSFLNIIYEAYLFSMTQAAMKKTL", "length": 559, "header": "tr|I3LE95-1|I3LE95_PIG Isoform 1 of 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase OS=Sus scrofa OX=9823 GN=DCP1B PE=3 SV=2 CANONICAL=I3LE95-1" }, "locus": { "chromosome": "5", "start_pos": 68975942, "end_pos": 68924082, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028544.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028544.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022381.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022381.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 514, "start_aa": "Thr", "end_pos": 514, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr514", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620800", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620800", "resource": "KEGG Pathway" }, { "id": "R-SSC-430039", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-430039", "resource": "Reactome", "description": "mRNA decay by 5' to 3' exoribonuclease" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2U9U1-1", "protein_name": "5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase", "gene_name": "DCP1B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAVAGAALLGKGLDISLAALQQHDPYISSIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQQEQLKAQQGTGTGVSPMIMNSANNKEVDILRMLTKAKDEYTKCKTCSEPKQITSSSAICNNPNLIKPIPVKPSENQHQRISQQSKNADPEPQHLSLTALFGKQEKTDATEPLTKQHQESLPVRQGVVRSLSYEEPSRHSPCAEKQLCPAIQKLMVRGTDLHPLAEFPENRLCENGNIHPVGETFTGLFQPVTSRGIATSHVVQDAAGTQSLLQKLQSQSGSMTKMDPSATGSVNSTASVFSRTPAAVGAPAAQMSNMTQPPLVYFNGSLPAQTLESQTLGKEQSKLPRQPVSLSGNQTANSGVISPQELLKKLQIVQQEQLHVSSRPTLAAKFPVVTQNTNTLKPLDSWIEKTPGTEKQSSLFQVISPQRIPATVTPTLLMSPMVFTQPTPAAPKANESGLLTASNQEPAASSANLLLPLQTPEPPVINSSSVTKMQLQETLLHLIQNDDNFLNIIYEAYLFSVRKAAMKKSM", "length": 606 }, "evidence": [ { "id": "I3LE95", "url": "https://omabrowser.org/oma/group/I3LE95/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZZJ7-1", "protein_name": "5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase", "gene_name": "Dcp1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAAAGGLPGKGHDISLAALRRHDPYINRIVDVASQVALYTFGHRANEWEKTGVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNGTLSIYGIWFYDKEECQRIAKLMKNLTQCEQLKACHGAGAGSSPVTLSSGEGREVDILQMLTKAKDEYTKCRSCSEPKQMTSSSAICDNPKLIKPVPVRPSSSQRLHEPTPSKTLDPEPQHLPLTALFGKQDKAPCQETVKPSRTFAHHHHHHHHHQQQEKLPVHHGVACSLACEDPRKLSLPVEKQLCPAIQKLMVGSMGLHSLPQHPGQWPCESGSPSPAGGILPGPVQLGAPWNGRAAHCTQSTCRSHKLLEQLQGAPAAVHKYSFCAPASPAVTTQVAPGQSVAQSQLVYFSGPLPPPTPGHQALGKEQCAPPAQAVSLSGSQESSPTVLPTQELLRKLQVVQQEQQAAPRPALAARFPVSAQGSGTEKPLEAWVSKTASMEKQAPLLQSTCAPLRETDNGLMALGGPELPAASSSLLLPLQNWESSTMASRPLTRLQLQEALLNLIQNDDNFLSIIYEAYLFSVTQAAMRKAT", "length": 582 }, "evidence": [ { "id": "I3LE95", "url": "https://omabrowser.org/oma/group/I3LE95/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MLY3-1", "protein_name": "5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase", "gene_name": "DCP1B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVAGGPAGKGRDISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFLLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQYEQLKAHHGTGAGASPVSLGSGEGKEADILRMLTKAKDEYTKCKTCSEPKQISSSSAIHDNPNLIKPIPVKPSGSRQQRGPRPGQTSDPEPQHLSLTALFGKQDKAPCQEATGPPQTLPLQQQQPEKFPMRQGVVRSLSYEEPRRPSPPVDKQLCPAIQKLMVRSMDLQPLAELPESRPCTDALRAACAGPAQTGSPRSHALAAPGTQKLLQVQSIPGAENRCEPGAPAPASSATTPVSLAQPTRLSSALPPQTPGPRALPRPAPPGPGPGHQPVTGPGEVSPRELLRRLQAVQQEQQLPAPGRPALAAKFPTATLSTRARNPLEPWRDPPPSTEQPAPLLQVLSPQRIPAAATPPPLMSPLVFAQPSWAPPQERSRAPLPPGNQDPAATPTGLLLPLRTPEPPGTPGSALSKLQLQEALLHLIQNDDNFLNIIYEAYLFSLTQAAVKKTL", "length": 581 }, "evidence": [ { "id": "I3LE95", "url": "https://omabrowser.org/oma/group/I3LE95/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8IZD4-1", "protein_name": "mRNA-decapping enzyme 1B", "gene_name": "DCP1B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQYEQLKAHQGTGAGISPVILNSGEGKEVDILRMLIKAKDEYTKCKTCSEPKKITSSSAIYDNPNLIKPIPVKPSENQQQRIPQPNQTLDPEPQHLSLTALFGKQDKATCQETVEPPQTLHQQQQQQQQQQEKLPIRQGVVRSLSYEEPRRHSPPIEKQLCPAIQKLMVRSADLHPLSELPENRPCENGSTHSAGEFFTGPVQPGSPHNIGTSRGVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSRAPTSVTPVAPGKGLAQPPQAYFNGSLPPQTVGHQAHGREQSTLPRQTLPISGSQTGSSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVLAQSSGTGKPLESWINKTPNTEQQTPLFQVISPQRIPATAAPSLLMSPMVFAQPTSVPPKERESGLLPVGGQEPPAAATSLLLPIQSPEPSVITSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKTM", "length": 617 }, "evidence": [ { "id": "I3LE95", "url": "https://omabrowser.org/oma/group/I3LE95/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "deadenylation-dependent decapping of nuclear-transcribed mRNA", "id": "GO:0000290", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000290", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" }, { "name": "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay", "id": "GO:0000184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000184", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" }, { "name": "deadenylation-independent decapping of nuclear-transcribed mRNA", "id": "GO:0031087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031087", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" }, { "name": "enzyme activator activity", "id": "GO:0008047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008047", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" }, { "name": "5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity", "id": "GO:0140933", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140933", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" }, { "name": "P-body", "id": "GO:0000932", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000932", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LE95", "url": "https://www.uniprot.org/uniprotkb/I3LE95" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 128, "end_pos": 130, "annotation": "n_glycosylation_sequon" }, { "start_pos": 81, "end_pos": 83, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "67484", "name": "", "equation": "a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA + H2O = N(7)-methyl-GDP + a 5'-end phospho-ribonucleoside in mRNA + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "67484", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/67484" } ] }, { "id": "R-SSC-429860", "name": "DCP1-DCP2 complex decaps mRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [ "R-ALL-430004" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-429860", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-429860" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-430004", "participant_name": "7-MeGDP [cytosol]", "crossref": [ { "id": "HMDB0001107", "database": "HMDB Metabolite", "url": "" }, { "id": "20794", "database": "ChEBI", "url": "" }, { "id": "ZINC000018130229", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LE95-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 559, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LE95-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LE95" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LE95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE95" }, { "id": "PF16741", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16741" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "mRNA-decapping enzyme C-terminal", "eco_id": "ECO_0000259", "start_pos": 517, "end_pos": 557, "start_aa": "Ser", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 514 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 128, "end_pos": 130 }, { "start_pos": 81, "end_pos": 83 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LEE6-1", "uniprot_ac": "I3LEE6", "uniprot_id": "I3LEE6_PIG", "mass": { "chemical_mass": 49991.0, "monoisotopic_mass": 49991.0 }, "refseq": { "ac": "XP_003354522", "name": "procollagen C-endopeptidase enhancer precursor", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354522" }, "gene_names": [ { "name": "PCOLCE", "type": "recommended", "evidence": [ { "id": "I3LEE6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEE6" } ] }, { "name": "PCOLCE", "type": "synonym", "evidence": [ { "id": "XP_003354522", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354522" } ] } ], "protein_names": [ { "name": "Procollagen C-endopeptidase enhancer", "type": "synonym", "evidence": [ { "id": "I3LEE6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEE6/entry#names_and_taxonomy" } ] }, { "name": "procollagen C-endopeptidase enhancer precursor", "type": "synonym", "evidence": [ { "id": "XP_003354522", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354522" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LEE6", "url": "https://www.uniprot.org/uniprotkb/I3LEE6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PCOLCE", "url": "https://www.uniprot.org/uniprotkb/I3LEE6", "locus": { "chromosome": "3", "start_pos": 8528739, "end_pos": 8523449, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027466", "url": "https://www.ensembl.org/id/ENSSSCG00000027466" } ] } } ], "crossref": [ { "id": "ENSSSCG00000027466", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027466", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00041", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00041", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd03576", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03576", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100627524", "url": "https://www.ncbi.nlm.nih.gov/gene/100627524", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000859", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000859", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001134", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001134", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018933", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018933", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035814", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035814", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035914", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035914", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627524", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627524", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GIMKCED", "url": "https://omabrowser.org/oma/group/GIMKCED/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LEE6", "url": "https://www.orthodb.org/?gene=I3LEE6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24251", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24251", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24251:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24251:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00431", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00431", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01759", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01759", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1650814", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1650814", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2243919", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2243919", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003354522", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354522", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LEE6", "url": "https://www.uniprot.org/uniprotkb/I3LEE6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEE6-1", "url": "https://www.uniprot.org/uniprotkb/I3LEE6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLPAATASLLGPLLTAWALLPFAQGQTPNYTRPVFLCGGDVTGESGYLASEGFPNLYPPNKECIWTITVPESQTVSLSFRVFDLELHPSCRYDALEVFAGSGTSGQRLGRFCGTFRPAPLVAPGNQVTLRMTSDEGTGGRGFLLWYSGRATSGTEHQFCGGRLEKAQGTLTTPNWPESDYPPGISCSWHIIAPPDQVISLTFGKFDLEPDSYCRYDSVSVFNGAVSDDAKRLGKFCGDKAPGPISSEGNELLVQFVSDLSVTADGFSASYRTLPRGATEKAPAQSPGEDARPSPPLLGPGPKPGAGPKVKPELPPEEKPKAAPKAEATPAGSDGPSVPCPKQCRRTGTLQSNFCNSNLVVTATVKSMVRGPGEGLTVTVSLIGVYKTGGLDLPSPPTDTSLKFYAPCKQCPPMKKGTSYLMMGQVDENRGPILPPESFVVLYRPNQDQILTNLAKRRCPSQPVQAAESQA", "length": 470, "header": "tr|I3LEE6-1|I3LEE6_PIG Isoform 1 of Procollagen C-endopeptidase enhancer OS=Sus scrofa OX=9823 GN=PCOLCE PE=1 SV=1 CANONICAL=I3LEE6-1" }, "isoforms": [ { "isoform_ac": "I3LEE6-1", "url": "https://www.uniprot.org/uniprotkb/I3LEE6/entry#I3LEE6-1", "sequence": { "sequence": "MLPAATASLLGPLLTAWALLPFAQGQTPNYTRPVFLCGGDVTGESGYLASEGFPNLYPPNKECIWTITVPESQTVSLSFRVFDLELHPSCRYDALEVFAGSGTSGQRLGRFCGTFRPAPLVAPGNQVTLRMTSDEGTGGRGFLLWYSGRATSGTEHQFCGGRLEKAQGTLTTPNWPESDYPPGISCSWHIIAPPDQVISLTFGKFDLEPDSYCRYDSVSVFNGAVSDDAKRLGKFCGDKAPGPISSEGNELLVQFVSDLSVTADGFSASYRTLPRGATEKAPAQSPGEDARPSPPLLGPGPKPGAGPKVKPELPPEEKPKAAPKAEATPAGSDGPSVPCPKQCRRTGTLQSNFCNSNLVVTATVKSMVRGPGEGLTVTVSLIGVYKTGGLDLPSPPTDTSLKFYAPCKQCPPMKKGTSYLMMGQVDENRGPILPPESFVVLYRPNQDQILTNLAKRRCPSQPVQAAESQA", "length": 470, "header": "tr|I3LEE6-1|I3LEE6_PIG Isoform 1 of Procollagen C-endopeptidase enhancer OS=Sus scrofa OX=9823 GN=PCOLCE PE=1 SV=1 CANONICAL=I3LEE6-1" }, "locus": { "chromosome": "3", "start_pos": 8528694, "end_pos": 8523678, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029137.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029137.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022434.1", "url": "https://www.ensembl.org/id/ENSSSCP00000022434.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 328, "start_aa": "Thr", "end_pos": 328, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr328", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LEE6", "url": "https://www.uniprot.org/uniprotkb/I3LEE6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627524", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627524", "resource": "KEGG Pathway" }, { "id": "R-SSC-1650814", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1650814", "resource": "Reactome", "description": "Collagen biosynthesis and modifying enzymes" }, { "id": "R-SSC-2243919", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2243919", "resource": "Reactome", 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LEH8-1", "uniprot_ac": "I3LEH8", "uniprot_id": "I3LEH8_PIG", "mass": { "chemical_mass": 112064.0, "monoisotopic_mass": 112064.0 }, "refseq": { "ac": "XP_003358037", "name": "kinesin-like protein KIF19 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358037" }, "gene_names": [ { "name": "KIF19", "type": "recommended", "evidence": [ { "id": "I3LEH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ] }, { "name": "KIF19", "type": "synonym", "evidence": [ { "id": "XP_003358037", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358037" } ] } ], "protein_names": [ { "name": "Kinesin-like protein KIF19", "type": "recommended", "evidence": [ { "id": "I3LEH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEH8/entry#names_and_taxonomy" } ] }, { "name": "kinesin-like protein KIF19 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003358037", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358037" } ] } ], "function": [ { "annotation": "Plus end-directed microtubule-dependent motor protein that regulates the length of motile cilia by mediating depolymerization of microtubules at ciliary tips.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R7Q5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Q5#function" }, { "database": "UniProtKB", "id": "ARBA00055376", "url": "https://www.uniprot.org/uniprotkb/ARBA00055376#function" }, { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KIF19", "url": "https://www.uniprot.org/uniprotkb/I3LEH8", "locus": { "chromosome": "12", "start_pos": 6775705, "end_pos": 6803014, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021724", "url": "https://www.ensembl.org/id/ENSSSCG00000021724" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021724", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021724", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01370", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01370", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623453", "url": "https://www.ncbi.nlm.nih.gov/gene/100623453", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019821", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019821", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027640", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027640", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623453", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623453", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GEQKQLC", "url": "https://omabrowser.org/oma/group/GEQKQLC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LEH8", "url": "https://www.orthodb.org/?gene=I3LEH8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47968", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47968", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47968:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47968:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47968:SF72", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47968:SF72", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00225", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00225", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6811434", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811434", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-983189", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983189", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003358037", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358037", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R7Q5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Q5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7Q5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Q5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEH8-1", "url": "https://www.uniprot.org/uniprotkb/I3LEH8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKDSGDSKDQQLMVALRVRPISVAELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAIEETSDDMEYEVSMSYLEIYNEMIRDLLNPALGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRSRVRNILQEVRQGRLFMVDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKSGNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYAGRAKNIKTRVKQNLLSVSYHIAQYTSIIADLRGEIQRLKRKIDEQGGRGRARFQPERGNIRPIPAEVPLQSGQGEQAELGQLREQLISAFQEQMDVRRRLLELENHAMEVQIDTSRHLLTIAGWEHEKSRRALKWREEQRKESYTKDDSEKDSDTGDDQPDILEPPEVASARESIAALMGEQKKLRKQKVTLEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTEMQSHALLRDGALRHRREAVRRLEQHRSLCDEIIQGQRQIIDDYNLAVPQHLEELYEVYLRELEEGSLERATIMDRVASRALQDSSLPQISPAGTLLTPESEPESMKTLSTEAQRLHSSFLPPLSTESAANYTFKASPRVWQGKSSSVPTPPPIRIGNLVTQEAPTQDSLVSLSSRINSSPDSSENLSEIPLSHKERKEILTSTKCISVKAARRRTRALGTEGRHLLAPSVERSSLSLNSLSEADDARRPGPLACKRPPSPTLQHAASEDNLSSSTGDTPSRAVERRGNGPGPWLCGQKKSLGKKREESLEAKRRKRRSRSFEVMGQGLSRPKTHLLGPRPVESISDHRMPVCGHPAPGIRQPGRVMLPMAKVKLPPSQNTGPGDSSPLAVPSNPAGVSRRATHGPRLPHGTSTHGKNGRLRHN", "length": 1001, "header": "tr|I3LEH8-1|I3LEH8_PIG Isoform 1 of Kinesin-like protein KIF19 OS=Sus scrofa OX=9823 GN=KIF19 PE=3 SV=1 CANONICAL=I3LEH8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R7Q5-1", "url": "https://www.uniprot.org/uniprotkb/I3LEH8/entry#A0A5G2R7Q5-1", "sequence": { "sequence": "MKDSGDSKDQQLMVALRVRPISVAELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAIEETSDDMEYEVSMSYLEIYNEMIRDLLNPALGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRSRVRNILQEVRQGRLFMVDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKSGNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYAGRAKNIKTRVKQNLLSVSYHIAQYTSIIADLRGEIQRLKRKIDEQGGRGRARFQPERGNIRPIPAEVPLQSGQGEQAELGQLREQLISAFQEQMDVRRRLLELENHAMEVQIDTSRHLLTIAGWEHEKSRRALKWREEQRKESYTKDDSEKDSDTGDDQPDILEPPEVASARESIAALMGEQKKLRKQKVTLEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTEMQSHALLRDGALRHRREAVRRLEQHRSLCDEIIQGQRQIIDDYNLAVPQHLEELYEVYLRELEEGSLERATIMDRVASRALQCSQLHFQGQSPGLAGEEFLCAHPSSHPDRQPGDPGERKEILTSTKCISVKAARRRTRALGTEGRHLLAPSVERSSLSLNSLSEADDARRPGPLACKRPPSPTLQHAASEDNLSSSTGDTPSRAVERRGNGPGPWLCGQKKSLGKKREESLEAKRRKRRSRSFEVMGQGLSRPKTHLLGPRPVESISDHRMPVCGHPAPGIRQPGRVMLPMAKVKLPPSQNTGPGDSSPLAVPSNPAGVSRRATHGPRLPHGTSTHGKNGRLRHN", "length": 924, "header": "tr|A0A5G2R7Q5-1|A0A5G2R7Q5_PIG Computationally mapped isoform of Kinesin-like protein OS=Sus scrofa OX=9823 GN=KIF19 PE=3 SV=1 CANONICAL=I3LEH8-1" }, "locus": { "chromosome": "12", "start_pos": 6802922, "end_pos": 6776225, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076620.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076620.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070162.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070162.1" } ] } }, { "isoform_ac": "I3LEH8-1", "url": "https://www.uniprot.org/uniprotkb/I3LEH8/entry#I3LEH8-1", "sequence": { "sequence": "MKDSGDSKDQQLMVALRVRPISVAELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAIEETSDDMEYEVSMSYLEIYNEMIRDLLNPALGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRSRVRNILQEVRQGRLFMVDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKSGNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYAGRAKNIKTRVKQNLLSVSYHIAQYTSIIADLRGEIQRLKRKIDEQGGRGRARFQPERGNIRPIPAEVPLQSGQGEQAELGQLREQLISAFQEQMDVRRRLLELENHAMEVQIDTSRHLLTIAGWEHEKSRRALKWREEQRKESYTKDDSEKDSDTGDDQPDILEPPEVASARESIAALMGEQKKLRKQKVTLEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTEMQSHALLRDGALRHRREAVRRLEQHRSLCDEIIQGQRQIIDDYNLAVPQHLEELYEVYLRELEEGSLERATIMDRVASRALQDSSLPQISPAGTLLTPESEPESMKTLSTEAQRLHSSFLPPLSTESAANYTFKASPRVWQGKSSSVPTPPPIRIGNLVTQEAPTQDSLVSLSSRINSSPDSSENLSEIPLSHKERKEILTSTKCISVKAARRRTRALGTEGRHLLAPSVERSSLSLNSLSEADDARRPGPLACKRPPSPTLQHAASEDNLSSSTGDTPSRAVERRGNGPGPWLCGQKKSLGKKREESLEAKRRKRRSRSFEVMGQGLSRPKTHLLGPRPVESISDHRMPVCGHPAPGIRQPGRVMLPMAKVKLPPSQNTGPGDSSPLAVPSNPAGVSRRATHGPRLPHGTSTHGKNGRLRHN", "length": 1001, "header": "tr|I3LEH8-1|I3LEH8_PIG Isoform 1 of Kinesin-like protein KIF19 OS=Sus scrofa OX=9823 GN=KIF19 PE=3 SV=1 CANONICAL=I3LEH8-1" }, "locus": { "chromosome": "12", "start_pos": 6802922, "end_pos": 6776225, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023323.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023323.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022466.1", "url": "https://www.ensembl.org/id/ENSSSCP00000022466.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 727, "start_aa": "Thr", "end_pos": 727, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr727", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623453", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623453", "resource": "KEGG Pathway" }, { "id": "R-SSC-6811434", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811434", "resource": "Reactome", "description": "COPI-dependent Golgi-to-ER retrograde traffic" }, { "id": "R-SSC-983189", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983189", "resource": "Reactome", "description": "Kinesins" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A976-1", "protein_name": "Kinesin-like protein", "gene_name": "Kif19", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDSGDSKDQQLMVALRVRPISVSELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAIEETSNDMEYEVSMSYLEIYNEMIRDLLNPALGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRNRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGGNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASTAFEESRNTLTYAGRAKNIRTRVKQNLLNVSYHIAQYTSIIADLRGEIQRLKCKIDQQAGRGQARGKLDRGDIRHIQAEVQLHSGQEEQAEMGQLREQLISAFHEQMDVRRRLLELENQAMEVQIDTSRHLLTIASWEHEKSRRALKWREERRKESYTKEDSEKDSDTGDEPDNLEPPEVASARENIAALVGEQKKLRKEKLALEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTEMQSHALLRDSALRHRREAVRRLEQHRSLCDEIIQGQRQIIDDYNLEIPRHLEELYEVYLRELEEGSLERATIMDRVASRALQDSSLPKITPAGTTLTPDSDLESVKTLSSEAQCPQNNTLPPLGTDSDSYHMFKASPRAWQVKSSSVPTPPPIQVGSLVTQEAPPQDSLGSQINSSPDSSENLSEILLSHKERKEILTRTKCISVKAAQRRSRALGTEGRHLLAPATERSSLSLHSLSEADDVRPPGPLACKRPPSPTLQHAISEDNLSSSTGEGPARAVGPRGDGSGPWVRGQKKCLSKKREESLEAKRRKRRSRSFEVTGQGLSRSKTHLLGPRPSEGVSDRRMPACGRPSPGVRHLGKVSLPLAKVKFPPNQNTGSGNPSPLLVPSNQAGVSRRATRGPNLPHGSSTFGKDGRLQHN", "length": 997 }, "evidence": [ { "id": "I3LEH8", "url": "https://omabrowser.org/oma/group/I3LEH8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BFF4-1", "protein_name": "Kinesin-like protein KIF19", "gene_name": "KIF19", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKDSGDSKDQQLMVALRIRPISVAELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAIEETSDDMEYEVSMSYLEIYNEMIRDLLNPSLGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMRGNRQRTQEPTAANQTSSRSHAVLQVAVRQRSRVRDVLQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGTNKYVNYRDSKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYASRAKSIKTRVKRNLLSVSYHIAQYTNIIADLRGEIQRLKRKIEERGGRSLDRAQLGRGDIRHIQAEVQLHSGQGEQAAMEHLREQLISTFQEQMDTRRRLLELENRGMELETDTSHHLLTIASWKHEKSRRALKWREERRKESFTKDDTRKDSDTGDNQPDIEEPAEVVSARESIATLMTEQKKLRKQKLALEQRCRELRARGRRLEETLPRRVSSEQQREALGLLCRVHELELEKAEMQSQALLRDGALRHRREALRRLEQRLSLCEEIIRAQRQLIQDCNLAVPQHLKELYEVYLREHEEGNLERATMMDRLASRALQDSALPKISPPGTVPTPEESDLESVKMPNSESPHQHGSFLPLLGTESEANHPFKTSSRAWQAKGFCLPTPPPIRGGNLVTQEATTQVGLNGQINSSPESIENLSEIPLSHKGRKETAADTKSIAGKAARHHLQALGAKGRQLLAPTIKQSSLSLHLKGQTDDVRPPGPLACKRPPSPTLQHTASEDSLSSSTGEAPSRAVECHGNGPCPPLQGQEKSPRNKREESLEAKRKRRSQAFEVTGQGIPTQLPAHLALQPTQLSRPKMHVAGPRPVENHTEEQRMPVVGHLTPTIRPLGKTTLPMAKVKLPPCQSLGPEDTTPVAAPSNPGDVSERVARMPRLPYGTSTQNKNGHFGHN", "length": 1014 }, "evidence": [ { "id": "I3LEH8", "url": "https://omabrowser.org/oma/group/I3LEH8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q2TAC6-1", "protein_name": "Kinesin-like protein KIF19", "gene_name": "KIF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKDSGDSKDQQLMVALRVRPISVAELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDQEPGIYVQTLNDLFRAIEETSNDMEYEVSMSYLEIYNEMIRDLLNPSLGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVTVRQRSRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGSNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYAGRAKNIKTRVKQNLLNVSYHIAQYTSIIADLRGEIQRLKRKIDEQTGRGQARGRQDRGDIRHIQAEVQLHSGQGEKAGMGQLREQLASAFQEQMDVRRRLLELENRAMEVQIDTSRHLLTIAGWKHEKSRRALKWREEQRKECYAKDDSEKDSDTGDDQPDILEPPEVAAARESIAALVDEQKQLRKQKLALEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTEMQSHALLRDGALRHRHEAVRRLEQHRSLCDEIIQGQRQIIDDYNLAVPQRLEELYEVYLRELEEGSLEQATIMDQVASRALQDSSLPKITPAGTSLTPDSDLESVKTLSSDAQHLQNSALPPLSTESEGHHVFKAGTGAWQAKSSSVPTPPPIQLGSLVTQEAPAQDSLGSWINSSPDSSENLSEIPLSHKERKEILTGTKCIWVKAARRRSRALGTEGRHLLAPATERSSLSLHSLSEGDDARPPGPLACKRPPSPTLQHAASEDNLSSSTGEAPSRAVGHHGDGPRPWLRGQKKSLGKKREESLEAKRRKRRSRSFEVTGQGLSHPKTHLLGPHQAERISDHRMPVCRHPAPGIRHLGKVTLPLAKVKLPPSQNTGPGDSSPLAVPPNPGGGSRRATRGPRLPHGTSTHGKDGCSRHN", "length": 998 }, "evidence": [ { "id": "I3LEH8", "url": "https://omabrowser.org/oma/group/I3LEH8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99PT9-1", "protein_name": "Kinesin-like protein KIF19", "gene_name": "Kif19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKDSGDSKDQQLMVALRVRPISVAELEEGATLIAHKMDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAIEETSNDMEYEVSMSYLEIYNEMIRDLLNPALGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRSRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGSNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASTAFEESRNTLTYAGRAKNIRTRVKQNLLNVSYHIAQYTSIIADLRGEIQRLKCKIDQQAGRGQARGKLDRGDIRHIQAEVQLHSGQEGPAEMGQLREQLISAFHEQMDVRRRLLELENQAMEVQIDTSRHLLTIAGWEHEKSRRALKWREERRKESYTKEDSEKDSDTGDEPDNLEPPEVASARENIAALVGEQKKLRKEKLALEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTEMQSHALLRDSALRHRREAVRRLEQHRSLCDEIIQGQRQIIDDYNLEVPRHLEELYEVYLRELEEGSLERATIMDRVASRALQDSSLPKITPAGATLTPDSDLESVKTLSSEAQRPQNNTLPPLGTDSESYHVFKASPRAWQVKSSSVPTPPPIQVGSLVTQEAPPQDSLGSQINSSPESSENLSEILLSHKERKEILTRTKCISVKAAQRRSRALGTEGRHLLAPATERSSLSLHSLSEADDARPPGQLACKRPPSPTLQHAISEDNLSSSTGEGPSRAVGPRGDGTGSWVRGQKKCLSKKREESLEAKRRKRRSRSFEVTGQGLSRPKTHLLGPRPSEGLSDRRMPACGRPSPGVRHLGKVSLPLAKVKFPPNQNTGSGNPSPLLVAPNQAGVSRRATRGPSLPHGSSTFGKDGRLQHN", "length": 997 }, "evidence": [ { "id": "I3LEH8", "url": "https://omabrowser.org/oma/group/I3LEH8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "axonemal microtubule depolymerization", "id": "GO:0060404", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060404", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "plus-end specific microtubule depolymerization", "id": "GO:0070462", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070462", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "microtubule-based movement", "id": "GO:0007018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007018", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "microtubule motor activity", "id": "GO:0003777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003777", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "plus-end-directed microtubule motor activity", "id": "GO:0008574", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008574", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "kinesin complex", "id": "GO:0005871", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005871", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" }, { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "I3LEH8", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 214, "end_pos": 216, "annotation": "n_glycosylation_sequon" }, { "start_pos": 274, "end_pos": 276, "annotation": "n_glycosylation_sequon" }, { "start_pos": 708, "end_pos": 710, "annotation": "n_glycosylation_sequon" }, { "start_pos": 755, "end_pos": 757, "annotation": "n_glycosylation_sequon" }, { "start_pos": 763, "end_pos": 765, "annotation": "n_glycosylation_sequon" }, { "start_pos": 848, "end_pos": 850, "annotation": "n_glycosylation_sequon" }, { "start_pos": 97, "end_pos": 99, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LEH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEH8" }, { "id": "PS50067", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50067" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Kinesin motor", "eco_id": "ECO_0000259", "start_pos": 11, "end_pos": 346, "start_aa": "Gln", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 727 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 214, "end_pos": 216 }, { "start_pos": 274, "end_pos": 276 }, { "start_pos": 708, "end_pos": 710 }, { "start_pos": 755, "end_pos": 757 }, { "start_pos": 763, "end_pos": 765 }, { "start_pos": 848, "end_pos": 850 }, { "start_pos": 97, "end_pos": 99 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LEI5-1", "uniprot_ac": "I3LEI5", "uniprot_id": "I3LEI5_PIG", "mass": { "chemical_mass": 62409.0, "monoisotopic_mass": 62409.0 }, "refseq": {}, "gene_names": [ { "name": "CES3", "type": "recommended", "evidence": [ { "id": "I3LEI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEI5" } ] } ], "protein_names": [ { "name": "Carboxylic ester hydrolase", "type": "recommended", "evidence": [ { "id": "I3LEI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEI5/entry#names_and_taxonomy" } ] }, { "name": "3.1.1.-", "type": "synonym", "evidence": [ { "id": "I3LEI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEI5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LEI5", "url": "https://www.uniprot.org/uniprotkb/I3LEI5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CES3", "url": "https://www.uniprot.org/uniprotkb/I3LEI5", "locus": { "chromosome": "6", "start_pos": 27638760, "end_pos": 27627742, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024476", "url": "https://www.ensembl.org/id/ENSSSCG00000024476" } ] } } ], "crossref": [ { "id": "I3LEI5", "url": "https://alphafold.ebi.ac.uk/entry/I3LEI5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024476", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024476", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "3.1.1.1", "url": "https://www.brenda-enzymes.org/enzyme.php?ecno=3.1.1.1&UniProtAcc=I3LEI5", "database": "BRENDA", "categories": [ "Enzyme and Pathway" ] }, { "id": "cd00312", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00312", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002018", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002018", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019826", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019826", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050309", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050309", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11559", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11559", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00135", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00135", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-211945", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-211945", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8964038", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8964038", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2REZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REZ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2REZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REZ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEI5", "url": "https://www.uniprot.org/uniprotkb/I3LEI5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEI5-1", "url": "https://www.uniprot.org/uniprotkb/I3LEI5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METVVRTASRLLVWVACVLVALSAAVTGREATQPEVDTTLGRVRGRQVGVKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGARRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLRQKAVEEILLDKKLKTIASYTVDGTFFPKTPKELLREKQFHSVPFLLGVNNHEFGWLIPRGWGIDQMDQINLEDMLAPLKPFVGGPDAPAEVIPTIIDEYLGRHSDGQAKREAFQELMGDVIMHFPVLEFSRNLHAAGASVFFYEFQHRPSSFAKIKPAWVQADHGAEMPFVFGGPFLTDESSMLAFPDATEEEKKLSLTMMAQWTHFARTGDPNGKGLPFWPPFNHSEQYLEISPVPQVSQKLRKARMQFWAETLPTKIRQWQQKQKGRKAQEEL", "length": 569, "header": "tr|I3LEI5-1|I3LEI5_PIG Isoform 1 of Carboxylic ester hydrolase OS=Sus scrofa OX=9823 GN=CES3 PE=1 SV=3 CANONICAL=I3LEI5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2REZ9-1", "url": "https://www.uniprot.org/uniprotkb/I3LEI5/entry#A0A5G2REZ9-1", "sequence": { "sequence": "METVVRTASRLLVWVACVLVALSAAVTGREATQPEVDTTLGRVRGRQVGVKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGARRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLRQKAVEEILLDKKLKTIASYTVDGTFFPKTPKELLREKQFHSVPFLLGVNNHEFGWLIPRVRLGYPDQMDQINLEDMLAPLKPFVGGPDAPAEVIPTIIDEYLGRHSDGQAKREAFQELMGDVIMHFPVLEFSRNLHAAGASVFFYEFQHRPSSFAKIKPAWVQADHGAEMPFVFGGPFLTDESSMLAFPDATEEEKKLSLTMMAQWTHFARTGDPNGKGLPFWPPFNHSEQYLEISPVPQVSQKLRKARMQFWAETLPTKIRQWQQKQKGRKAQEEL", "length": 571, "header": "tr|A0A5G2REZ9-1|A0A5G2REZ9_PIG Computationally mapped isoform of Carboxylic ester hydrolase OS=Sus scrofa OX=9823 GN=CES3 PE=1 SV=1 CANONICAL=I3LEI5-1" }, "locus": { "chromosome": "6", "start_pos": 27637505, "end_pos": 27627759, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084024.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084024.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069512.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069512.1" } ] } }, { "isoform_ac": "I3LEI5-1", "url": "https://www.uniprot.org/uniprotkb/I3LEI5/entry#I3LEI5-1", "sequence": { "sequence": "METVVRTASRLLVWVACVLVALSAAVTGREATQPEVDTTLGRVRGRQVGVKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGARRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLRQKAVEEILLDKKLKTIASYTVDGTFFPKTPKELLREKQFHSVPFLLGVNNHEFGWLIPRGWGIDQMDQINLEDMLAPLKPFVGGPDAPAEVIPTIIDEYLGRHSDGQAKREAFQELMGDVIMHFPVLEFSRNLHAAGASVFFYEFQHRPSSFAKIKPAWVQADHGAEMPFVFGGPFLTDESSMLAFPDATEEEKKLSLTMMAQWTHFARTGDPNGKGLPFWPPFNHSEQYLEISPVPQVSQKLRKARMQFWAETLPTKIRQWQQKQKGRKAQEEL", "length": 569, "header": "tr|I3LEI5-1|I3LEI5_PIG Isoform 1 of Carboxylic ester hydrolase OS=Sus scrofa OX=9823 GN=CES3 PE=1 SV=3 CANONICAL=I3LEI5-1" }, "locus": { "chromosome": "6", "start_pos": 27637505, "end_pos": 27627759, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023639.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023639.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022473.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022473.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LEI5", "url": "https://www.uniprot.org/uniprotkb/I3LEI5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-211945", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-211945", "resource": "Reactome", "description": "Phase I - Functionalization of compounds" }, { "id": "R-SSC-8964038", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8964038", "resource": "Reactome", "description": "LDL clearance" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "I3LEI5", "url": "https://www.uniprot.org/uniprotkb/I3LEI5" } ], "pmid": "" }, { "name": "carboxylesterase activity", "id": "GO:0106435", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106435", "evidence": [ { "database": "UniProtKB", "id": "I3LEI5", "url": "https://www.uniprot.org/uniprotkb/I3LEI5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 212, "end_pos": 214, "annotation": "n_glycosylation_sequon" }, { "start_pos": 519, "end_pos": 521, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-8937442", "name": "CES3 hydrolyses CHEST to CHOL and LCFA(-)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, lipid droplet, transport vesicle membrane", "input_participant_list": [ "R-ALL-163579" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8937442", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8937442" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-163579", "participant_name": "CHEST [lipid droplet]", "crossref": [ { "id": "17002", "database": "ChEBI", "url": "" }, { "id": "C02530", "database": "COMPOUND", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LEI5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 569, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LEI5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LEI5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LEI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEI5" }, { "id": "PF00135", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00135" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Carboxylesterase type B", "eco_id": "ECO_0000259", "start_pos": 33, "end_pos": 545, "start_aa": "Gln", "end_aa": "Trp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 212, "end_pos": 214 }, { "start_pos": 519, "end_pos": 521 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"uniprot_ac": "I3LEK1", "uniprot_id": "I3LEK1_PIG", "mass": { "chemical_mass": 36439.0, "monoisotopic_mass": 36439.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100625789", "type": "recommended", "evidence": [ { "id": "I3LEK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEK1" } ] } ], "protein_names": [ { "name": "G-protein coupled receptors family 1 profile domain-containing protein", "type": "recommended", "evidence": [ { "id": "I3LEK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LEK1/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "I3LEK1", "url": "https://www.uniprot.org/uniprotkb/I3LEK1#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], 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"https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EFIVTMI", "url": "https://omabrowser.org/oma/group/EFIVTMI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR26453", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26453", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LEK1", "url": "https://www.uniprot.org/uniprotkb/I3LEK1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEK1-1", "url": "https://www.uniprot.org/uniprotkb/I3LEK1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MENLIFICCFFPISGIQRMKINHTILKEFILVGFSVYPHAQTLLFVVFFCLYLLTLTGNLAIMYLTWVDRCLHTPMYLFLSALSFSETCYTLTITPKMLSDLLTKNRGISVIGCGLQMYFFLGLGGTHSIILTLMGFDRFLAICNPLRYPLLMTNVVCGQLVASAWVAGFIISITETALIFRGSFCGPNLVKHFFCHMRAVVRLSCLDSELTELIVTAISVSALMGTFLLIILTYVFILSTVLRIPSAEGKQKAFSTCASHLTVVFIHFGFASIVYLKPGASGGDDTVIAVPYTVITPFLSPLIFSLRNKDMKNAFRKVLGKTSSLNK", "length": 328, "header": "tr|I3LEK1-1|I3LEK1_PIG Isoform 1 of G-protein coupled receptors family 1 profile domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100625789 PE=3 SV=2 CANONICAL=I3LEK1-1" }, "isoforms": [ { "isoform_ac": "I3LEK1-1", "url": "https://www.uniprot.org/uniprotkb/I3LEK1/entry#I3LEK1-1", "sequence": { "sequence": "MENLIFICCFFPISGIQRMKINHTILKEFILVGFSVYPHAQTLLFVVFFCLYLLTLTGNLAIMYLTWVDRCLHTPMYLFLSALSFSETCYTLTITPKMLSDLLTKNRGISVIGCGLQMYFFLGLGGTHSIILTLMGFDRFLAICNPLRYPLLMTNVVCGQLVASAWVAGFIISITETALIFRGSFCGPNLVKHFFCHMRAVVRLSCLDSELTELIVTAISVSALMGTFLLIILTYVFILSTVLRIPSAEGKQKAFSTCASHLTVVFIHFGFASIVYLKPGASGGDDTVIAVPYTVITPFLSPLIFSLRNKDMKNAFRKVLGKTSSLNK", "length": 328, "header": "tr|I3LEK1-1|I3LEK1_PIG Isoform 1 of G-protein coupled receptors family 1 profile domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100625789 PE=3 SV=2 CANONICAL=I3LEK1-1" }, "locus": { "chromosome": "4", "start_pos": 91683874, "end_pos": 91682891, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031858.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031858.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022489.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022489.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LEK1", "url": "https://www.uniprot.org/uniprotkb/I3LEK1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F8VQB1-1", "protein_name": "Olfactory receptor", "gene_name": "Or10x1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MINQTILKEFILIGFSAYPLVQTWLFVVFLCLYMVTLAGNLAIMGLTWVDRSLHTPMYFFLSALSFSETCYTLTIIPKMLVDLIDKDSRISVTGCGLQMCFFLGLGGTNCILLTLMGYDRFLAICNPLRYPLLMTNVACGQLVASAWVGGFFISLIETTLIFRVSFCIPNLIRHFFCHMRAVLRLSCTDSNFTEFIVTLMSVSGLLGTFLLILLTYVFILSSVLKIPSAEGKQKAFSTCASHLTVVLIHFVFASVVYMKPENSGGDDTLIAVPYTVITPFLSPIIFTLRNKDMKNAFRKIMRKTVVLKK", "length": 309 }, "evidence": [ { "id": "I3LEK1", "url": "https://omabrowser.org/oma/group/I3LEK1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NGY0-1", "protein_name": "Olfactory receptor 10X1", "gene_name": "OR10X1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ATRAID", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2", "locus": { "chromosome": "3", "start_pos": 111914708, "end_pos": 111919946, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022058", "url": "https://www.ensembl.org/id/ENSSSCG00000022058" } ] } } ], "crossref": [ { "id": "I3LEQ2", "url": "https://alphafold.ebi.ac.uk/entry/I3LEQ2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022058", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022058", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR042350", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042350", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15926", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15926", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15926:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15926:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LEQ2-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236, "header": "tr|I3LEQ2-1|I3LEQ2_PIG Isoform 1 of All-trans retinoic acid induced differentiation factor OS=Sus scrofa OX=9823 GN=ATRAID PE=4 SV=2 CANONICAL=I3LEQ2-1" }, "isoforms": [ { "isoform_ac": "I3LEQ2-1", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2/entry#I3LEQ2-1", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236, "header": "tr|I3LEQ2-1|I3LEQ2_PIG Isoform 1 of All-trans retinoic acid induced differentiation factor OS=Sus scrofa OX=9823 GN=ATRAID PE=4 SV=2 CANONICAL=I3LEQ2-1" }, "locus": { "chromosome": "3", "start_pos": 111919607, "end_pos": 111914919, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023065.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023065.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022541.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022541.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "I3LEQ2", "url": "https://omabrowser.org/oma/group/I3LEQ2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "xenobiotic transmembrane transporter activity", "id": "GO:0042910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042910", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2" } ], "pmid": "" }, { "name": "lysosomal membrane", "id": "GO:0005765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005765", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "positive regulation of bone mineralization", "id": "GO:0030501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030501", "evidence": [ { "database": "UniProtKB", "id": "I3LEQ2", "url": "https://www.uniprot.org/uniprotkb/I3LEQ2" } ], "pmid": "" }, { "name": 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}, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LET1-1", "uniprot_ac": "I3LET1", "uniprot_id": "I3LET1_PIG", "mass": { "chemical_mass": 91479.0, "monoisotopic_mass": 91479.0 }, "refseq": { "ac": "XP_003133578", "name": "protein FAM171B", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133578" }, "gene_names": [ { "name": "FAM171B", "type": "recommended", "evidence": [ { "id": "I3LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LET1" } ] }, { "name": "FAM171B", "type": "synonym", "evidence": [ { "id": "XP_003133578", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133578" } ] } ], "protein_names": [ { "name": "Family with sequence similarity 171 member B", "type": "synonym", "evidence": [ { "id": "I3LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LET1/entry#names_and_taxonomy" } ] }, { "name": "protein FAM171B", "type": "synonym", "evidence": [ { "id": "XP_003133578", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133578" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LET1", "url": "https://www.uniprot.org/uniprotkb/I3LET1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FAM171B", "url": "https://www.uniprot.org/uniprotkb/I3LET1", "locus": { "chromosome": "15", "start_pos": 91798010, "end_pos": 91719511, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025134", "url": "https://www.ensembl.org/id/ENSSSCG00000025134" } ] } } ], "crossref": [ { "id": "ENSSSCG00000025134", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025134", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525259", "url": "https://www.ncbi.nlm.nih.gov/gene/100525259", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR018890", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018890", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048530", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048530", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049175", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049175", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525259", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525259", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WIAAPHP", "url": "https://omabrowser.org/oma/group/WIAAPHP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LET1", "url": "https://www.orthodb.org/?gene=I3LET1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31626", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31626", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31626:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31626:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10577", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10577", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20771", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20771", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003133578", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133578", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LET1", "url": "https://www.uniprot.org/uniprotkb/I3LET1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LET1-1", "url": "https://www.uniprot.org/uniprotkb/I3LET1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARLSRRVPCTLLLGLAAVLLKARLVPAAARAELSRSDLSLIQQQQQQQQQRQREEAEEEKPEVPEASSIATVPVSVFMLKVQVNDIISRQYLSQAVVEVFVNYTKTNSTVTRNNGAVLIRVPYKLGLSLTIIAYKDGYVLTHLPWKTGRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLADAKSQPSVQFSKALIKLPDNHHISNVTGYLTVLQQFLKVDNFLYTTGITLNKSGFESIELTPLAAICVKIYSGGRELKVDGSIQVSLPLLHTNDISAGDHIPAWTFDMNTGAWVNHGRGMVKEYNNHLIWTYDAPHLGYWIAAPLLGTRGSGINGDSKDITAYHTVFLTAILGGTVVIVIGFFAVLLCYCRDKCGTTQKRERNITKLEVLKRDQTTSTTHINHISSVKVALKTEDKSQLFNAKNSSYSPQKKEPSKVEVEERVSMVKTRDNLKIYNEDVSFLSVNQNNYSRNTTQSLEPNVGSKQPKHINNNLSPSLGNAQEEKRYLTGSEEVYGHSHLPEQLVHIYSQPIAILQTSDLFSTPEQLHSAKSATLPRKGQLVYGQLMEPVNRENFTQTLPKMPMHSHAQPPDAREESIPLEGQQSLPSQTSDWSRYSNSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRAQSNDTSLDSGVDMNEHHSSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHILDGGSGAIMEHPGEESPGRKNTVDDFEANISPTKKRGRPPLAKKDSKTNIWRKREERPLLPIN", "length": 821, "header": "tr|I3LET1-1|I3LET1_PIG Isoform 1 of Family with sequence similarity 171 member B OS=Sus scrofa OX=9823 GN=FAM171B PE=3 SV=2 CANONICAL=I3LET1-1" }, "isoforms": [ { "isoform_ac": "I3LET1-1", "url": "https://www.uniprot.org/uniprotkb/I3LET1/entry#I3LET1-1", "sequence": { "sequence": "MARLSRRVPCTLLLGLAAVLLKARLVPAAARAELSRSDLSLIQQQQQQQQQRQREEAEEEKPEVPEASSIATVPVSVFMLKVQVNDIISRQYLSQAVVEVFVNYTKTNSTVTRNNGAVLIRVPYKLGLSLTIIAYKDGYVLTHLPWKTGRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLADAKSQPSVQFSKALIKLPDNHHISNVTGYLTVLQQFLKVDNFLYTTGITLNKSGFESIELTPLAAICVKIYSGGRELKVDGSIQVSLPLLHTNDISAGDHIPAWTFDMNTGAWVNHGRGMVKEYNNHLIWTYDAPHLGYWIAAPLLGTRGSGINGDSKDITAYHTVFLTAILGGTVVIVIGFFAVLLCYCRDKCGTTQKRERNITKLEVLKRDQTTSTTHINHISSVKVALKTEDKSQLFNAKNSSYSPQKKEPSKVEVEERVSMVKTRDNLKIYNEDVSFLSVNQNNYSRNTTQSLEPNVGSKQPKHINNNLSPSLGNAQEEKRYLTGSEEVYGHSHLPEQLVHIYSQPIAILQTSDLFSTPEQLHSAKSATLPRKGQLVYGQLMEPVNRENFTQTLPKMPMHSHAQPPDAREESIPLEGQQSLPSQTSDWSRYSNSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRAQSNDTSLDSGVDMNEHHSSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHILDGGSGAIMEHPGEESPGRKNTVDDFEANISPTKKRGRPPLAKKDSKTNIWRKREERPLLPIN", "length": 821, "header": "tr|I3LET1-1|I3LET1_PIG Isoform 1 of Family with sequence similarity 171 member B OS=Sus scrofa OX=9823 GN=FAM171B PE=3 SV=2 CANONICAL=I3LET1-1" }, "locus": { "chromosome": "15", "start_pos": 91794781, "end_pos": 91724456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031268.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031268.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022570.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022570.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LET1", "url": "https://www.uniprot.org/uniprotkb/I3LET1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525259", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525259", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MIA3-1", "protein_name": "Family with sequence similarity 171 member B", "gene_name": "FAM171B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MARLSRRVPCTLLLGLAAVLLKARLVPAAARAELSRSDLSLIQQQQQQQRQREEAEEERPEVPGASSTAAAPVSVFMLKVQVNDIISRQYLSQAVVEVFVNYTKTNSTVTRNNGAVLISVPYKLGLSLTIIAYKDGYVLTPLPWKTRRMPIYSSVTLSLFPQNQANIWLFEDTILITGKLADAKSQPSVQFSKALIKLPNNHHISNVTGYLTVLQQFLKVDNFLYTTGITLNKSGFESIELTPLAAICVKIYSGGKELKVDGSIQISLPLLHTNDVSAGDHVPAWTFDMNTGAWVNHGQGMVKEYNSHLIWTYDAPHLGYWIAAPLPGTRGSGMNGDSKDITAYHTVFLTAILGGTIVIVIGFFAVLLCYCRDKCGTPQKRERNTTKLEVLKRDQTTSTTHINHISSVKVALKTEDKSQLFNAKSSSYSPQKKESSKVEAEERVSMVKTRDNLKIYNEDVSFLSVNQNNYSRNPAQSLEPNVGSKQLKHVNNNMSSSLGDTQEEKRYLTGNEEAYGHPHVPEQIMHIYSQPIAILQTSDLFPTPEQLHPAKSATLPRKGQLVYGQLMEPVNRENFTQTLPKMPMHSHAQPPDAREENFPLEGQQSLPSQTSDWSRYSNSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRAQSNDTSLDSGVDMNEHHSSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHILDGGSGAIMEHPGEESPGRKSTAEDFEANISPTKKRGRPPPLAKRDSKTNIWKKREERPLIPIN", "length": 820 }, "evidence": [ { "id": "I3LET1", "url": "https://omabrowser.org/oma/group/I3LET1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V0YJG5-1", "protein_name": "Family with sequence similarity 171 member B", "gene_name": "FAM171B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPGTRGPPPSLLLALLLLLLQGRPTAAAATRPQPERAALPGGAPAAAASGSVFMLKVQVNDIISHQYLAQAVVEVFVNYTKTNSTLTGNNGAVLIKVPYKLGLSLTIVSYKDGYMLTPLPWKTGRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLSDAKSQPSVQFQKSLIKLPTDHHITNVTAYLTVPEQFLKVDSFLYTTGILLNKSGFKSIELTPLAAICANILLAGQELKVNGPIQITLPLPMSTVKSGDAIPAWTFDMKTGAWVSRGLGMVKEANDQLIWTYTAQHLGYWIAAPLPGTRESIISAVSKDITAYHTVFLTAILGGTVIIIIGFFAVLLCYCRDKCGRTQKKEKNTTKLDVIKKDQTTSTTHINHINAVKGSLKLEDKSQLYTPKMSSYSPQRRMSTDTEDGKSRDNFKIYSEDASYQSSYQTGQSINSPHSLEPSAGLRHLQPPKHTNGATSQAPRDIQEQNRYLTLQEEIYGLSHIPEHLMHIYNQPIAILQTSDLFHSPEQLHTAKSATLPRKGQLVYSPMMEPVNRDGYIQTLPKMPLHSHPQPSVCRDEKSTLDGEQGLPSQTSNWGRYTNSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPIAQVRHSFIDIKKGRKTESNDTSLDSGVDMNEHHPGRKLEREKTFIKNMPHSKILYLEDLDLSSSESGTTVCTPEDQAVRHILDGGNGPAIEQHDEEGLRRKTVSGSQESGIPSPKKRDRPSLTKRDSKTNIWKKREERPLIPIN", "length": 792 }, "evidence": [ { "id": "I3LET1", "url": "https://omabrowser.org/oma/group/I3LET1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZTG3-1", "protein_name": "Family with sequence similarity 171, member B", "gene_name": "Fam171b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARLCRRVSCALLLGLAAVLLKARLVPAAARAELSRSDLSLIQQQQQQQQQEQRQREEAEEERMEVAGASFTLVVPVSVFMLKVQVNDIISRQYLSQAVVEVFVNYTKTNSTVTRSNGAVLIKVPYRLGLSLTIIAYKDGYVLTPLPWKTGRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLTDAKSQPSVQFSKASIKLPDNHHISNVTGYLTVLQQFLKGDNFLSAIGITYSTGFENVELTPHAAICVKIYSGGKELNVAGPIHISLPLLHTSNVNVGDRIPAWTFNMKIGAWVHHDWGTVKEHNGHLIWTYDAPHLGYWIAAPSPSTLDLGINEDFPNVIGYHTAFLTAILGGTIVIIIVCLAALLCYCREKYGTPQKRERNITKLEILKRDQTTSTTHINHISSVKVALKAEDKPQLFNAKTSSYSPQKKETTKTETEERIPMVKTRDNFKIYNEDVSFLSVNHNNYSRNPTQSLEPSIGSKQPKHMNNNLSPSLGDAQEEKRYLTGNDEVYGRSHLPEQLMHIYSQPIAILQTSDLFSMPDQLHAAKSATLPRKGQLVYGQLMEPVNRENFTQTLPKMPMHSHTQDPDAREEDIVLEGQQSLPSQTSDWSRYSNSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRTQSNDTSLDSGVDMNEHQLSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHILDGGGGVIIEHPREESPGSKSTVEDFEANVSPTKKRGRPLPLAKRDSKTNIWKKREERPLIPIN", "length": 823 }, "evidence": [ { "id": "I3LET1", "url": "https://omabrowser.org/oma/group/I3LET1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "I3IRX1-1", "protein_name": "Protein FAM171B precursor", "gene_name": "fam171b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLSGCLLLAALLIFSKDVSVRRAEGAALTRGLASLSDQDNAEDTRTSPVQGQGDATVSPPSSESLLTLKVWVKDASSQRFLTGALVSVFLNGSQIHSSRTLGNGEVTIIVPYRLGLTLTLVASMEGYMLTQLPWKTTKIPIFSVITLSVHPQTQGNIWLFEDTVLIARKTSDLSFQPSVQFPKSLLKLPENTTISMLSAYLTAPGLPTEKDSNYFTLNLNGKGGYRNIKLSPLAMISAQIVSNGKEVDVKGPIQLTIPLPYYTHLRPSDSLPAWTFNMTIGTWVNKGLGIVQMEKNGLVWTYTAPQLGNWIAAPLPSSGYMGLASSMDFIYYHTYLLVGILGGTLVVVVGFLSVIVFHCRDLNHEAGRRRWNSTRLTVLKKDQTTSTSSDEAQELFFHNGERSYSLAARGISHDASDSPRHQANYNIYVENVGRPGGNLYENIGAVGLEGLRAPMSNLYVNSDEVAKLREKMEQNGARHGGVENVVFKDKLFHIYNQPLAIVQAPELFNSQGQADPSGSRSATFPRNGMEHGAQTERNLKDSFTQTLPKAPQQDNDEQQSLEGAQAVAINPGLWGRYSHLLESVSVPGTLNEAAGMGPFRGELQGISEQTLLELTKGKPSIHPPRAWFVSLDGKPAAQVRHSVIELQGRHRPGSSNDTSLDSGVDMNELQQPLRKSEEPSSASMAKISGNQEQDLSSSEIGSPEDSSLRNTLESSSAAIPNLPEDRDAGDTSSESKSTPPPRRLRKVRDKKPDKKTSRHMREERPQTKH", "length": 771 }, "evidence": [ { "id": "I3LET1", "url": "https://omabrowser.org/oma/group/I3LET1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q14CH0-1", "protein_name": "Protein FAM171B", "gene_name": "Fam171b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MARLCRRVPCALLLGLAAVLLKARLVPAAARAELSRSDLSLIQQQQQQQQQQQLQEQKQREEAEEGRPEVPGASSTLVAPVSVFMLKVQVNDIVSRQYLSQAVVEVFVNYSKTNSTVTRSNGAVLIKVPYQLGLSLTIVAYKDGYVLTSLPWKTGRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLADAKSQPSVQFSKAFIKLPDNHHISNVTGYLTVLHQFLKVDSFLPATGVTYKSGLENVELTPHAAICVKIYSGGKELKVDGSIHVSLPLLHTSNIKIGDRIPAWTFDMNAGVWVHHGWGTVKEHNSHLIWTYDAPHLGYWIAAPSPATLDFGINDDFQDITAYHTVFLTAILGGTIVIIIGFFAILLCYCRGKCATPQKRERNITKLEILKRDQTTSTTHINHISSVKTALKAEDKPQLFNAKTSSYSPQRKETTKTEAEERISMVKTRDNFKIYNEDVSFLSVNHNYSRNPTQSLEPSMGSKQPKHINNNLSPSLGDAQEEKRYLTGTEEVYGRSHIPEQLMHIYSQPIAILQTSDLFSMPEQLHAAKSATLPRKGQLVYGQLMEPVNRENFTQTLPKMPMHSHVQAPDAREEDIVLEGQQSLPSQTSDWSRYSNSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRTQSNDTSLDSGVDMNEHQSSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHILEGGSGVIIEHPGEESPGRKSTVEDFEANTSPTKKRGRPPPLAKRDSKTNIWKKREERPLIPLN", "length": 825 }, "evidence": [ { "id": "I3LET1", "url": "https://omabrowser.org/oma/group/I3LET1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P995-1", "protein_name": "Protein FAM171B", "gene_name": "FAM171B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARLCRRVPCTLLLGLAVVLLKARLVPAAARAELSRSDLSLIQQQQQQQQQQQQQQKQLEEAEEERTEVPGATSTLTVPVSVFMLKVQVNDIISRQYLSQAVVEVFVNYTKTNSTVTKSNGAVLIKVPYKLGLSLTIIAYKDGYVLTPLPWKTRRMPIYSSVTLSLFPQSQANIWLFEDTVLITGKLADAKSQPSVQFSKALIKLPDNHHISNVTGYLTVLQQFLKVDNFLHTTGITLNKPGFENIELTPLAAICVKIYSGGKELKVNGSIQVSLPLLRLNDISAGDRIPAWTFDMNTGAWVNHGRGMVKEHNNHLIWTYDAPHLGYWIAAPLPGTRGSGINEDSKDITAYHTVFLTAILGGTIVIVIGFFAVLLCYCRDKCGTPQKRERNITKLEVLKRDQTTSTTHINHISTVKVALKAEDKSQLFNAKNSSYSPQKKEPSKAETEERVSMVKTRDDFKIYNEDVSFLSVNQNNYSRNPTQSLEPNVGSKQPKHINNNLSSSLGDAQDEKRYLTGNEEAYGRSHIPEQLMHIYSQPIAILQTSDLFSTPEQLHTAKSATLPRKGQLVYGQLMEPVNRENFTQTLPKMPIHSHAQPPDAREEDIILEGQQSLPSQASDWSRYSSSLLESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVRHSFIDLKKGKRTQSNDTSLDSGVDMNELHSSRKLEREKTFIKSMHQPKILYLEDLDLSSSESGTTVCSPEDPALRHILDGGSGVIMEHPGEESPGRKSTVEDFEANTSPTKRRGRPPLAKRDSKTNIWKKREERPLIPIN", 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"IPR054151", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054151", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12133", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12133", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12133:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12133:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08704", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08704", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21985", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21985", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "55392", "url": "https://www.rhea-db.org/rhea/55392", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31", "database": 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} ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" }, { "name": "tRNA (m1A) methyltransferase complex", "id": "GO:0031515", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031515", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" }, { "name": "tRNA methylation", "id": "GO:0030488", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030488", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" }, { "name": "mitochondrial tRNA processing", "id": "GO:0090646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090646", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "rRNA (adenine) methyltransferase activity", "id": "GO:0016433", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016433", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" }, { "name": "mRNA (adenine-N1-)-methyltransferase activity", "id": "GO:0061953", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061953", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" }, { "name": "tRNA (adenine(58)-N1)-methyltransferase activity", "id": "GO:0160107", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160107", "evidence": [ { "database": "UniProtKB", "id": "I3LF31", "url": "https://www.uniprot.org/uniprotkb/I3LF31" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "55392", "name": "", "equation": "an adenosine in mRNA + S-adenosyl-L-methionine = an N(1)-methyladenosine in mRNA + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "55392", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/55392" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LF31-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 469, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LF31-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LF31" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LF31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF31" }, { "id": "PF21985", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21985" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TR61B FKBP-like", "eco_id": "ECO_0000259", "start_pos": 146, "end_pos": 198, "start_aa": "Gly", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LF31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF31" }, { "id": "PF08704", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08704" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61 C-terminal", "eco_id": "ECO_0000259", "start_pos": 205, "end_pos": 459, "start_aa": "Arg", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 173, "end_pos": 175 }, { "start_pos": 354, "end_pos": 356 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LF34-1", "uniprot_ac": "I3LF34", "uniprot_id": "I3LF34_PIG", "mass": { "chemical_mass": 44585.0, "monoisotopic_mass": 44585.0 }, "refseq": { "ac": "XP_020919634", "name": "tRNA (cytosine(38)-C(5))-methyltransferase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919634" }, "gene_names": [ { "name": "TRDMT1", "type": "recommended", "evidence": [ { "id": "I3LF34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ] }, { "name": "TRDMT1", "type": "synonym", "evidence": [ { "id": "XP_020919634", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919634" } ] }, { "name": "dnmt2", "type": "synonym", "evidence": [ { "id": "XP_020919634", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919634" } ] } ], "protein_names": [ { "name": "tRNA (cytosine(38)-C(5))-methyltransferase", "type": "recommended", "evidence": [ { "id": "I3LF34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF34/entry#names_and_taxonomy" } ] }, { "name": "2.1.1.204", "type": "synonym", "evidence": [ { "id": "I3LF34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF34/entry#names_and_taxonomy" } ] }, { "name": "DNA (cytosine-5)-methyltransferase-like protein 2", "type": "synonym", "evidence": [ { "id": "I3LF34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF34/entry#names_and_taxonomy" } ] }, { "name": "DNA methyltransferase 2", "type": "synonym", "evidence": [ { "id": "XP_020919634", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919634" } ] }, { "name": "tRNA (cytosine(38)-C(5))-methyltransferase", "type": "synonym", "evidence": [ { "id": "XP_020919634", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919634" } ] } ], "function": [ { "annotation": "Specifically methylates cytosine 38 in the anticodon loop of tRNA(Asp). Has higher activity on tRNA(Asp) modified with queuosine at position 34.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R9K4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9K4#function" }, { "database": "UniProtKB", "id": "ARBA00060360", "url": "https://www.uniprot.org/uniprotkb/ARBA00060360#function" }, { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TRDMT1", "url": "https://www.uniprot.org/uniprotkb/I3LF34", "locus": { "chromosome": "10", "start_pos": 43434444, "end_pos": 43493892, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021309", "url": "https://www.ensembl.org/id/ENSSSCG00000021309" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021309", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021309", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00315", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00315", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100302362", "url": "https://www.ncbi.nlm.nih.gov/gene/100302362", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001525", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001525", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031303", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031303", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050750", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050750", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HYAFKYA", "url": "https://omabrowser.org/oma/group/HYAFKYA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46098", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46098", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46098:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46098:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00145", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00145", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020919634", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919634", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "42956", "url": "https://www.rhea-db.org/rhea/42956", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R9K4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9K4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9K4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9K4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF34-1", "url": "https://www.uniprot.org/uniprotkb/I3LF34-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGVTLEEFDRLSFNMVLMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPFPFQAPGQVLMEFPQMESEHPQKHAIDAQSKIEEKKIERNICLDSSAQCSGKEAILFKLETAGEIDRKHQQDSDLSVQMLKGFLEDDIDMNSYFLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEGTGSVLQTSEDVQIENIYKSLTSLSPEEKIMKLLMLKLRFFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE", "length": 391, "header": "tr|I3LF34-1|I3LF34_PIG Isoform 1 of tRNA (cytosine(38)-C(5))-methyltransferase OS=Sus scrofa OX=9823 GN=TRDMT1 PE=3 SV=2 CANONICAL=I3LF34-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R9K4-1", "url": "https://www.uniprot.org/uniprotkb/I3LF34/entry#A0A5G2R9K4-1", "sequence": { "sequence": "MEPLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGVTLEEFDRLSFNMVLMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPFPFQAPGQVLMEFPQMESEHPQKHAIDAQSKIEEKKIERNICLDSSAQCSGKEAILFKLETAGEIDRKHQQDSDLSVQMLKGFLEDDIDMNSYFLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEGTGSVLQTSEDVQIENIYKSLTSLSPEEKIMKLLMLKLRFFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILWFQYSIISK", "length": 398, "header": "tr|A0A5G2R9K4-1|A0A5G2R9K4_PIG Computationally mapped isoform of tRNA (cytosine(38)-C(5))-methyltransferase OS=Sus scrofa OX=9823 GN=TRDMT1 PE=3 SV=1 CANONICAL=I3LF34-1" }, "locus": { "chromosome": "10", "start_pos": 43491083, "end_pos": 43434558, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071118.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071118.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067280.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067280.1" } ] } }, { "isoform_ac": "I3LF34-1", "url": "https://www.uniprot.org/uniprotkb/I3LF34/entry#I3LF34-1", "sequence": { "sequence": "MEPLRVLELYSGIGGMHQALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGVTLEEFDRLSFNMVLMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPFPFQAPGQVLMEFPQMESEHPQKHAIDAQSKIEEKKIERNICLDSSAQCSGKEAILFKLETAGEIDRKHQQDSDLSVQMLKGFLEDDIDMNSYFLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEGTGSVLQTSEDVQIENIYKSLTSLSPEEKIMKLLMLKLRFFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE", "length": 391, "header": "tr|I3LF34-1|I3LF34_PIG Isoform 1 of tRNA (cytosine(38)-C(5))-methyltransferase OS=Sus scrofa OX=9823 GN=TRDMT1 PE=3 SV=2 CANONICAL=I3LF34-1" }, "locus": { "chromosome": "10", "start_pos": 43491083, "end_pos": 43434609, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030385.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030385.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022674.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022674.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XGQ3-1", "protein_name": "tRNA aspartic acid methyltransferase 1", "gene_name": "TRDMT1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAALRVLELYSGIGGMHQALKESCICAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKCPKYLLLENVKGFESSSARNELLRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFFFHVPGQILTRLPDQNLEELSKDKVVDKTGSSFPSGEKSLDSNTSPDCSSKKGPLPKGAFLFKLETAEQMVRKHRQDNDPSIQMLEDFLEEENEEMSQYFLAPKSLVRYAFLLDIVKPTCRRSTCFTKGYGHYVEGTGSVLQTAVDVELESVFKHIENLTEEEKLMKLSTLKLRYFTPREIANLHGFPPEFGMCSQSTHFYFILQLCQCSFLLGVMCAFYFASFFLTILTIQHFCLVFTNWLTFL", "length": 419 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7K7C6-1", "protein_name": "tRNA (Cytosine(38)-C(5))-methyltransferase isoform X1", "gene_name": "Trdmt1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEPLRVLELYSGIGGMHHALRESCIPAHVVAAIDVNTVANEVYKHNFPHTHLLAKTIEGISLEEFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQHQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLPFQAPDQILMEFPKIATIQTQSYAVVAENTLRVKRPEPSTCFDSSSTQYSRKDSILFKLETAEEIDRKHQQDNDLSVQMLKDFLEDEDTSQYFLPPKLLLRYALLLDIVKPTSRRSMCFTKGYGSYIEGTGSVLQTAEDVQIENVFKSLNDLPPEEKIAKLSTLKLRYFTPREIANLQGFPPEFVDQVCFLKTQVVLETHDPPASALQYWITGCTSRLS", "length": 393 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F4JWT7-1", "protein_name": "tRNA (cytosine(38)-C(5))-methyltransferase 2", "gene_name": "DNMT2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAEQELQRINEKKPWQVLEFYSGIGGMRYSLMASGIVSEVVEAFEINDSANDVYQHNFKHRPYQGNIQSLTAADLDKYNADAWLLSPPCQPYTRQGLQKHSGDARAFSFLRILELIPHTTKPPQMLFVENVVGFETSDTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHSNNKLLWSPDPLYGRDDQVEFGKCQAEEGLDKLLEFCKPVEKFLELAAHVDGEPSSVDDSENGSKDCCGQEGDSVPDSVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKIKGKESCLKEQRLRYFTPREVANFHSFPEDFEFPKHISLRQRYAMLGNSLSVAVVAPLLRYLFDS", "length": 383 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O14717-1", "protein_name": "tRNA (cytosine(38)-C(5))-methyltransferase", "gene_name": "TRDMT1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE", "length": 391 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O55055-1", "protein_name": "tRNA (cytosine(38)-C(5))-methyltransferase", "gene_name": "Trdmt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNFPHTHLLSKTIEGISLEDFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPGQILMEFPKIVTVEPQKYAVVEESQPRVQRTGPRICAESSSTQSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLDIVKPTSRRSMCFTKGYGSYIEGTGSVLQAAEDAQIENIYKSLPDLPPEEKIAKLSMLKLRYFTPKEIANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVLCEGFGNASESCHKMPLILDSNSKILS", "length": 415 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q4G073-1", "protein_name": "tRNA (cytosine(38)-C(5))-methyltransferase", "gene_name": "Trdmt1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPLRVLELYSGIGGMHHALRESRVPAHVVAAIDVSTVANEVYKHNFPHTHLLAKTIEGISLEEFDKLSFNMILMSPPCQPFTRIGLQGDMSDRRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTMEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLCFQAPGQILMEFPNSGTVQPQEYAVVEEGKLRVRTREPDVCLDSSSTQCSGQDSILFKHETAADIDRKRQQDSDLSVQMLKGFLEDGDTAQYLLPAKSLLRYALLLDIVKPTSRRSMCFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLPDLPPEEKIAKLSMLKLRYFTPKEIANLLGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVSKLLTVLCE", "length": 391 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q54JH6-1", "protein_name": "DNA (cytosine-5)-methyltransferase", "gene_name": "dnmA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEQLRVLEFYSGIGGMHYGLQESGVDFQVIQSFDINTNANLNYKYTFNEDSSQKSIESYSVEELEGFKANAWLMSPPCQPFTRLGLQKDDQDNRTNSFFHLLDVLTKIKDPPTYILIENVFGFAKKGSSNTRDHLLDTLIKMNYSFQEFHLSPQQFGLANQRLRYFCIAKRNGKLNFKKEQDKHNEKVDENKLNNNSNNNNEQNKYDNLKILDHIPGYDFHTTLEECDEISNYFDKDLTDDELYEKYKVPHNLLLSKGMLFDIKQKDSKTSNCVTKSYGKFIEGTGSIIQMDNNFKADINDNKSLIPLKLRYFSPKEITRLHGFPEEFKFSPKLTTIQCYRLIGNSLNVKIVSELLKVLVSPNEEEEQQEQQKEKEGKK", "length": 379 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q7YS61-1", "protein_name": "tRNA (cytosine(38)-C(5))-methyltransferase", "gene_name": "TRDMT1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEPLRALELYSGIGGMHQALRESCIPAQVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFLHILDILPRLQKLPKYILLENVKGFEMSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQVLMEFPKTESEHPPKYAINAEKKTEEKKTGPKICFDSSTQCSGKEAILFKLETAGEIDRKHQQDSDLSVRMLKDFLEDDIDKHSFFLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQLRFFTPKEIANLLGFPPEFGFPEMTTVKQRYRLLGNSLNVHVVAKLIKILCD", "length": 391 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9VKB3-1", "protein_name": "tRNA (cytosine(38)-C(5))-methyltransferase", "gene_name": "Mt2", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MVFRVLELFSGIGGMHYAFNYAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIARKGADFPFAGGKIWEEMPGAIAQNQGLSQIAEIVEENVSPDFLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDESHRIFELVKEIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPPETTNRQKYRLLGNSINVKVVGELIKLLTIK", "length": 345 }, "evidence": [ { "id": "I3LF34", "url": "https://omabrowser.org/oma/group/I3LF34/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "tRNA (cytidine-5-)-methyltransferase activity", "id": "GO:0016428", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016428", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "tRNA processing", "id": "GO:0008033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008033", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "pmid": "" }, { "name": "tRNA modification", "id": "GO:0006400", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006400", "evidence": [ { "database": "UniProtKB", "id": "I3LF34", "url": "https://www.uniprot.org/uniprotkb/I3LF34" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "42956", "name": "", "equation": "cytidine(38) in tRNA + S-adenosyl-L-methionine = 5-methylcytidine(38) in tRNA + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "42956", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/42956" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LF46-1", "uniprot_ac": "I3LF46", "uniprot_id": "I3LF46_PIG", "mass": { "chemical_mass": 35614.0, "monoisotopic_mass": 35614.0 }, "refseq": { "ac": "XP_020934251", "name": "taste receptor type 2 member 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934251" }, "gene_names": [ { "name": "TAS2R3", "type": "recommended", "evidence": [ { "id": "I3LF46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF46" } ] }, { "name": "TAS2R3", "type": "synonym", "evidence": [ { "id": "XP_020934251", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934251" } ] } ], "protein_names": [ { "name": "Taste receptor type 2", "type": "recommended", "evidence": [ { "id": "I3LF46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF46/entry#names_and_taxonomy" } ] }, { "name": "taste receptor type 2 member 3", "type": "synonym", "evidence": [ { "id": "XP_020934251", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934251" } ] } ], "function": [ { "annotation": "Gustducin-coupled receptor implicated in the perception of bitter compounds in the oral cavity and the gastrointestinal tract. Signals through PLCB2 and the calcium-regulated cation channel TRPM5.", "evidence": [ { "database": "UniProtKB", "id": "I3LF46", "url": "https://www.uniprot.org/uniprotkb/I3LF46#function" }, { "database": "UniProtKB", "id": "ARBA00025304", "url": "https://www.uniprot.org/uniprotkb/ARBA00025304#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LF46", "url": "https://www.uniprot.org/uniprotkb/I3LF46" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TAS2R3", "url": "https://www.uniprot.org/uniprotkb/I3LF46", "locus": { "chromosome": "18", "start_pos": 8141030, "end_pos": 8141980, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028394", "url": "https://www.ensembl.org/id/ENSSSCG00000028394" } ] } } ], "crossref": [ { "id": "I3LF46", "url": "https://alphafold.ebi.ac.uk/entry/I3LF46", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd15020", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15020", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621051", "url": "https://www.ncbi.nlm.nih.gov/gene/100621051", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007960", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007960", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621051", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621051", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IDIFWTF", "url": "https://omabrowser.org/oma/group/IDIFWTF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LF46", "url": "https://www.orthodb.org/?gene=I3LF46", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11394:SF49", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11394:SF49", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05296", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05296", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-418594", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-418594", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-420499", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-420499", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9717207", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9717207", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020934251", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934251", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LF46", "url": "https://www.uniprot.org/uniprotkb/I3LF46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF46-1", "url": "https://www.uniprot.org/uniprotkb/I3LF46-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGFTEWGFLILTVTEFILGMLGNGFIGLVSGSSWFKNKRISLSDFILTNLALSRIVLLCILLVDGVLMVFSPKLHDEGIVMQIIDISWTFTNHLSIWLATCLSVFYCLKVASFSHPTFLWLKWRVSRVVVWMLLSTLLLSCGSAISLIREFKIYFALSGIGGSGNVTELVRKKRDEYKLIHVLGTLWNLPPLMVSLASYFLLILSLGRHTRRMQQNSTGSGDPSPEAHRRAIKIILSFLFLFLLYFLSFSILSSSYFLPATKTIMRIAEVITMLYPAGHSYVLILGNNKLKQMFVEMLWCEPGHLKPGSKGPFSP", "length": 316, "header": "tr|I3LF46-1|I3LF46_PIG Isoform 1 of Taste receptor type 2 OS=Sus scrofa OX=9823 GN=TAS2R3 PE=3 SV=2 CANONICAL=I3LF46-1" }, "isoforms": [ { "isoform_ac": "I3LF46-1", "url": "https://www.uniprot.org/uniprotkb/I3LF46/entry#I3LF46-1", "sequence": { "sequence": "MSGFTEWGFLILTVTEFILGMLGNGFIGLVSGSSWFKNKRISLSDFILTNLALSRIVLLCILLVDGVLMVFSPKLHDEGIVMQIIDISWTFTNHLSIWLATCLSVFYCLKVASFSHPTFLWLKWRVSRVVVWMLLSTLLLSCGSAISLIREFKIYFALSGIGGSGNVTELVRKKRDEYKLIHVLGTLWNLPPLMVSLASYFLLILSLGRHTRRMQQNSTGSGDPSPEAHRRAIKIILSFLFLFLLYFLSFSILSSSYFLPATKTIMRIAEVITMLYPAGHSYVLILGNNKLKQMFVEMLWCEPGHLKPGSKGPFSP", "length": 316, "header": "tr|I3LF46-1|I3LF46_PIG Isoform 1 of Taste receptor type 2 OS=Sus scrofa OX=9823 GN=TAS2R3 PE=3 SV=2 CANONICAL=I3LF46-1" }, "locus": { "chromosome": "18", "start_pos": 8141980, "end_pos": 8141033, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030179.2", "url": "https://www.ensembl.org/id/ENSSSCT00000030179.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022686.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022686.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LF46", "url": "https://www.uniprot.org/uniprotkb/I3LF46" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621051", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621051", "resource": "KEGG Pathway" }, { "id": "R-SSC-418594", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-418594", "resource": "Reactome", "description": "G alpha (i) signalling events" }, { "id": "R-SSC-420499", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-420499", "resource": "Reactome", "description": "Class C/3 (Metabotropic glutamate/pheromone receptors)" }, { "id": "R-SSC-9717207", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9717207", "resource": "Reactome", "description": "Sensory perception of sweet, bitter, and umami (glutamate) taste" } ], "orthologs": [ { "uniprot_canonical_ac": "Q67ET7-1", "protein_name": "Taste receptor type 2 member 3", "gene_name": "Tas2r3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"Protein Classification", "Other" ] }, { "id": "R-SSC-72165", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72165", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QTV3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTV3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTV3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTV3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF64-1", "url": "https://www.uniprot.org/uniprotkb/I3LF64-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAPETAMFPEKLSHKKYRAALKKEKRKKRRQELARLRDSGLSQKEEEEDAFIEEQQLEEERLLEIERQKLHEEWLLREQKAQEEFRIKKEKEEAARKRQEEQERKLKEEWEEQQRKEREEEQQKLQEKKEREEAVQKMLEQAENELENGATWQNPEPPTELRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALALFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSERRERPGRHEYSRLRRRRSPGPARSYKRNGEAERKRRGSHGAKKSHKHRSKSRERHSSRSRGRKRDRSRGRGSRSRSRSRRSRSHSRSRSQSSSRSRSRGGRRSGSRDRTARPKSE", "length": 477, "header": "tr|I3LF64-1|I3LF64_PIG Isoform 1 of Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 OS=Sus scrofa OX=9823 GN=ZRSR2 PE=4 SV=4 CANONICAL=I3LF64-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QTV3-1", "url": "https://www.uniprot.org/uniprotkb/I3LF64/entry#A0A5G2QTV3-1", "sequence": { "sequence": "MFPEKLSHKKYRAALKKEKRKKRRQELARLRDSGLSQKEEEEEAAVAAVDAFIEEQQLEEERLLEIERQKLHEEWLLREQKAQEEFRIKKEKEEAARKRQEEQERKLKEEWEEQQRKEREEEQQKLQEKKEREEAVQKMLEQAENELENGATWQNPEPPTELRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALALFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSERRERPGRHEYSRLRRRRSPGPARSYKRNGEAERKRRGSHGAKKSHKHRSKSRERHSSRSRGRKRDRSRGRGSRSRSRSRRSRSHSRSRSQSSSRSRSRGGRRSGSRDRTA", "length": 472, "header": "tr|A0A5G2QTV3-1|A0A5G2QTV3_PIG Computationally mapped isoform of Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 OS=Sus scrofa OX=9823 GN=ZRSR2 PE=4 SV=1 CANONICAL=I3LF64-1" }, "locus": { "chromosome": "X", "start_pos": 12365031, "end_pos": 12336721, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077034.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077034.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068278.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068278.2" } ] } }, { "isoform_ac": "I3LF64-1", "url": "https://www.uniprot.org/uniprotkb/I3LF64/entry#I3LF64-1", "sequence": { "sequence": "MAAPETAMFPEKLSHKKYRAALKKEKRKKRRQELARLRDSGLSQKEEEEDAFIEEQQLEEERLLEIERQKLHEEWLLREQKAQEEFRIKKEKEEAARKRQEEQERKLKEEWEEQQRKEREEEQQKLQEKKEREEAVQKMLEQAENELENGATWQNPEPPTELRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALALFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSERRERPGRHEYSRLRRRRSPGPARSYKRNGEAERKRRGSHGAKKSHKHRSKSRERHSSRSRGRKRDRSRGRGSRSRSRSRRSRSHSRSRSQSSSRSRSRGGRRSGSRDRTARPKSE", "length": 477, "header": "tr|I3LF64-1|I3LF64_PIG Isoform 1 of Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 OS=Sus scrofa OX=9823 GN=ZRSR2 PE=4 SV=4 CANONICAL=I3LF64-1" }, "locus": { "chromosome": "X", "start_pos": 12365049, "end_pos": 12336700, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028847.5", "url": "https://www.ensembl.org/id/ENSSSCT00000028847.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022704.4", "url": "https://www.ensembl.org/id/ENSSSCP00000022704.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-72165", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72165", "resource": "Reactome", "description": "mRNA Splicing - Minor Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" }, { "name": "pre-mRNA 3'-splice site binding", "id": "GO:0030628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030628", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" }, { "name": "U12-type spliceosomal complex", "id": "GO:0005689", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005689", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" }, { "name": "U2AF complex", "id": "GO:0089701", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0089701", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" }, { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" }, { "name": "spliceosomal complex assembly", "id": "GO:0000245", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000245", "evidence": [ { "database": "UniProtKB", "id": "I3LF64", "url": "https://www.uniprot.org/uniprotkb/I3LF64" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LF64-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 477, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LF64-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LF64" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LF64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF64" }, { "id": "PS50103", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50103" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C3H1-type", "eco_id": "ECO_0000259", "start_pos": 166, "end_pos": 194, "start_aa": "Glu", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LF64", "database": "UniProtKB", 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"https://www.ebi.ac.uk/interpro/entry/IPR008984", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012568", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012568", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029334", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029334", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "TPNHTDK", "url": "https://omabrowser.org/oma/group/TPNHTDK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR21603", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21603", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21603:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21603:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00498", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00498", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08065", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08065", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15276", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15276", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020929400", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929400", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF70-1", "url": "https://www.uniprot.org/uniprotkb/I3LF70-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGPTRRLVTIKRSGVDGPHFPLSLSSCLFGRAIECDIRIQLPVVSKQHCKIEIRDQEAVLFNFSSTNPTQVNGSAIEKPVPLKHGDVITIVDRSFRYENESDQNGSASAESPGQRREQESSRRASRSSISSNPGGKGQDARVRPKVTEEDVSGRALAHVTKAPEARNVSEDPAARRTPHGVHPSGQAAEDSGKAPDPAAGDAKEDSTVALGSRSGELKALSSMQGLRNGEQGDSPFRRLYESLKVELDVRAASVDGPQSRRKSASQGPRTTGGGSAAAGVQTPGSLTPRPKSGRSPQTKAEPAGGEPGRGRSLEKGSDGEPARSPSLPRTGTQRTRTPTPGRAAQPSPRRRRSEELRVLHGSESPRLGQGQSEGFRADSKAWMPRKFLPRNQTPVKVEEADSFATTPEKFSKKRKSISTNADDLATAVEMQAISAPLVLQAERKNQSDVLNKPEKLGTAAGQMGPGLPGLSSADISGFSDPMKKTEGAPPKRRRVSFGGRLRPELFDENLPPNTPLKRGETPKQRRSLATHTPAALKKIIKEQPQPSGKEDSSETHRETTAQHARVRSPAPPAPHASPAAPDGCRGSAEAPSVSSGSTAPHQTEPPRRGGRKSGSLPLKRASLDRGQHGILQMIYSRRRSGASEANLIVAKSWADVVKLGAKQTQNKAVKRGPPRPLSKKPRRTTPPTKPTDILQNQFSTGHANSPCTIVVGRAHLEKVTGPARPCRILNSFVPHKPMDFGEDLSGLTEMFKTPAKEKPHRMSTCASTFSNPEDLLGKKLLGPHPGEKPLLCTPEIGGGDVSLGPEDSPKEPADRSSESPVLRRPPIRMNESIAKTPRSVSKTKGAEMKSPGSEAELPKAASSANRPRRSSELRGPQTPGPERQAAGSRPHTVQDALGRRLGNTPLAKPELEGERRDSERPFESGKENVESKESSAKTPAGRRSGAASEVKCEPSVDLIPVEALPEPEPPGAAQVDRPGLWQTPARAKEAADAENRAAGTRCKPPGAERAGTTSRRSAQLKTPSRKGDPEGPSVPGKPTETPGATTPVRRAPGDGKSIKLFRETPEQKRIPAEGGTGSKRRPRMPEEKTRPLEDLAGLRELFQTPQHAKDPTAEAKTPGMRCQPPRAAPVFSLDSITGPLKTPPQRADTGDCLSALRQPRQTPGGAGLSYRNPEGGDRGTAGSQEAPEQSLDSAERVTGSKRRPRTPKEKTRPLEDLAGLRELFQTPQHAKDPGTDNKTPKTHCQSPQPEPVNTPSRKGRLKTPSQKGDTDAELSVPRTPRQTPGGAKLLEREPESGDRGAAASREAPEQKLDAAERGTGVQRRPRTPREKAQSLEDLAGFQELFQTPLHTKEPMAIVKTPQVSHISPQPEATATPTNRKRQLRTPLGKVVVGAGGSAPGKTTRALGETPHTHSEPGGGGESIRLFQETPEQKLDAAENAGGSRRRPRTPRERAQSLEDLAGFQELFQTPHHAKDPVTSDKTPTTEPVNTPASGKRGLRTPPQKVGTDAELSAPRKPRQTPEEAGHSDRGPAAEEEDKAFKERLKQKLDSAENVAGEQKRPRRTLREKVPPLEDLAGFQELFQTPRRAKDPVAEDGTPEMPCHASQAAAPVTSTSKTQTSKTPSQKADTRGGLSALRKPRQTPGGTGLSDRRPGGDGGAAASQEAPEQKLDAAERGTVQRWPRTPRGKAQSLEDLAGFQELFQTPLHTKEPMAIVKTPQVSHISLQPEATVTPTNRKRQLRTPLGKVVVEAGGSAPGKTTRALGETPHTHSEPGGGGESIRLFQETPEQKLDAAENAGGSKRRPRTPRERAQSLEDLAGFQELFQTPHHAKDPVTSDKTPKTEPVNTPASGKRGLRTPPQKVEVPEGVSGLRQLRQTPGDTVSSKGGDRGTAGSQEAPEQSLDFVEHITGIKRRPRTPKEKTRPLEDLAGLRELFQTPQHAKDPGTDNKTPKTHCQSPQPEPVNTPSRKGRLKTPSQKGDTDAELSVPRTPRQTPGGAKLLEREPESGDRGAAASREAPEQKLDAAERRTGVQRRPRTPREKTQSLEDLAGFQELFQTPLHTKEPMAIVKTPQVSHISPQPEATVTPTNRKRQLRTPLGKVVVGAGGSAPGKPTRALGETPHTHSEPGGGGESIRLFQETPEQKLDAAENAGGSKRWPRTPRERAQSLEDLAGFQELFQTPHHAKDPVTGDKTPTTEPVNTPASGKRGLRTPPQKVGTDAELSAPRKPRQTPEEAGHSDRGPAAEEEDKAFKKRLKQKLDSAENVAGEQKRPRRTLREKVPPLEDLAGFQELFQTPHRAKDPVADDIPTKMPCTSPPAEPVTRRTTRQRRLRSPPGEVDAEGPSAPRKPTRAARETRPTGSEPAADEKDIAVFKETSGPNLDSADEVVGTKSRLRSRKEKAQPPGAPGSVKEPFPRPDQAKEEVGDVKITAVPCPPPPAGPASRPTRQRRLRSPPGEVDAEGPSAPRRPTRAARETRPTGSEPAADEKDIAVSKRTSGKEFNPAESVSGVKSRLRTSKEKTQPVEDEPSLREPFPKPDQATEEAGEVKIAAAPCPPLPTGPASRPTRQRRLRSPPGEVNAEGPSAPRKPTRAARETRPTGSEPAADEKDIAVFKETLGPNLDSADEVVGTRSRLRSRKGKAQPPGGPGSVKEPFPRPDQAKEEVSDVKITAAPCPPPPAGPASRLTRQKRLRSPPRDVDSEGPSAPRRPTRAARETRTTGSELAADEKDIAVSKRTSGKELNPAESVSGVKSRLRTSKEKTQPVEDEPSLPKPDQATEEAGEVKIAAAPCPPPPAGPASRPTRQRRLRSPPGEVDAEGPSAPRKPTRAARETRPTGSEPAADEKDIAVFKETSGPNLDSADEVVGTKSRLRSHKEKAQPPGGLGSVKEPFPRPEQAKGLGNDAAHVKTALRPTAGRRRPAETSRSDLRASKVRSTEDPGGTSPSESHASPQREQGEAGRASGRKRLRPETAVQEPGDEKPLQKRQRAAPRERGDLPDPLGMKQKSLRVAVQRTEPVGKLPEGDLKTDAAGPGDAAGAPDKGMSLHPRRPNKTDLEEQRPECLPSAEKMRRTRHEKKSVKTSGERALRGREDGAENPTSGGKVQERQVRSRSGGQNKTLSPDAAERKAREKRAEIRLQDQEEKEATEHSGLATGLRSRKTTVRPRGNPSERDSEPRVTPCAKRGAHSLQKEDDNVSVRKIRTRSQKSSGR", "length": 3209, "header": "tr|I3LF70-1|I3LF70_PIG Isoform 1 of Marker of proliferation Ki-67 OS=Sus scrofa OX=9823 GN=MKI67 PE=1 SV=2 CANONICAL=I3LF70-1" }, "isoforms": [ { "isoform_ac": "I3LF70-1", "url": "https://www.uniprot.org/uniprotkb/I3LF70/entry#I3LF70-1", "sequence": { "sequence": "MGPTRRLVTIKRSGVDGPHFPLSLSSCLFGRAIECDIRIQLPVVSKQHCKIEIRDQEAVLFNFSSTNPTQVNGSAIEKPVPLKHGDVITIVDRSFRYENESDQNGSASAESPGQRREQESSRRASRSSISSNPGGKGQDARVRPKVTEEDVSGRALAHVTKAPEARNVSEDPAARRTPHGVHPSGQAAEDSGKAPDPAAGDAKEDSTVALGSRSGELKALSSMQGLRNGEQGDSPFRRLYESLKVELDVRAASVDGPQSRRKSASQGPRTTGGGSAAAGVQTPGSLTPRPKSGRSPQTKAEPAGGEPGRGRSLEKGSDGEPARSPSLPRTGTQRTRTPTPGRAAQPSPRRRRSEELRVLHGSESPRLGQGQSEGFRADSKAWMPRKFLPRNQTPVKVEEADSFATTPEKFSKKRKSISTNADDLATAVEMQAISAPLVLQAERKNQSDVLNKPEKLGTAAGQMGPGLPGLSSADISGFSDPMKKTEGAPPKRRRVSFGGRLRPELFDENLPPNTPLKRGETPKQRRSLATHTPAALKKIIKEQPQPSGKEDSSETHRETTAQHARVRSPAPPAPHASPAAPDGCRGSAEAPSVSSGSTAPHQTEPPRRGGRKSGSLPLKRASLDRGQHGILQMIYSRRRSGASEANLIVAKSWADVVKLGAKQTQNKAVKRGPPRPLSKKPRRTTPPTKPTDILQNQFSTGHANSPCTIVVGRAHLEKVTGPARPCRILNSFVPHKPMDFGEDLSGLTEMFKTPAKEKPHRMSTCASTFSNPEDLLGKKLLGPHPGEKPLLCTPEIGGGDVSLGPEDSPKEPADRSSESPVLRRPPIRMNESIAKTPRSVSKTKGAEMKSPGSEAELPKAASSANRPRRSSELRGPQTPGPERQAAGSRPHTVQDALGRRLGNTPLAKPELEGERRDSERPFESGKENVESKESSAKTPAGRRSGAASEVKCEPSVDLIPVEALPEPEPPGAAQVDRPGLWQTPARAKEAADAENRAAGTRCKPPGAERAGTTSRRSAQLKTPSRKGDPEGPSVPGKPTETPGATTPVRRAPGDGKSIKLFRETPEQKRIPAEGGTGSKRRPRMPEEKTRPLEDLAGLRELFQTPQHAKDPTAEAKTPGMRCQPPRAAPVFSLDSITGPLKTPPQRADTGDCLSALRQPRQTPGGAGLSYRNPEGGDRGTAGSQEAPEQSLDSAERVTGSKRRPRTPKEKTRPLEDLAGLRELFQTPQHAKDPGTDNKTPKTHCQSPQPEPVNTPSRKGRLKTPSQKGDTDAELSVPRTPRQTPGGAKLLEREPESGDRGAAASREAPEQKLDAAERGTGVQRRPRTPREKAQSLEDLAGFQELFQTPLHTKEPMAIVKTPQVSHISPQPEATATPTNRKRQLRTPLGKVVVGAGGSAPGKTTRALGETPHTHSEPGGGGESIRLFQETPEQKLDAAENAGGSRRRPRTPRERAQSLEDLAGFQELFQTPHHAKDPVTSDKTPTTEPVNTPASGKRGLRTPPQKVGTDAELSAPRKPRQTPEEAGHSDRGPAAEEEDKAFKERLKQKLDSAENVAGEQKRPRRTLREKVPPLEDLAGFQELFQTPRRAKDPVAEDGTPEMPCHASQAAAPVTSTSKTQTSKTPSQKADTRGGLSALRKPRQTPGGTGLSDRRPGGDGGAAASQEAPEQKLDAAERGTVQRWPRTPRGKAQSLEDLAGFQELFQTPLHTKEPMAIVKTPQVSHISLQPEATVTPTNRKRQLRTPLGKVVVEAGGSAPGKTTRALGETPHTHSEPGGGGESIRLFQETPEQKLDAAENAGGSKRRPRTPRERAQSLEDLAGFQELFQTPHHAKDPVTSDKTPKTEPVNTPASGKRGLRTPPQKVEVPEGVSGLRQLRQTPGDTVSSKGGDRGTAGSQEAPEQSLDFVEHITGIKRRPRTPKEKTRPLEDLAGLRELFQTPQHAKDPGTDNKTPKTHCQSPQPEPVNTPSRKGRLKTPSQKGDTDAELSVPRTPRQTPGGAKLLEREPESGDRGAAASREAPEQKLDAAERRTGVQRRPRTPREKTQSLEDLAGFQELFQTPLHTKEPMAIVKTPQVSHISPQPEATVTPTNRKRQLRTPLGKVVVGAGGSAPGKPTRALGETPHTHSEPGGGGESIRLFQETPEQKLDAAENAGGSKRWPRTPRERAQSLEDLAGFQELFQTPHHAKDPVTGDKTPTTEPVNTPASGKRGLRTPPQKVGTDAELSAPRKPRQTPEEAGHSDRGPAAEEEDKAFKKRLKQKLDSAENVAGEQKRPRRTLREKVPPLEDLAGFQELFQTPHRAKDPVADDIPTKMPCTSPPAEPVTRRTTRQRRLRSPPGEVDAEGPSAPRKPTRAARETRPTGSEPAADEKDIAVFKETSGPNLDSADEVVGTKSRLRSRKEKAQPPGAPGSVKEPFPRPDQAKEEVGDVKITAVPCPPPPAGPASRPTRQRRLRSPPGEVDAEGPSAPRRPTRAARETRPTGSEPAADEKDIAVSKRTSGKEFNPAESVSGVKSRLRTSKEKTQPVEDEPSLREPFPKPDQATEEAGEVKIAAAPCPPLPTGPASRPTRQRRLRSPPGEVNAEGPSAPRKPTRAARETRPTGSEPAADEKDIAVFKETLGPNLDSADEVVGTRSRLRSRKGKAQPPGGPGSVKEPFPRPDQAKEEVSDVKITAAPCPPPPAGPASRLTRQKRLRSPPRDVDSEGPSAPRRPTRAARETRTTGSELAADEKDIAVSKRTSGKELNPAESVSGVKSRLRTSKEKTQPVEDEPSLPKPDQATEEAGEVKIAAAPCPPPPAGPASRPTRQRRLRSPPGEVDAEGPSAPRKPTRAARETRPTGSEPAADEKDIAVFKETSGPNLDSADEVVGTKSRLRSHKEKAQPPGGLGSVKEPFPRPEQAKGLGNDAAHVKTALRPTAGRRRPAETSRSDLRASKVRSTEDPGGTSPSESHASPQREQGEAGRASGRKRLRPETAVQEPGDEKPLQKRQRAAPRERGDLPDPLGMKQKSLRVAVQRTEPVGKLPEGDLKTDAAGPGDAAGAPDKGMSLHPRRPNKTDLEEQRPECLPSAEKMRRTRHEKKSVKTSGERALRGREDGAENPTSGGKVQERQVRSRSGGQNKTLSPDAAERKAREKRAEIRLQDQEEKEATEHSGLATGLRSRKTTVRPRGNPSERDSEPRVTPCAKRGAHSLQKEDDNVSVRKIRTRSQKSSGR", "length": 3209, "header": "tr|I3LF70-1|I3LF70_PIG Isoform 1 of Marker of proliferation Ki-67 OS=Sus scrofa OX=9823 GN=MKI67 PE=1 SV=2 CANONICAL=I3LF70-1" }, "locus": { "chromosome": "14", "start_pos": 137295585, "end_pos": 137268155, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029353.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029353.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022710.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022710.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 339, "start_aa": "Thr", "end_pos": 339, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr339", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D4A0Y6-1", "protein_name": "Marker of proliferation Ki-67", "gene_name": "Mki67", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASSARLVTIKRSGDDGAHFPLSLSSCLFGRSIECDIRIQLPVVSKKHCKIEVKEQEAILYNFSSANPTQVNGTIINEPVQLKHGDIITIIDRSFRYEDGSHDGSRPTEFPRKSLGKEPARRASRDTISADPDGKDQDTKASKMTASRRSFVYAKGLSADSPASDDSKDSVTQDSSGHVEQHDRRNLGEPTSGDLFKKFRATRSSYGDLKSSPAQSLSNSNKNESPFEKLYQSMKEELDVKSEKSHRKSEPQFDRAAEESWETERLVSCKARPKSSRSTPVTATSSPKVGKSWTERWRGGVGPVQTPTETAKMKTPVQKAQQLKDEDSRVPGRRNSVNLDESESAQAVHKIVTPGKLVTRNQAAVKVGHVASPANTPEHSSSKKRRSIPADMEVPCAETQKRLSLTQCLAPGEKKSPKDSFSKPEKLGTVAKQTCSGITGLSSIDISNCGDSINKSEGVPLKRRRVSFGGHLRPELFDENLPPNTPLKRGETPTKRKSLGTHSPAGLKKIIKERPPSPGKQESPGVTPPRTNDERRRSGRTSLASSGSKFLYETDIPKKAGRKSGNLPAKRASISRSQHGILQMICSKRRSGASEANLIVAKSWADVVKLGVKQTQMKVVKHVPQKQTRKRQRRPSTPKKPTSSLHDQFTTGHANSPCTIVIGRAQTEKASMPARPYKMLNNLMLNWKMDFSEDLSGLTEMFKTPVKEKQQQMSDVGSILSDSENLSERQLQGTNSEDTPPPTASEILGEKVLLSTQNAAKQQSNKYSASSTLRRQSIKHENTVQTPKNVHNITQIEKKTPASETEPLKTASSMSKLRRSRELRHTLVKSKNEKTEAVLAKSITGRHLRKTFQGQEVDQQVQGSENSSQRCEENSKLSEDSEKTSARRSSARKQKLTKDLVGSQMVTQSADCAEDLLSQEQGTIQNLEESMYTQNTSKSDQGVAKQKVNTVVDATRVKRWSKTPVKMTHPLEGAADFTEHFETPDLKDEPIGDDETKVLCKSPQPKTENLKASAKPRTSTSRRKVDRKEELSAVTKLIHMSGESTPAPAQEDNDTTTFMETPKQKLDFTGNSTGHKRRSQASKNRAQPLEDLDGFQELFQTPAAARTPVTVDESAKVSLESVQPQLVITSASTKRLSKTGLSKVDVREEPSTLGKRTKSSDTVTGTPAPVQEENNTMAFMQTPKQKLDFTGNSTGHKRRSRASKNRAQPLEDLDGFQELFQTPAAASDPVTVDESAKVSLESVQPQLVITPASTKRLSKTGLSKVDVREEPSTLGKRTKSSDTVTGTPAPVQEENNTTAFMQTPKQKLDFTGNSTGHKRRSRASKNRAQPLEDLDGFQELFQTPAAASDPVTVDESAKVSLESVQPQLVITPASTKRLSKTGLSKVDVREEPSTLGKRTKSSDTVTGTPAPVQDENNTTAFMQTPKQKLDFTGNSTGHKRRSRASKNRAQPLEDLDGFQELFQTPAAASDPVTVDESAKVSLESVQPQLVITPASTKRLSKTGLSKVDVREEPSTLGKRTKSSDTVTGTPAPVQEENNTMAFMQTPKQKLDFTGNSTGHKRRSRASKNRAQPLEDLDGFQELFQTPAAASDPVTVDESAKVSLESVQPQLVITPASTKRLSKTGLSKVDVREEPSTLGKRRKSSDTVTGTPAPVQDENNTMAFMQTPKQKLDFTGNSTGHKRRSRASKNRAQPLEDLDGFQELFQTPAAASDPVTVDESAKVSLESVQPQLVITPASTKRLSKTGLSKVDVREEPSTLGKRTKSSDTVTGTPAPVQDENNTTAFMQTPKQKLDFTGNSTGHKRRSRASKNRAQPLEDLDGFQELFQTPAAASDPVTVDESAKVSLESVQPQLVITPASTKRLSKTGLSKVDVREEPSTLGKRTKSSGRVTGTPAPVQEENNTTTFMETPKQKLESLGDLTGLRKQSRTPKAKAQYLEDISGFQEGFQTPDHANGPLAVGKTKKMSFISPQPGSAITLKSIERQSRASMSNMNVKEELLESEEHLQLGEGIDTLQVPNNNKVFRSSRKPAKRKLDPTASMPSSKRMRRSSKDSTPSLEDVTGSQQLCQMPGHAKDSLNTEASTMFTKPPQSGPVRTQNNRKSLPKISLRQVDVTGGISVLGKQSPGRALTAPVQADNGIKAIMETPKETLATAADLTGFTRPQQTPKEKDQPLEDYGGFQELFQTPAGASDSVTVEESKKMPVESLQPQPVRTPASTKRLSKTGLSKVDVREEPSTPGKRTKSSDTVTGTPAPVPEENDTTPFMQTPKQKLEFTGNSAGHKRRSRTPKTRAQPLEDLDGFQELFQTPAGASDPVTVDESTKVSLESSQPLPVITPASTKRLSKTPGQNKDLVTLDNLAKMPGSSPPPEPIDTSVISGRQLRTRLRNLYVKNELSEDGMHPKMSGEIVDSSRAPGGEEKVIKARKQCVKRKLDTAVNLPSSKRQRIAGAEEPQTLEDLPGFQELCQAPCLVMDSVIVDKTTKVPSKSPEPVDTTSEIKPRRRLKRLGVTEEPIPQRTTTRVLRQTRNTHKEPIDSSNGVDEFKESSAQKQDPAISLTGRRNQPRKVKEKTQPLEELTSFQEEIATRMSCKSPQPEEKKTLVGLKKQLRIQLFKVGVEEEPTAQRKQPARETRSRLKEPMGNRINVEELKKSTEQKIDPVASMTVSKRPRRIPKEKAQTVELAGLKGPIQTLGHTEESARDKEPTQMPCNSLQPEQVDSLQPSPRRPRTRHGKVEADKPSAVRKTVPTSRQSVRSRKVTEIDDNGTKASKAPVKQTLDTVAKETDSKRQLRTRKNGVQPLEVLGDSKEITQISDHSEKLRHDTNILKSTLQQKPDSMKPLRKCRRVLRTSKEDPKEVLMDTSDLAALQSKSNLYLSPPRKSARDGRILKTRTLCSVTPKQEATGEKPVHKKQRAASTKRQVSPEPVKVKHLRSVSHKRESVEEHISTIMQIEEMEAKRENPVTPDQSSRYRKKTEKQPSPKFDASAEKVGIKKNEKTMKISQETEPQNPDPGTKKSSSLGKVSGKRTCLRSRGQTEIPQPHEAEEKTRKSGAEISIKTQQEKGVSGDPDVRRLRSRQTRVTLDNEPKPRVTRGAKKDAKTLKKDEDIVYTKILRTRSHQKSETV", "length": 3121 }, "evidence": [ { "id": "I3LF70", "url": "https://omabrowser.org/oma/group/I3LF70/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E9PVX6-1", "protein_name": "Proliferation marker protein Ki-67", "gene_name": "Mki67", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSAHLVTIKRSGDDGAHFPLSLSSCLFGRSIECDIRIQLPVVSKRHCKIEVKEQEAILYNFSSTNPTQVNGVTIDEPVRLRHGDIITIIDRSFRYEDGNHEDGSKPTEFPGKSLGKEPSRRASRDSFCADPDGEGQDTKASKMTASRRSFVYAKGLSADSPASDGSKNSVSQDSSGHVEQHTGRNIVEPTSGDLFKKSRSTGSSYREPKSSPTQSLSNSNEKESPFEKLYQSMKEELDVKSQKSCRKSEPQPDRAAEESRETQLLVSGRARAKSSGSTPVTAASSPKVGKIWTERWRGGMVPVQTSTETAKMKTPVRHSQQLKDEDSRVTGRRHSVNLDEGESAQAVHKTVTPGKLATRNQAAVEAGDVASPADTPEHSSSKKRSIPAKVEAPSAETQKRLSLTQRLVPGEKKTPKGSFSKPEKLATAAEQTCSGLPGLSSVDISNFGDSINKSEGMPMKRRRVSFGGHLRPELFDENLPPNTPLKRGETPTKRKSLGTHSPAVLKTIIKERPQSPGKQESPGITPPRTNDQRRRSGRTSSGSKFLCETDIPKKAGRKSGNLPAKRASISRSQHGILQMICSKRRSGASEANLIVAKSWADVVKLGVKQTQTKVAKHVPQKQTSKRQRRPSTPKKPTSNLHNQFTTGHANSPCTIVVGRAQIEKVSVPARPYKMLNNLMLNRKVDFSEDLSGLTEMFKTPVKEKQQQMSDTGSVLSNSANLSERQLQVTNSGDIPEPITTEILGEKVLSSTRNAAKQQSDRYSASPTLRRRSIKHENTVQTPKNVHNITDLEKKTPVSETEPLKTASSVSKLRRSRELRHTLVETMNEKTEAVLAENTTARHLRGTFREQKVDQQVQDNENAPQRCKESGELSEGSEKTSARRSSARKQKPTKDLLGSQMVTQTADYAEELLSQGQGTIQNLEESMHMQNTSISEDQGITEKKVNIIVYATKEKHSPKTPGKKAQPLEGPAGLKEHFETPNPKDKPITEDRTRVLCKSPQVTTENITTNTKPQTSTSGKKVDMKEESSALTKRIHMPGESRHNPKILKLECEDIKALKQSENEMLTSTVNGSKRTLEKSKKKAQPLEDLTCFQELFISPVPTNIIKKIPSKSPHTQPVRTPASTKRLSKTGLSKVDVRQEPSTLGKRTKSPGRAPGTPAPVQEENDSTAFMETPKQKLDFAGNSSGSKRRSRTSKNRSQPLEDLDGFQELFQTPAGASDSVTVEESAKISLESSQAEPVKTPASTKRRSKMSLMKVDMKELSILEKQTQSRGRDAGTPAPMQEGNGTTAIMETPKQKLDFTGNSTGHKRRPRTPKIRAQPLEDLDGFQELFQTPAGANDSVTVEESAKMSLESSQAEPVKTPASTKRLSKTDLSKVDVREDPSILGKKTKSPGRAPGTPAPVQEENDCTAYMETPKQKLESIENLTGLRKQSRTPKDITGFQDSFQIPDHANGPLVVVKTKKMFFNSPQPESAITRKSRERQSRASISKIDVKEELLESEEHLQLGEGVDTFQVSTNKVIRSSRKPAKRKLDSTAGMPNSKRMRCSSKDNTPCLEDLNGFQELFQMPGYANDSLTTGISTMLARSPQLGPVRTQINKKSLPKIILRKMDVTEEISGLWKQSLGRVHTTQEQEDNAIKAIMEIPKETLQTAADGTRLTRQPQTPKEKVQPLEDHSVFQELFQTSRYCSDPLIGNKQTRMSLRSPQPGFVRTPRTSKRLAKTSVGNIAVREKISPVSLPQCATGEVVHIPIGPEDDTENKGVKESTPQTLDSSASRTVSKRQQGAHEERPQFSGDLFHPQELFQTPASGKDPVTVDETTKIALQSPQPGHIINPASMKRQSNMSLRKDMREFSILEKQTQSRGRDAGTPAPMQEENGTTAIMETPKQKLDFIGNSTGHKRRPRTPKNRAQPLEDLDGFQELFQTPAGASDPVSVEESAKISLASSQAEPVRTPASTKRRSKTGLSKVDVRQEPSTLGKRMKSLGRAPGTPAPVQEENDSTAFMETPKQKLDFTGNSSGHKRRPQTPKIRAQPLEDLDGFQELFQTPAGANDSVTVEESVKMSLESSQAEPVKTPASTKRLSKTGLSKVDVREDPSILEKKTKSPGTPAPVQEENDCTAFMETPKQKLDFTGNSSGHKRRPRTPKIRAQPLEDLDGFQELFQTPAGASDSVTVEESAKMSLESSQAKPVKTPASTKRLSKTGLSKVDVREDPSTLGKKTKSPGRAPGTPAPVQEENDSTAFMETPKQKLDFAENSSGSKRRSRTSKNRSQPLEDLDGFQELFQTPAGASNPVSVEESAKISLESSQAEPVRTRASTKRLSKTGLNKMDVREGHSPLSKSSCASQKVMQTLTLGEDHGRETKDGKVLLAQKLEPAIYVTRGKRQQRSCKKRSQSPEDLSGVQEVFQTSGHNKDSVTVDNLAKLPSSSPPLEPTDTSVTSRRQARTGLRKVHVKNELSGGIMHPQISGEIVDLPREPEGEGKVIKTRKQSVKRKLDTEVNVPRSKRQRITRAEKTLEDLPGFQELCQAPSLVMDSVIVEKTPKMPDKSPEPVDTTSETQARRRLRRLVVTEEPIPQRKTTRVVRQTRNTQKEPISDNQGMEEFKESSVQKQDPSVSLTGRRNQPRTVKEKTQPLEELTSFQEETAKRISSKSPQPEEKETLAGLKRQLRIQLINDGVKEEPTAQRKQPSRETRNTLKEPVGDSINVEEVKKSTKQKIDPVASVPVSKRPRRVPKEKAQALELAGLKGPIQTLGHTDESASDKGPTQMPCNSLQPEQVDSFQSSPRRPRTRRGKVEADEEPSAVRKTVSTSRQTMRSRKVPEIGNNGTQVSKASIKQTLDTVAKVTGSRRQLRTHKDGVQPLEVLGDSKEITQISDHSEKLAHDTSILKSTQQQKPDSVKPLRTCRRVLRASKEDPKEVLVDTRDHATLQSKSNPLLSPKRKSARDGSIVRTRALRSLAPKQEATDEKPVPEKKRAASSKRHVSPEPVKMKHLKIVSNKLESVEEQVSTVMKTEEMEAKRENPVTPDQNSRYRKKTNVKQPRPKFDASAENVGIKKNEKTMKTASQETELQNPDDGAKKSTSRGQVSGKRTCLRSRGTTEMPQPCEAEEKTSKPAAEILIKPQEEKGVSGESDVRCLRSRKTRVALDSEPKPRVTRGTKKDAKTLKEDEDIVCTKKLRTRS", "length": 3177 }, "evidence": [ { "id": "I3LF70", "url": "https://omabrowser.org/oma/group/I3LF70/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P46013-1", "protein_name": "Proliferation marker protein Ki-67", "gene_name": "MKI67", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWPTRRLVTIKRSGVDGPHFPLSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDEPVRLKHGDVITIIDRSFRYENESLQNGRKSTEFPRKIREQEPARRVSRSSFSSDPDEKAQDSKAYSKITEGKVSGNPQVHIKNVKEDSTADDSKDSVAQGTTNVHSSEHAGRNGRNAADPISGDFKEISSVKLVSRYGELKSVPTTQCLDNSKKNESPFWKLYESVKKELDVKSQKENVLQYCRKSGLQTDYATEKESADGLQGETQLLVSRKSRPKSGGSGHAVAEPASPEQELDQNKGKGRDVESVQTPSKAVGASFPLYEPAKMKTPVQYSQQQNSPQKHKNKDLYTTGRRESVNLGKSEGFKAGDKTLTPRKLSTRNRTPAKVEDAADSATKPENLSSKTRGSIPTDVEVLPTETEIHNEPFLTLWLTQVERKIQKDSLSKPEKLGTTAGQMCSGLPGLSSVDINNFGDSINESEGIPLKRRRVSFGGHLRPELFDENLPPNTPLKRGEAPTKRKSLVMHTPPVLKKIIKEQPQPSGKQESGSEIHVEVKAQSLVISPPAPSPRKTPVASDQRRRSCKTAPASSSKSQTEVPKRGGRKSGNLPSKRVSISRSQHDILQMICSKRRSGASEANLIVAKSWADVVKLGAKQTQTKVIKHGPQRSMNKRQRRPATPKKPVGEVHSQFSTGHANSPCTIIIGKAHTEKVHVPARPYRVLNNFISNQKMDFKEDLSGIAEMFKTPVKEQPQLTSTCHIAISNSENLLGKQFQGTDSGEEPLLPTSESFGGNVFFSAQNAAKQPSDKCSASPPLRRQCIRENGNVAKTPRNTYKMTSLETKTSDTETEPSKTVSTANRSGRSTEFRNIQKLPVESKSEETNTEIVECILKRGQKATLLQQRREGEMKEIERPFETYKENIELKENDEKMKAMKRSRTWGQKCAPMSDLTDLKSLPDTELMKDTARGQNLLQTQDHAKAPKSEKGKITKMPCQSLQPEPINTPTHTKQQLKASLGKVGVKEELLAVGKFTRTSGETTHTHREPAGDGKSIRTFKESPKQILDPAARVTGMKKWPRTPKEEAQSLEDLAGFKELFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLTPSAGKAMLTPKPAGGDEKDIKAFMGTPVQKLDLAGTLPGSKRQLQTPKEKAQALEDLAGFKELFQTPGHTEELVAAGKTTKIPCDSPQSDPVDTPTSTKQRPKRSIRKADVEGELLACRNLMPSAGKAMHTPKPSVGEEKDIIIFVGTPVQKLDLTENLTGSKRRPQTPKEEAQALEDLTGFKELFQTPGHTEEAVAAGKTTKMPCESSPPESADTPTSTRRQPKTPLEKRDVQKELSALKKLTQTSGETTHTDKVPGGEDKSINAFRETAKQKLDPAASVTGSKRHPKTKEKAQPLEDLAGLKELFQTPVCTDKPTTHEKTTKIACRSQPDPVDTPTSSKPQSKRSLRKVDVEEEFFALRKRTPSAGKAMHTPKPAVSGEKNIYAFMGTPVQKLDLTENLTGSKRRLQTPKEKAQALEDLAGFKELFQTRGHTEESMTNDKTAKVACKSSQPDPDKNPASSKRRLKTSLGKVGVKEELLAVGKLTQTSGETTHTHTEPTGDGKSMKAFMESPKQILDSAASLTGSKRQLRTPKGKSEVPEDLAGFIELFQTPSHTKESMTNEKTTKVSYRASQPDLVDTPTSSKPQPKRSLRKADTEEEFLAFRKQTPSAGKAMHTPKPAVGEEKDINTFLGTPVQKLDQPGNLPGSNRRLQTRKEKAQALEELTGFRELFQTPCTDNPTTDEKTTKKILCKSPQSDPADTPTNTKQRPKRSLKKADVEEEFLAFRKLTPSAGKAMHTPKAAVGEEKDINTFVGTPVEKLDLLGNLPGSKRRPQTPKEKAKALEDLAGFKELFQTPGHTEESMTDDKITEVSCKSPQPDPVKTPTSSKQRLKISLGKVGVKEEVLPVGKLTQTSGKTTQTHRETAGDGKSIKAFKESAKQMLDPANYGTGMERWPRTPKEEAQSLEDLAGFKELFQTPDHTEESTTDDKTTKIACKSPPPESMDTPTSTRRRPKTPLGKRDIVEELSALKQLTQTTHTDKVPGDEDKGINVFRETAKQKLDPAASVTGSKRQPRTPKGKAQPLEDLAGLKELFQTPICTDKPTTHEKTTKIACRSPQPDPVGTPTIFKPQSKRSLRKADVEEESLALRKRTPSVGKAMDTPKPAGGDEKDMKAFMGTPVQKLDLPGNLPGSKRWPQTPKEKAQALEDLAGFKELFQTPGTDKPTTDEKTTKIACKSPQPDPVDTPASTKQRPKRNLRKADVEEEFLALRKRTPSAGKAMDTPKPAVSDEKNINTFVETPVQKLDLLGNLPGSKRQPQTPKEKAEALEDLVGFKELFQTPGHTEESMTDDKITEVSCKSPQPESFKTSRSSKQRLKIPLVKVDMKEEPLAVSKLTRTSGETTQTHTEPTGDSKSIKAFKESPKQILDPAASVTGSRRQLRTRKEKARALEDLVDFKELFSAPGHTEESMTIDKNTKIPCKSPPPELTDTATSTKRCPKTRPRKEVKEELSAVERLTQTSGQSTHTHKEPASGDEGIKVLKQRAKKKPNPVEEEPSRRRPRAPKEKAQPLEDLAGFTELSETSGHTQESLTAGKATKIPCESPPLEVVDTTASTKRHLRTRVQKVQVKEEPSAVKFTQTSGETTDADKEPAGEDKGIKALKESAKQTPAPAASVTGSRRRPRAPRESAQAIEDLAGFKDPAAGHTEESMTDDKTTKIPCKSSPELEDTATSSKRRPRTRAQKVEVKEELLAVGKLTQTSGETTHTDKEPVGEGKGTKAFKQPAKRKLDAEDVIGSRRQPRAPKEKAQPLEDLASFQELSQTPGHTEELANGAADSFTSAPKQTPDSGKPLKISRRVLRAPKVEPVGDVVSTRDPVKSQSKSNTSLPPLPFKRGGGKDGSVTGTKRLRCMPAPEEIVEELPASKKQRVAPRARGKSSEPVVIMKRSLRTSAKRIEPAEELNSNDMKTNKEEHKLQDSVPENKGISLRSRRQNKTEAEQQITEVFVLAERIEINRNEKKPMKTSPEMDIQNPDDGARKPIPRDKVTENKRCLRSARQNESSQPKVAEESGGQKSAKVLMQNQKGKGEAGNSDSMCLRSRKTKSQPAASTLESKSVQRVTRSVKRCAENPKKAEDNVCVKKIRTRSHRDSEDI", "length": 3256 }, "evidence": [ { "id": "I3LF70", "url": "https://omabrowser.org/oma/group/I3LF70/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70" } ], "pmid": "" }, { "name": "condensed chromosome", "id": "GO:0000793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000793", "evidence": [ { "database": "UniProtKB", "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "chromosome segregation", "id": "GO:0007059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007059", "evidence": [ { "database": "UniProtKB", "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70" } ], "pmid": "" }, { "name": "regulation of mitotic nuclear division", "id": "GO:0007088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007088", "evidence": [ { "database": "UniProtKB", "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70" } ], "pmid": "" }, { "name": "meiotic cell cycle", "id": "GO:0051321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051321", "evidence": [ { "database": "UniProtKB", "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "molecular condensate scaffold activity", "id": "GO:0140693", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140693", "evidence": [ { "database": "UniProtKB", "id": "I3LF70", "url": "https://www.uniprot.org/uniprotkb/I3LF70" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1237, "end_pos": 1239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 167, "end_pos": 169, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1948, "end_pos": 1950, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3050, "end_pos": 3052, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3115, "end_pos": 3117, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3193, "end_pos": 3195, "annotation": "n_glycosylation_sequon" }, { "start_pos": 391, "end_pos": 393, "annotation": "n_glycosylation_sequon" }, { "start_pos": 445, "end_pos": 447, "annotation": "n_glycosylation_sequon" }, { "start_pos": 62, "end_pos": 64, "annotation": "n_glycosylation_sequon" }, { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" }, { "start_pos": 830, "end_pos": 832, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LF70", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF70" }, { "id": "PS50006", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50006" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FHA", "eco_id": "ECO_0000259", "start_pos": 27, "end_pos": 76, "start_aa": "Cys", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 339 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 104, "end_pos": 106 }, { "start_pos": 1237, "end_pos": 1239 }, { "start_pos": 167, "end_pos": 169 }, { "start_pos": 1948, "end_pos": 1950 }, { 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"length": 1302, "header": "tr|I3LF83-1|I3LF83_PIG Isoform 1 of Zinc finger protein 536 OS=Sus scrofa OX=9823 GN=ZNF536 PE=3 SV=2 CANONICAL=I3LF83-1" }, "locus": { "chromosome": "6", "start_pos": 40614747, "end_pos": 40505264, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026089.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026089.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022723.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022723.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFB8-1", "uniprot_ac": "I3LFB8", "uniprot_id": "I3LFB8_PIG", "mass": { "chemical_mass": 66666.0, "monoisotopic_mass": 66666.0 }, "refseq": { "ac": "XP_003131696", "name": "heat shock factor protein 5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131696" }, "gene_names": [ { "name": "HSF5", "type": "recommended", "evidence": [ { "id": "I3LFB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ] }, { "name": "HSF5", "type": "synonym", "evidence": [ { "id": "XP_003131696", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131696" } ] } ], "protein_names": [ { "name": "Heat shock factor protein 5", "type": "recommended", "evidence": [ { "id": "I3LFB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFB8/entry#names_and_taxonomy" } ] }, { "name": "Heat shock transcription factor 5", "type": "synonym", "evidence": [ { "id": "I3LFB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFB8/entry#names_and_taxonomy" } ] }, { "name": "heat shock factor protein 5", "type": "synonym", "evidence": [ { "id": "XP_003131696", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131696" } ] } ], "function": [ { "annotation": "DNA-binding transcription factor that is essential for male fertility, spermatogenesis and meiotic prophase progression in spermatocytes under non-stress conditions. Positvely and negatively regulates gene expression to ensure progression of meiotic prophase beyond pachytene stage in spermatocytes.", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8#function" }, { "database": "UniProtKB", "id": "ARBA00094520", "url": "https://www.uniprot.org/uniprotkb/ARBA00094520#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HSF5", "url": "https://www.uniprot.org/uniprotkb/I3LFB8", "locus": { "chromosome": "12", "start_pos": 34698497, "end_pos": 34744554, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017641", "url": "https://www.ensembl.org/id/ENSSSCG00000017641" } ] } } ], "crossref": [ { "id": "I3LFB8", "url": "https://alphafold.ebi.ac.uk/entry/I3LFB8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017641", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017641", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100515407", "url": "https://www.ncbi.nlm.nih.gov/gene/100515407", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100515407", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515407", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HRIWQNS", "url": "https://omabrowser.org/oma/group/HRIWQNS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LFB8", "url": "https://www.orthodb.org/?gene=I3LFB8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10015", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10015", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10015:SF278", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10015:SF278", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00447", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00447", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003131696", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131696", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFB8-1", "url": "https://www.uniprot.org/uniprotkb/I3LFB8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGAGAGGAGGGSGVGGSGAEPELFKTTNFTSFIRQLNLYGFRKVVLGGPGAAGPGPGPGGGGPAGDGPLHHFHSPHFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASASASASTSPLQHQEPPPPPAGPRPEAHGPVAVGQFHRSFRRDSLSPYSFVSTSSHNHSTFPLKGLDRTPIPPRTWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSATSVHVQQGPQTMVSSSQKYSNYTPTAQYSQAYYPTAVLQCCSPSTHMDALSSCVTPTASSYAHCNYFQNPPMQSSYPVEFLPSSWPCSATDESKKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCSTSQSNRGQHILANSSNSNPSSTSQASQLEPLTPVGSDITSFVVGTEQAITCSLPQSPEYIYTIHTAQPVENTTMQESAAIQQAHVKLKEQLSHNLSPSSVVFVQEGLPFSAHQVDASIKCQTNPPENILPSEQTGYLISEMGPANKSSKDTGLSTPARYRERRSNSQQGKSPDLHLLVDVACKQEHFPKEEELKE", "length": 617, "header": "tr|I3LFB8-1|I3LFB8_PIG Isoform 1 of Heat shock factor protein 5 OS=Sus scrofa OX=9823 GN=HSF5 PE=3 SV=2 CANONICAL=I3LFB8-1" }, "isoforms": [ { "isoform_ac": "I3LFB8-1", "url": "https://www.uniprot.org/uniprotkb/I3LFB8/entry#I3LFB8-1", "sequence": { "sequence": "MEEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGAGAGGAGGGSGVGGSGAEPELFKTTNFTSFIRQLNLYGFRKVVLGGPGAAGPGPGPGGGGPAGDGPLHHFHSPHFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASASASASTSPLQHQEPPPPPAGPRPEAHGPVAVGQFHRSFRRDSLSPYSFVSTSSHNHSTFPLKGLDRTPIPPRTWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSATSVHVQQGPQTMVSSSQKYSNYTPTAQYSQAYYPTAVLQCCSPSTHMDALSSCVTPTASSYAHCNYFQNPPMQSSYPVEFLPSSWPCSATDESKKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCSTSQSNRGQHILANSSNSNPSSTSQASQLEPLTPVGSDITSFVVGTEQAITCSLPQSPEYIYTIHTAQPVENTTMQESAAIQQAHVKLKEQLSHNLSPSSVVFVQEGLPFSAHQVDASIKCQTNPPENILPSEQTGYLISEMGPANKSSKDTGLSTPARYRERRSNSQQGKSPDLHLLVDVACKQEHFPKEEELKE", "length": 617, "header": "tr|I3LFB8-1|I3LFB8_PIG Isoform 1 of Heat shock factor protein 5 OS=Sus scrofa OX=9823 GN=HSF5 PE=3 SV=2 CANONICAL=I3LFB8-1" }, "locus": { "chromosome": "12", "start_pos": 34744358, "end_pos": 34699501, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030177.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030177.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022758.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022758.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 350, "start_aa": "Thr", "end_pos": 350, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr350", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515407", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515407", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6G7F5-1", "protein_name": "Heat shock factor protein 5", "gene_name": "Hsf5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGAGGAGGAGSSGGGGGSGVGAAGAEPELFKTTNFTSFIRQLNLYGFRKVVLGGPGAAGPGPGPGAGGPAGDGPLHHFHSPHFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASASASASTSPLQHQDPPPQPAGPRPEQHGPVAVGQFHRSFRRDNLSPYSYVSTSSHNHSTFPLKGLDRTPIPPRTWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSATSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPSTHMDALSSCVTPTASSYAHCNYFQNPPMQSSYPVEFLPSNWPCSATDDSKKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPSSQSNRGQHILPNSNSSNPSSTSQASQLEPLTPVGSDITSFVVGTEQAITCSLPQSPEYIYTIHTAQPLENSTMQESATMQQTHVKLKEQLSHNSPPSSVVLVQEGLPFSTPQVDSSIKCQTNPPESILPSEQMGFLISEMGPASKSSKDTGLSTPARYRERRSNSQGKSPDLHLLVDVACKQEHFPKEEELKE", "length": 624 }, "evidence": [ { "id": "I3LFB8", "url": "https://omabrowser.org/oma/group/I3LFB8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4G112-1", "protein_name": "Heat shock factor protein 5", "gene_name": "HSF5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHMDALSSCVTPTASSYAHCNYFQNPSMQSSYPVEFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNPCSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAAIQQAHVKLKEHLNHNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLISEMGPASKPSEDTGLATPARYREHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE", "length": 596 }, "evidence": [ { "id": "I3LFB8", "url": "https://omabrowser.org/oma/group/I3LFB8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5ND04-1", "protein_name": "Heat shock factor protein 5", "gene_name": "Hsf5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGAGGAGGAGSSGGGGGSGVGAAGAEPELFKTTNFTSFIRQLNLYGFRKVVLGGPGAAGPGPGPGAGGPAGDGPLHHFHSPHFRRDQPQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASASASASTSPLQHQDPPPQPAGPRPEQHGPVAVGQFHRSFRRDNLSPYSYVSTSSHNHSAFPLKGLDRTPIPPRTWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSATSVHVQQGPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPPTHMDALSSCVTPTASSYAHCNYFQNPPMQSSYPVEFLPSNWPCSATDENKKTEVNLEAVFQIVDELHSSPKLEMVKVEPVETQCPSSQANRGQHILPNANSSNPSSTSQASQLEPLTPVGSDITSFVVGTEQAITCSLPQSPEYIYTIHTAQPLENSTMQESATIQQTHVKLKEQLNHNPSPSSVVFVQEGLPFSTPQVDSSIKCQTNPSENILPSEQMGFLISEMGPANKSTKDTGLSTPARYRERRSNSQGKSPDLHLLVDVACKQEHFPKEEELKE", "length": 624 }, "evidence": [ { "id": "I3LFB8", "url": "https://omabrowser.org/oma/group/I3LFB8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity", "id": "GO:0001216", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001216", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity", "id": "GO:0001217", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001217", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" }, { "name": "XY body", "id": "GO:0001741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001741", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" }, { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" }, { "name": "male meiotic nuclear division", "id": "GO:0007140", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007140", "evidence": [ { "database": "UniProtKB", "id": "I3LFB8", "url": "https://www.uniprot.org/uniprotkb/I3LFB8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 232, "end_pos": 234, "annotation": "n_glycosylation_sequon" }, { "start_pos": 314, "end_pos": 316, "annotation": "n_glycosylation_sequon" }, { "start_pos": 435, 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
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Participates in the degradation of nuclear DNA during lens cell differentiation.", "evidence": [ { "database": "UniProtKB", "id": "I3LFM5", "url": "https://www.uniprot.org/uniprotkb/I3LFM5#function" }, { "database": "UniProtKB", "id": "RU369111", "url": "https://www.uniprot.org/uniprotkb/RU369111#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFM5", "url": "https://www.uniprot.org/uniprotkb/I3LFM5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DNASE2B", "url": "https://www.uniprot.org/uniprotkb/I3LFM5", "locus": { "chromosome": "6", "start_pos": 129329867, "end_pos": 129340980, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026532", "url": "https://www.ensembl.org/id/ENSSSCG00000026532" } ] } } ], "crossref": [ { "id": "I3LFM5", "url": "https://alphafold.ebi.ac.uk/entry/I3LFM5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026532", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026532", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR004947", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004947", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10858", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10858", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10858:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10858:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03265", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03265", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LFM5", "url": "https://www.uniprot.org/uniprotkb/I3LFM5", "database": "UniProtKB", 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sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFM5", "url": "https://www.uniprot.org/uniprotkb/I3LFM5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "lysosome", "id": "GO:0005764", "url": 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"start_pos": 335, "end_pos": 337, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LFM5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 340, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LFM5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LFM5" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 254, "end_pos": 256 }, { "start_pos": 302, "end_pos": 304 }, { "start_pos": 335, 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"authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFP5", "url": "https://www.uniprot.org/uniprotkb/I3LFP5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626400", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626400", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZY30-1", "protein_name": "PDZK1 interacting protein 1", "gene_name": "PDZK1IP1", 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFQ3-1", "uniprot_ac": "I3LFQ3", "uniprot_id": "I3LFQ3_PIG", "mass": { "chemical_mass": 89961.0, "monoisotopic_mass": 89961.0 }, "refseq": { "ac": "XP_020941626", "name": "protein ELFN1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941626" }, "gene_names": [ { "name": "ELFN1", "type": "recommended", "evidence": [ { "id": "I3LFQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ] }, { "name": "ELFN1", "type": "synonym", "evidence": [ { "id": "XP_020941626", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941626" } ] } ], "protein_names": [ { "name": "Extracellular leucine rich repeat and fibronectin type III domain containing 1", "type": "synonym", "evidence": [ { "id": "I3LFQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3/entry#names_and_taxonomy" } ] }, { "name": "protein ELFN1", "type": "synonym", "evidence": [ { "id": "XP_020941626", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941626" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ELFN1", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3", "locus": { "chromosome": "3", "start_pos": 1190641, "end_pos": 1188155, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030485", "url": "https://www.ensembl.org/id/ENSSSCG00000030485" } ] } } ], "crossref": [ { "id": "ENSSSCG00000030485", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030485", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100621128", "url": "https://www.ncbi.nlm.nih.gov/gene/100621128", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050541", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050541", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621128", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621128", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TCELYSN", "url": "https://omabrowser.org/oma/group/TCELYSN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369:SF204", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369:SF204", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22986", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22986", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020941626", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941626", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFQ3-1", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGRRWGALWVCVAAAALLHAGGLARGDCWLIEGDKGFVWLAICSQNQPPYEAIPQQINSTIVDLRLNENRIRSVQYAALSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGVLRGLSKLEYLYLQANLIEVVTPSAFWECPNIVNVDLSMNRIQRLHSATFAGLARLSVCELYSNPFYCSCELLGFLRWLAAFTNATHAYDRMQCESPPLYAGYFLLGQGRHGQRSILSKLQSVCTDGSYAAETRPAPPGRAPPPPPPPPPPSEPSEAPCADDECFSGDGTTPLVALPTLATQAEARPLIKVKQLTQDSATLTVQLPSPFNRMYTLEHFNNSKSSTVSRLTRAQEEIRLTNLYALTNYTYCVVSTSSGLHHNHTCLTICLPKPPSPPGPVPSPSTATHYIMTILGCLFGMVLVLGAVYYCLRRRRRQEEQHKKAAAAAAAGGLQKTLLELKYGPGVEAPGLAPLSQGPLLGPEAVTRVPYLPAAAGEVEQYTLVESGETPKAGKGHYMEVRTGEPAERRDCERGRPGPGSQSSVAEISTIAREVDKVNQIINSCIDALKSEATSFQGGKSGAVAAAEPPLVVLSEPLAGKHGFLSPVYKDSFGHGLQRHHSVEAAPGAPRASTSSSGSARSPRPYRAETAAAAAVHKAAAAEAKYIEKTSPATDAILTVTPAAAVLRAEAEKSRQYGEHRHSYPGSHPAEPPTSPARPPPEGLGGRKASILEPLTRPRPRDLAYSQLSPQYHNLSYSSSPEHPCRPSQSIWERLRLSRRRHRDDDGEFVAAGHALRKKVQFAKDEDLHDILDYWKGVSAQHKS", "length": 828, "header": "tr|I3LFQ3-1|I3LFQ3_PIG Isoform 1 of Extracellular leucine rich repeat and fibronectin type III domain containing 1 OS=Sus scrofa OX=9823 GN=ELFN1 PE=4 SV=2 CANONICAL=I3LFQ3-1" }, "isoforms": [ { "isoform_ac": "I3LFQ3-1", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3/entry#I3LFQ3-1", "sequence": { "sequence": "MAGRRWGALWVCVAAAALLHAGGLARGDCWLIEGDKGFVWLAICSQNQPPYEAIPQQINSTIVDLRLNENRIRSVQYAALSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGVLRGLSKLEYLYLQANLIEVVTPSAFWECPNIVNVDLSMNRIQRLHSATFAGLARLSVCELYSNPFYCSCELLGFLRWLAAFTNATHAYDRMQCESPPLYAGYFLLGQGRHGQRSILSKLQSVCTDGSYAAETRPAPPGRAPPPPPPPPPPSEPSEAPCADDECFSGDGTTPLVALPTLATQAEARPLIKVKQLTQDSATLTVQLPSPFNRMYTLEHFNNSKSSTVSRLTRAQEEIRLTNLYALTNYTYCVVSTSSGLHHNHTCLTICLPKPPSPPGPVPSPSTATHYIMTILGCLFGMVLVLGAVYYCLRRRRRQEEQHKKAAAAAAAGGLQKTLLELKYGPGVEAPGLAPLSQGPLLGPEAVTRVPYLPAAAGEVEQYTLVESGETPKAGKGHYMEVRTGEPAERRDCERGRPGPGSQSSVAEISTIAREVDKVNQIINSCIDALKSEATSFQGGKSGAVAAAEPPLVVLSEPLAGKHGFLSPVYKDSFGHGLQRHHSVEAAPGAPRASTSSSGSARSPRPYRAETAAAAAVHKAAAAEAKYIEKTSPATDAILTVTPAAAVLRAEAEKSRQYGEHRHSYPGSHPAEPPTSPARPPPEGLGGRKASILEPLTRPRPRDLAYSQLSPQYHNLSYSSSPEHPCRPSQSIWERLRLSRRRHRDDDGEFVAAGHALRKKVQFAKDEDLHDILDYWKGVSAQHKS", "length": 828, "header": "tr|I3LFQ3-1|I3LFQ3_PIG Isoform 1 of Extracellular leucine rich repeat and fibronectin type III domain containing 1 OS=Sus scrofa OX=9823 GN=ELFN1 PE=4 SV=2 CANONICAL=I3LFQ3-1" }, "locus": { "chromosome": "3", "start_pos": 1190638, "end_pos": 1188155, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024339.2", "url": "https://www.ensembl.org/id/ENSSSCT00000024339.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022895.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022895.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 718, "start_aa": "Thr", "end_pos": 718, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr718", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621128", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621128", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZZ44-1", "protein_name": "Extracellular leucine-rich repeat and fibronectin type III domain containing 1", "gene_name": "Elfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGHGWGAPWVLVAAATLLHACGLAQGDCWLIEGDKGFVWLAICSQNQPPYEAIPQQINNTIVDLRLNENRIRSVQYASLSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGMLRGLSKLEYLYLQANLIEVVMASAFWECPNIVNIDLSMNRIQQLGSGTFAGLTKLSVCEIYSNPFYCSCELLGFLRWLAAFTNATQTHDRVQCESPPVYAGYFLLGQGRHGHQRSILSKLQSVCTEGSYTAEVLGPPRPVPGRSQPGHSPPPPPPEPSDMPCADDECFSGDGTTPLVVLTTLVPQTEARPSMKVKQLTQNSATIMVQLPSPFNRMYTLEQYNNSKSFTVSKLTQPQEEIRLTNLYTLTNYTYCVVSTSSGTHHNHTCLTICLPKPPSPPGPVPSPSTATHYIMTILGCLFGMVLVLGAVYYCLRKRRRQEEKHKKAVAAAAGSLKKTIIELKYGPEIEAPGLAPLTQGPLLGPEAVTRIPYLPAATSDVEQYKLVESGETPKATKGNYIEVRTGEPPERRGCELSRPAPETQSSVAEISTIAKEVDRVNQIINNCIDALKSESTSFQGAKSGAVSAAEPQLVLLSEPLASKHSFLSPVYKDAFGHGGLQRHHSVEAATGPPRASTSSSGSARSPRTFRAETAGAHKAPATETKYIEKSSPVPETILTVTPAATVLRAEADKSRQYGEHRHSYPGSHPAEPPAPPPPPPTHEGLGGRKASILEPLTRPRPRDLVYSQLSPQYHNLSYSSSPEYTCRASPSIWERLRLSRRRHKDDAEFMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQHKS", "length": 829 }, "evidence": [ { "id": "I3LFQ3", "url": "https://omabrowser.org/oma/group/I3LFQ3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G5E6T3-1", "protein_name": "Extracellular leucine rich repeat and fibronectin type III domain containing 1", "gene_name": "ELFN1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGCGWEAPWVWVCVAAALLHAGGLVRGDCWLIEGDKGFVWLAICSQNQPPYEAIPQQINSTIVDLRLNENRIRSVQYAALSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGVLRGLGKLEYLYLQANLIEAVAPGAFWECPNIVNVDLSMNRIQRLHSATFAGLARLSVCELYSNPFYCSCELLGFLRWLAAFANATQAHDRVQCESPPLYSGYFLLGQGRHGQRSILGKLQSVCTDGPYAAETRPAPGRPPPGRSPPPPPVPPAEPSEAPCAEDECFSGDGTTPLVALPTLAPQAEARPLIKVKQLTQNSATITVQLPSPFTRMYTLEHFNNSKSSTVSRLTRAQEEIRLTNLYALTNYTYCVVSSSSGLHHNHTCLTICLPQPPSPPGPVPSPSTATHYIMTVLGCLFGMVVVLGAVYYCLRRRRRREGKQKQAAAAAGSLKKTIIELKYGPELEAPGLAPLSQGPLLGPEAVTRIPYLPAAPGEVEQYQLAEGSGTPKGSKGGYMEVRAAEQAERREGEQGRPGPDSQSSVAEISTIAKEVDKVNQIINNCIDALKAEATSFQGGKPGAVSTAEPLAGKRGFLAPAYQDACGLQRHHSLEAAPGAPRASSSSSGSARSPRPYRAEPPALHEAKYIEKGSPAAEAILTVTPAAAVLRPEPEKGRQYGEHRHSYPGPHPVEPPAPPAPPESLGGRKASILEPLTRPRPRDLAYAPLSPQYRHLSYASSPEYACRASRSLWARFRLSRPRHRDAGECVAAGHALRRKVQFAKDEDLHDILDYWKGVSAQHKS", "length": 808 }, "evidence": [ { "id": "I3LFQ3", "url": "https://omabrowser.org/oma/group/I3LFQ3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C7U0-1", "protein_name": "Protein ELFN1", "gene_name": "ELFN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGRGWGALWVCVAAATLLHAGGLARADCWLIEGDKGFVWLAICSQNQPPYEAIPQQINSTIVDLRLNENRIRSVQYASLSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGMLRGLGKLEYLYLQANLIEVVMASSFWECPNIVNIDLSMNRIQQLNSGTFAGLAKLSVCELYSNPFYCSCELLGFLRWLAAFTNATQTYDRMQCESPPVYSGYYLLGQGRRGHRSILSKLQSVCTEDSYAAEVVGPPRPASGRSQPGRSPPPPPPPEPSDMPCADDECFSGDGTTPLVALPTLATQAEARPLIKVKQLTQNSATITVQLPSPFHRMYTLEHFNNSKASTVSRLTKAQEEIRLTNLFTLTNYTYCVVSTSAGLRHNHTCLTICLPRLPSPPGPVPSPSTATHYIMTILGCLFGMVLVLGAVYYCLRRRRRQEEKHKKAASAAAAGSLKKTIIELKYGPELEAPGLAPLSQGPLLGPEAVTRIPYLPAAGEVEQYKLVESADTPKASKGSYMEVRTGDPPERRDCELGRPGPDSQSSVAEISTIAKEVDKVNQIINNCIDALKSESTSFQGVKSGPVSVAEPPLVLLSEPLAAKHGFLAPGYKDAFGHSLQRHHSVEAAGPPRASTSSSGSVRSPRAFRAEAVGVHKAAAAEAKYIEKGSPAADAILTVTPAAAVLRAEAEKGRQYGEHRHSYPGSHPAEPPAPPGPPPPPPHEGLGRKASILEPLTRPRPRDLAYSQLSPQYHSLSYSSSPEYTCRASQSIWERFRLSRRRHKEEEEFMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQHKS", "length": 828 }, "evidence": [ { "id": "I3LFQ3", "url": "https://omabrowser.org/oma/group/I3LFQ3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8C8T7-1", "protein_name": "Protein ELFN1", "gene_name": "Elfn1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGHGWGTAWVLVAAATLLHAGGLAQGDCWLIEGDKGFVWLAICSQNQPPYEAIPQQINNTIVDLRLNENRIRSVQYASLSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGMLRGLSKLEYLYLQANLIEVVMASAFWECPNIVNIDLSMNRIQQLGSGTFAGLTKLSVCEIYSNPFYCSCELLGFLRWLAAFTNATQTHDRVQCESPPVYAGYFLLGQGRHGHQRSILSKLQSVCTEGSYTAEVLGPPRPVPGRSQPGHSPPPPPPEPSDMPCADDECFSGDGTTPLVILTTLVPQTEARPSMKVKQLTQNSATIMVQLPSPFNRMYTLEQYNNSKSFTVSKLTQPQEEIRLTNLYTLTNYTYCVVSTSSGTHHNHTCLTICLPKPPSPPGPVPSPSTATHYIMTILGCLFGMVLVLGAVYYCLRKRRRQEEKHKKAVAAAAGSLKKTIIELKYGPEIEAPGLAPLTQGPLLGPEAVTRIPYLPAATSDVEQYKLVESSETPKATKGNYIEVRTGEPQERRGCELSRPGEPQSSVAEISTIAKEVDRVNQIINNCIDALKSESTSFQGAKSGAVSAAEPQLVLLSEPLASKHSFLSPVYKDAFGHGGLQRHHSVEAAPGPPRASTSSSGSARSPRTFRAEATGTHKAPATETKYIEKSSPVPETILTVTPAATVLRAEADKSRQYGEHRHSYPGSHPAEPPAPPPPPPTHEGLGGRKASILEPLTRPRPRDLVYSQLSPQYHNLSYSSSPEYTCRASPSIWERLRLSRRRHKDDAEFMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQHKS", "length": 828 }, "evidence": [ { "id": "I3LFQ3", "url": "https://omabrowser.org/oma/group/I3LFQ3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "axon terminus", "id": "GO:0043679", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043679", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "excitatory synapse", "id": "GO:0060076", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060076", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "postsynaptic density membrane", "id": "GO:0098839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098839", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "chemical synaptic transmission", "id": "GO:0007268", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007268", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "establishment of protein localization", "id": "GO:0045184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045184", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "synaptic membrane adhesion", "id": "GO:0099560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099560", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein phosphatase inhibitor activity", "id": "GO:0004864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004864", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" }, { "name": "signaling receptor activity", "id": "GO:0038023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038023", "evidence": [ { "database": "UniProtKB", "id": "I3LFQ3", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 122, "end_pos": 124, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" }, { "start_pos": 345, "end_pos": 347, "annotation": "n_glycosylation_sequon" }, { "start_pos": 372, "end_pos": 374, "annotation": "n_glycosylation_sequon" }, { "start_pos": 387, "end_pos": 389, "annotation": "n_glycosylation_sequon" }, { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" }, { "start_pos": 758, "end_pos": 760, "annotation": "n_glycosylation_sequon" }, { "start_pos": 85, "end_pos": 87, "annotation": "n_glycosylation_sequon" }, { "start_pos": 90, "end_pos": 92, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LFQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFQ3" }, { "id": "SM00082", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00082" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LRRCT", "eco_id": "ECO_0000259", "start_pos": 190, "end_pos": 239, "start_aa": "Asn", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 718 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 122, "end_pos": 124 }, { "start_pos": 210, "end_pos": 212 }, { "start_pos": 345, "end_pos": 347 }, { "start_pos": 372, "end_pos": 374 }, { "start_pos": 387, "end_pos": 389 }, { "start_pos": 59, "end_pos": 61 }, { "start_pos": 758, "end_pos": 760 }, { "start_pos": 85, "end_pos": 87 }, { "start_pos": 90, "end_pos": 92 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFR6-1", "uniprot_ac": "I3LFR6", "uniprot_id": "I3LFR6_PIG", "mass": { "chemical_mass": 24747.0, "monoisotopic_mass": 24747.0 }, "refseq": { "ac": "XP_003481600", "name": "nucleolar protein 12", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481600" }, "gene_names": [ { "name": "NOL12", "type": "recommended", "evidence": [ { "id": "I3LFR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFR6" } ] }, { "name": "NOL12", "type": "synonym", "evidence": [ { "id": "XP_003481600", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481600" } ] } ], "protein_names": [ { "name": "Nucleolar protein 12", "type": "recommended", "evidence": [ { "id": "I3LFR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFR6/entry#names_and_taxonomy" } ] }, { "name": "nucleolar protein 12", "type": "synonym", "evidence": [ { "id": "XP_003481600", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481600" } ] } ], "function": [ { "annotation": "Multifunctional RNA binding protein that plays a role in RNA metabolism and DNA maintenance. Participates in the resolution of DNA stress and the maintenance of genome integrity by localizing to sites of DNA insults. Also plays a role in proper nucleolar organization by limiting nucleolar size and regulating nucleolar number. Mechanistically, regulates the nucleolar levels of fibrillarin and nucleolin, two key players in pre-rRNA processing and ribosome assembly.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZL3#function" }, { "database": "UniProtKB", "id": "ARBA00057078", "url": "https://www.uniprot.org/uniprotkb/ARBA00057078#function" }, { "database": "UniProtKB", "id": "I3LFR6", "url": "https://www.uniprot.org/uniprotkb/I3LFR6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFR6", "url": "https://www.uniprot.org/uniprotkb/I3LFR6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NOL12", "url": "https://www.uniprot.org/uniprotkb/I3LFR6", "locus": { "chromosome": "5", "start_pos": 10137362, "end_pos": 10144140, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021663", "url": "https://www.ensembl.org/id/ENSSSCG00000021663" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021663", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021663", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22249", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22249", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100737940", "url": "https://www.ncbi.nlm.nih.gov/gene/100737940", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019186", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019186", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737940", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737940", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LHMHSRK", "url": "https://omabrowser.org/oma/group/LHMHSRK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LFR6", "url": "https://www.orthodb.org/?gene=I3LFR6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14577", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14577", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14577:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14577:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09805", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09805", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003481600", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481600", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QZL3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZL3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFR6", "url": "https://www.uniprot.org/uniprotkb/I3LFR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFR6-1", "url": "https://www.uniprot.org/uniprotkb/I3LFR6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRNKKKKRDGDSRRPRLILSFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKEEQKKLREERHQEYLKMLAEREEALEEADELDRLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLTPPEQGAGHGPEEETSSVEKPSRALPRKSRDPLLSQRISSLTASLHAHSRKKVKRKHPRRAQESTKKPPSATRTSKTQRRRLTGKARHSGE", "length": 214, "header": "tr|I3LFR6-1|I3LFR6_PIG Isoform 1 of Nucleolar protein 12 OS=Sus scrofa OX=9823 GN=NOL12 PE=3 SV=2 CANONICAL=I3LFR6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QZL3-1", "url": "https://www.uniprot.org/uniprotkb/I3LFR6/entry#A0A5G2QZL3-1", "sequence": { "sequence": "MGRNKKKKRDGDSRRPRLILSFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKEEQKKLREERHQEYLKMLAEREEALEEADELDRLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLTPPEGGLLGGCVGVAQRWSTSQGFQSPGAQRSPLPLSGCELLPCPCPFTTKSGVPDIAAACGIAVSMKAGSPPDAPESGCLWSLLLHSTSLP", "length": 215, "header": "tr|A0A5G2QZL3-1|A0A5G2QZL3_PIG Computationally mapped isoform of Nucleolar protein 12 OS=Sus scrofa OX=9823 GN=NOL12 PE=3 SV=1 CANONICAL=I3LFR6-1" }, "locus": { "chromosome": "5", "start_pos": 10144086, "end_pos": 10140614, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075377.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075377.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070333.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070333.1" } ] } }, { "isoform_ac": "I3LFR6-1", "url": "https://www.uniprot.org/uniprotkb/I3LFR6/entry#I3LFR6-1", "sequence": { "sequence": "MGRNKKKKRDGDSRRPRLILSFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKEEQKKLREERHQEYLKMLAEREEALEEADELDRLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLTPPEQGAGHGPEEETSSVEKPSRALPRKSRDPLLSQRISSLTASLHAHSRKKVKRKHPRRAQESTKKPPSATRTSKTQRRRLTGKARHSGE", "length": 214, "header": "tr|I3LFR6-1|I3LFR6_PIG Isoform 1 of Nucleolar protein 12 OS=Sus scrofa OX=9823 GN=NOL12 PE=3 SV=2 CANONICAL=I3LFR6-1" }, "locus": { "chromosome": "5", "start_pos": 10144086, "end_pos": 10139158, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025870.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025870.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022908.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022908.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFR6", "url": "https://www.uniprot.org/uniprotkb/I3LFR6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100737940", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737940", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7JHB1-1", "protein_name": "Nucleolar protein 12", "gene_name": "Nol12", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSTQGTLPAPPLDVPDQAGWCRPLSTRRFRPAQSCALDHPNPARSMVPAHSQLLVVVDKREYLTGFHKRKVERKKAAIEEIKQRLKQEQKKLREERHQEYLKMLAEREEALEEADELERLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLPLPEQGDLDGSQEEVSCMEKPTKALPRKSKDPLLSQRISSLTATLHAHSRKKVKRKHPRRAQDSTKKPPSATRTSKTQRRRRMTGKARHSGE", "length": 247 }, "evidence": [ { "id": "I3LFR6", "url": "https://omabrowser.org/oma/group/I3LFR6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q2KIV0-1", "protein_name": "Nucleolar protein 12", "gene_name": "NOL12", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGRNKKKRDGDDRRQRLILSFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKEEQKKLREERHQEYLKMLAEREEALEEADELDRLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLPTPEQGAGSGPEEEVSSMEKPTRALPRKSRDPLLSQRISSLTASLHAHSRKKVKKKRLRRAQDTTKKPPSATRTSKTRRRRLTGKARHSGE", "length": 213 }, "evidence": [ { "id": "I3LFR6", "url": "https://omabrowser.org/oma/group/I3LFR6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5D1Z3-1", "protein_name": "Nucleolar protein 12", "gene_name": "Nol12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRNKKKKRDGDDRRPRLILNFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKQEQKKLREERHQEYLKMLAEREEALEEADELERLVTAKTESVQYDHPNHTVTVTTVSDLDLSGARLLGLPLPEQGDQDGSQEEEVSSMEKPTKALPKKSKDPLLSQRISSLTATLHAHSRKKVKRKHPRRAQDSTKKPPSATRTSKTQRRRRMTGKARHNGE", "length": 216 }, "evidence": [ { "id": "I3LFR6", "url": "https://omabrowser.org/oma/group/I3LFR6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7ZWE7-1", "protein_name": "Nucleolar protein 12", "gene_name": "nol12", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGKSDRLQQGSKGKGGGKRKHGKCVLMFDDKDRQDFLTGFHKRKLERRRAALEEMKSKLKEEQKRLREERHKEYLKMLQERRQALDEADELEEAITATTECVQYDHPNHTVTVTTISDLDLSADRLLEPAQRDGGDGEERERTEALPKQAGNPLLSKKIQSLTASLNSLVKQKKRRKQKRRQEAKQRSHQSDRKSSSSAFVHNNKQKQGKSTKRQRRRQTGRNERSQD", "length": 228 }, "evidence": [ { "id": "I3LFR6", "url": "https://omabrowser.org/oma/group/I3LFR6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8BG17-1", "protein_name": "Nucleolar protein 12", "gene_name": "Nol12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRNKKKKKRDGDDRRPRLVLNFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKQEQKKLREERHQEYLKMLAEREEALEEADELERLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLPLPEQGDQDGSQEEEMSSLEKPTKALPRKSKDPLLSQRISSLTATLHAHSRKKVKRKHPRRAQDSTKKPPSATRTSKTQRRRRMTGKARHNGE", "length": 217 }, "evidence": [ { "id": "I3LFR6", "url": "https://omabrowser.org/oma/group/I3LFR6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UGY1-1", "protein_name": "Nucleolar protein 12", "gene_name": "NOL12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGRNKKKKRDGDDRRPRLVLSFDEEKRREYLTGFHKRKVERKKAAIEEIKQRLKEEQRKLREERHQEYLKMLAEREEALEEADELDRLVTAKTESVQYDHPNHTVTVTTISDLDLSGARLLGLTPPEGGAGDRSEEEASSTEKPTKALPRKSRDPLLSQRISSLTASLHAHSRKKVKRKHPRRAQDSKKPPRAPRTSKAQRRRLTGKARHSGE", "length": 213 }, "evidence": [ { "id": "I3LFR6", "url": "https://omabrowser.org/oma/group/I3LFR6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LFR6", "url": "https://www.uniprot.org/uniprotkb/I3LFR6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "rRNA binding", "id": "GO:0019843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019843", "evidence": [ { "database": "UniProtKB", "id": "I3LFR6", "url": "https://www.uniprot.org/uniprotkb/I3LFR6" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "I3LFR6", "url": "https://www.uniprot.org/uniprotkb/I3LFR6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 102, "end_pos": 104, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFR7-1", "uniprot_ac": "I3LFR7", "uniprot_id": "I3LFR7_PIG", "mass": { "chemical_mass": 56633.0, "monoisotopic_mass": 56633.0 }, "refseq": {}, "gene_names": [ { "name": "DPEP2", "type": "recommended", "evidence": [ { "id": "I3LFR7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ] } ], "protein_names": [ { "name": "Dipeptidase", "type": "recommended", "evidence": [ { "id": "I3LFR7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFR7/entry#names_and_taxonomy" } ] }, { "name": "3.4.13.19", "type": "synonym", "evidence": [ { "id": "I3LFR7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFR7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Independently of its dipeptidase activity, acts as an adhesion receptor for neutrophil recruitment from bloodstream into inflamed lungs and liver.", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7#function" }, { "database": "UniProtKB", "id": "ARBA00029402", "url": "https://www.uniprot.org/uniprotkb/ARBA00029402#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DPEP2", "url": "https://www.uniprot.org/uniprotkb/I3LFR7", "locus": { "chromosome": "6", "start_pos": 28593546, "end_pos": 28599051, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021105", "url": "https://www.ensembl.org/id/ENSSSCG00000021105" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021105", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021105", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01301", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01301", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621778", "url": "https://www.ncbi.nlm.nih.gov/gene/100621778", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000180", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000180", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008257", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008257", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032466", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032466", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621778", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621778", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WSGNVLR", "url": "https://omabrowser.org/oma/group/WSGNVLR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LFR7", "url": "https://www.orthodb.org/?gene=I3LFR7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10443", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10443", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10443:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10443:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01244", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01244", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2142691", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2142691", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5423646", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5423646", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "20401", "url": "https://www.rhea-db.org/rhea/20401", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "48616", "url": "https://www.rhea-db.org/rhea/48616", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "48940", "url": "https://www.rhea-db.org/rhea/48940", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "60520", "url": "https://www.rhea-db.org/rhea/60520", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "62704", "url": "https://www.rhea-db.org/rhea/62704", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFR7-1", "url": "https://www.uniprot.org/uniprotkb/I3LFR7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGTRCALGRPGAEGHSLREAPQTLSLGEQGSGDPPLPACPAPRSMRPRGLQGPRELRQRPLLHLLLLLWLLLRPVTRAQTAPGAPSAPTAPGTPRAPSLPERARALMRDFPLVDGHNDMPLVVRQFYHNRLQDVNLRNFSHGHTNLDRLRDGLVGAQFWSAYVPCQTQERDAVRLTLEQIDLIRRMCASYSELELVTSVKALNSTQKLACLIGVEGGHSLDSSLSVLRTFYVLGVRYLTLTHTCNTPWAESSAKGIHLFHSNVSGLTSFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCENARNVPDDILQLLKKNGGIVMVSLSVGVVQCNLLANVSTVADHFDHIRAVIGSKFIGIGGDYDGAGRFPQGLEDVSTYPVLIEELLSRGWSEEELWGVLRGNLLRVFQQVEQVQEESKGQSPLEDEFPDEQLGSSCRSILPRLHQRQNLAPDQKLTKTPMSRKSILPPKWPFSKSSPHMAPGFTVITAFPIIILWLW", "length": 514, "header": "tr|I3LFR7-1|I3LFR7_PIG Isoform 1 of Dipeptidase OS=Sus scrofa OX=9823 GN=DPEP2 PE=3 SV=2 CANONICAL=I3LFR7-1" }, "isoforms": [ { "isoform_ac": "I3LFR7-1", "url": "https://www.uniprot.org/uniprotkb/I3LFR7/entry#I3LFR7-1", "sequence": { "sequence": "MGTRCALGRPGAEGHSLREAPQTLSLGEQGSGDPPLPACPAPRSMRPRGLQGPRELRQRPLLHLLLLLWLLLRPVTRAQTAPGAPSAPTAPGTPRAPSLPERARALMRDFPLVDGHNDMPLVVRQFYHNRLQDVNLRNFSHGHTNLDRLRDGLVGAQFWSAYVPCQTQERDAVRLTLEQIDLIRRMCASYSELELVTSVKALNSTQKLACLIGVEGGHSLDSSLSVLRTFYVLGVRYLTLTHTCNTPWAESSAKGIHLFHSNVSGLTSFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCENARNVPDDILQLLKKNGGIVMVSLSVGVVQCNLLANVSTVADHFDHIRAVIGSKFIGIGGDYDGAGRFPQGLEDVSTYPVLIEELLSRGWSEEELWGVLRGNLLRVFQQVEQVQEESKGQSPLEDEFPDEQLGSSCRSILPRLHQRQNLAPDQKLTKTPMSRKSILPPKWPFSKSSPHMAPGFTVITAFPIIILWLW", "length": 514, "header": "tr|I3LFR7-1|I3LFR7_PIG Isoform 1 of Dipeptidase OS=Sus scrofa OX=9823 GN=DPEP2 PE=3 SV=2 CANONICAL=I3LFR7-1" }, "locus": { "chromosome": "6", "start_pos": 28599001, "end_pos": 28593651, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027498.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027498.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022909.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022909.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621778", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621778", "resource": "KEGG Pathway" }, { "id": "R-SSC-2142691", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2142691", "resource": "Reactome", "description": "Synthesis of Leukotrienes (LT) and Eoxins (EX)" }, { "id": "R-SSC-5423646", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5423646", "resource": "Reactome", "description": "Aflatoxin activation and detoxification" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BIR2-1", "protein_name": "Dipeptidase", "gene_name": "DPEP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPSGGLEHPHMLTQRPLLLLLWLLLRLVTRAQTAPAAPIALTSLDTSSTLSLGERARALMRDFPLVDGHNDMPLVLRQFNRKGLQDVNLRNFSHGQTSLDRLKDGLVGAQFWSAYVPCQTQERDAVRLTLEQIDLIHRMCASYSELELVTSVKALNGTRKLACLIGVEGGHSLDSSLSVLRTFYVLGVRYLTLTHTCNTPWAESSAKGIHPFYSDVSGLTSFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARAVCESTRNVPDDILQLLKNNGGIVMVSLSVGVLQCNPLANVSTVADHFDHIRAVIGSKFIGIGGDYDGAGRFPQGLEDVSTYPVLIEELLRRGWSEEELWGVLRGNLLRVFSRVEQVREENKGQSPLEDEFPDEQLGSSCRSVLSHLQQRENLAQDQKLTRTPRHGSPILPTMRSFSKSSPNTAPGIIVIAAFLVLILWLW", "length": 467 }, "evidence": [ { "id": "I3LFR7", "url": "https://omabrowser.org/oma/group/I3LFR7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5M872-1", "protein_name": "Dipeptidase 2", "gene_name": "Dpep2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLKGLEGHWVLSQVFLLVVVLLLLGPSEPLIRAQTKPGIADASTAPSPLRTLTKPAIFSIPTTPGNPNFPDLRDRTRALMQDFPLIDGHNDLPLVLRQFYQNGLQDTNLRNFTHGQTSLNRLKDGFVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSVQALNSTQKLACLIGVEGGHSLDNSLAVLRSFYLLGVRYLTLTHTCNTPWAESSSKDVHSFYSSVKGLTSFGEKVVAEMNRLGMMIDLSHVSDATARQALEVSQAPVIFSHSAARAVCPNARNLPDDILQLLKKNGGIVMVTFAVGVLPCNPLANVSTVADHFDHIRTVIGSEFIGVGGDYDGTKQFPQGLEDVSTYPVLIEELLRRGWGEQELQGVLRGNLLRVFRQVEQVREKNKWQSPLEDMIPEEQLDSACHSVLPHRRQYPEKDPPETPDSHTHKLSPKMPYSKSSPLRASSLTIMATFLGLLI", "length": 481 }, "evidence": [ { "id": "I3LFR7", "url": "https://omabrowser.org/oma/group/I3LFR7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8C255-1", "protein_name": "Dipeptidase 2", "gene_name": "Dpep2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSLTGLKGHWVLGHGLSVFLLVLLLLGPSQPLIWTQTKPGFSGASTTSSIPRALTKPDISSIPTTPGNPNFPDLRDRARALMQEFPLIDGHNDMPLVLRQFYQNGLQDANLRNFTHGQTSLDRLKDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRICASYSELELVTSVKALNSTQKLACLIGVEGGHSLDNSLAVLRSFYLLGVRYLTLTHTCNTPWAETSSKGVHAFYSSVTGLTSFGEKVVAEMNRLGMMVDLSHVSDAAARRALEVSQAPVIFSHSAARAVCPNARNLPDDLLQLLKKNGGIVMVTFSVGVLPCNPLANVSTVADHFDHIRSVIGSEFIGIGGDYDGTKQFPQGLEDVSTYPVLIEELLRRGWNEQELQGILRGNLLRVFRQVEQVRDKSKWQSPLEDMIPEEQLDSACHSALRPQKQHPEKNQPETPEYHILKFSHSKSSPHIVPSLAIVATLLGLIV", "length": 478 }, "evidence": [ { "id": "I3LFR7", "url": "https://omabrowser.org/oma/group/I3LFR7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H4A9-1", "protein_name": "Dipeptidase 2", "gene_name": "DPEP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQPSGLEGPGTFGRWPLLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNFSYGQTSLDRLRDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSAKALNDTQKLACLIGVEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSFYNNISGLTDFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSARNVPDDILQLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLEDKFPDEQLSSSCHSDLSRLRQRQSLTSGQELTEIPIHWTAKLPAKWSVSESSPHMAPVLAVVATFPVLILWL", "length": 486 }, "evidence": [ { "id": "I3LFR7", "url": "https://omabrowser.org/oma/group/I3LFR7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" }, { "name": "leukotriene D4 catabolic process", "id": "GO:1901749", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901749", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" }, { "name": "metallodipeptidase activity", "id": "GO:0070573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070573", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" }, { "name": "dipeptidase activity", "id": "GO:0016805", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016805", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" }, { "name": "beta-lactamase activity", "id": "GO:0008800", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008800", "evidence": [ { "database": "UniProtKB", "id": "I3LFR7", "url": "https://www.uniprot.org/uniprotkb/I3LFR7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 203, "end_pos": 205, "annotation": "n_glycosylation_sequon" }, { "start_pos": 262, "end_pos": 264, "annotation": "n_glycosylation_sequon" }, { "start_pos": 353, "end_pos": 355, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "20401", "name": "", "equation": "a beta-lactam + H2O = a substituted beta-amino acid", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "20401", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/20401" } ] }, { "id": "48616", "name": "", "equation": "leukotriene D4 + H2O = leukotriene E4 + glycine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48616", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48616" } ] }, { "id": "48940", "name": "", "equation": "an L-aminoacyl-L-amino acid + H2O = 2 an L-alpha-amino acid", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48940", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48940" } ] }, { "id": "60520", "name": "", "equation": "L-cystine-bis-glycine + 2 H2O = L-cystine + 2 glycine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "60520", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/60520" } ] }, { "id": "62704", "name": "", "equation": "glycyldehydrophenylalanine + H2O = 2,3-didehydrophenylalanine + glycine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "62704", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/62704" } ] }, { "id": "R-SSC-266012", "name": "LTD4 is converted to LTE4 by DPEP1/2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [ "R-ALL-266074" ], "output_participant_list": [ "R-ALL-266033" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-266012", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-266012" } ] }, { "id": "R-SSC-5433067", "name": "DPEPs hydrolyse glycine from AFXBO-CG, AFNBO-CG", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5433067", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5433067" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-266033", "participant_name": "LTE4 [extracellular region]", "crossref": [ { "id": "C05952", "database": "COMPOUND", "url": "" }, { "id": "57462", "database": "ChEBI", "url": "" }, { "id": "ZINC000004629873", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-266074", "participant_name": "LTD4 [extracellular region]", "crossref": [ { "id": "63166", "database": "ChEBI", "url": "" }, { "id": "52940265", "database": "PubChem Compound", "url": "" }, { "id": "CPD66-21", "database": "AraCyc", "url": "" }, { "id": "ZINC000004632133", "database": "ZINC", "url": "" }, { "id": "C05951", "database": "COMPOUND", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 138, "end_pos": 140 }, { "start_pos": 203, "end_pos": 205 }, { "start_pos": 262, "end_pos": 264 }, { "start_pos": 353, "end_pos": 355 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LFS2-1", "uniprot_ac": "I3LFS2", "uniprot_id": "I3LFS2_PIG", "mass": { "chemical_mass": 19330.0, "monoisotopic_mass": 19330.0 }, "refseq": { "ac": "XP_003358809", "name": "centrosomal protein of 19 kDa isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358809" }, "gene_names": [ { "name": "CEP19", "type": "recommended", "evidence": [ { "id": "I3LFS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFS2" } ] }, { "name": "CEP19", "type": "synonym", "evidence": [ { "id": "XP_003358809", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358809" } ] } ], "protein_names": [ { "name": "Centrosomal protein of 19 kDa", "type": "recommended", "evidence": [ { "id": "I3LFS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFS2/entry#names_and_taxonomy" } ] }, { "name": "centrosomal protein of 19 kDa isoform X3", "type": "synonym", "evidence": [ { "id": "XP_003358809", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358809" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFS2", "url": "https://www.uniprot.org/uniprotkb/I3LFS2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CEP19", "url": "https://www.uniprot.org/uniprotkb/I3LFS2", "locus": { "chromosome": "13", "start_pos": 133428390, "end_pos": 133420032, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000057729", "url": "https://www.ensembl.org/id/ENSSSCG00000057729" } ] } } ], "crossref": [ { "id": "100620380", "url": "https://www.ncbi.nlm.nih.gov/gene/100620380", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620380", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620380", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AKKCGIQ", "url": "https://omabrowser.org/oma/group/AKKCGIQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LFS2", "url": "https://www.orthodb.org/?gene=I3LFS2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31539", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31539", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31539:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31539:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14933", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14933", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003358809", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358809", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LFS2", "url": "https://www.uniprot.org/uniprotkb/I3LFS2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFS2-1", "url": "https://www.uniprot.org/uniprotkb/I3LFS2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMCTAKKCGIRFQPPAIILIYENEMKGKSRQRIMPVRNFSKFSDCSRAAEQLKNNPRHKDYLEQVSMRQLEKLFSFLRGYLWGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFPQDEQLQSCGWDTESADEF", "length": 163, "header": "tr|I3LFS2-1|I3LFS2_PIG Isoform 1 of Centrosomal protein of 19 kDa OS=Sus scrofa OX=9823 GN=CEP19 PE=3 SV=1 CANONICAL=I3LFS2-1" }, "isoforms": [ { "isoform_ac": "I3LFS2-1", "url": "https://www.uniprot.org/uniprotkb/I3LFS2/entry#I3LFS2-1", "sequence": { "sequence": "MMCTAKKCGIRFQPPAIILIYENEMKGKSRQRIMPVRNFSKFSDCSRAAEQLKNNPRHKDYLEQVSMRQLEKLFSFLRGYLWGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFPQDEQLQSCGWDTESADEF", "length": 163, "header": "tr|I3LFS2-1|I3LFS2_PIG Isoform 1 of Centrosomal protein of 19 kDa OS=Sus scrofa OX=9823 GN=CEP19 PE=3 SV=1 CANONICAL=I3LFS2-1" }, "locus": { "chromosome": "13", "start_pos": 133425536, "end_pos": 133424236, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101393.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101393.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078215.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078215.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFS2", "url": "https://www.uniprot.org/uniprotkb/I3LFS2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620380", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620380", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZZU5-1", "protein_name": "Centrosomal protein of 19 kDa", "gene_name": "CEP19", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSCIAKKCGIRFQPPSVILIYKEKDKTRRRIMPVRNFSQFSDCGIAAEQLKNNPRHKAYLEGVSLRQLKKLHSLLRGHLRGESLAESLKKTQQEETIDPEEDMNKLDDKELAKRKSIMDELFEKNRKKKDDPDFIYDIEVEFPQDEQLESCGWDVESSEEV", "length": 161 }, "evidence": [ { "id": "I3LFS2", "url": "https://omabrowser.org/oma/group/I3LFS2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6H7C9-1", "protein_name": "Centrosomal protein of 19 kDa", "gene_name": "CEP19", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MMCTAKKCGIRFQPPAIILIYENEIKGKSRQRIMPVRNFSKYSDCSRAAEQLKNNPRHKGYLEQVSLKQLEKLFSFLRGNLWGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPNFVYDIEVEFPQDEQLQSCGWDTESAEEF", "length": 163 }, "evidence": [ { "id": "I3LFS2", "url": "https://omabrowser.org/oma/group/I3LFS2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3GSK7-1", "protein_name": "Centrosomal protein of 19 kDa", "gene_name": "Cep19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKYIAKKCGVRFQPPAIILIYDNETEGKSRQRIMPVRNFSKFSDCTRAAEQLKNNPRHKNYLELVSLKQLEKLFVFLRGYLQGQSLAETKEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKRKDDPSFVYDVEVEFPQDEQLLSCSWDTESADEF", "length": 163 }, "evidence": [ { "id": "I3LFS2", "url": "https://omabrowser.org/oma/group/I3LFS2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": 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"database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CQA8-1", "protein_name": "Centrosomal protein of 19 kDa", "gene_name": "Cep19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYIAKKCGVRFQPPAVILIYENETEGKSRQRIMPVRNFSKFSDCTRAAEQLKNNPRHKSYLEQVPLKQLEKLFVFLRGSLQGQSLAETMEQIRRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKRKDDPTFVYDVEVEFPQDEQLLSCSWDTASVDDF", "length": 163 }, "evidence": [ { "id": "I3LFS2", "url": "https://omabrowser.org/oma/group/I3LFS2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QZX9-1", "protein_name": "Centrosomal protein of 19 kDa", "gene_name": "Cep19", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKYIAKKCGVRFQPPAMILIYENEAEGKSRQRIMPVRNFSKFSDCTRAAEQLKNNPRHKSYLEQVSLKQLEKLFVFLRGSLQGQSLAETMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKRKDDPSFVYDVEVEFPQDEQLQSCSWDTASVDEF", "length": 163 }, "evidence": [ { "id": "I3LFS2", "url": 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"LOC100624333", "type": "synonym", "evidence": [ { "id": "XP_020941918", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941918" } ] } ], "protein_names": [ { "name": "Acyltransferase", "type": "recommended", "evidence": [ { "id": "I3LFT9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFT9/entry#names_and_taxonomy" } ] }, { "name": "2-acylglycerol O-acyltransferase 2-A", "type": "synonym", "evidence": [ { "id": "XP_020941918", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941918" } ] }, { "name": "2.3.1.-", "type": "synonym", "evidence": [ { "id": "I3LFT9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFT9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFT9", "url": "https://www.uniprot.org/uniprotkb/I3LFT9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100624333", "url": "https://www.uniprot.org/uniprotkb/I3LFT9", "locus": {} } ], "crossref": [ { "id": "I3LFT9", "url": "https://alphafold.ebi.ac.uk/entry/I3LFT9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030709", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030709", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07987", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07987", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624333", "url": "https://www.ncbi.nlm.nih.gov/gene/100624333", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624333", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624333", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RSQWMRR", "url": "https://omabrowser.org/oma/group/RSQWMRR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LFT9", "url": "https://www.orthodb.org/?gene=I3LFT9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12317", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12317", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12317:SF78", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12317:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03982", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03982", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020941918", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941918", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LFT9", "url": "https://www.uniprot.org/uniprotkb/I3LFT9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LFT9-1", "url": "https://www.uniprot.org/uniprotkb/I3LFT9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCRAAERGGNQRPGVRASGLGHCRAMVARETALYRMPASSSCLRQSLQVFAVLQWVFSFLGLAQVCLAALILVLLGRAWILAVLYLVWLYRDRNTPWEGGRRSAWVRNWAIWSHFRDYFPISLVKTAELDPSRNYVFGIHPHGVMVIGAFSNFCTDATGFSHLFPGLRPHLLMLPCWFNLPIFRDYIMCAGLVSSDKASASYLLSRPQGGQVAVLSVGGPLEALEAKPGALTLRIRNQKGFVKLALEHGASLVPVFSFGENELFQQFPNPPGSWVRRAQEGLQPLLRVALPLFRGPWGLPLPFRSPIHTVVGAPIPVQRIQRPSREQVDALHAIYVERLTQLFEEHKARYGVPADRHLLLI", "length": 361, "header": "tr|I3LFT9-1|I3LFT9_PIG Isoform 1 of Acyltransferase OS=Sus scrofa OX=9823 GN=LOC100624333 PE=3 SV=2 CANONICAL=I3LFT9-1" }, "isoforms": [ { "isoform_ac": "I3LFT9-1", "url": "https://www.uniprot.org/uniprotkb/I3LFT9/entry#I3LFT9-1", "sequence": { "sequence": 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reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFT9", "url": "https://www.uniprot.org/uniprotkb/I3LFT9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624333", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624333", "resource": "KEGG Pathway" } ], "orthologs": 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"MSGTFNDIRRRKKEEGSPTAGITERHENKSLSSIDKREQTLKPQLESCCPLATPFERRLQTLAVAWHTSSFVLFSIFTLFAISTPALWVLAIPYMIYFFFDRSPATGEVVNRYSLRFRSLPIWKWYCDYFPISLIKTVNLKPTFTLSKNKRVNEKNYKIRLWPTKYSINLKSNSTIDYRNQECTGPTYLFGYHPHGIGALGAFGAFATEGCNYSKIFPGIPISLMTLVTQFHIPLYRDYLLALGISSVSRKNALRTLSKNQSICIVVGGARESLLSSTNGTQLILNKRKGFIKLAIQTGNINLVPVFAFGEVDCYNVLSTKKDSVLGKMQLWFKENFGFTIPIFYARGLFNYDFGLLPFRAPINVVVGRPIYVEKKITNPPDDVVNHFHDLYIAELKRLYYENREKYGVPDAELKIVG", "length": 418 }, "evidence": [ { "id": "I3LFT9", "url": "https://omabrowser.org/oma/group/I3LFT9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LFT9", "url": "https://www.uniprot.org/uniprotkb/I3LFT9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, 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Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LFV4", "url": "https://www.uniprot.org/uniprotkb/I3LFV4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 9, "go_terms": [ { "name": "protein localization to cytoplasmic stress granule", "id": "GO:1903608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903608", "evidence": [ { "database": "UniProtKB", "id": "I3LFV4", "url": "https://www.uniprot.org/uniprotkb/I3LFV4" } ], "pmid": "" }, { "name": "CRD-mediated mRNA stabilization", "id": "GO:0070934", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070934", "evidence": [ { "database": "UniProtKB", "id": "I3LFV4", "url": "https://www.uniprot.org/uniprotkb/I3LFV4" 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LG14", "url": "https://www.uniprot.org/uniprotkb/I3LG14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG14-1", "url": "https://www.uniprot.org/uniprotkb/I3LG14-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVAGNHSTASSFVLEGLTQLPELQLPFFLLFLGIYVVTVVGNLGLILLIAVSPLLHTPMYHFLGNLSFIDLCYSSVITPKMLVNFLGKKNIILYSECMAQLFFFVVFVVAEGYLLTAMAYDRYVAICSPLLYNVIMHFWVCSLLVLVAFILGFLSALAHTTAMMKLSFCKSHIIRHYFCDVLPLLNLSCSSTHLSELLLFVIAGFNTLVPTLAVFISYAFIFYSILHIRSLEGRSKAFGTCSSHLMAVGIFFGSITFMYFKPPSSNSLEQEKVSSVFYTTVIPMLNPLIYSLRNKDVKKALRKVWVRK", "length": 308, "header": "tr|I3LG14-1|I3LG14_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=OR8D1 PE=3 SV=2 CANONICAL=I3LG14-1" }, "isoforms": [ { "isoform_ac": "I3LG14-1", "url": "https://www.uniprot.org/uniprotkb/I3LG14/entry#I3LG14-1", "sequence": { "sequence": "MVAGNHSTASSFVLEGLTQLPELQLPFFLLFLGIYVVTVVGNLGLILLIAVSPLLHTPMYHFLGNLSFIDLCYSSVITPKMLVNFLGKKNIILYSECMAQLFFFVVFVVAEGYLLTAMAYDRYVAICSPLLYNVIMHFWVCSLLVLVAFILGFLSALAHTTAMMKLSFCKSHIIRHYFCDVLPLLNLSCSSTHLSELLLFVIAGFNTLVPTLAVFISYAFIFYSILHIRSLEGRSKAFGTCSSHLMAVGIFFGSITFMYFKPPSSNSLEQEKVSSVFYTTVIPMLNPLIYSLRNKDVKKALRKVWVRK", "length": 308, "header": "tr|I3LG14-1|I3LG14_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN=OR8D1 PE=3 SV=2 CANONICAL=I3LG14-1" }, "locus": { "chromosome": "9", "start_pos": 51283880, "end_pos": 51282957, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024582.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024582.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023007.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023007.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics 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Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-156711", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-156711", "resource": "Reactome", "description": "Polo-like kinase mediated events" }, { "id": "R-SSC-69273", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-69273", "resource": "Reactome", "description": "Cyclin A/B1/B2 associated events during G2/M transition" }, { "id": "R-SSC-69478", 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[ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "negative regulation of G2/M transition of mitotic cell cycle", "id": "GO:0010972", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010972", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "pmid": "" }, { "name": "meiotic cell cycle", "id": "GO:0051321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051321", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "pmid": "" }, { "name": "negative regulation of G2/MI transition of meiotic cell cycle", "id": "GO:0110031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0110031", "evidence": [ { "database": "UniProtKB", "id": "I3LG41", "url": "https://www.uniprot.org/uniprotkb/I3LG41" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-74386" ], "output_participant_list": [ "R-SSC-162650" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-162657", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162657" } ] }, { "id": "R-SSC-170055", "name": "Myt-1 mediated phosphorylation of Cyclin B:Cdc2 complexes", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-170055", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-170055" } ] }, { "id": "R-SSC-170116", "name": "PKMYT1 phosphorylates CCNA:CDK1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"R-SSC-2682334", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2682334", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3928663", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928663", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3928665", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928665", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020957042", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020957042", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "10596", "url": "https://www.rhea-db.org/rhea/10596", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AZC1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZC1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZC1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVP4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVP4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVP4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVP4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG48-1", "url": "https://www.uniprot.org/uniprotkb/I3LG48-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRGSGPRGAGRRRPPGGGGGGGDPPNTPASLAGCYSAPRRAPLWTCLLLCAALRTLVASPSNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDGENGRNIKENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDEPPKMHCSAEGEWLVPIGKCMCKAGYEEKNGTCQVCRPGFFKASPHSQSCSKCPPHSYTHEEASTSCVCEKDYFRRESDPPTMACTRPPSAPRNAISNVNETSVFLEWIPPADTGGRKDVSYYIACKKCSSHAGVCDECGGHVRYLPQQIGLKNTSVMMVDLLAHTNYTFEIEAVNGVSDLSPGARQYVSVNVTTNQAAPSPVTNVKKGKIAKNSISLSWQEPDRPNGIILEYEIKYFEKDQETSYTIIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSRRFEFETIPVSVAASSDQSQIPIIAVSVTVGVILLAVVIGFLLSGRRCGYSKAKQDPEEEKMHFHNGHIKLPGVRTYIDPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIAAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKDRNSRPKFDEIVNMLDKLIRNPSSLKTLVNASSRVSSLLVEHGSLGSGAYRSVGEWLEAIKMGRYTEIFMENGYSSMDAVAQVTLEDLRRLGVTLVGHQKKIMNSLQEMKGQLVNGMVPL", "length": 1019, "header": "tr|I3LG48-1|I3LG48_PIG Isoform 1 of receptor protein-tyrosine kinase OS=Sus scrofa OX=9823 GN=EPHA5 PE=4 SV=3 CANONICAL=I3LG48-1" }, "isoforms": [ { "isoform_ac": "A0A287AZC1-1", "url": "https://www.uniprot.org/uniprotkb/I3LG48/entry#A0A287AZC1-1", "sequence": { "sequence": "MRGSGPRGAGRRRPPGGGGGGGDPPNTPASLAGCYSAPRRAPLWTCLLLCAALRTLVASPSNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDGENGRNIKENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDEPPKMHCSAEGEWLVPIGKCMCKAGYEEKNGTCQAPSPVTNVKKGKIAKNSISLSWQEPDRPNGIILEYEIKYFEKDQETSYTIIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSRRFEFETIPVSVAASSDQSQIPIIAVSVTVGVILLAVVIGFLLSGSCCDCGCGRASSLCAVAHPSLIWRCGYSKAKQDPEEEKMHFHNGHIKLPGVRTYIDPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIAAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKDRNSRPKFDEIVNMLDKLIRNPSSLKTLVNASSRVSSLLVEHGSLGSGAYRSVGEWLEAIKMGRYTEIFMENGYSSMDAVAQVTLEDLRRLGVTLVGHQKKIMNSLQEMKGQLVNGMVPL", "length": 877, "header": "tr|A0A287AZC1-1|A0A287AZC1_PIG Computationally mapped isoform of receptor protein-tyrosine kinase OS=Sus scrofa OX=9823 GN=EPHA5 PE=4 SV=3 CANONICAL=I3LG48-1" }, "locus": { "chromosome": "8", "start_pos": 63603974, "end_pos": 63289492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043915.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043915.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049212.3", "url": "https://www.ensembl.org/id/ENSSSCP00000049212.3" } ] } }, { "isoform_ac": "A0A5G2QVP4-1", "url": "https://www.uniprot.org/uniprotkb/I3LG48/entry#A0A5G2QVP4-1", "sequence": { "sequence": "MRGSGPRGAGRRRPPGGGGGGGDPPNTPASLAGCYSAPRRAPLWTCLLLCAALRTLVASPSNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDGENGRNIKENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDEPPKMHCSAEGEWLVPIGKCMCKAGYEEKNGTCQVCRPGFFKASPHSQSCSKCPPHSYTHEEASTSCVCEKDYFRRESDPPTMACTRPPSAPRNAISNVNETSVFLEWIPPADTGGRKDVSYYIACKKCSSHAGVCDECGGHVRYLPQQIGLKNTSVMMVDLLAHTNYTFEIEAVNGVSDLSPGARQYVSVNVTTNQAAPSPVTNVKKGKIAKNSISLSWQEPDRPNGIILEYEIKYFEKDQETSYTIIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSRRFEFETIPVSVAASSDQSQIPIIAVSVTVGVILLAVVIGFLLSGSCCDCGCGRASSLCAVAHPSLIWRCGYSKAKQDPEEEKMHFHNGHIKLPGVRTYIDPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIAAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKDRNSRPKFDEIVNMLDKLIRNPSSLKTLVNASSRVSSLLVEHGSLGSGAYRSVGEWLEAIKMGRYTEIFMENGYSSMDAVAQVTLE", "length": 1007, "header": "tr|A0A5G2QVP4-1|A0A5G2QVP4_PIG Computationally mapped isoform of receptor protein-tyrosine kinase OS=Sus scrofa OX=9823 GN=EPHA5 PE=4 SV=2 CANONICAL=I3LG48-1" }, "locus": { "chromosome": "8", "start_pos": 63603974, "end_pos": 63297637, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087832.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087832.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069029.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069029.2" } ] } }, { "isoform_ac": "I3LG48-1", "url": "https://www.uniprot.org/uniprotkb/I3LG48/entry#I3LG48-1", "sequence": { "sequence": "MRGSGPRGAGRRRPPGGGGGGGDPPNTPASLAGCYSAPRRAPLWTCLLLCAALRTLVASPSNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDGENGRNIKENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDEPPKMHCSAEGEWLVPIGKCMCKAGYEEKNGTCQVCRPGFFKASPHSQSCSKCPPHSYTHEEASTSCVCEKDYFRRESDPPTMACTRPPSAPRNAISNVNETSVFLEWIPPADTGGRKDVSYYIACKKCSSHAGVCDECGGHVRYLPQQIGLKNTSVMMVDLLAHTNYTFEIEAVNGVSDLSPGARQYVSVNVTTNQAAPSPVTNVKKGKIAKNSISLSWQEPDRPNGIILEYEIKYFEKDQETSYTIIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSRRFEFETIPVSVAASSDQSQIPIIAVSVTVGVILLAVVIGFLLSGRRCGYSKAKQDPEEEKMHFHNGHIKLPGVRTYIDPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIAAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKDRNSRPKFDEIVNMLDKLIRNPSSLKTLVNASSRVSSLLVEHGSLGSGAYRSVGEWLEAIKMGRYTEIFMENGYSSMDAVAQVTLEDLRRLGVTLVGHQKKIMNSLQEMKGQLVNGMVPL", "length": 1019, "header": "tr|I3LG48-1|I3LG48_PIG Isoform 1 of receptor protein-tyrosine kinase OS=Sus scrofa OX=9823 GN=EPHA5 PE=4 SV=3 CANONICAL=I3LG48-1" }, "locus": { "chromosome": "8", "start_pos": 63603974, "end_pos": 63289492, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027663.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027663.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023041.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023041.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 584, "start_aa": "Thr", "end_pos": 584, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr584", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2682334", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2682334", "resource": "Reactome", "description": "EPH-Ephrin signaling" }, { "id": "R-SSC-3928663", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928663", "resource": "Reactome", "description": "EPHA-mediated growth cone collapse" }, { "id": "R-SSC-3928665", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928665", "resource": "Reactome", "description": "EPH-ephrin mediated repulsion of cells" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" }, { "name": "transmembrane-ephrin receptor activity", "id": "GO:0005005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005005", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" }, { "name": "ephrin receptor activity", "id": "GO:0005003", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005003", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "ephrin receptor signaling pathway", "id": "GO:0048013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048013", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" }, { "name": "axon guidance", "id": "GO:0007411", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007411", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" }, { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "I3LG48", "url": "https://www.uniprot.org/uniprotkb/I3LG48" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 267, "end_pos": 269, "annotation": "n_glycosylation_sequon" }, { "start_pos": 302, "end_pos": 304, "annotation": "n_glycosylation_sequon" }, { "start_pos": 372, "end_pos": 374, "annotation": "n_glycosylation_sequon" }, { "start_pos": 426, "end_pos": 428, "annotation": "n_glycosylation_sequon" }, { "start_pos": 439, "end_pos": 441, "annotation": "n_glycosylation_sequon" }, { "start_pos": 464, "end_pos": 466, "annotation": "n_glycosylation_sequon" }, { "start_pos": 740, "end_pos": 742, "annotation": "n_glycosylation_sequon" }, { "start_pos": 929, "end_pos": 931, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "10596", "name": "", "equation": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "10596", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/10596" } ] }, { "id": "R-SSC-3928578", "name": "EPH receptors autophosphorylate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928578", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928578" } ] }, { "id": "R-SSC-3928591", "name": "EPH:EFN tetramers oligomerise", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928591", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928591" } ] }, { "id": "R-SSC-3928597", "name": "EPH:EFN dimers tetramerise", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928597", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928597" } ] }, { "id": "R-SSC-3928604", "name": "SFKs phosphorylate VAV2,3", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928604", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928604" } ] }, { "id": "R-SSC-3928607", "name": "p-EPHs bind VAV2,3", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928607", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928607" } ] }, { "id": "R-SSC-3928628", "name": "VAV exchanges GTP for GDP on RAC1, activating it", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928628", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928628" } ] }, { "id": "R-SSC-3928642", "name": "TIAM1 exchanges GTP for GDP on RAC1, activating it", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928642", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928642" } ] }, { "id": "R-SSC-3928646", "name": "EPHAs bind EFNAs", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928646", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928646" } ] }, { "id": "R-SSC-3928651", "name": "NGEF exchanges GTP for GDP on RHOA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-3928651", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928651" } ] }, { "id": "R-SSC-4093327", "name": "EPHA binds TIAM1", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"Domain_Extent_Annotation", "uniprotkb_annotation": "Eph LBD", "eco_id": "ECO_0000259", "start_pos": 63, "end_pos": 241, "start_aa": "Glu", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LG48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG48" }, { "id": "PS50853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 360, "end_pos": 470, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LG48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG48" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 657, "end_pos": 918, "start_aa": "Ile", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LG48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LG48" }, { "id": "PS50105", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50105" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SAM", "eco_id": "ECO_0000259", "start_pos": 947, "end_pos": 1011, "start_aa": "Gly", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 584 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 267, "end_pos": 269 }, { "start_pos": 302, "end_pos": 304 }, { "start_pos": 372, "end_pos": 374 }, { "start_pos": 426, "end_pos": 428 }, { "start_pos": 439, "end_pos": 441 }, { "start_pos": 464, "end_pos": 466 }, { "start_pos": 740, "end_pos": 742 }, { "start_pos": 929, "end_pos": 931 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", 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"id": "PTHR10270", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10270", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10270:SF111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10270:SF111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00505", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00505", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12336", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12336", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3769402", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3769402", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003360512", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003360512", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LG51", "url": "https://www.uniprot.org/uniprotkb/I3LG51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LG51-1", "url": "https://www.uniprot.org/uniprotkb/I3LG51-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRPARDNASGASSLQVPADLARSASSRLPFPPDPPAHRPPSAPPTESSGLFTVAAPAPGAPSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGAGGPAAPGGAGKSGANAAGGANAGGGSGGGASGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPATMSSPPPPPALPQMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAAAAAAMSLGPMGTVVKTEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHSVHQHYQGAGTAVNGTVPLTHI", "length": 448, "header": "tr|I3LG51-1|I3LG51_PIG Isoform 1 of SRY-box transcription factor 3 OS=Sus scrofa OX=9823 GN=SOX3 PE=4 SV=1 CANONICAL=I3LG51-1" }, "isoforms": [ { "isoform_ac": "I3LG51-1", "url": "https://www.uniprot.org/uniprotkb/I3LG51/entry#I3LG51-1", "sequence": { "sequence": 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"glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 92, "start_aa": "Thr", "end_pos": 92, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr92", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LG51", "url": "https://www.uniprot.org/uniprotkb/I3LG51" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623770", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623770", "resource": "KEGG Pathway" }, { "id": "R-SSC-3769402", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3769402", "resource": "Reactome", "description": "Deactivation of the beta-catenin transactivating complex" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MUX6-1", "protein_name": "SRY-box transcription factor 3", "gene_name": "LOC781679", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRPARDHASGASSLRGPADLARTTAASLPFPPDPRAQRPPSAPPTESPGLFTVAAPAPGAPSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGAGGPAAPGGAGKSSANAGGGANAGGGSSGGASAGGGGGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAPPATMSSPPPPPALPQMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGSMAPSAAAAAAAAYGQQPAAAAAAAAAMSLGPMGTVVKTEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHSVHQHYQGAGTAVNGTVPLTHI", "length": 451 }, "evidence": [ { "id": "I3LG51", "url": "https://omabrowser.org/oma/group/I3LG51/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I5ZM42-1", "protein_name": "SRY-box transcription factor 3", "gene_name": "Sox3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRPARENASGERSPRVPADFARSPSASLPFPPELPARRPPSATPTESPGLFTVAAPAPGAPSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAATGGPPAPGAAGKSSANPAGGANAGSGGSGGANGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPQMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHGVHQHYQGAGTAVNGTVPLTHI", "length": 449 }, "evidence": [ { "id": "I3LG51", "url": "https://omabrowser.org/oma/group/I3LG51/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P41225-1", "protein_name": "Transcription factor SOX-3", "gene_name": "SOX3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"I3LG51", "url": "https://www.uniprot.org/uniprotkb/I3LG51" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LG51", "url": "https://www.uniprot.org/uniprotkb/I3LG51" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LG51", "url": "https://www.uniprot.org/uniprotkb/I3LG51" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LG51", "url": "https://www.uniprot.org/uniprotkb/I3LG51" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA 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Classification" ] }, { "id": "IPR050866", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050866", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45638", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45638", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45638:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45638:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00027", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00027", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00520", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00520", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16526", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16526", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "28747", "url": 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"https://www.uniprot.org/uniprotkb/I3LQM4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQM4-1", "url": "https://www.uniprot.org/uniprotkb/I3LQM4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKISTQYSHPTRTHLAVRTTDRDLDHIENGLSRTHSPGEEISTELQEDIAMETRGLAESRRSSFTSQRPARLSRLIISLHAWAARHLHREDQRPDSFLESFRGAELKEVSSRDSHAPSNMGSQEPPDRGRSDWPLARNNTNACNNTEKEKKKETIVVDPSSNLYYHWLTVIAVPVFYNWCLLVCRACFDELQSEHLMLWLVLDYSADILYGLDLLVRARTGFLEQGLMVTDADRLWKHYRKTMHFKLDTLSLVPTDLAFFKVGMNYPELRFNRLLKLARLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEYGRLSRKYIYSLYWSTLTLTTIDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLRKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGITQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAKAGADPKDLEEKVEHLETSLDTLQTRFARLLAEYNATQMKVKQRLSQLESQVKISLPPEGDVPGDVQGDEPQTETKQQ", "length": 675, "header": "tr|I3LG99-1|I3LG99_PIG Isoform 1 of Cyclic nucleotide gated channel subunit alpha 3 OS=Sus scrofa OX=9823 GN=CNGA3 PE=4 SV=3 CANONICAL=I3LG99-1" }, "isoforms": [ { "isoform_ac": "I3LG99-1", "url": "https://www.uniprot.org/uniprotkb/I3LG99/entry#I3LG99-1", "sequence": { "sequence": "MAKISTQYSHPTRTHLAVRTTDRDLDHIENGLSRTHSPGEEISTELQEDIAMETRGLAESRRSSFTSQRPARLSRLIISLHAWAARHLHREDQRPDSFLESFRGAELKEVSSRDSHAPSNMGSQEPPDRGRSDWPLARNNTNACNNTEKEKKKETIVVDPSSNLYYHWLTVIAVPVFYNWCLLVCRACFDELQSEHLMLWLVLDYSADILYGLDLLVRARTGFLEQGLMVTDADRLWKHYRKTMHFKLDTLSLVPTDLAFFKVGMNYPELRFNRLLKLARLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEYGRLSRKYIYSLYWSTLTLTTIDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLRKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGITQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAKAGADPKDLEEKVEHLETSLDTLQTRFARLLAEYNATQMKVKQRLSQLESQVKISLPPEGDVPGDVQGDEPQTETKQQ", "length": 675, "header": "tr|I3LG99-1|I3LG99_PIG Isoform 1 of Cyclic nucleotide gated channel subunit alpha 3 OS=Sus scrofa OX=9823 GN=CNGA3 PE=4 SV=3 CANONICAL=I3LG99-1" }, "locus": { "chromosome": "3", "start_pos": 55903208, "end_pos": 55874539, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032315.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032315.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023092.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023092.3" } ] } }, { "isoform_ac": "I3LQM4-1", "url": "https://www.uniprot.org/uniprotkb/I3LG99/entry#I3LQM4-1", "sequence": { "sequence": "MAKISTQYSHPTRTHLAVRTTDRDLDHIENGLSRLSRLIISLHAWAARHLHREDQRPDSFLESFRGAELKEVSSRDSHAPSNMGSQEPPDRGRRKKKETIVVDPSSNLYYHWLTVIAVPVFYNWCLLVCRACFDELQSEHLMLWLVLDYSADILYGLDLLVRARTGFLEQGLMVTDADRLWKHYRKTMHFKLDTLSLVPTDLAFFKVGMNYPELRFNRLLKLARLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEYGRLSRKYIYSLYWSTLTLTTIDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLRKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGITQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAKAGADPKDLEEKVEHLETSLDTLQTRFARLLAEYNATQMKVKQRLSQLESQLHVRCCMGVGGALYSVRCPQCKSMKV", "length": 618, "header": "tr|I3LQM4-1|I3LG99_PIG Computationally mapped isoform of Cyclic nucleotide gated channel subunit alpha 3 OS=Sus scrofa OX=9823 GN=CNGA3 PE=4 SV=3 CANONICAL=I3LG99-1" }, "locus": { "chromosome": "3", "start_pos": 55903208, "end_pos": 55874253, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029510.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029510.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026404.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026404.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LQM4", "url": "https://www.uniprot.org/uniprotkb/I3LQM4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "calcium channel activity", "id": "GO:0005262", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005262", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" }, { "name": "intracellularly cGMP-activated cation channel activity", "id": "GO:0005223", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005223", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" }, { "name": "intracellularly cAMP-activated cation channel activity", "id": "GO:0005222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005222", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" }, { "name": "cGMP binding", "id": "GO:0030553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030553", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" }, { "name": "intracellular cyclic nucleotide activated cation channel complex", "id": "GO:0017071", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017071", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "retina development in camera-type eye", "id": "GO:0060041", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060041", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" }, { "name": "monoatomic cation transmembrane transport", "id": "GO:0098655", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098655", "evidence": [ { "database": "UniProtKB", "id": "I3LG99", "url": "https://www.uniprot.org/uniprotkb/I3LG99" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 139, "end_pos": 141, "annotation": "n_glycosylation_sequon" }, { "start_pos": 145, "end_pos": 147, "annotation": "n_glycosylation_sequon" }, { "start_pos": 336, "end_pos": 338, "annotation": "n_glycosylation_sequon" }, { "start_pos": 387, "end_pos": 389, "annotation": "n_glycosylation_sequon" }, { "start_pos": 632, "end_pos": 634, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "28747", "name": "", "equation": 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"enzyme_list": [], "evidence": [ { "id": "78547", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/78547" } ] }, { "id": "78551", "name": "", "equation": "Li(+)(in) = Li(+)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "78551", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/78551" } ] }, { "id": "78555", "name": "", "equation": "Cs(+)(in) = Cs(+)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "78555", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/78555" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LG99-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 675, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": 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"https://www.genome.jp/dbget-bin/www_bget?ssc:100514871", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q9UNY5-1", "protein_name": "Zinc finger protein 232", "gene_name": "ZNF232", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPPGPVRGPLQDSSWYEPSAELVQTRMAVSLTAAETLALQGTQGQEKMMMMGPKEEEQSCEYETRLPGNHSTSQEIFRQRFRHLRYQETPGPREALSQLRVLCCEWLRPEKHTKEQILEFLVLEQFLTILPEELQSWVRGHHPKSGEEAVTVLEDLEKGLEPEPQVPGPAHGPAQEEPWEKKESLGAAQEALSIQLQPKETQPFPKSEQVYLHFLSVVTEDGPEPKDKGSLPQPPITEVESQVFSEKLATDTSTFEATSEGTLELQQRNPKAERLRWSPAQEESFRQMVVIHKEIPTGKKDHECSECGKTFIYNSHLVVHQRVHSGEKPYKCSDCGKTFKQSSNLGQHQRIHTGEKPFECNECGKAFRWGAHLVQHQRIHSGEKPYECNECGKAFSQSSYLSQHRRIHSGEKPFICKECGKAYGWCSELIRHRRVHARKEPSH", "length": 444 }, "evidence": [ { "id": "I3LGC5", "url": "https://omabrowser.org/oma/group/I3LGC5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { 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} ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "VSX1", "url": "https://www.uniprot.org/uniprotkb/I3LGC8", "locus": { "chromosome": "17", "start_pos": 30848484, "end_pos": 30856213, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023887", "url": "https://www.ensembl.org/id/ENSSSCG00000023887" } ] } } ], "crossref": [ { "id": "I3LGC8", "url": "https://alphafold.ebi.ac.uk/entry/I3LGC8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023887", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023887", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00086", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100620386", "url": "https://www.ncbi.nlm.nih.gov/gene/100620386", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": 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"Protein Classification" ] }, { "id": "I3LGC8", "url": "https://www.orthodb.org/?gene=I3LGC8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24323", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24323", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24323:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24323:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003359967", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359967", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R555", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R555", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R555-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R555-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGC8-1", "url": "https://www.uniprot.org/uniprotkb/I3LGC8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTGRDALSDGCARSRALVPGGPPTGSRPRGFAITDLLGLEAELPAPAGPGPGSCCEGPAAAPCAGPGLGDSGLARGALPLGFGLLCSFGAQPPAAAGAPCLLLADVPFLPPEGPEPPAPHVLGRSPPTSIRQKRSESVSTSEEDSLPEDRSDLKLPPTPGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPPPDSVLSSAEGGLLGSCAPWLLGMHKKSTGMIKKAESEEKLAGLWGSDHLKEGFSPLQAGPQRGSDEGSPESGQDVAMDLSNSTRQEAKRAPQEAGTQGCSDSEELKGLQPRKGEAL", "length": 364, "header": "tr|I3LGC8-1|I3LGC8_PIG Isoform 1 of Visual system homeobox 1 OS=Sus scrofa OX=9823 GN=VSX1 PE=3 SV=2 CANONICAL=I3LGC8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R555-1", "url": "https://www.uniprot.org/uniprotkb/I3LGC8/entry#A0A5G2R555-1", "sequence": { "sequence": "MTGRDALSDGCARSRALVPGGPPTGSRPRGFAITDLLGLEAELPAPAGPGPGSCCEGPAAAPCAGPGLGDSGLARGALPLGFGLLCSFGAQPPAAAGAPCLLLADVPFLPPEGPEPPAPHVLGRSPPTSIRQKRSESVSTSEEDSLPEDRSDLKLPPTPGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVAPPPKDTSEHLSHAGGC", "length": 227, "header": "tr|A0A5G2R555-1|A0A5G2R555_PIG Computationally mapped isoform of Visual system homeobox 1 OS=Sus scrofa OX=9823 GN=VSX1 PE=4 SV=1 CANONICAL=I3LGC8-1" }, "locus": { "chromosome": "17", "start_pos": 30856014, "end_pos": 30852021, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073186.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073186.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069305.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069305.1" } ] } }, { "isoform_ac": "I3LGC8-1", "url": "https://www.uniprot.org/uniprotkb/I3LGC8/entry#I3LGC8-1", "sequence": { "sequence": "MTGRDALSDGCARSRALVPGGPPTGSRPRGFAITDLLGLEAELPAPAGPGPGSCCEGPAAAPCAGPGLGDSGLARGALPLGFGLLCSFGAQPPAAAGAPCLLLADVPFLPPEGPEPPAPHVLGRSPPTSIRQKRSESVSTSEEDSLPEDRSDLKLPPTPGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPPPDSVLSSAEGGLLGSCAPWLLGMHKKSTGMIKKAESEEKLAGLWGSDHLKEGFSPLQAGPQRGSDEGSPESGQDVAMDLSNSTRQEAKRAPQEAGTQGCSDSEELKGLQPRKGEAL", "length": 364, "header": "tr|I3LGC8-1|I3LGC8_PIG Isoform 1 of Visual system homeobox 1 OS=Sus scrofa OX=9823 GN=VSX1 PE=3 SV=2 CANONICAL=I3LGC8-1" }, "locus": { "chromosome": "17", "start_pos": 30856014, "end_pos": 30849270, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025097.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025097.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023121.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023121.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 158, "start_aa": "Thr", "end_pos": 158, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr158", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620386", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620386", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z532-1", "protein_name": "Visual system homeobox 1", "gene_name": "VSX1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPGRAEPSGGRAAVPVPLPVAVAAAPSPASVRSALPERSARPGGAGLRAKGFAITDLLGLEAELQPPPGAAPGPAGGYEGGGALGLGLGLLCGLAGPGAPCLLPAPLPLLPARGPRPGPPGPPPAARRHKESASDEDSLSGDASELKMPASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESIINSAKSGLVGSCAPWLLGMHKKSMEVSRKAESQEKPADGWQAEQDGEELQGKQASSQRSSEKLGPAKDPEDTAIDLSRTAKQEKRSVLRQCINGDPSTEQKDRDH", "length": 350 }, "evidence": [ { "id": "I3LGC8", "url": "https://omabrowser.org/oma/group/I3LGC8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZQZ0-1", "protein_name": "Visual system homeobox 1", "gene_name": "Vsx1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTGRDGLLDGRSRSRALAPGCPPTGSRLRSFAINDLLGLEADLPTPAEPGLRSNCEAPAEATGPGPGPGLCGTCPARGALPLGLGLLCGFGAQPPSATAARARCLLLADLRLLPPAGPEPAVAQSPVHPPPALGSQQRSENISTSDGDSPSEEKNDPKMSLTLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSADSLQGSCAPWLLGMHKKSTEMRKPESEEKLAGLWELDHLRKGAKKDEDGPERGPGKASLNPEGSLEDVAIDLSSSSRQETKKMPSGSSTQGCTHAPGPQVLQPPQVGAS", "length": 369 }, "evidence": [ { "id": "I3LGC8", "url": "https://omabrowser.org/oma/group/I3LGC8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q91V10-1", "protein_name": "Visual system homeobox 1", "gene_name": "Vsx1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGRDGLSDARSRSRALAPGCPPTGSRLRSFAINDLLGLEADLPTPAEPGLRSNSGDPAEAIGSGPGPGPGLCGSCPARGALPLGLGLLCGFGAQPPSAAAAARARCLLLADLRLLPSAGPEPAVAQGPVHPPPALGSQQRSESVSTSDGDSPSEEKNDPKMSLILGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSADSLQGSCAPWLLGMHKKSTGMRKPESEDKLAGLWEFDHLKKGANKDEDGPERGPDETTQNPENSLEDVAIDLSSSSRQETKKMPPGSSTQLPQPPQVGAS", "length": 363 }, "evidence": [ { "id": "I3LGC8", "url": "https://omabrowser.org/oma/group/I3LGC8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9GMA3-1", "protein_name": "Visual system homeobox 1", "gene_name": "VSX1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGRDALSDGRARSRALVPGGPSTGSRPRGFAITDLLGLEAELPAPEGPGPGSGCEGPAAAPRAGPGLGGSCPARGALPLGLGLLCGFGAQPPAAARAPCLLLADVPFLPPEGPEPLAPRFPGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLGSGEGGLLGSCAPWLLGMHKKSAGTIRKAESEEKLAGLWGSDHLKEGSSPHQAGPQRGLEEGSPVSGVEDVVIDLSSSTRQETDRAQQGVGAQGRPDSEGLEGLQPGKEGAL", "length": 365 }, "evidence": [ { "id": "I3LGC8", "url": "https://omabrowser.org/oma/group/I3LGC8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9NZR4-1", "protein_name": "Visual system homeobox 1", "gene_name": "VSX1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELPAPAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLLLADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHFKEGSSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQETKKVHPGAGAQGGSNSTALEGPQPGKVGAT", "length": 365 }, "evidence": [ { "id": "I3LGC8", "url": "https://omabrowser.org/oma/group/I3LGC8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" }, { "name": "visual perception", "id": "GO:0007601", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007601", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" }, { "name": "neuron development", "id": "GO:0048666", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048666", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3LGC8", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 329, "end_pos": 331, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGC8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 364, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGC8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGC8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" }, { "id": "PS51496", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51496" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CVC", "eco_id": "ECO_0000259", "start_pos": 224, "end_pos": 277, "start_aa": "Lys", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGC8" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Homeobox", "eco_id": "ECO_0000259", "start_pos": 162, "end_pos": 222, "start_aa": "Arg", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 158 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 329, "end_pos": 331 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGD6-1", "uniprot_ac": "I3LGD6", "uniprot_id": "I3LGD6_PIG", "mass": { "chemical_mass": 21064.0, "monoisotopic_mass": 21064.0 }, "refseq": { "ac": "NP_001231076", "name": "translocon-associated protein subunit gamma", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231076" }, "gene_names": [ { "name": "SSR3", "type": "recommended", "evidence": [ { "id": "I3LGD6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGD6" } ] }, { "name": "SSR3", "type": "synonym", "evidence": [ { "id": "NP_001231076", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231076" } ] } ], "protein_names": [ { "name": "Translocon-associated protein subunit gamma", "type": "recommended", "evidence": [ { "id": "I3LGD6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGD6/entry#names_and_taxonomy" } ] }, { "name": "Signal sequence receptor subunit gamma", "type": "synonym", "evidence": [ { "id": "I3LGD6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGD6/entry#names_and_taxonomy" } ] }, { "name": "translocon-associated protein subunit gamma", "type": "synonym", "evidence": [ { "id": "NP_001231076", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231076" } ] } ], "function": [ { "annotation": "TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.", "evidence": [ { "database": "UniProtKB", "id": "I3LGD6", "url": "https://www.uniprot.org/uniprotkb/I3LGD6#function" }, { "database": "UniProtKB", "id": "ARBA00002838", "url": "https://www.uniprot.org/uniprotkb/ARBA00002838#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGD6", "url": "https://www.uniprot.org/uniprotkb/I3LGD6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SSR3", "url": "https://www.uniprot.org/uniprotkb/I3LGD6", "locus": { "chromosome": "13", "start_pos": 96377138, "end_pos": 96390112, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030567", "url": "https://www.ensembl.org/id/ENSSSCG00000030567" } ] } } ], "crossref": [ { "id": "ENSSSCG00000030567", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030567", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100625983", "url": "https://www.ncbi.nlm.nih.gov/gene/100625983", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009779", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009779", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625983", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625983", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PLWLFWR", "url": "https://omabrowser.org/oma/group/PLWLFWR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LGD6", "url": "https://www.orthodb.org/?gene=I3LGD6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13399", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13399", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13399:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13399:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07074", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07074", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231076", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231076", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LGD6", "url": "https://www.uniprot.org/uniprotkb/I3LGD6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGD6-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPKGGSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAVLYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDERILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIALLSTGSK", "length": 185, "header": "tr|I3LGD6-1|I3LGD6_PIG Isoform 1 of Translocon-associated protein subunit gamma OS=Sus scrofa OX=9823 GN=SSR3 PE=1 SV=1 CANONICAL=I3LGD6-1" }, "isoforms": [ { "isoform_ac": "I3LGD6-1", "url": "https://www.uniprot.org/uniprotkb/I3LGD6/entry#I3LGD6-1", "sequence": { "sequence": "MAPKGGSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAVLYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDERILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIALLSTGSK", "length": 185, "header": "tr|I3LGD6-1|I3LGD6_PIG Isoform 1 of Translocon-associated protein subunit gamma OS=Sus scrofa OX=9823 GN=SSR3 PE=1 SV=1 CANONICAL=I3LGD6-1" }, "locus": { "chromosome": "13", "start_pos": 96390095, "end_pos": 96377198, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032102.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032102.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023129.1", "url": "https://www.ensembl.org/id/ENSSSCP00000023129.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", 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"Translocon-associated protein subunit gamma", "gene_name": "SSR3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAPKGGPKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAVLYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDERILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNFNPTVNYILSISASSGLIALLSTGSK", "length": 185 }, "evidence": [ { "id": "I3LGD6", "url": "https://omabrowser.org/oma/group/I3LGD6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55GT5-1", "protein_name": "Translocon-associated protein subunit gamma", "gene_name": "ssr3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAEVDEFSAFRHENDVSIEQRIVYFINSLIVALVPVYLYHAIFFMSIDDHMIIYGSVTLFAAIVLTFAYNNIYRMKRLKLSASREHISIASKNKVGDKKKFAAAQKEVQALVTSHEAIAASIMYNNAVFLICVSIFSFIIFKNVPLVYNYIISISLGAGLTSFLSTSSKH", "length": 170 }, "evidence": [ { "id": "I3LGD6", "url": "https://omabrowser.org/oma/group/I3LGD6/", "database": "OMA" } 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGG0-1", "uniprot_ac": "I3LGG0", "uniprot_id": "I3LGG0_PIG", "mass": { "chemical_mass": 131405.0, "monoisotopic_mass": 131405.0 }, "refseq": { "ac": "XP_003357292", "name": "hephaestin-like protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357292" }, "gene_names": [ { "name": "HEPHL1", "type": "recommended", "evidence": [ { "id": "I3LGG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ] }, { "name": "HEPHL1", "type": "synonym", "evidence": [ { "id": "XP_003357292", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357292" } ] } ], "protein_names": [ { "name": "ferroxidase", "type": "recommended", "evidence": [ { "id": "I3LGG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGG0/entry#names_and_taxonomy" } ] }, { "name": "1.16.3.1", "type": "synonym", "evidence": [ { "id": "I3LGG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGG0/entry#names_and_taxonomy" } ] }, { "name": "hephaestin-like protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003357292", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357292" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HEPHL1", "url": "https://www.uniprot.org/uniprotkb/I3LGG0", "locus": { "chromosome": "9", "start_pos": 26437442, "end_pos": 26355996, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030461", "url": "https://www.ensembl.org/id/ENSSSCG00000030461" } ] } } ], "crossref": [ { "id": "I3LGG0", "url": "https://alphafold.ebi.ac.uk/entry/I3LGG0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030461", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030461", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04222", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04222", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd04224", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04224", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11021", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11021", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11022", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11022", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625356", "url": "https://www.ncbi.nlm.nih.gov/gene/100625356", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002355", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002355", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008972", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008972", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011706", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011706", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011707", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011707", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033138", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033138", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625356", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625356", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PEPDMCV", "url": "https://omabrowser.org/oma/group/PEPDMCV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LGG0", "url": "https://www.orthodb.org/?gene=I3LGG0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11709", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11709", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11709:SF233", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11709:SF233", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07731", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07731", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07732", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07732", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003357292", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357292", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGG0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGG0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPRKRQAACILLTFLGLSGLVGAVTRTYYLGIVEEYWNYVPQGKNIITGRSFSEDKLATLFLERGPNRIGSLYKKAVYRHYTDETYSTEIPKPPWLGFLGPILRAEVGDVIVIHLKNFASRPYSLHPHGVFYNKDSEGALYPDGTSGRNKDDDRVPPGKNYTYVWPVREEYAPAPADANCLTWVYHSHIDAPKDICSGLIGPLLVCKEGILHKYSGTRTDVDREFVIMFTLVDENQSWYLDENIRHFCTDPDSVDKHDAVFQRSNKMHALNGYLFGNFPEPDMCVGESVSWHLFGMGNEIDIHSIYFYGNTFISRGHRTDVVNLFPATFLTTEMIVENPGKWMITCQVSDHLQAGMLGQYNVGNCKSGTSHPKMKGQQRHYFIAAEKILWDYGPQGYNKFSGLPLNASGSGSEFYFTQGDNRIGGRYWKARYTEYVDATFAQRKRLSEAEAHLGILGPVIKAEVGDTLLVTFANKADKVYSILPHGVIYDKASDAAPNLDGFLKPGAHVKPGETFTYRWTVPESVSPTADDPPCLTYLYFSAVEPIKDTSSGLVGPLLVCKKGTLNADGTQKGIDKEFYLLFTVFDENLSRYLDENVQKFTWRPFAVDKEDKEFVKSNRMHAINGYMYGNQPGLTMCKKDRVSWHLIGMGTDTDMHGVYFQGNTIHLRGTHRDSLALFPHVATTAFMQPDRAGIFRVFCSTLHHFERGMNQIYEVSSCGNKDPSEQPYGMIRTFYIAAEEVEWDYAPNKNWEFEKQHLDAGRERHGDIFMNHTENWIGSQYKKVVYREYTNGEFVEIKARLPREEHLALLGPMIHAEVGDSILIVFMNKANRPYSISAQGVEDMDTGRQLQVPITKPGEIKTYRWTVPKRSGPGPSDPNCIPWVYYSTVNFVKDTYSGLMGPLITCREGVLNEKGRRSDVDYEFALLFLVFNENESWYLDENIKKYLNKDPRDFKPSDDFEESNKMHAINGKIFGNLHGLIMNEDSMTNWYLLGIGSEVDIHTVHYHAESFLFKIDKSYREDVYDLFPGTFQTIELFADHPGTWLLHCHVSDHIHAGMETTYTVLQNLDNRILYSTKSPGGAPQPATVPSNEEPGKEQLYFFGKNLGPRGAKAALVILFIIGLFLLMVTVILSLCLRWARKQVAYQEVQSCALPTDAL", "length": 1158, "header": "tr|I3LGG0-1|I3LGG0_PIG Isoform 1 of ferroxidase OS=Sus scrofa OX=9823 GN=HEPHL1 PE=3 SV=2 CANONICAL=I3LGG0-1" }, "isoforms": [ { "isoform_ac": "I3LGG0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGG0/entry#I3LGG0-1", "sequence": { "sequence": "MPRKRQAACILLTFLGLSGLVGAVTRTYYLGIVEEYWNYVPQGKNIITGRSFSEDKLATLFLERGPNRIGSLYKKAVYRHYTDETYSTEIPKPPWLGFLGPILRAEVGDVIVIHLKNFASRPYSLHPHGVFYNKDSEGALYPDGTSGRNKDDDRVPPGKNYTYVWPVREEYAPAPADANCLTWVYHSHIDAPKDICSGLIGPLLVCKEGILHKYSGTRTDVDREFVIMFTLVDENQSWYLDENIRHFCTDPDSVDKHDAVFQRSNKMHALNGYLFGNFPEPDMCVGESVSWHLFGMGNEIDIHSIYFYGNTFISRGHRTDVVNLFPATFLTTEMIVENPGKWMITCQVSDHLQAGMLGQYNVGNCKSGTSHPKMKGQQRHYFIAAEKILWDYGPQGYNKFSGLPLNASGSGSEFYFTQGDNRIGGRYWKARYTEYVDATFAQRKRLSEAEAHLGILGPVIKAEVGDTLLVTFANKADKVYSILPHGVIYDKASDAAPNLDGFLKPGAHVKPGETFTYRWTVPESVSPTADDPPCLTYLYFSAVEPIKDTSSGLVGPLLVCKKGTLNADGTQKGIDKEFYLLFTVFDENLSRYLDENVQKFTWRPFAVDKEDKEFVKSNRMHAINGYMYGNQPGLTMCKKDRVSWHLIGMGTDTDMHGVYFQGNTIHLRGTHRDSLALFPHVATTAFMQPDRAGIFRVFCSTLHHFERGMNQIYEVSSCGNKDPSEQPYGMIRTFYIAAEEVEWDYAPNKNWEFEKQHLDAGRERHGDIFMNHTENWIGSQYKKVVYREYTNGEFVEIKARLPREEHLALLGPMIHAEVGDSILIVFMNKANRPYSISAQGVEDMDTGRQLQVPITKPGEIKTYRWTVPKRSGPGPSDPNCIPWVYYSTVNFVKDTYSGLMGPLITCREGVLNEKGRRSDVDYEFALLFLVFNENESWYLDENIKKYLNKDPRDFKPSDDFEESNKMHAINGKIFGNLHGLIMNEDSMTNWYLLGIGSEVDIHTVHYHAESFLFKIDKSYREDVYDLFPGTFQTIELFADHPGTWLLHCHVSDHIHAGMETTYTVLQNLDNRILYSTKSPGGAPQPATVPSNEEPGKEQLYFFGKNLGPRGAKAALVILFIIGLFLLMVTVILSLCLRWARKQVAYQEVQSCALPTDAL", "length": 1158, "header": "tr|I3LGG0-1|I3LGG0_PIG Isoform 1 of ferroxidase OS=Sus scrofa OX=9823 GN=HEPHL1 PE=3 SV=2 CANONICAL=I3LGG0-1" }, "locus": { "chromosome": "9", "start_pos": 26436438, "end_pos": 26356195, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028395.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028395.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023153.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023153.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625356", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625356", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K8Q3-1", "protein_name": "ferroxidase", "gene_name": "Hephl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFLKQPGGCILLEFLGLLGLVGAVTRTYYIGIVEEYWNYVPQGKDVITGKSFSEDKLATLFLERGPNRIGGIYKKAVYRHFTDGSYSTEIPKPPWLGFLGPILRAEVGDVIVIHLKNFASRPYSLHPHGVFYNKDSEGALYPDGTSGKNKEDDMVPPGKNYTYVWPVREEYAPAPADANCLTWVYHSHIDAPKDICSGLIGPLLVCKEGVLNRHSGARTDVDREFVIMFTLVDENQSWYLDDNIRQFCTNPSSVDKSDAVFQRSNKMHALNGFLFGNLPEPEMCVGESVSWHLFGMGNEIDIHSIYFYGNTFITRGHRADVVNLFPATFLTTEMIVENPGKWMITCQVSDHLQAGMLGQYNVGNCRGNAPHPKMRGQQRRYFIAAEKVLWDYSPQGYDKFTGFPLNTSGSDSAVYFTQADNRIGGKYWKARYTEYVDATFSRRKMPSDSEAHLGILGPVIKAEVGDILLVTFANKADKVYSILPHGVFYDKASDAGPNVDGFLKPGAHVKPGETFTYRWTVPESVSPTDDDPPCLTYLYFSAVQPIKDTSAGLVGPLLVCKKGTLNADGTQKGIDKEFYLLFTVFDENFSSYLDENIQKFTWHPFSVDKEDKEFVKSNRMHAINGYMYGNQPGLSMCKKDRVSWHLIGMGTDTDMHGVYFQGNTIHLRGTHRDSLALFPHMSTTAFMQPDHSGIFKVFCSTLHHFTRGMGQIYEVSSCGNRDPSEPPYGMLRTFYIAAEEVEWDYAPNKNWEFEKQHLDAGGERHGDIFMNHTENWIGSQYRKVVYREYTNGEFVEIKARPPQEEHLQLLGPMIHAEVGDSILIIFKNKASRPYSITAQGVEDSDSGKFLDVPVTKPGEIKTYRWNVPKRSGPGPSDPNCIPWVYFSTANFVKDTYSGLMGPLITCREGVLNEKGRRSDVDYEFALLFLVFNENESWYLDDNIKKYLNKDPRDFRHTDDFEESNRMHAINGKIFGNLPGLIMTEDSMTNWYLLGIGSEVDIHTIHYHAESFLFKIDKSYREDVYDLFPGTFQTIELFADHPGTWLLHCHVSDHIHAGMETTYTVLRNIDNRIPYSTKSPSGAGPHAVTVPSQEQPGQEDLYFFGKSLRPRGAKAALVILFILGLLLLVATVILALRLRSSRRQMAYREVQSCALPTDAL", "length": 1159 }, "evidence": [ { "id": "I3LGG0", "url": "https://omabrowser.org/oma/group/I3LGG0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0XUG3-1", "protein_name": "ferroxidase", "gene_name": "HEPHL1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPPLWGGGCLRTLGFFCLFSVVETRIRTYYLGIVEENWDYAPSGKNLITGQNLLEDKFASVYATRGANRIGRVYKKAIFRQYTDDTYSQEIPKAAWLGFLGPVLKAEEEDVFIIHLKNFASRPYSVHPHGVFYDKDSEGALYPDGTGGKSKEDDFVVPGGNYTYTWPVRKSYSPTLADSNCLTWIYHSHIDTPRDIASGLIGPLLVCKKGTADETSIERTGAANAFALMFSIVDENVSWYLDENINTFCLEPATVNKEDEGFQTSNRMHAINGYIYGNLPGLEMCADTPMSWHLFGMGSEIDIHAAYFYGHTFTNRDQRADVVGLFAATFITAEMTPGNPGRWLITCQVNEHLRGGMEALYDVQICQKNLSRPSPLSHKRRYYIAAEEVLWNYGPDGYDKFTGQGLNATGSESAIYFTQGIDRIGGLYWKVRYVEYTDATFSKRKIQPENMKHLGILGPVIKAEVGDTVLVTFANKARRSYSIMAHGVSFSKLSEGAPYLDGYMKPGAHVKPGETFTYKWRVPENGGPSESDPPCLTYLYYSATDAVKDTNSGLVGPLLVCRKNALNEDGTQKGIDREFYLLFSIFDENDSWYLNKNIEAFTGDPSKVDENDADFKESNKMHAVNGYLFGNLPGLAMCKDDKVSWHLIGLGSHYDMHGVQFQGNNIDLRGTTRDGLALFPHLSGTALMQPDRVGTFKVVCRTFDHFVGGMKHLYEVSSCRNASRAQQQHGAVRLYYIAAEEVEWDYASNKSSAPKIYNVSSNEESYGHIFLSQGEDLIGTKYKKVVYREYTNGNFTERKERTEEEEHLEILGPLLHAEVGDSVLIVFKNKASRPYSVSAHGVEEVGCEEQTEAPITLPGEINTYRWNVPERSGPGKTDPNCITWVYYSTANFVKDTYSGLIGPLVVCRKGILDKNGLRKDIDREFTLLFMVFDENKSWYLKENIETYLHKSPDDFNFTKNFVEGNSKHAINGKIYNSLLGLTMNEGDTTNWYLIGMGNEVDVHTVHFHAQTFIFKTDKGHRGDVFDLFPGTFQTVELVAENPGTWLLHCHVADHIHAGMETTYTINKSELEAPSGGGLTTAAYGTTTAQNRTTTKDPDSQGDNVFGKALNPREASLMLAAFVSVGLILLLTTLAFLSLITHQGSRIQYQALRDKSALLADSL", "length": 1162 }, "evidence": [ { "id": "I3LGG0", "url": "https://omabrowser.org/oma/group/I3LGG0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1N752-1", "protein_name": "ferroxidase", "gene_name": "HEPHL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPWKWQADSILLLTLLGLSGLVGAVTRTYHIGIVEEYWNYVPQGKNVITGKSFAEDKLATLYLERGPNRIGSLYKKAVYRHYTDETYSKEIPKPPWLGFLGPILKAEVGDVIVIHLKNFASRPYSLHPHGVFYNKDSEGALYPDGTSGRNKDDDMVPPGKNYTYVWPVREEYAPAPADANCLTWVYHSHIDAPKDICSGLIGPLLVCKEGILHSYSGTRTDVDREFVIMFTLVDENQSWYLDENIRQFCTDPDSVDKKDAVFQRSNKMHALNGYLFGNFPEPDMCVGESVSWHLFGMGNEIDIHSIYFYGNTFISRGHRTDVVNLFPATFLTIEMIVENPGKWMITCQVSDHLQAGMLGQYNVGNCKSGISHPKMKGQQRRYFIAAEKILWDYGPQGYDKFSGLPLNASGSDSELYFTQGNNRIGGKYWKARYTEYVDATFTRRKRFSEAEAHLGILGPVIKAEVGDTLLVTFANKADKVYSILPHGVIYDKASDAAPNVDGFLKPGAHVKPGEIFTYRWTVPESVSPTADDPPCLTYLYFSAVEPIKDTSSGLVGPLLVCKRGVLNADATQKGIDKEFYLLVTVFDENLSRYLDENIQKFTWHPFSVDKEDKEFVKSNRMHAINGYMYGNQPGLTMCKKDRVSWHLIGMGTDTDMHGVYFQGNTIHLRGTHRDSLALFPHVSTTAFMQPDRAGIFRVFCSTLHHLARGMHQIYEVSSCGNKYPPDQPYGMIRTFYIAAEEVEWDYAPNKNWEFEKQHLDARGERHGDIFMNHTENWIGSQYKKVVYREYTNGEFVEIKARPPREEHLALLGPMIHAEVGDSILIIFMNKASRPYSISAQGVEDVDSGKRLQVPVTKPGEIKTYRWNVPKRSGPGPSDPNCIPWLYYSTVNFVKDTYSGLVGPLITCREGVLNEKGRRSDVDYEFALLFLVFNENESWYLDDNIKKYLNKDPRDFKPSDDFEESNKMHAINGKIYGNLHGLVMNEDTMTNWYLLGVGDEVDIHTIHYHAESFLFKIGKSYREDVHDLFPGTFQTIELFADHPGTWLLHCHVSDHIHAGMETTYTVLRNIDNRIPYSTKSPSGGASGSAPSNEPGEEQLYFFGQSLDPRGARAALVILFVLGLLLLVLSVVLSLKLCSARPRAAYQEVQSCALPTDAL", "length": 1157 }, "evidence": [ { "id": "I3LGG0", "url": "https://omabrowser.org/oma/group/I3LGG0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3V1H3-1", "protein_name": "Ferroxidase HEPHL1", "gene_name": "Hephl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFLKQPGGCILLQFLGLLGLVGAVTRTYYIGIVEEYWNYVPQGKDVITGKSFSEDKLATLFLERGPNRIGGIYKKAVYRHFTDGSYSTEIPKPPWLGFLGPILRAEVGDVIVIHLMNFASRPFSLHPHGVFYDKDSEGALYPDGTSGRNKEDDMVPPGKNYTYVWPVREEYAPAPADANCLTWVYHSHIDAPKDICSGLIGPLLVCKEGVLNRYSGMRTDVDREFVIMFTLVDENQSWYLDDNIKQFCTNPNSVDKSDAVFQRSNKMHALNGFLFGNMPEPEMCVGESVSWHLFGMGNEIDIHSIYFYGNTFITRGHRADVVNLFPATFLTTEMIVENPGKWMITCQVSDHLQAGMLGQYSVGNCRGNAPHPKVQGQQRRYFIAAEKVLWDYGPQGYDKFTGFPLNTSGSDSAVYFTQADNRIGGKYWKARYTEYVDATFSRRKMPSDSEAHLGILGPVIKAEVGDILLVTFANKADKVYSILPHGVFYDKASDAAPNVDGFLKPGAHVKPGETFTYRWTVPESVSPTDEDPPCLTYLYFSAVQPIKDTSAGLVGPLLVCKKGTLNADGTQKGIDKEFYLLFTVFDENFSSYLDENIKKFTWHPFSVDKEDKEFVKSNRMHAVNGYMYGSQPGLSMCKKDRVSWHLIGMGTDTDMHGVYFQGNTIHLRGTHRDSLALFPHMATTAYMQPDHSGIFKVFCSTLPHFTRGMGQIYEISSCGNRDPSEPPYGMLRTFFIAAEEVEWDYAPNKNWEFEKQHLDAGGERHGDIFMNHTENWIGSQYRKVVYREYTNGEFVEIKARPPQEEHLQLLGPMIHAEVGDSILIIFKNKASRPYSIAAQGVEDSNNGKLLNVPVTKPGEIKTYRWNVPKRSGPGPSDPNCIPWVYFSTANFVKDTYSGLMGPLITCREGVLNEKGRRSDVDYEFALLFLVFNENESWYLDDNIKKYLNKDPRDFKHTDDFEESNKMHAINGKIFGNLPGLIMTEDSMTNWYLLGIGSEVDIHTIHYHAESFLFKIDKSYREDVYDLFPGTFQTIELFADHPGTWLLHCHVSDHIHAGMETTYTVLRNIDNRIPYSTKTPSGAGSHAVTVPSQEQPGKEELYFFGKNLRPRGAKAALVILFILGLLLLVATVVLALRLRSSRRQMAYREVQSCALPTDAL", "length": 1159 }, "evidence": [ { "id": "I3LGG0", "url": "https://omabrowser.org/oma/group/I3LGG0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6MZM0-1", "protein_name": "Ferroxidase HEPHL1", "gene_name": "HEPHL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPRKQPAGCIFLLTFLGLSGLVGTVTRTYYIGIVEEYWNYVPQGKNVITGKSFTEDKLATLFLERGPNRIGSIYKKAVYRRFTDGTYSIEIPKPPWLGFLGPILRAEVGDVIVIHLKNFASRPYSLHPHGVFYNKDSEGALYPDGTSGRNKNDDMVPPGKNYTYVWPVREEYAPTPADANCLTWVYHSHIDAPKDICSGLIGPLLVCKEGILNRYSGTRNDVDREFVIMFTLVDENQSWYLNENIKHFCTNPDSVDKKDAVFQRSNKMHALNGYLFGNFPEPDMCVGESVSWHLFGMGNEIDIHSIYFYGNTFISRGHRTDVVNLFPATFLTTEMIAENPGKWMITCQVSDHLQAGMLGQYNVDNCKSDIFYPKMKGQQRRYFIAAEKILWDYAPQGYNKFSGLPLNASGSDSDLYFTQGDNRIGGKYWKVRYTEFVDATFTKRKRLSAEEAHLGILGPVIKAEVGDTLLVTFANKADKVYSILPHGVIYDKASDAAPNLDGFVKPGAHVKPGETFTYKWTVPESVSPTAGDPPCLTYLYFSAVDPIKDTSSGLVGPLLVCKKGVLNADGTQKGIDKEFYLLFTVFDENLSRYFDENIQKFIWHPFSIDKEDKEFVKSNRMHAVNGYMYGNQPGLNMCKRDRVSWHLIGLGTDTDMHGIVFQGNTIHLRGTHRDSLALFPHMATTAFMQPDHAGIFRVFCATMPHLSRGMGQIYEVSSCDNRDPSEQRYGMIRTFYIAAEEVEWDYAPNKNWEFEKQHVDARGERHGDIFMNRTENWIGSQYKKVVYREYTDGEFVEIKARPPREEHLELLGPMIHAEVGNTVLIIFKNKASRPYSISAQGVEEMDSGKQFQVPMTKPGEVKTYRWNIPKRSGPGPSDPNCIPWVYYSTVNFVKDTYSGLMGPLITCRKGVLNEKGRRSDVDYEFALLFLVFNENESWYLDDNIKKYLNKDPRDFKRTDDFEESNRMHAINGKIFGNLHGLIMNEDTMTNWYLLGIGSEVDIHTIHYHAESFLFKIDKSYREDVYDLFPGTFQTIELFADHPGTWLLHCHVSDHIHAGMETTYTVLRNIDNRIPYSTTSPGVASHPATVPSNERPGKEQLYFFGKNLGPTGAKAALVILFIIGLLLLITTVILSLRLCSAMKQTDYQQVQSCALPTDAL", "length": 1159 }, "evidence": [ { "id": "I3LGG0", "url": "https://omabrowser.org/oma/group/I3LGG0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "monoatomic ion transport", "id": "GO:0006811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006811", "evidence": [ { "database": "UniProtKB", "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ], "pmid": "" }, { "name": "intracellular iron ion homeostasis", "id": "GO:0006879", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006879", "evidence": [ { "database": "UniProtKB", "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ], "pmid": "" }, { "name": "ferroxidase activity", "id": "GO:0004322", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004322", "evidence": [ { "database": "UniProtKB", "id": "I3LGG0", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 160, "end_pos": 162, "annotation": "n_glycosylation_sequon" }, { "start_pos": 235, "end_pos": 237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 406, "end_pos": 408, "annotation": "n_glycosylation_sequon" }, { "start_pos": 588, "end_pos": 590, "annotation": "n_glycosylation_sequon" }, { "start_pos": 771, "end_pos": 773, "annotation": "n_glycosylation_sequon" }, { "start_pos": 934, "end_pos": 936, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGG0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1158, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGG0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGG0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGG0" }, { "id": "PF07732", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07732" }, { "id": "PF07731", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07731" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Plastocyanin-like", "eco_id": "ECO_0000259", "start_pos": 98, "end_pos": 206, "start_aa": "Phe", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 160, "end_pos": 162 }, { "start_pos": 235, "end_pos": 237 }, { "start_pos": 406, "end_pos": 408 }, { "start_pos": 588, "end_pos": 590 }, { "start_pos": 771, "end_pos": 773 }, { "start_pos": 934, "end_pos": 936 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGG4-1", "uniprot_ac": "I3LGG4", "uniprot_id": "I3LGG4_PIG", "mass": { "chemical_mass": 43028.0, "monoisotopic_mass": 43028.0 }, "refseq": { "ac": "XP_003135078", "name": "probable G-protein coupled receptor 34", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003135078" }, "gene_names": [ { "name": "GPR34", "type": "recommended", "evidence": [ { "id": "I3LGG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGG4" } ] }, { "name": "GPR34", "type": "synonym", "evidence": [ { "id": "XP_003135078", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003135078" } ] } ], "protein_names": [ { "name": "Probable G-protein coupled receptor 34", "type": "recommended", "evidence": [ { "id": "I3LGG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGG4/entry#names_and_taxonomy" } ] }, { "name": "probable G-protein coupled receptor 34", "type": "synonym", "evidence": [ { "id": "XP_003135078", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003135078" } ] } ], "function": [ { "annotation": "G-protein-coupled receptor of lysophosphatidylserine (LysoPS) that plays different roles in immune response. Acts a damage-sensing receptor that triggers tissue repair upon recognition of dying neutrophils. Mechanistically, apoptotic neutrophils release lysophosphatydilserine that are recognized by type 3 innate lymphoid cells (ILC3s) via GPR34, which activates downstream PI3K-AKT and RAS-ERK signaling pathways leading to STAT3 activation and IL-22 production. Plays an important role in microglial function, controlling morphology and phagocytosis.", "evidence": [ { "database": "UniProtKB", "id": "I3LGG4", "url": "https://www.uniprot.org/uniprotkb/I3LGG4#function" }, { "database": "UniProtKB", "id": "ARBA00045234", "url": "https://www.uniprot.org/uniprotkb/ARBA00045234#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGG4", "url": "https://www.uniprot.org/uniprotkb/I3LGG4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GPR34", "url": "https://www.uniprot.org/uniprotkb/I3LGG4", "locus": { "chromosome": "X", "start_pos": 37313923, "end_pos": 37306509, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022309", "url": "https://www.ensembl.org/id/ENSSSCG00000022309" } ] } } ], "crossref": [ { "id": "ENSSSCG00000022309", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022309", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15148", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15148", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100516349", "url": "https://www.ncbi.nlm.nih.gov/gene/100516349", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100516349", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516349", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CKLVGNL", "url": "https://omabrowser.org/oma/group/CKLVGNL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LGG4", "url": "https://www.orthodb.org/?gene=I3LGG4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24233", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24233", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24233:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24233:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00001", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00001", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003135078", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003135078", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LGG4", "url": "https://www.uniprot.org/uniprotkb/I3LGG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGG4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGG4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRSHTVTMTTASVSSWPCSSQGVHLLTNHSVQSPHNFSGAPNFTACSMDETLLSSVLTTFYSVIFIMGLVGNIIALYVFLGIHRKRNSIQIYLLNVAVADLLLIFCLPFRIMYHINQNKWTLGVILCKVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQSIYVCCAVWIIALAGFLTMIILTLKKGGHNSTMCFHYRDKHNAKGEAIFNFILVVMFWLIFLLIILSYIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTVCFVPYHAFRFVYISAQLNVSSCYWKEIVHKTNEIMLVFSSFNSCLDPVMYFLMSSNIRKIMCQLLSKRFQGEASRSESTSEFKPGYSLHDTSAAAKIQPTS", "length": 378, "header": "tr|I3LGG4-1|I3LGG4_PIG Isoform 1 of Probable G-protein coupled receptor 34 OS=Sus scrofa OX=9823 GN=GPR34 PE=3 SV=1 CANONICAL=I3LGG4-1" }, "isoforms": [ { "isoform_ac": "I3LGG4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGG4/entry#I3LGG4-1", "sequence": { "sequence": "MRSHTVTMTTASVSSWPCSSQGVHLLTNHSVQSPHNFSGAPNFTACSMDETLLSSVLTTFYSVIFIMGLVGNIIALYVFLGIHRKRNSIQIYLLNVAVADLLLIFCLPFRIMYHINQNKWTLGVILCKVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQSIYVCCAVWIIALAGFLTMIILTLKKGGHNSTMCFHYRDKHNAKGEAIFNFILVVMFWLIFLLIILSYIKIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTVCFVPYHAFRFVYISAQLNVSSCYWKEIVHKTNEIMLVFSSFNSCLDPVMYFLMSSNIRKIMCQLLSKRFQGEASRSESTSEFKPGYSLHDTSAAAKIQPTS", "length": 378, "header": "tr|I3LGG4-1|I3LGG4_PIG Isoform 1 of Probable G-protein coupled receptor 34 OS=Sus scrofa OX=9823 GN=GPR34 PE=3 SV=1 CANONICAL=I3LGG4-1" }, "locus": { "chromosome": "X", "start_pos": 37312682, "end_pos": 37311549, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000033537.3", "url": "https://www.ensembl.org/id/ENSSSCT00000033537.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000030652.1", "url": "https://www.ensembl.org/id/ENSSSCP00000030652.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGG4", "url": "https://www.uniprot.org/uniprotkb/I3LGG4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516349", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516349", "resource": 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27, "end_pos": 29, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGI0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 474, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGI0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGI0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGI0" }, { "id": "PS50071", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50071" }, { "id": "PRU00108", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00108" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Homeobox", "eco_id": "ECO_0000259", "start_pos": 188, "end_pos": 248, "start_aa": "Asp", 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"https://www.uniprot.org/uniprotkb/I3LGI4", "locus": { "chromosome": "12", "start_pos": 19879387, "end_pos": 19890314, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029763", "url": "https://www.ensembl.org/id/ENSSSCG00000029763" } ] } } ], "crossref": [ { "id": "I3LGI4", "url": "https://alphafold.ebi.ac.uk/entry/I3LGI4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000029763", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029763", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100624758", "url": "https://www.ncbi.nlm.nih.gov/gene/100624758", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009938", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009938", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624758", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624758", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HKIDMEE", "url": "https://omabrowser.org/oma/group/HKIDMEE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LGI4", "url": "https://www.orthodb.org/?gene=I3LGI4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15225", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15225", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15225:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15225:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07292", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07292", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07334", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07334", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003358072", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358072", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGI4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGI4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSALHALQKKQAQLKMRLWELQQLKMKLRDRESFPPDKVPFPMPEVPLVFRGHIQQGREMAKSVVSNLQICYPLPGGSALVTFDDPNVAKQVLQQKEHTIDMEEFRLRVQVQPLELPMLTTIQVASQMSDKKVFVSGIPAGLKLSEEELLDKLEIFFGKTKNGGGDVETRELLQGGVVLGFTKDEVAQQLCQKGQFSVPLGKQQFPLTVSPYVSGEIQKAEVRSQPVPQSVLVLNIPDVLDGPELQDVLEIHFQKPTRGGGEVEAVTVVPPGQRGLAVFTAKSV", "length": 284, "header": "tr|I3LGI4-1|I3LGI4_PIG Isoform 1 of Interferon induced protein 35 OS=Sus scrofa OX=9823 GN=IFI35 PE=3 SV=2 CANONICAL=I3LGI4-1" }, "isoforms": [ { "isoform_ac": "I3LGI4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGI4/entry#I3LGI4-1", "sequence": { "sequence": "MSALHALQKKQAQLKMRLWELQQLKMKLRDRESFPPDKVPFPMPEVPLVFRGHIQQGREMAKSVVSNLQICYPLPGGSALVTFDDPNVAKQVLQQKEHTIDMEEFRLRVQVQPLELPMLTTIQVASQMSDKKVFVSGIPAGLKLSEEELLDKLEIFFGKTKNGGGDVETRELLQGGVVLGFTKDEVAQQLCQKGQFSVPLGKQQFPLTVSPYVSGEIQKAEVRSQPVPQSVLVLNIPDVLDGPELQDVLEIHFQKPTRGGGEVEAVTVVPPGQRGLAVFTAKSV", "length": 284, "header": "tr|I3LGI4-1|I3LGI4_PIG Isoform 1 of Interferon induced protein 35 OS=Sus scrofa OX=9823 GN=IFI35 PE=3 SV=2 CANONICAL=I3LGI4-1" }, "locus": { "chromosome": "12", "start_pos": 19890180, "end_pos": 19879555, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022593.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022593.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023178.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023178.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624758", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624758", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "P80217-1", "protein_name": "Interferon-induced 35 kDa protein", "gene_name": "IFI35", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSAPLDAALHALQEEQARLKMRLWDLQQLRKELGDSPKDKVPFSVPKIPLVFRGHTQQDPEVPKSLVSNLRIHCPLLAGSALITFDDPKVAEQVLQQKEHTINMEECRLRVQVQPLELPMVTTIQMSSQLSGRRVLVTGFPASLRLSEEELLDKLEIFFGKTRNGGGDVDVRELLPGSVMLGFARDGVAQRLCQIGQFTVPLGGQQVPLRVSPYVNGEIQKAEIRSQPVPRSVLVLNIPDILDGPELHDVLEIHFQKPTRGGGEVEALTVVPQGQQGLAVFTSESG", "length": 286 }, "evidence": [ { "id": "I3LGI4", "url": "https://omabrowser.org/oma/group/I3LGI4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D8C4-1", "protein_name": "Interferon-induced 35 kDa protein homolog", "gene_name": "Ifi35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVTLQTVLYSLQEEQARLKMRLQELQQLKRERTGSPGAKIPFSVPEVPLVFQGQTKQGRQVPKFVVSNLKVCCPLPEGSALVTFEDPKVVDRLLQQKEHRVNLEDCRLRVQVQPLELPVVTNIQVSSQPDNHRVLVSGFPAGLRLSEEELLDKLEIFFGKAKNGGGDVETREMLQGTVMLGFADEEVAQHLCQIGQFRVPLDRQQVLLRVSPYVSGEIQKAEIKFQQAPHSVLVTNIPDVMDAQELHDILEIHFQKPTRGGGEVEALTVVPSGQQGLAIFTSESS", "length": 286 }, "evidence": [ { "id": "I3LGI4", "url": "https://omabrowser.org/oma/group/I3LGI4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LGI4", "url": "https://www.uniprot.org/uniprotkb/I3LGI4" } ], "pmid": "" } ] }, { "name": 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The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal membrane, lysosomal lumen", "input_participant_list": [ "R-ALL-1605715" ], "output_participant_list": [ "R-ALL-1605637" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1605624", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1605624" } ] }, { "id": "R-SSC-1605724", "name": "NEU1,4 hydrolyze PSAP(195-273):GM3:PE", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1605724", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1605724" } ] }, { "id": "R-SSC-1606312", "name": "GLB1 hydrolyzes SapB/C:LacCer", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1606312", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1606312" } ] }, { "id": "R-SSC-1630306", "name": "GLB1 hydrolyses a glycosaminoglycan", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal lumen", "input_participant_list": [ "R-ALL-2104997" ], "output_participant_list": [ "R-ALL-2104995" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1630306", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1630306" } ] }, { "id": "R-SSC-2090079", "name": "GLB1 hydrolyses linker chain(2)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal lumen", "input_participant_list": [ "R-ALL-2090075" ], "output_participant_list": [ "R-ALL-2090063" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2090079", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2090079" } ] }, { "id": "R-SSC-4084999", "name": "NEU1 hydrolyses Neu5Ac from glycoconjugates", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-4084999", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4084999" } ] }, { "id": "R-SSC-6798751", "name": "Exocytosis of azurophil granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, azurophil granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6798751", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798751" } ] }, { "id": "R-SSC-6800434", "name": "Exocytosis of ficolin-rich granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, ficolin-1-rich granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6800434", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6800434" } ] }, { "id": "R-SSC-9638120", "name": "NEU4 hydrolyses Neu5Ac from glycoconjugates", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9638120", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9638120" } ] }, { "id": "R-SSC-9840795", "name": "Beta-galactosidases hydrolyze GM2A:GA1 to GM2A:GA2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. 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"https://www.reactome.org/PathwayBrowser/#R-SSC-76071", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020947233", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020947233", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "21248", "url": "https://www.rhea-db.org/rhea/21248", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPVLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE", "length": 1133, "header": "tr|I3LGN1-1|I3LGN1_PIG Isoform 1 of DNA-directed RNA polymerase subunit beta OS=Sus scrofa OX=9823 GN=POLR3B PE=3 SV=2 CANONICAL=I3LGN1-1" }, "isoforms": [ { "isoform_ac": "I3LGN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1/entry#I3LGN1-1", "sequence": { "sequence": "MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPVLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE", "length": 1133, "header": "tr|I3LGN1-1|I3LGN1_PIG Isoform 1 of DNA-directed RNA polymerase subunit beta OS=Sus scrofa OX=9823 GN=POLR3B PE=3 SV=2 CANONICAL=I3LGN1-1" }, "locus": { "chromosome": "5", "start_pos": 13926539, "end_pos": 13805577, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028672.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028672.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023225.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023225.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102159905", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102159905", "resource": "KEGG Pathway" }, { "id": "R-SSC-76061", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76061", "resource": "Reactome", "description": "RNA Polymerase III Transcription Initiation From Type 1 Promoter" }, { "id": "R-SSC-76066", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76066", "resource": "Reactome", "description": "RNA Polymerase III Transcription Initiation From Type 2 Promoter" }, { "id": "R-SSC-76071", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76071", "resource": "Reactome", "description": "RNA Polymerase III Transcription Initiation From Type 3 Promoter" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0L8N3-1", "protein_name": "DNA-directed RNA polymerase subunit beta", "gene_name": "Polr3b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVLAEEFGSLTPEELAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE", "length": 1133 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QQA2-1", "protein_name": "DNA-directed RNA polymerase subunit beta", "gene_name": "polr3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLQEEFGEMSPQQLAAPVDTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDRKGTVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALRYIGNKVRRQRMWGGPKKTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPTVFLVFLNGNILGVIRDHQKLVYTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKNGKPAVKNKHIEELSQGYRTFEDFLHESLVEYLDVNEENDCNIALYEHMISKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRRYTNQTFDKVMGPMLDAETRKPIWRHSILDADGICSPGEKVENKQVLVNKSMPTVTQTPLEGSAQPGQPQYREVPVSYKGATDSYIEKVMISSNAEDAFLVKILLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE", "length": 1130 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F4KD38-1", "protein_name": "DNA-directed RNA polymerase III subunit 2", "gene_name": "NRPC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGLDQEDLDLTNDDHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSRITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDTVTKFTSALSDSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLTEA", "length": 1161 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "G3HNW4-1", "protein_name": "DNA-directed RNA polymerase subunit beta", "gene_name": "Polr3b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDVLAEEFGSLSPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLALLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTVKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGKFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE", "length": 1133 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P22276-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC2", "gene_name": "RET1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVAATKRRKTHIHKHVKDEAFDDLLKPVYKGKKLTDEINTAQDKWHLLPAFLKVKGLVKQHLDSFNYFVDTDLKKIIKANQLILSDVDPEFYLKYVDIRVGKKSSSSTKDYLTPPHECRLRDMTYSAPIYVDIEYTRGRNIIMHKDVEIGRMPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQLVCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHLNYGVYLNGTLIGSIRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKDIHLRKLLDGELDFDDFLKLGLVEYLDVNEENDSYIALYEKDIVPSMTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFKRIDTLLYLMTYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSIDRGFGRCETRRKTTTVLKRYANHTQDIIGGMRVDENGDPIWQHQSLGPDGLGEVGMKVQSGQIYINKSVPTNSADAPNPNNVNVQTQYREAPVIYRGPEPSHIDQVMMSVSDNDQALIKVLLRQNRRPELGDKFSSRHGQKGVCGIIVKQEDMPFNDQGIVPDIIMNPHGFPSRMTVGKMIELISGKAGVLNGTLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISSDAFEVDVCDKCGLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPRLRLEDIFQQ", "length": 1149 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25167-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC2", "gene_name": "Polr3B", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MVELKMGDHNVEATTWDPGDSKDWSVPIKPLTEKWKLVPAFLQVKGLVKQHIDSFNHFINVDIKKIVKANELVTSGADPLFYLKYLDVRVGKPDIDDGFNITKATTPHECRLRDTTYSAPITVDIEYTRGTQRIKRNNLLIGRMPLMLRCSNCALTGKSEFELSKLNECPLDPGGYFVVRGQEKVILIQEQLSWNKMLTEDFNGVVQCQVTSSTHEKKSRTLVLSKHGKYYLKHNSMTDDIPIVVIFKALGVVSDQEIQSLIGIDSKSQNRFGASLIDAYNLKVFTQQRALEYMGSKLVVKRFQSATTKTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKRLELAGSLLSMMFEDLFKRMNWELKTIADKNIPKVKAAQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTEVEERPVMIVAFNAGVEDIREVSGNPINNPNVFLVFINGNVLGLTLNHKHLVRNLRYMRRKGRMGSYVSVHTSYTQRCIYIHTDGGRLCRPYVIVENRRPLVKQHHLDELNRGIRKFDDFLLDGLIEYLDVNEENDSFIAWNEDQIEDRTTHLEIEPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGMIGYNQKNRIDSLMYNLVYPHAPMVKSKTIELTNFDKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYKNSKCTVKRYANQTFDRIMGPMKDALTNKVIFKHDVLDTDGIVAPGEQVQNKQIMINKEMPAVTSMNPLQGQSAQVPYTAVPISYKGPEPSYIERVMVSANAEEDFLIKILLRQTRIPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDFGICPDMIMNPHGFPSRMTVGKTLELLGGKAGLLEGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFFYSGITGTPLEAYIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDAFEVDVCRTCGRMAYCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILENY", "length": 1137 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P59470-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC2", "gene_name": "Polr3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDVLAEEFGSLTPEQLTAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE", "length": 1133 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54IZ9-1", "protein_name": "DNA-directed RNA polymerase III subunit rpc2", "gene_name": "polr3b", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDPESVGYCNNPDFLHKGSMDELYNISKLTDDIKPVEEKWKLVPAFMKCRGLVKQHIDSFNFFINVEMKKIVKANERLTAENDPSYFVRFTDINVGSPTSTEDNLDSVQLTPQRCRLRDMTYSAPIFVNIEYTRNKQIISKRDVHIGNIPIMLRSSNCVLSKKTPEQMAALGECPMDPGGYFIVRGQEKVILNHEQLSKNRIIIEMDSKGLPSASVTSSTHERKSRTGVTLKNEKLYLKHNTFGEDIPVAIVLKGMGVETDQEMAQLVGSDDVFLNAITPSLEECQKCGVHTAAQALDYLGSRIKVFRRPYGVQNKKTKSEEARDILAGVVLNHVPVRRYNFRLKVIYLSLMIRRIIMASKDKSCLDDKDYYGNKRIELSGQLISLLFEDCFKKFQSELKKSVDQAIAKANRAENLDLPKLIRTDTITNGFTHAISSGQWNLKRFRMERSGVSQVLSRLSYISCMGMMTRIQSQFEKTRKVAGPRSLQPSQWGMLCPSDTPEGEACLHPDTIITMSNGQQKPIRQLKDGDSIITLDPITMEAHSTRIYSHFIKSSSQYGKQLLKITTITGKEIICTNDHRFLTSNGNWKQSKDLLLNDKLFLISSSNQLEFNNNNNENNNENNNDIIEILNENQLINQGVVPIKIIQELKSIELLPLLNNNEKLITISRIIGSIDKIGSNKQNEPIIQYQFNLISDFDQFLKDLQYLGFINPIYKLNEEQQQQQQQKIDHQQQQQQQVEQQQKSIIIDFIGSSFGYFIQSLLNEKNWIEKSNNQFVKKEFLSSFISNVNRIQFNIIEEINQQNNDSNFKILLNYKQQKQQQNEKEERAVVDHDNEIFNIKSLQILLNQFNVISSIDFEESNLIIINSSLKKFIDLINIKFNQKLNNQIIQIREYLNYINYNNNNNNNEEINIKKKDFGYFKKLKIKRNSFEIEIEKIEQLNYQDCPEISDFTTESDYHSMISNGFVSHNCGLVKNFALMSHVTTDDSEGPLLRLAYNLGVQDILLVTGEELNSRNAYLVLLNGQIIGIHNSPDYFVTTLRKMRRAGRIREFVSICKNKAQQTISVACDGGRLCRPVIIVDDQRPRLTQEHIEDLKDGLRTFDDFIREGIIEYLDVNEENDSFLAWREAAIQPWTTHLEIEPFTMLGCVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQLTRIDTLLYLLVHTQRPLCQTRTIDLLNWYKLPAGHNATVAVMSYSGYDIEDALVMNKASLDRGFGRCIVLKKQVTSIKKHGNDTSDRIFPPTPNDLRQPKYGLLDSDGIAKPGELAQKGQILVNKYSPLNTIDATPNPELIPDSAYKSSYMGYKYDNPAFIDKVLLTSGDDEQLLIKMLMRSTRRPELGDKFSSRHGQKGVCGIIVKQEDMPFSDLGICPDIIMNPHGFPSRMTIGKMIELLAGKAGVLSGKFGFGTCFGGDRVENISKVLISKGFSYGGKDYVTSGVTGEPLACFIFFGPIFYQKLKHMVMDKMHARARGPTVTLTRQPTEGRARGGGLRLGEMERDCLIGYGASALIMERLMISSDRFTVYACKNCGFLGYEGYCQYCKSSVDISTIQIPYACKLLFQELQAMNIVPRLKLVDS", "length": 1608 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9NW08-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC2", "gene_name": "POLR3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE", "length": 1133 }, "evidence": [ { "id": "I3LGN1", "url": "https://omabrowser.org/oma/group/I3LGN1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "ribonucleoside binding", "id": "GO:0032549", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032549", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "DNA-directed RNA polymerase activity", "id": "GO:0003899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003899", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "DNA/RNA hybrid binding", "id": "GO:0071667", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071667", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "RNA polymerase III complex", "id": "GO:0005666", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005666", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "defense response to virus", "id": "GO:0051607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051607", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "termination of RNA polymerase III transcription", "id": "GO:0006386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006386", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "positive regulation of innate immune response", "id": "GO:0045089", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045089", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "transcription initiation at RNA polymerase III promoter", "id": "GO:0006384", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006384", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "positive regulation of interferon-beta production", "id": "GO:0032728", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032728", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "DNA-templated transcription elongation", "id": "GO:0006354", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006354", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" }, { "name": "snRNA transcription by RNA polymerase III", "id": "GO:0042796", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042796", "evidence": [ { "database": "UniProtKB", "id": "I3LGN1", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 10, "end_pos": 12, "annotation": "n_glycosylation_sequon" }, { "start_pos": 423, "end_pos": 425, "annotation": "n_glycosylation_sequon" }, { "start_pos": 577, "end_pos": 579, "annotation": "n_glycosylation_sequon" }, { "start_pos": 678, "end_pos": 680, "annotation": "n_glycosylation_sequon" }, { "start_pos": 738, "end_pos": 740, "annotation": "n_glycosylation_sequon" }, { "start_pos": 784, "end_pos": 786, "annotation": "n_glycosylation_sequon" }, { "start_pos": 829, "end_pos": 831, "annotation": "n_glycosylation_sequon" }, { "start_pos": 92, "end_pos": 94, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21248", "name": "", "equation": "RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21248", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21248" } ] }, { "id": "R-SSC-76056", "name": "Recruitment of RNA polymerase III to TFIIIB:TFIIIC:TFIIIA:Type 1 Promoter Complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-76056", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76056" } ] }, { "id": "R-SSC-83803", "name": "Recruitment of RNA Polymerase III to TFIIIB:SNAPc:Type 3 Promoter Complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-83803", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-83803" } ] }, { "id": "R-SSC-83805", "name": "Recruitment of RNA Polymerase III to the TFIIIB:TFIIIC: Type 2 Promoter Complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-83805", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-83805" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" }, { "id": "PF00562", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00562" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DNA-directed RNA polymerase subunit 2 hybrid-binding", "eco_id": "ECO_0000259", "start_pos": 668, "end_pos": 1041, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" }, { "id": "PF04561", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04561" }, { "id": "PF04565", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04565" }, { "id": "PF04566", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04566" }, { "id": "PF04567", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04567" }, { "id": "PF04560", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04560" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNA polymerase Rpb2", "eco_id": "ECO_0000259", "start_pos": 186, "end_pos": 363, "start_aa": "Lys", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGN1" }, { "id": "PF04563", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04563" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNA polymerase beta subunit protrusion", "eco_id": "ECO_0000259", "start_pos": 38, "end_pos": 412, "start_aa": "Gly", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 10, "end_pos": 12 }, { "start_pos": 423, "end_pos": 425 }, { "start_pos": 577, "end_pos": 579 }, { "start_pos": 678, "end_pos": 680 }, { "start_pos": 738, "end_pos": 740 }, { "start_pos": 784, "end_pos": 786 }, { "start_pos": 829, "end_pos": 831 }, { "start_pos": 92, "end_pos": 94 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"uniprot_ac": "I3LGP4", "uniprot_id": "I3LGP4_PIG", "mass": { "chemical_mass": 147740.0, "monoisotopic_mass": 147740.0 }, "refseq": {}, "gene_names": [ { "name": "POLR2B", "type": "recommended", "evidence": [ { "id": "I3LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ] } ], "protein_names": [ { "name": "DNA-directed RNA polymerase subunit beta", "type": "recommended", "evidence": [ { "id": "I3LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGP4/entry#names_and_taxonomy" } ] }, { "name": "2.7.7.6", "type": "synonym", "evidence": [ { "id": "I3LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGP4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4#function" }, { "database": "UniProtKB", "id": "RU363031", "url": "https://www.uniprot.org/uniprotkb/RU363031#function" } ] }, { "annotation": "RNA-dependent RNA polymerase that catalyzes the extension of a non-coding RNA (ncRNA) at the 3'-end using the four ribonucleoside triphosphates as substrates. An internal ncRNA sequence near the 3'-end serves as a template in a single-round Pol II-mediated RNA polymerization reaction. May decrease the stability of ncRNAs that repress Pol II-mediated gene transcription.", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4#function" }, { "database": "UniProtKB", "id": "ARBA00058652", "url": "https://www.uniprot.org/uniprotkb/ARBA00058652#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "POLR2B", "url": "https://www.uniprot.org/uniprotkb/I3LGP4", "locus": { "chromosome": "8", "start_pos": 56285011, "end_pos": 56231789, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022955", "url": "https://www.ensembl.org/id/ENSSSCG00000022955" } ] } } ], "crossref": 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Chem.", "date": "2018", "authors": "Liu Xiangyang, Farnung Lucas, Wigge Christoph, Cramer Patrick", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "29550768", "url": "https://glygen.org/publication/PubMed/29550768" } ] }, { "title": "Structure of activated transcription complex Pol II-DSIF-PAF-SPT6.", "journal": "Nature", "date": "2018", "authors": "Vos SM, Farnung L, Boehning M, Wigge C, Linden A, Urlaub H, Cramer P", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "30135578", "url": "https://glygen.org/publication/PubMed/30135578" } ] }, { "title": "Structure of paused transcription complex Pol II-DSIF-NELF.", "journal": "Nature", "date": "2018", "authors": "Vos SM, Farnung L, Urlaub H, Cramer P", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "30135580", "url": "https://glygen.org/publication/PubMed/30135580" } ] }, { "title": "Structure of complete Pol II-DSIF-PAF-SPT6 transcription complex reveals RTF1 allosteric activation.", "journal": "Nat. 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Biol.", "date": "2020", "authors": "Vos SM, Farnung L, Linden A, Urlaub H, Cramer P", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "32541898", "url": "https://glygen.org/publication/PubMed/32541898" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] }, { "title": "Structural insights into preinitiation complex assembly on core promoters.", "journal": "Science", "date": "2021", "authors": "Chen Xizi, Qi Yilun, Wu Zihan, Wang Xinxin, Li Jiabei, Zhao Dan, Hou Haifeng, Li Yan, Yu Zishuo, Liu Weida, Wang Mo, Ren Yulei, Li Ze, Yang Huirong, Xu Yanhui", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "33795473", "url": "https://glygen.org/publication/PubMed/33795473" } ] }, { "title": "Structures of mammalian RNA polymerase II pre-initiation complexes.", "journal": "Nature", "date": "2021", "authors": "Aibara Shintaro, Schilbach Sandra, Cramer Patrick", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "33902107", "url": "https://glygen.org/publication/PubMed/33902107" } ] }, { "title": "Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2.", "journal": "Commun. 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Biol.", "date": "2023", "authors": "Chen Ying, Kokic Goran, Dienemann Christian, Dybkov Olexandr, Urlaub Henning, Cramer Patrick", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "37932450", "url": "https://glygen.org/publication/PubMed/37932450" } ] }, { "title": "Structural visualization of transcription initiation in action.", "journal": "Science", "date": "2023", "authors": "Chen Xizi, Liu Weida, Wang Qianmin, Wang Xinxin, Ren Yulei, Qu Xuechun, Li Wanjun, Xu Yanhui", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "38127763", "url": "https://glygen.org/publication/PubMed/38127763" } ] }, { "title": "Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing.", "journal": "Mol. Cell", "date": "2024", "authors": "Su Bonnie G, Vos Seychelle M", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "38401543", "url": "https://glygen.org/publication/PubMed/38401543" } ] }, { "title": "Three-step mechanism of promoter escape by RNA polymerase II.", "journal": "Mol. Cell", "date": "2024", "authors": "Zhan Yumeng, Grabbe Frauke, Oberbeckmann Elisa, Dienemann Christian, Cramer Patrick", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "38604172", "url": "https://glygen.org/publication/PubMed/38604172" } ] }, { "title": "Structures of co-transcriptional RNA capping enzymes on paused transcription complex.", "journal": "Nat. Commun.", "date": "2024", "authors": "Li Yan, Wang Qianmin, Xu Yanhui, Li Ze", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "38816438", "url": "https://glygen.org/publication/PubMed/38816438" } ] }, { "title": "STK19 drives transcription-coupled repair by stimulating repair complex stability, RNA Pol II ubiquitylation, and TFIIH recruitment.", "journal": "Mol. Cell", "date": "2024", "authors": "Ramadhin Anisha R, Lee Shun-Hsiao, Zhou Di, Salmazo Anita, Gonzalo-Hansen Camila, van Sluis Marjolein, Blom Cindy M A, Janssens Roel C, Raams Anja, Dekkers Dick, Bezstarosti Karel, Slade Dea, Vermeulen Wim, Pines Alex, Demmers Jeroen A A, Bernecky Carrie, Sixma Titia K, Marteijn Jurgen A", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "39547223", "url": "https://glygen.org/publication/PubMed/39547223" } ] }, { "title": "STK19 facilitates the clearance of lesion-stalled RNAPII during transcription-coupled DNA repair.", "journal": "Cell", "date": "2024", "authors": "van den Heuvel Diana, Rodr\u00edguez-Mart\u00ednez Marta, van der Meer Paula J, Nieto Moreno Nicolas, Park Jiyoung, Kim Hyun-Suk, van Schie Janne J M, Wondergem Annelotte P, D'Souza Areetha, Yakoub George, Herlihy Anna E, Kashyap Krushanka, Boissi\u00e8re Thierry, Walker Jane, Mitter Richard, Apelt Katja, de Lint Klaas, Kird\u00f6k Idil, Ljungman Mats, Wolthuis Rob M F, Cramer Patrick, Sch\u00e4rer Orlando D, Kokic Goran, Svejstrup Jesper Q, Luijsterburg Martijn S", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "39547229", "url": "https://glygen.org/publication/PubMed/39547229" } ] }, { "title": "DSS1 is required for proper Integrator-PP2A function.", "journal": "Nat. Commun.", "date": "2025", "authors": "Xu C., Zheng H., Xu Y., Xiong Y., Cheng J., Zhang Y.J., Huang Z., Song A., Chen F.X., Xu T.T., Zhao W.Y., Zhou Q.X.", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "40617815", "url": "https://glygen.org/publication/PubMed/40617815" } ] }, { "title": "IWS1 positions downstream DNA to globally stimulate Pol II elongation.", "journal": "Nat. Commun.", "date": "2025", "authors": "Yan Y., Urlaub H., Cramer P., Maier K.C., Ochmann M., Zumer K., Walshe J.L., Bauerle M., Neef U., Rus P., Zheenbekova A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "40835814", "url": "https://glygen.org/publication/PubMed/40835814" } ] }, { "title": "Molecular mechanism of co-transcriptional H3K36 methylation by SETD2.", "journal": "Nat. Commun.", "date": "2025", "authors": "Urlaub H., Cramer P., Dybkov O., Dienemann C., Ochmann M., Walshe J.L., Neef U., Oberthur C., Zheenbekova A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "reference": [ { "type": "PubMed", "id": "41162378", "url": "https://glygen.org/publication/PubMed/41162378" } ] } ], "pathway": [ { "id": "R-SSC-112382", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112382", "resource": "Reactome", "description": "Formation of RNA Pol II elongation complex" }, { "id": "R-SSC-113418", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113418", "resource": "Reactome", "description": "Formation of the Early Elongation Complex" }, { "id": "R-SSC-5578749", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5578749", "resource": "Reactome", "description": "Transcriptional regulation by small RNAs" }, { "id": "R-SSC-674695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-674695", "resource": "Reactome", "description": "RNA Polymerase II Pre-transcription Events" }, { "id": "R-SSC-6781823", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781823", "resource": "Reactome", "description": "Formation of TC-NER Pre-Incision Complex" }, { "id": "R-SSC-6782135", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782135", "resource": "Reactome", "description": "Dual incision in TC-NER" }, { "id": "R-SSC-6782210", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782210", "resource": "Reactome", "description": "Gap-filling DNA repair synthesis and ligation in TC-NER" }, { "id": "R-SSC-6796648", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6796648", "resource": "Reactome", "description": "TP53 Regulates Transcription of DNA Repair Genes" }, { "id": "R-SSC-6803529", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6803529", "resource": "Reactome", "description": "FGFR2 alternative splicing" }, { "id": "R-SSC-6807505", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "resource": "Reactome", "description": "RNA polymerase II transcribes snRNA genes" }, { "id": "R-SSC-72086", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72086", "resource": "Reactome", "description": "mRNA Capping" }, { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" }, { "id": "R-SSC-72165", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72165", "resource": "Reactome", "description": "mRNA Splicing - Minor Pathway" }, { "id": "R-SSC-72203", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72203", "resource": "Reactome", "description": "Processing of Capped Intron-Containing Pre-mRNA" }, { "id": "R-SSC-73776", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-73776", "resource": "Reactome", "description": "RNA Polymerase II Promoter Escape" }, { "id": "R-SSC-73779", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-73779", "resource": "Reactome", "description": "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening" }, { "id": "R-SSC-75953", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75953", "resource": "Reactome", "description": "RNA Polymerase II Transcription Initiation" }, { "id": "R-SSC-75955", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75955", "resource": "Reactome", "description": "RNA Polymerase II Transcription Elongation" }, { "id": "R-SSC-76042", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76042", "resource": "Reactome", "description": "RNA Polymerase II Transcription Initiation And Promoter Clearance" }, { "id": "R-SSC-77075", "name": "", "url": 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"UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "ribonucleoside binding", "id": "GO:0032549", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032549", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "DNA-directed RNA polymerase activity", "id": "GO:0003899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003899", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "transcription initiation at RNA polymerase II promoter", "id": "GO:0006367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006367", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "transcription elongation by RNA polymerase II", "id": "GO:0006368", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006368", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "DNA-templated transcription elongation", "id": "GO:0006354", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006354", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "RNA polymerase II, core complex", "id": "GO:0005665", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005665", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" }, { "name": "chromosome, telomeric region", "id": "GO:0000781", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000781", "evidence": [ { "database": "UniProtKB", "id": "I3LGP4", "url": "https://www.uniprot.org/uniprotkb/I3LGP4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1268, "end_pos": 1270, "annotation": "n_glycosylation_sequon" }, { "start_pos": 243, "end_pos": 245, "annotation": "n_glycosylation_sequon" }, { "start_pos": 314, "end_pos": 316, "annotation": "n_glycosylation_sequon" }, { "start_pos": 353, "end_pos": 355, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" }, { "start_pos": 776, "end_pos": 778, "annotation": "n_glycosylation_sequon" }, { "start_pos": 843, "end_pos": 845, "annotation": "n_glycosylation_sequon" }, { "start_pos": 923, "end_pos": 925, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "21248", "name": "", "equation": "RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "21248", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/21248" } ] }, { "id": "77763", "name": "", "equation": "a 3'-end ribonucleotidyl-ribonucleotide-RNA + H2O = a 3'-end ribonucleotide-RNA + a ribonucleoside 5'-phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "77763", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/77763" } ] }, { "id": "R-SSC-109638", "name": "Recruitment of RNA Polymerase II Holoenzyme by TFIIF to the pol II promoter:TFIID:TFIIA:TFIIB complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-109638", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-109638" } ] }, { "id": "R-SSC-109639", "name": "Formation of the closed pre-initiation complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-109639", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-109639" } ] }, { "id": "R-SSC-111264", "name": "Addition of nucleotides between position +11 and +30", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-ALL-9757634" ], "output_participant_list": [ "R-ALL-113541" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-111264", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-111264" } ] }, { "id": "R-SSC-112379", "name": "Recruitment of elongation factors to form elongation complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-112379", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112379" } ] }, { "id": "R-SSC-112381", "name": "Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-54257", "R-SSC-8932787", "R-SSC-8932788", "R-SSC-8932789", "R-SSC-8932790", "R-SSC-8932918" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-112381", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112381" } ] }, { "id": "R-SSC-112383", "name": "Hypophosphorylation of RNA Pol II CTD by FCP1P protein", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-112383", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112383" } ] }, { "id": "R-SSC-112385", "name": "Addition of nucleotides leads to transcript elongation", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-112385", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112385" } ] }, { "id": "R-SSC-112392", "name": "Resumption of elongation after recovery from pausing", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-112392", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112392" } ] }, { "id": "R-SSC-112395", "name": "Abortive termination of elongation after arrest", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-112395", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112395" } ] }, { "id": "R-SSC-112396", "name": "Separation of elongating transcript from template", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-112396", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-112396" } ] }, { "id": "R-SSC-113402", "name": "Formation of DSIF:NELF:early elongation complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113402", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113402" } ] }, { "id": "R-SSC-113407", "name": "DSIF complex binds to RNA Pol II (hypophosphorylated)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113407", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113407" } ] }, { "id": "R-SSC-113409", "name": "Abortive termination of early transcription elongation by DSIF:NELF", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113409", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113409" } ] }, { "id": "R-SSC-113411", "name": "2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113411", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113411" } ] }, { "id": "R-SSC-113412", "name": "Pol II elongation complex moves on the template as transcript elongates", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113412", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113412" } ] }, { "id": "R-SSC-113413", "name": "TFIIS-mediated recovery of elongation from arrest", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113413", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113413" } ] }, { "id": "R-SSC-113414", "name": "7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113414", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113414" } ] }, { "id": "R-SSC-113429", "name": "Elongating transcript encounters a lesion in the template", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113429", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113429" } ] }, { "id": "R-SSC-113430", "name": "Extrusion of 5'-end of 30 nt long transcript through the pore in Pol II complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-113430", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-113430" } ] }, { "id": "R-SSC-5578742", "name": "AGO1,2:small RNA complexes interact with chromatin", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5578742", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5578742" } ] }, { "id": "R-SSC-6781818", "name": "RNA Pol II initiates transcription from damaged DNA template", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6781818", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781818" } ] }, { "id": "R-SSC-6781824", "name": "Active RNA Pol II complex transcribes lesion-containing DNA template", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-ALL-6781829" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6781824", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781824" } ] }, { "id": "R-SSC-6781833", "name": "ERCC8 (CSA) binds stalled RNA Pol II", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6781833", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781833" } ] }, { "id": "R-SSC-6781867", "name": "ERCC8:DDB1:CUL4:RBX1 ubiquitinates ERCC6 and RNA Pol II", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6781867", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6781867" } ] }, { "id": "R-SSC-6782004", "name": "Assembly of the pre-incision complex in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782004", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782004" } ] }, { "id": "R-SSC-6782069", "name": "UVSSA:USP7 deubiquitinates ERCC6", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782069", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782069" } ] }, { "id": "R-SSC-6782131", "name": "ERCC2-facilitated RNA Pol II backtracking in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782131", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782131" } ] }, { "id": "R-SSC-6782138", "name": "ERCC5 and RPA bind TC-NER site", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782138", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782138" } ] }, { "id": "R-SSC-6782141", "name": "Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782141", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782141" } ] }, { "id": "R-SSC-6782204", "name": "5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782204", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782204" } ] }, { "id": "R-SSC-6782208", "name": "Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782208", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782208" } ] }, { "id": "R-SSC-6782211", "name": "DNA polymerases delta, epsilon or kappa bind the TC-NER site", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782211", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782211" } ] }, { "id": "R-SSC-6782224", "name": "3' incision by ERCC5 (XPG) in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782224", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782224" } ] }, { "id": "R-SSC-6782227", "name": "Ligation of newly synthesized repair patch to incised DNA in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6782227", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6782227" } ] }, { "id": "R-SSC-6797606", "name": "CDK12 phosphorylates RNA Pol II CTD at DNA repair genes", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6797606", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6797606" } ] }, { "id": "R-SSC-6797616", "name": "CCNK:CDK12 binds RNA Pol II at DNA repair genes", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6797616", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6797616" } ] }, { "id": "R-SSC-6803523", "name": "PTB and hnRNPA1 bind FGFR2 pre-mRNA to repress IIIb splicing and promote formation of FGFR2c mRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6803523", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6803523" } ] }, { "id": "R-SSC-6810233", "name": "CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6810233", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6810233" } ] }, { "id": "R-SSC-6810235", "name": "RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6810235", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6810235" } ] }, { "id": "R-SSC-6810238", "name": "RNA polymerase II binds initiation factors at promoter of snRNA gene (U1, U2, U4, U4atac, U5, U11, U12)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6810238", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6810238" } ] }, { "id": "R-SSC-6814549", "name": "Pre-snRNA transcript initiation, Integrator binding, LEC binding", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6814549", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6814549" } ] }, { "id": "R-SSC-6814555", "name": "Integrator complex processes the 3' end of snRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6814555", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6814555" } ] }, { "id": "R-SSC-6814559", "name": "Pre-snRNA is elongated and capped with 7-methylguanosine", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6814559", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6814559" } ] }, { "id": "R-SSC-6814885", "name": "CBCAP complex binds 7-methylguanosine cap of snRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6814885", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6814885" } ] }, { "id": "R-SSC-72095", "name": "Internal Methylation of mRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-72095", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72095" } ] }, { "id": "R-SSC-72103", "name": "Formation of pre-mRNPs", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-72103", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72103" } ] }, { "id": "R-SSC-75079", "name": "Formation of AT-AC C complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75079", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75079" } ] }, { "id": "R-SSC-75081", "name": "Formation of AT-AC B Complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75081", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75081" } ] }, { "id": "R-SSC-75082", "name": "ATAC spliceosome mediated Lariat formation,5' splice site cleavage", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75082", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75082" } ] }, { "id": "R-SSC-75083", "name": "ATAC spliceosome mediated 3' splice site cleavage, exon ligation", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75083", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75083" } ] }, { "id": "R-SSC-75095", "name": "Binding of TFIIE to the growing preinitiation complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75095", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75095" } ] }, { "id": "R-SSC-75850", "name": "Addition of the third nucleotide on the nascent transcript", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75850", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75850" } ] }, { "id": "R-SSC-75861", "name": "NTP Binds Active Site of RNA Polymerase II", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75861", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75861" } ] }, { "id": "R-SSC-75862", "name": "Fall Back to Closed Pre-initiation Complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75862", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75862" } ] }, { "id": "R-SSC-75864", "name": "Newly Formed Phosphodiester Bond Stabilized and PPi Released", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75864", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75864" } ] }, { "id": "R-SSC-75866", "name": "Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75866", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75866" } ] }, { "id": "R-SSC-75873", "name": "Addition of Nucleotides 5 through 9 on the growing Transcript", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75873", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75873" } ] }, { "id": "R-SSC-75891", "name": "Abortive Initiation After Second Transition", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75891", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75891" } ] }, { "id": "R-SSC-75949", "name": "RNA Polymerase II Promoter Opening: First Transition", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-75949", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75949" } ] }, { "id": "R-SSC-76576", "name": "Addition of nucleotides 10 and 11 on the growing transcript: Third Transition", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-76576", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76576" } ] }, { "id": "R-SSC-77068", "name": "Activation of GT", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77068", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77068" } ] }, { "id": "R-SSC-77069", "name": "RNA Polymerase II CTD (phosphorylated) binds to CE", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77069", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77069" } ] }, { "id": "R-SSC-77071", "name": "Phosphorylation (Ser5) of RNA pol II CTD", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77071", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77071" } ] }, { "id": "R-SSC-77073", "name": "SPT5 subunit of Pol II binds the RNA triphosphatase (RTP)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77073", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77073" } ] }, { "id": "R-SSC-77077", "name": "Capping complex formation", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77077", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77077" } ] }, { "id": "R-SSC-77078", "name": "Hydrolysis of the 5'-end of the nascent transcript by the capping enzyme", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77078", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77078" } ] }, { "id": "R-SSC-77081", "name": "Formation of the CE:GMP intermediate complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-ALL-113571" ], "output_participant_list": [ "R-ALL-111349" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77081", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77081" } ] }, { "id": "R-SSC-77083", "name": "Transfer of GMP from the capping enzyme GT site to 5'-end of mRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77083", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77083" } ] }, { "id": "R-SSC-77085", "name": "Dissociation of transcript with 5'-GMP from GT", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77085", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77085" } ] }, { "id": "R-SSC-77090", "name": "Methylation of GMP-cap by RNA Methyltransferase", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [ "R-SSC-3009372" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77090", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77090" } ] }, { "id": "R-SSC-77095", "name": "Recognition and binding of the mRNA cap by the cap-binding complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-77095", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77095" } ] }, { "id": "R-SSC-9012315", "name": "ESR1:ESTG:P-TEFb recruited to paused RNA polymerase II on MYB gene", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9012315", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9012315" } ] }, { "id": "R-SSC-9012319", "name": "p-TEFb phosphorylates serine 2 in RNA polymerase II CTD", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9012319", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9012319" } ] }, { "id": "R-SSC-9613494", "name": "Unwinding of DNA for the Nascent Transcript: Second Transition", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9613494", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9613494" } ] }, { "id": "R-SSC-9613497", "name": "Unwinding DNA for the nascent transcript", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9613497", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9613497" } ] }, { "id": "R-SSC-9684118", "name": "ERCC3-facilitated RNA Pol II backtracking in TC-NER", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9684118", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9684118" } ] }, { "id": "R-SSC-9770119", "name": "Formation of the Spliceosomal E complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770119", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770119" } ] }, { "id": "R-SSC-9770141", "name": "Formation of the Spliceosomal C* complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-5688092", "R-SSC-5688093", "R-SSC-72073", "R-SSC-9769591", "R-SSC-9769593", "R-SSC-9769594", "R-SSC-9769596", "R-SSC-9769598", "R-SSC-9769599", "R-SSC-9769601" ], "output_participant_list": [ "R-SSC-72060", "R-SSC-8867898", "R-SSC-9770419", "R-SSC-9770425", "R-SSC-9770427", "R-SSC-9770428", "R-SSC-9770430" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770141", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770141" } ] }, { "id": "R-SSC-9770236", "name": "Formation of the Spliceosomal P complex and exon ligation", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-9769588", "R-SSC-9769590", "R-SSC-9769602" ], "output_participant_list": [ "R-SSC-6791189", "R-SSC-8849139", "R-SSC-8952113", "R-SSC-9769562" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770236", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770236" } ] }, { "id": "R-SSC-9770847", "name": "Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new)", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-5688097", "R-SSC-8869310", "R-SSC-8869311", "R-SSC-9770846" ], "output_participant_list": [ "R-SSC-3900136", "R-SSC-6814858", "R-SSC-8865888", "R-SSC-8865956", "R-SSC-8952110", "R-SSC-9769561", "R-SSC-8867893", "R-SSC-9769592" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770847", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770847" } ] }, { "id": "R-SSC-9794542", "name": "Formation of the Spliceosomal C complex containing intron lariat", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9794542", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9794542" } ] }, { "id": "R-SSC-9970141", "name": "Core CPA complex binds capped pre-mRNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9970141", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9970141" } ] }, { "id": "R-SSC-9970189", "name": "PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-72008" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9970189", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9970189" } ] }, { "id": "R-SSC-9970190", "name": "PP1 dephosphorylates RNA Pol II", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9970190", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9970190" } ] }, { "id": "R-SSC-9970191", "name": "RBBP6 activates CPSF complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9970191", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9970191" } ] }, { "id": "R-SSC-9970318", "name": "PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9970318", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9970318" } ] }, { "id": "R-SSC-9970320", "name": "PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9970320", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9970320" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-111349", "participant_name": "GDP [nucleoplasm]", "crossref": [ { "id": "8145509", "database": "PubChem Substance", "url": "" }, { "id": "17552", "database": "ChEBI", "url": "" }, { "id": "ZINC000008215481", "database": "ZINC", "url": "" }, { "id": "C00035", "database": "COMPOUND", "url": "" }, { "id": "HMDB0001201", "database": "HMDB Metabolite", "url": "" }, { "id": "2410", "database": "Guide to Pharmacology - Ligands", "url": "" } ] }, { "participant_id": "R-ALL-113541", "participant_name": "PPi [nucleoplasm]", "crossref": [ { "id": "PPI", "database": "AraCyc", "url": "" }, { "id": "2466-09-3", "database": "CAS", "url": "" }, { "id": "C00013", "database": "COMPOUND", "url": "" }, { "id": "33019", "database": "ChEBI", "url": "" }, { "id": "1023", "database": "PubChem Compound", "url": "" }, { "id": "ZINC000006827695", "database": "ZINC", "url": "" }, { "id": "2466", "database": "CAS", "url": "" }, { "id": "4097574", "database": "PubChem Compound", "url": "" } ] }, { "participant_id": "R-ALL-113571", "participant_name": "GTP [nucleoplasm]", "crossref": [ { "id": "37565", "database": "ChEBI", "url": "" }, { "id": "ZINC000060094177", "database": "ZINC", "url": "" }, { "id": "C00044", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-6781829", "participant_name": "ribonucleoside triphosphate [nucleoplasm]", "crossref": [ { "id": "17972", "database": "ChEBI", "url": "" }, { "id": "C03802", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-9757634", "participant_name": "NTP [nucleoplasm]", "crossref": [ { "id": "61557", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-SSC-3009372", "participant_name": "phospho-SUPT5H [nucleoplasm]", "crossref": [ { "id": "ENSSSCG00000023556", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000075924", "database": "ENSEMBL", "url": "" }, { "id": "A0A5G2QYQ2", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000069273", "database": "ENSEMBL", "url": "" }, { "id": "93625", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-3900136", "participant_name": "DDX5 [nucleoplasm]", "crossref": [ { "id": "ENSSSCP00000043632", "database": "ENSEMBL", "url": "" }, { "id": "87226", "database": "VGNC", "url": "" }, { "id": "A0A287AHW6", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000032092", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000038465", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-54257", "participant_name": "ELL [nucleoplasm]", "crossref": [ { "id": "A0A4X1U497", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000040181", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000038814", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000041528", "database": "ENSEMBL", "url": "" }, { "id": "XP_020939167.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-5688092", "participant_name": "DHX8 [nucleoplasm]", "crossref": [ { "id": "F1S1H3", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000017378", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000018412", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000018917", "database": "ENSEMBL", "url": "" }, { "id": "87298", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-5688093", "participant_name": "PRPF18 [nucleoplasm]", "crossref": [ { "id": "A0A4X1VY37", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000026354", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000027625", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000024330", "database": "ENSEMBL", "url": "" }, { "id": "NP_001231788.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-5688097", "participant_name": "DHX15 [nucleoplasm]", "crossref": [ { "id": "F1S5A8", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000008756", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000009333", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000009580", "database": "ENSEMBL", "url": "" }, { "id": "87286", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-6791189", "participant_name": "MTREX [nucleoplasm]", "crossref": [ { "id": "F1SLL6", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000017920", "database": "ENSEMBL", "url": "" }, { "id": "90470", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000018417", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000016911", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-6814858", "participant_name": "SRRT [nucleoplasm]", "crossref": [ { "id": "I3LI05", "database": "UniProt", "url": "" }, { "id": "ENSSSCP00000023704", "database": "ENSEMBL", "url": "" }, { "id": "93471", "database": "VGNC", "url": "" }, { "id": "ENSSSCT00000024767", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000024789", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-72008", "participant_name": "PABPN1 [nucleoplasm]", "crossref": [ { "id": "A0A287ASR3", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000054284", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000047125", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000064723", "database": "ENSEMBL", "url": "" }, { "id": "NP_001230477.1", "database": "RefSeq", "url": "" } ] }, { "participant_id": "R-SSC-72060", "participant_name": "DHX38 [nucleoplasm]", "crossref": [ { "id": "F1S3A8", "database": "UniProt", "url": "" }, { "id": "XP_020949516.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCP00000002966", "database": "ENSEMBL", "url": "" }, { "id": "87294", "database": "VGNC", "url": "" }, { "id": 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525779", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525779", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FLPYPKM", "url": "https://omabrowser.org/oma/group/FLPYPKM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LGR3", "url": "https://www.orthodb.org/?gene=I3LGR3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3232118", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3232118", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003131872", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131872", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGR3-1", "url": "https://www.uniprot.org/uniprotkb/I3LGR3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTFPEADIFLKSGDCAGQTMLDTMEAPGHSRQLLLQLNNQRTKGFLCDVIIVVQNALFRAHKNVLAASSAYLKSLVVHDNLLNLDHDMVSPAVFRLVLDFIYTGRLADGAEAAAAAAVAPGAEPSLGAVLAAASYLQIPDLVALCKKRLKRHGKYCHLRGGGGGGGGYAPYGRPGRGLRAATPVIQTCYSSPAGPPPPPTAEPPSGPEAAVNTHCAELYASGPGPAAALCAPERRCSPLCGLDLSKKSPPGSAPPERPPGERELPPRPDSPPSAGPAAYKEPPLALPPLPPLPFQKLEEAGPPPDPFRGSGSPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDDLGRERGSPSERCEERGGDPAASPGGPPLGLAPPPRYPGSLDGPGAGGDGDDYKSSSEETGSSEDPSPPAGHLEGYPCPHLAYGEPESFGDNLYVCIPCGKGFPSSEQLNAHVEAHVEEEEAALYGRAEAAEVAAGAAGLGPPFGGSGDKVAGAPGGLGELLRPYRCASCDKSYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHAVGGAAGAAGALAGLGALPGVPGPDGKGKLDFPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESLYPLAKFTAELGLSPDKAAEVLSQGAHLAAGPDGRTIDRFSPT", "length": 733, "header": "tr|I3LGR3-1|I3LGR3_PIG Isoform 1 of Hypermethylated in cancer 1 protein OS=Sus scrofa OX=9823 GN=HIC1 PE=3 SV=2 CANONICAL=I3LGR3-1" }, "isoforms": [ { "isoform_ac": "I3LGR3-1", "url": "https://www.uniprot.org/uniprotkb/I3LGR3/entry#I3LGR3-1", "sequence": { "sequence": "MTFPEADIFLKSGDCAGQTMLDTMEAPGHSRQLLLQLNNQRTKGFLCDVIIVVQNALFRAHKNVLAASSAYLKSLVVHDNLLNLDHDMVSPAVFRLVLDFIYTGRLADGAEAAAAAAVAPGAEPSLGAVLAAASYLQIPDLVALCKKRLKRHGKYCHLRGGGGGGGGYAPYGRPGRGLRAATPVIQTCYSSPAGPPPPPTAEPPSGPEAAVNTHCAELYASGPGPAAALCAPERRCSPLCGLDLSKKSPPGSAPPERPPGERELPPRPDSPPSAGPAAYKEPPLALPPLPPLPFQKLEEAGPPPDPFRGSGSPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDDLGRERGSPSERCEERGGDPAASPGGPPLGLAPPPRYPGSLDGPGAGGDGDDYKSSSEETGSSEDPSPPAGHLEGYPCPHLAYGEPESFGDNLYVCIPCGKGFPSSEQLNAHVEAHVEEEEAALYGRAEAAEVAAGAAGLGPPFGGSGDKVAGAPGGLGELLRPYRCASCDKSYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHAVGGAAGAAGALAGLGALPGVPGPDGKGKLDFPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESLYPLAKFTAELGLSPDKAAEVLSQGAHLAAGPDGRTIDRFSPT", "length": 733, "header": "tr|I3LGR3-1|I3LGR3_PIG Isoform 1 of Hypermethylated in cancer 1 protein OS=Sus scrofa OX=9823 GN=HIC1 PE=3 SV=2 CANONICAL=I3LGR3-1" }, "locus": { "chromosome": "12", "start_pos": 48171632, "end_pos": 48169099, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027464.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027464.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023257.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023257.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 200, "start_aa": "Thr", "end_pos": 200, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr200", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525779", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525779", "resource": "KEGG Pathway" }, { "id": "R-SSC-3232118", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3232118", "resource": "Reactome", "description": "SUMOylation of transcription factors" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A974-1", "protein_name": "Hypermethylated in cancer 1 protein", "gene_name": "Hic1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLDAMEAPGHSRQLLLQLNNQRTKGFLCDVIIVVQNALFRAHKNVLAASSAYLKSLVVHDNLLNLDHDMVSPAVFRLVLDFIYTGRLTDSVEAAAAAAVAPGAEPSLGAVLAAASYLQIPDLVALCKKRLKRHGKYCHLRGGGSGGGGYAPYGRPGRGLRAATPVIQACYSSPAGPPPPPAAEPPSGPEAAVNTHCAELYASGPGPAASLCAPERRCSPLCGLDLSKKSPPGSSVPERPLSERELPPRPDSPPGAGPAVYKEPPLTLPPLPPLPFQKLEEAVPTPDPFRGSGGSPGPEPPGRPDGSSLLYRWMKHEPGLGSYGDELVRDRGSPGERLEERGGDPAASPGGPPLGLVPPPRYPGSLDGPGTGADGDDYKSSSEETGSSEDPSPPGGHLEGYPCPHLAYGEPESFGDNLYVCIPCGKGFPSSEQLNAHVEAHVEEEEALYGRAEAAEVAAGAAGLGPPFGGGGDKVAGPPGGLGELLRPYRCASCDKSYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHAVGGAAGAAGALAGLGGLPGVPGPDGKGKLDFPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESLYPLAKFTAELGLSPDKAAEVLSQGAHLAAGPDSRTIDRFSPA", "length": 714 }, "evidence": [ { "id": "I3LGR3", "url": "https://omabrowser.org/oma/group/I3LGR3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1ML16-1", "protein_name": "Hypermethylated in cancer 1 protein", "gene_name": "HIC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSEFRNMYTGTFSSKPQFLWGSQVRGWGLQVGTSGRLNLRTGPPPGSSSSSASLHPRCAGRRPWLCRAKYRTAARWRHSCSSARRPGPLQIRVCGKRGGAETRPGRGEDGPAGQTDRGPGGRRAAQRSHVPPWIRRQPGPGLPTCPPGECAGQTMLDTMEAPGHSRQLLLQLNNQRTKGFLCDVIIVVQNALFRAHKNVLAASSAYLKSLVVHDNLLNLDHDMVSPAVFRLVLDFIYTGRLADGAEAAAAAAVAPGAEPSLGAVLAAASYLQIPDLVALCKKRLKRHGKYCHLRGGGGGGGGYAPYGRPGRGLRAATPVIQACYSSPAGPPPPPTAEPPSGPEAAVNTHCAELYASGPGPATALCAPERRCSPLCGLDLSKKSPPGSAPPERPPGERELPPRPDSPPSAGPAAYKEPPLTLPPLPPLPFQKLEEAGPPPDPFRGGGGSPGSEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGSPSERCEERGGDPSASPGGPPLGLAPPPRYAGSLDGPGAGGDGDDYKSSSEETGSSEDPSPPGGHLEGYPCPHLAYGEPESFGDNLYVCIPCGKGFPSSEQLNAHVEAHVEEEEALYGRAEAAEVAAGAAGLGPPFGGGGDKVAGAPGGLGELLRPYRCASCDKSYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHAVGGAAGAAGALAGLGGLPGVPGPDGKGKLDFPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESLYPLAKFTAELGLSPDKAAEVLSQGAHLAAGPDGRTIDRFSPT", "length": 868 }, "evidence": [ { "id": "I3LGR3", "url": "https://omabrowser.org/oma/group/I3LGR3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q14526-1", "protein_name": "Hypermethylated in cancer 1 protein", "gene_name": "HIC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTFPEADILLKSGECAGQTMLDTMEAPGHSRQLLLQLNNQRTKGFLCDVIIVVQNALFRAHKNVLAASSAYLKSLVVHDNLLNLDHDMVSPAVFRLVLDFIYTGRLADGAEAAAAAAVAPGAEPSLGAVLAAASYLQIPDLVALCKKRLKRHGKYCHLRGGGGGGGGYAPYGRPGRGLRAATPVIQACYPSPVGPPPPPAAEPPSGPEAAVNTHCAELYASGPGPAAALCASERRCSPLCGLDLSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLALPSLPPLPFQKLEEAAPPSDPFRGGSGSPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGSPSERCEERGGDAAVSPGGPPLGLAPPPRYPGSLDGPGAGGDGDDYKSSSEETGSSEDPSPPGGHLEGYPCPHLAYGEPESFGDNLYVCIPCGKGFPSSEQLNAHVEAHVEEEEALYGRAEAAEVAAGAAGLGPPFGGGGDKVAGAPGGLGELLRPYRCASCDKSYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHAVGGAAGAAGALAGLGGLPGVPGPDGKGKLDFPEGVFAVARLTAEQLSLKQQDKAAAAELLAQTTHFLHDPKVALESLYPLAKFTAELGLSPDKAAEVLSQGAHLAAGPDGRTIDRFSPT", "length": 733 }, "evidence": [ { "id": "I3LGR3", "url": "https://omabrowser.org/oma/group/I3LGR3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "intrinsic apoptotic signaling pathway in response to DNA damage", "id": "GO:0008630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008630", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "negative regulation of Wnt signaling pathway", "id": "GO:0030178", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030178", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "positive regulation of DNA damage response, signal transduction by p53 class mediator", "id": "GO:0043517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043517", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "histone deacetylase binding", "id": "GO:0042826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042826", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" }, { "name": "sequence-specific double-stranded DNA binding", "id": "GO:1990837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990837", "evidence": [ { "database": "UniProtKB", "id": "I3LGR3", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 47, "end_pos": 110, "start_aa": "Cys", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGR3" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 436, "end_pos": 463, "start_aa": "Tyr", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 200 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGV6-1", "uniprot_ac": "I3LGV6", "uniprot_id": "I3LGV6_PIG", "mass": { "chemical_mass": 72501.0, "monoisotopic_mass": 72501.0 }, "refseq": { "ac": "XP_005655548", "name": "GTP-binding protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655548" }, "gene_names": [ { "name": "GTPBP1", "type": "recommended", "evidence": [ { "id": "I3LGV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ] }, { "name": "GTPBP1", "type": "synonym", "evidence": [ { "id": "XP_005655548", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655548" } ] } ], "protein_names": [ { "name": "GTP-binding protein 1", "type": "recommended", "evidence": [ { "id": "I3LGV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGV6/entry#names_and_taxonomy" } ] }, { "name": "3.6.5.3", "type": "synonym", "evidence": [ { "id": "I3LGV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGV6/entry#names_and_taxonomy" } ] }, { "name": "GTP-binding protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005655548", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655548" } ] } ], "function": [ { "annotation": "GTPase that plays a role in the elongation phase of protein synthesis by forming ternary complexes with GTP and aminoacyl-transfer RNAs (aa-tRNAs), and delivering aa-tRNAs to the ribosomal A site in a GTP-dependent manner. Is also able to deliver deacylated tRNA to the A site. Additionally, it is involved in RNA quality control; after GTP hydrolysis, which is not immediately followed by rapid peptide bond formation, GTPBP1 likely retains aa-tRNA in the A site and promotes exosomal degradation of faulty mRNAs engaged in 80S elongation complexes. Plays a role in the regulation of circadian mRNA stability.", "evidence": [ { "database": "UniProtKB", "id": "A0A287BQ09", "url": "https://www.uniprot.org/uniprotkb/A0A287BQ09#function" }, { "database": "UniProtKB", "id": "ARBA00094218", "url": "https://www.uniprot.org/uniprotkb/ARBA00094218#function" }, { "database": "UniProtKB", "id": "A0A287AAV0", "url": "https://www.uniprot.org/uniprotkb/A0A287AAV0#function" }, { "database": "UniProtKB", "id": "F1SNX7", "url": "https://www.uniprot.org/uniprotkb/F1SNX7#function" }, { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GTPBP1", "url": "https://www.uniprot.org/uniprotkb/I3LGV6", "locus": { "chromosome": "5", "start_pos": 9247203, "end_pos": 9321899, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000095", "url": "https://www.ensembl.org/id/ENSSSCG00000000095" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000095", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000095", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03694", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03694", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd03708", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03708", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd04165", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04165", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520611", "url": "https://www.ncbi.nlm.nih.gov/gene/100520611", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000795", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000795", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004161", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004161", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009001", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009001", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035531", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035531", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520611", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520611", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LGV6", "url": "https://www.orthodb.org/?gene=I3LGV6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43721", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43721", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43721:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43721:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00009", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00009", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03144", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03144", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005655548", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655548", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "19669", "url": "https://www.rhea-db.org/rhea/19669", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AAV0", "url": "https://www.uniprot.org/uniprotkb/A0A287AAV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAV0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQ09", "url": "https://www.uniprot.org/uniprotkb/A0A287BQ09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQ09-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQ09-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNX7", "url": "https://www.uniprot.org/uniprotkb/F1SNX7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNX7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNX7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGV6-1", "url": "https://www.uniprot.org/uniprotkb/I3LGV6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAERSRSPMDSPVPASMFAPEPSSPGAAKAAAAAARLHGGFDSDCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKREEGGSSGGPAVGAPPPGDEACSLGAPQPAASSSLQPQPKPSSGGRRRGGQRHKVKSQGACMTPASGC", "length": 669, "header": "tr|I3LGV6-1|I3LGV6_PIG Isoform 1 of GTP-binding protein 1 OS=Sus scrofa OX=9823 GN=GTPBP1 PE=1 SV=2 CANONICAL=I3LGV6-1" }, "isoforms": [ { "isoform_ac": "A0A287AAV0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGV6/entry#A0A287AAV0-1", "sequence": { "sequence": "MAAERSRSPMDSPVPASMFAPEPSSPGAAKAAAAAARLHGGFDSDCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKREEGGSSGGPAVGAPPPGDEACSLGAPQPAASSSLQPQVGVLPGPVLGPAIPGQGRGARLCRRLRRAQAAPAGLPCCGARRRVFPSTPGP", "length": 691, "header": "tr|A0A287AAV0-1|A0A287AAV0_PIG Computationally mapped isoform of GTP-binding protein 1 OS=Sus scrofa OX=9823 GN=GTPBP1 PE=1 SV=1 CANONICAL=I3LGV6-1" }, "locus": { "chromosome": "5", "start_pos": 9319131, "end_pos": 9297969, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060163.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060163.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041084.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041084.2" } ] } }, { "isoform_ac": "A0A287BQ09-1", "url": "https://www.uniprot.org/uniprotkb/I3LGV6/entry#A0A287BQ09-1", "sequence": { "sequence": "MAAERSRSPMDSPVPASMFAPEPSSPGAAKAAAAAARLHGGFDSDCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKREEGGSSGGPAVGAPPPGDEACSLGAPQPAASSSLQPQPTPSCARSFKKLLSGRGLGRGGGPASVG", "length": 667, "header": "tr|A0A287BQ09-1|A0A287BQ09_PIG Computationally mapped isoform of GTP-binding protein 1 OS=Sus scrofa OX=9823 GN=GTPBP1 PE=1 SV=1 CANONICAL=I3LGV6-1" }, "locus": { "chromosome": "5", "start_pos": 9319131, "end_pos": 9247206, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062626.2", "url": "https://www.ensembl.org/id/ENSSSCT00000062626.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058192.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058192.1" } ] } }, { "isoform_ac": "F1SNX7-1", "url": "https://www.uniprot.org/uniprotkb/I3LGV6/entry#F1SNX7-1", "sequence": { "sequence": "MAAERSRSPMDSPVPASMFAPEPSSPGAAKAAAAAARLHGGFDSDCSEDGEALNGEPELDLTSKLVLVSPTSEQETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKREEGGSSGGPAVGAPPPGDEACSLGAPQPAASSSLQPQPKPSSGGRRRGGQRHKVKSQGACMTPASGC", "length": 652, "header": "tr|F1SNX7-1|F1SNX7_PIG Computationally mapped isoform of GTP-binding protein 1 OS=Sus scrofa OX=9823 GN=GTPBP1 PE=1 SV=3 CANONICAL=I3LGV6-1" }, "locus": { "chromosome": "5", "start_pos": 9319131, "end_pos": 9296856, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000101.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000101.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000099.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000099.4" } ] } }, { "isoform_ac": "I3LGV6-1", "url": "https://www.uniprot.org/uniprotkb/I3LGV6/entry#I3LGV6-1", "sequence": { "sequence": "MAAERSRSPMDSPVPASMFAPEPSSPGAAKAAAAAARLHGGFDSDCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKREEGGSSGGPAVGAPPPGDEACSLGAPQPAASSSLQPQPKPSSGGRRRGGQRHKVKSQGACMTPASGC", "length": 669, "header": "tr|I3LGV6-1|I3LGV6_PIG Isoform 1 of GTP-binding protein 1 OS=Sus scrofa OX=9823 GN=GTPBP1 PE=1 SV=2 CANONICAL=I3LGV6-1" }, "locus": { "chromosome": "5", "start_pos": 9319131, "end_pos": 9296856, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029543.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029543.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023300.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023300.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520611", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520611", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" }, { "name": "translation elongation factor activity", "id": "GO:0003746", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003746", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" }, { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" }, { "name": "alpha-aminoacyl-tRNA binding", "id": "GO:1904678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904678", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "translational elongation", "id": "GO:0006414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006414", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" }, { "name": "RNA surveillance", "id": "GO:0071025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071025", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" }, { "name": "cytoplasmic translation", "id": "GO:0002181", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002181", "evidence": [ { "database": "UniProtKB", "id": "I3LGV6", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 353, "end_pos": 355, "annotation": "n_glycosylation_sequon" }, { "start_pos": 367, "end_pos": 369, "annotation": "n_glycosylation_sequon" }, { "start_pos": 424, "end_pos": 426, "annotation": "n_glycosylation_sequon" }, { "start_pos": 578, "end_pos": 580, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19669", "name": "", "equation": "GTP + H2O = GDP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19669", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19669" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGV6" }, { "id": "PS51722", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51722" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tr-type G", "eco_id": "ECO_0000259", "start_pos": 158, "end_pos": 389, "start_aa": "Phe", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 353, "end_pos": 355 }, { "start_pos": 367, "end_pos": 369 }, { "start_pos": 424, "end_pos": 426 }, { "start_pos": 578, "end_pos": 580 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGW2-1", "uniprot_ac": "I3LGW2", "uniprot_id": "I3LGW2_PIG", "mass": { "chemical_mass": 29579.0, "monoisotopic_mass": 29579.0 }, "refseq": {}, "gene_names": [ { "name": "LYL1", "type": "recommended", "evidence": [ { "id": "I3LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ] } ], "protein_names": [ { "name": "LYL1 basic helix-loop-helix family member", "type": "synonym", "evidence": [ { "id": "I3LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGW2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LYL1", "url": "https://www.uniprot.org/uniprotkb/I3LGW2", "locus": { "chromosome": "2", "start_pos": 65955011, "end_pos": 65952519, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024549", "url": "https://www.ensembl.org/id/ENSSSCG00000024549" } ] } } ], "crossref": [ { "id": "I3LGW2", "url": "https://alphafold.ebi.ac.uk/entry/I3LGW2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024549", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024549", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19705", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19705", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR011598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036638", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036638", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040238", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040238", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR13864", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13864", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13864:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13864:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00010", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00010", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGW2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGW2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCPPEAQAEVGPTMTEKAKMVCAPSPVPAPPKPASPGPPKAEEVGHRGSSPPRLPPGVPVISLGHTRPPGAAMASTELSALRPPLLQLSTLGTTPPPLALHYHPHPFLNSLYIGPAGPFSIFPSSRLKRRPSHCELELAEGHQPHKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGSASPGPRKRPAHRGLDDGARRGLCHGAEVVARPQPAPVAGPDGSPGGAARPIKTEQAAVSPEVR", "length": 278, "header": "tr|I3LGW2-1|I3LGW2_PIG Isoform 1 of LYL1 basic helix-loop-helix family member OS=Sus scrofa OX=9823 GN=LYL1 PE=4 SV=3 CANONICAL=I3LGW2-1" }, "isoforms": [ { "isoform_ac": "I3LGW2-1", "url": "https://www.uniprot.org/uniprotkb/I3LGW2/entry#I3LGW2-1", "sequence": { "sequence": "MCPPEAQAEVGPTMTEKAKMVCAPSPVPAPPKPASPGPPKAEEVGHRGSSPPRLPPGVPVISLGHTRPPGAAMASTELSALRPPLLQLSTLGTTPPPLALHYHPHPFLNSLYIGPAGPFSIFPSSRLKRRPSHCELELAEGHQPHKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGSASPGPRKRPAHRGLDDGARRGLCHGAEVVARPQPAPVAGPDGSPGGAARPIKTEQAAVSPEVR", "length": 278, "header": "tr|I3LGW2-1|I3LGW2_PIG Isoform 1 of LYL1 basic helix-loop-helix family member OS=Sus scrofa OX=9823 GN=LYL1 PE=4 SV=3 CANONICAL=I3LGW2-1" }, "locus": { "chromosome": "2", "start_pos": 65954291, "end_pos": 65952519, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029638.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029638.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023306.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023306.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 13, "start_aa": "Thr", "end_pos": 13, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr13", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" }, { "name": "B cell differentiation", "id": "GO:0030183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030183", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" }, { "name": "blood vessel maturation", "id": "GO:0001955", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001955", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" }, { "name": "definitive hemopoiesis", "id": "GO:0060216", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060216", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3LGW2", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGW2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 278, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGW2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGW2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGW2" }, { "id": "PS50888", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50888" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BHLH", "eco_id": "ECO_0000259", "start_pos": 148, "end_pos": 200, "start_aa": "Ala", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 13 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGX0-1", "uniprot_ac": "I3LGX0", "uniprot_id": "I3LGX0_PIG", "mass": { "chemical_mass": 57556.0, "monoisotopic_mass": 57556.0 }, "refseq": {}, "gene_names": [ { "name": "PPIL4", "type": "recommended", "evidence": [ { "id": "I3LGX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ] } ], "protein_names": [ { "name": "Peptidyl-prolyl cis-trans isomerase", "type": "recommended", "evidence": [ { "id": "I3LGX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX0/entry#names_and_taxonomy" } ] }, { "name": "5.2.1.8", "type": "synonym", "evidence": [ { "id": "I3LGX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX0/entry#names_and_taxonomy" } ] }, { "name": "PPIase", "type": "synonym", "evidence": [ { "id": "I3LGX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX0/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.", "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0#function" }, { "database": "UniProtKB", "id": "RU365081", "url": "https://www.uniprot.org/uniprotkb/RU365081#function" }, { "database": "UniProtKB", "id": "ARBA00002388", "url": "https://www.uniprot.org/uniprotkb/ARBA00002388#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPIL4", "url": "https://www.uniprot.org/uniprotkb/I3LGX0", "locus": { "chromosome": "1", "start_pos": 16446854, "end_pos": 16400983, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028867", "url": "https://www.ensembl.org/id/ENSSSCG00000028867" } ] } } ], "crossref": [ { "id": "I3LGX0", "url": "https://alphafold.ebi.ac.uk/entry/I3LGX0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028867", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028867", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01921", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01921", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12235", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12235", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035538", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035538", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035542", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035542", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45843", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45843", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45843:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45843:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00160", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00160", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-72163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "16237", "url": "https://www.rhea-db.org/rhea/16237", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGX0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGX0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESVFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGDNLDYLDGVHTVFGEVTEGMDIIKKINETFVDKDFVPYQDIRINHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAKTQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQSVAKVKWKGKGGKYTKSDFKEYEKEQDKPSNLVLKDKVKPKQDCYSAKYDLVLDEQAEDSKSSHSHTSKKHKKKTRHCSEEKEDEDYMPIRNTNQDIYREMGFGHYEEEESCWEKQKNEKRDRPQNRSRSRSRERDGHYSNSHKPKYQPDPYERERSKKRDRSRSPKKSKDKEKSKYR", "length": 495, "header": "tr|I3LGX0-1|I3LGX0_PIG Isoform 1 of Peptidyl-prolyl cis-trans isomerase OS=Sus scrofa OX=9823 GN=PPIL4 PE=1 SV=3 CANONICAL=I3LGX0-1" }, "isoforms": [ { "isoform_ac": "I3LGX0-1", "url": "https://www.uniprot.org/uniprotkb/I3LGX0/entry#I3LGX0-1", "sequence": { "sequence": "MAVLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESVFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGDNLDYLDGVHTVFGEVTEGMDIIKKINETFVDKDFVPYQDIRINHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAKTQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQSVAKVKWKGKGGKYTKSDFKEYEKEQDKPSNLVLKDKVKPKQDCYSAKYDLVLDEQAEDSKSSHSHTSKKHKKKTRHCSEEKEDEDYMPIRNTNQDIYREMGFGHYEEEESCWEKQKNEKRDRPQNRSRSRSRERDGHYSNSHKPKYQPDPYERERSKKRDRSRSPKKSKDKEKSKYR", "length": 495, "header": "tr|I3LGX0-1|I3LGX0_PIG Isoform 1 of Peptidyl-prolyl cis-trans isomerase OS=Sus scrofa OX=9823 GN=PPIL4 PE=1 SV=3 CANONICAL=I3LGX0-1" }, "locus": { "chromosome": "1", "start_pos": 16443105, "end_pos": 16401018, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024741.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024741.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023314.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023314.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ], "pmid": "" }, { "name": "peptidyl-prolyl cis-trans isomerase activity", "id": "GO:0003755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003755", "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LGX0", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 443, "end_pos": 445, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16237", "name": "", "equation": "[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16237", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16237" } ] }, { "id": "R-SSC-9770141", "name": "Formation of the Spliceosomal C* complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-5688092", "R-SSC-5688093", "R-SSC-72073", "R-SSC-9769591", "R-SSC-9769593", "R-SSC-9769594", "R-SSC-9769596", "R-SSC-9769598", "R-SSC-9769599", "R-SSC-9769601" ], "output_participant_list": [ "R-SSC-72060", "R-SSC-8867898", "R-SSC-9770419", "R-SSC-9770425", "R-SSC-9770427", "R-SSC-9770428", "R-SSC-9770430" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770141", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770141" } ] }, { "id": "R-SSC-9770236", "name": "Formation of the Spliceosomal P complex and exon ligation", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [ "R-SSC-9769588", "R-SSC-9769590", "R-SSC-9769602" ], "output_participant_list": [ "R-SSC-6791189", "R-SSC-8849139", "R-SSC-8952113", "R-SSC-9769562" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9770236", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770236" } ] }, { "id": "R-SSC-9794542", "name": "Formation of the Spliceosomal C complex containing intron lariat", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9794542", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9794542" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-5688092", "participant_name": "DHX8 [nucleoplasm]", "crossref": [ { "id": "F1S1H3", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000017378", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000018412", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000018917", "database": "ENSEMBL", "url": "" }, { "id": "87298", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-5688093", "participant_name": "PRPF18 [nucleoplasm]", "crossref": [ { "id": "A0A4X1VY37", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000026354", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000027625", 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"ENSSSCT00000019367", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCG00000017795", "database": "ENSEMBL", "url": "" } ] }, { "participant_id": "R-SSC-9770430", "participant_name": "YJU2 [nucleoplasm]", "crossref": [ { "id": "ENSSSCG00000013499", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000072636", "database": "ENSEMBL", "url": "" }, { "id": "95033", "database": "VGNC", "url": "" }, { "id": "ENSSSCP00000068755", "database": "ENSEMBL", "url": "" }, { "id": "A0A5G2QX80", "database": "UniProt", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGX0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 495, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGX0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGX0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" }, { "id": "PS50072", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50072" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPIase cyclophilin-type", "eco_id": "ECO_0000259", "start_pos": 6, "end_pos": 161, "start_aa": "Glu", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX0" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RRM", "eco_id": "ECO_0000259", "start_pos": 240, "end_pos": 318, "start_aa": "Asn", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 140, "end_pos": 142 }, { "start_pos": 157, "end_pos": 159 }, { "start_pos": 443, "end_pos": 445 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGX8-1", "uniprot_ac": "I3LGX8", "uniprot_id": "I3LGX8_PIG", "mass": { "chemical_mass": 101602.0, "monoisotopic_mass": 101602.0 }, "refseq": { "ac": "XP_003358779", "name": "chordin isoform X14", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358779" }, "gene_names": [ { "name": "CHRD", "type": "recommended", "evidence": [ { "id": "I3LGX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ] }, { "name": "CHRD", "type": "synonym", "evidence": [ { "id": "XP_003358779", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358779" } ] } ], "protein_names": [ { "name": "Chordin", "type": "recommended", "evidence": [ { "id": "I3LGX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX8/entry#names_and_taxonomy" } ] }, { "name": "chordin isoform X14", "type": "synonym", "evidence": [ { "id": "XP_003358779", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358779" } ] } ], "function": [ { "annotation": "Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes.", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8#function" }, { "database": "UniProtKB", "id": "PIRNR002496", "url": "https://www.uniprot.org/uniprotkb/PIRNR002496#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CHRD", "url": "https://www.uniprot.org/uniprotkb/I3LGX8", "locus": { "chromosome": "13", "start_pos": 122277645, "end_pos": 122266626, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025270", "url": "https://www.ensembl.org/id/ENSSSCG00000025270" } ] } } ], "crossref": [ { "id": "I3LGX8", "url": "https://alphafold.ebi.ac.uk/entry/I3LGX8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000025270", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025270", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100620350", "url": "https://www.ncbi.nlm.nih.gov/gene/100620350", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001007", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001007", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010895", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010895", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016353", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016353", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052278", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052278", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620350", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620350", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TGRFTFH", "url": "https://omabrowser.org/oma/group/TGRFTFH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46526", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46526", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46526:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46526:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00093", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00093", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07452", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07452", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003358779", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358779", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B4Z3", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B4Z3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B4Z3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGX8-1", "url": "https://www.uniprot.org/uniprotkb/I3LGX8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPSLLAPPAPLLLLGLLLLGSRLARGAGPESLALPIRPEKEPLPIRGAAGCSFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWGRRARGAARVSCKNIKPECPTLACGQPRQLPGHCCQTCPPERSGLEKQAPGLAFEYPRDPEHRSYSDRGEPGAEDRARGDGHTDFVALLTGPSSQAAARARVSLLRSNLRFSISYRRLDRPTRIRFSDSTGGILFEHPASPTQDGLVCGVWRAVPRSSLRLLRAEQLHVALVTPTHPSGEVWGPLIRHRALAAETFSAILTLEGPPQQGIGGIALLTLSDTEDSLHFLLLFRGLLESRSGGAAQVPLRLQILHQGKVLRELQANASAQELGFAEVLPNLTAQEMDWLVLGELQMALERASGPGLRISGHIAARQSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAVTLETKPQRRNQHTVLCHMAGFQPGGHTAVGVCPGLGARGAHMLLQNELFLNVATKDFPDGELRGHVAALPYSGHSARHDTLPVPLAGALVLPPVQSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTITAHLLGPPGMPGPRRLLKGFYGPEAQGVVKDLEPELLRHLAQGTASLLITTKGSPQGELRGQVHIANQCEVGGLRLAAAGTEEVQVPGAPDAMVAPAAVLPAVPGPDAPVPAKPGGPGRLRDPNSCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPGCPSPVQAPDQCCPVCPEKQDVRDLPGMPRNRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGSHPQLGDPMQADGPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSLPLSCGPGKESRCCSHCTPQRPAAETRTVPELEKDAEGS", "length": 957, "header": "tr|I3LGX8-1|I3LGX8_PIG Isoform 1 of Chordin OS=Sus scrofa OX=9823 GN=CHRD PE=3 SV=4 CANONICAL=I3LGX8-1" }, "isoforms": [ { "isoform_ac": "A0A287B4Z3-1", "url": "https://www.uniprot.org/uniprotkb/I3LGX8/entry#A0A287B4Z3-1", "sequence": { "sequence": "MPSLLAPPAPLLLLGLLLLGSRLARGAGPESLALPIRPEKEPLPIRGAAGCSFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWGRRARGAARVSCKNIKPECPTLACGQPRQLPGHCCQTCPPERSGLEKQAPGLAFEYPRDPEHRSYSDRGEPGAEDRARGDGHTDFVALLTGPSSQAAARARVSLLRSNLRFSISYRRLDRPTRIRFSDSTGGILFEHPASPTQDGLVCGVWRAVPRSSLRLLRAEQLHVALVTPTHPSGEVWGPLIRHRALAAETFSAILTLEGPPQQGIGGIALLTLSDTEDSLHFLLLFRGLLESRSGGAAQVPLRLQILHQGKVLRELQANASAQELGFAEVLPNLTAQEMDWLVLGELQMALERASGPGLRISGHIAARQSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQAVGVCPGLGARGAHMLLQNELFLNVATKDFPDGELRGHVAALPYSGHSARHDTLPVPLAGALVLPPVQSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTITAHLLGPPGMPGPRRLLKGFYGPEAQGVVKDLEPELLRHLAQGTASLLITTKGSPQGELRGQVHIANQCEVGGLRLAAAGTEEVQVPGAPDAMVAPAAVLPAVPGPDAPVPAKPGGPGRLRDPNSCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPGCPSPVQAPDQCCPVCPEKQDVRDLPGMPRNRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGSHPQLGDPMQADGPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSLPLSCGPGKESRCCSHCTPQRPAAETRTVPELEKDAEGS", "length": 917, "header": "tr|A0A287B4Z3-1|A0A287B4Z3_PIG Computationally mapped isoform of Chordin OS=Sus scrofa OX=9823 GN=CHRD PE=3 SV=2 CANONICAL=I3LGX8-1" }, "locus": { "chromosome": "13", "start_pos": 122277101, "end_pos": 122268685, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041472.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041472.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051552.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051552.2" } ] } }, { "isoform_ac": "I3LGX8-1", "url": "https://www.uniprot.org/uniprotkb/I3LGX8/entry#I3LGX8-1", "sequence": { "sequence": "MPSLLAPPAPLLLLGLLLLGSRLARGAGPESLALPIRPEKEPLPIRGAAGCSFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWGRRARGAARVSCKNIKPECPTLACGQPRQLPGHCCQTCPPERSGLEKQAPGLAFEYPRDPEHRSYSDRGEPGAEDRARGDGHTDFVALLTGPSSQAAARARVSLLRSNLRFSISYRRLDRPTRIRFSDSTGGILFEHPASPTQDGLVCGVWRAVPRSSLRLLRAEQLHVALVTPTHPSGEVWGPLIRHRALAAETFSAILTLEGPPQQGIGGIALLTLSDTEDSLHFLLLFRGLLESRSGGAAQVPLRLQILHQGKVLRELQANASAQELGFAEVLPNLTAQEMDWLVLGELQMALERASGPGLRISGHIAARQSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAVTLETKPQRRNQHTVLCHMAGFQPGGHTAVGVCPGLGARGAHMLLQNELFLNVATKDFPDGELRGHVAALPYSGHSARHDTLPVPLAGALVLPPVQSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTITAHLLGPPGMPGPRRLLKGFYGPEAQGVVKDLEPELLRHLAQGTASLLITTKGSPQGELRGQVHIANQCEVGGLRLAAAGTEEVQVPGAPDAMVAPAAVLPAVPGPDAPVPAKPGGPGRLRDPNSCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPGCPSPVQAPDQCCPVCPEKQDVRDLPGMPRNRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGSHPQLGDPMQADGPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSLPLSCGPGKESRCCSHCTPQRPAAETRTVPELEKDAEGS", "length": 957, "header": "tr|I3LGX8-1|I3LGX8_PIG Isoform 1 of Chordin OS=Sus scrofa OX=9823 GN=CHRD PE=3 SV=4 CANONICAL=I3LGX8-1" }, "locus": { "chromosome": "13", "start_pos": 122277101, "end_pos": 122268685, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022487.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022487.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023322.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023322.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620350", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620350", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MG93-1", "protein_name": "Chordin", "gene_name": "CHRD", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPSLPAPPAPLLLLGLLLLGSRPARGAGPEHPALPIRPEKEPLPIRGAAGCSFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWGRRARGAGRVSCKNIKPECPTLACGQPRQLPGHCCQTCPQEHSSPEKQPTGLAFEYPRDPEHRSYSDRGEPGAEDRGRGDGHTDFVALLTGPRSQAVARARVSLQRSSLRFSISYRRLDRPTRIRFSDSTGSILFEHPAAPTQDGLVCGVWRAVPRLSLRLLRAEQLYVALVTPTQPSGEVWGPLIRHRALAAETFSAILTLEGPPQPGIGGIALLTLSDTEDSLHFLLLFRGLLESRSGGPAQVPLRLQILHQGKLLRELQANASAQEPGFAEVLPNLTAQEMDWLVLGELQMALERASGPGLRISGHIAARQSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTGSEVVAMTLETKPQRRNQHTVLCHMVGLQPGGHRAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVAALPYSGHSARHDTLPVPLAGALVLPPVQSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTITAHLLGPPGMPGPRRLLKGFYGPEAQGVVKDLEPELLRHLAQGSASLLITTKGSPQGELRGQVHIANQCEVGGLRLAAAGDQEVQAPGALEAVAAMVAPLPAVPGPDTPVPARPGGPSRLRDPNTCFFEGQQRPHGARWAPNYDPLCSLCICQRRTVICDPVVCPPPSCPSPVQAPDQCCPVCPEKQDVKDLPGLPRNRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRANPTDCCKQCPVGSGGHPQLGDPMQADGPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSPPLSCGPGKESRCCSHCTPRRRPAPETRTVPELGKEDEGS", "length": 958 }, "evidence": [ { "id": "I3LGX8", "url": "https://omabrowser.org/oma/group/I3LGX8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O57472-1", "protein_name": "Chordin", "gene_name": "chd", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMEGLLWILLSVIIASVHGSRLKTPALPIQPEREPMISKGLSGCSFGGRFYSLEDTWHPDLGEPFGVMHCVMCHCEPQRSRRGKVFGKVSCRNMKQDCPDPTCDDPVLLPGHCCKTCPKGDSGRKEVESLFDFFQEKDDDLHKSYNDRSYISSEDTSTRDSTTTDFVALLTGVTDSWLPSSSGVARARFTLSRTSLTFSITFQRINRPSLIAFLDTDGNTAFEFRVPQADNDMICGIWKNVPKPHMRQLEAEQLHVSMTTADNRKEELQGRIIKHRALFAETFSAILTSDEVHSGMGGIAMLTLSDTENNLHFILIMQGLVPPGSSKVPVRVKLQYRQHLLREIRANITADDSDFAEVLADLNSRELFWLSRGQLQISVQTEGQTLRHISGFISGRRSCDTLQSVLSSGAALTAGQTGGVGSAVFTLHPNGSLDYQLLVAGLSSAVLSVSIEMKPRRRNKRSVLYELSAVFTDQRAAGSCGRVEARHTHMLLQNELFINIATALQPDGELRGQIRLLPYNGLDARRNELPVPLAGVLVSPPVRTGAAGHAWVSVDPQCHLHYEIIVNGLSKSEDASISAHLHGLAEIGEMDDSSTNHKRLLTGFYGQQAQGVLKDISVELLRHLNEGTAYLQVSTKMNPRGEIRGRIHVPNHCESPAPRAEFLEEPEFEDLLFTREPTELRKDTHTHVHSCFFEGEQHTHGSQWTPQYNTCFTCTCQKKTVICDPVMCPTLSCTHTVQPEDQCCPICEEKKESKETAAVEKVEENPEGCYFEGDQKMHAPGTTWHPFVPPFGYIKCAVCTCKGSTGEVHCEKVTCPPLTCSRPIRRNPSDCCKECPPEETPPLEDEEMMQADGTRLCKFGKNYYQNSEHWHPSVPLVGEMKCITCWCDHGVTKCQRKQCPLLSCRNPIRTEGKCCPECIEDFMEKEEMAKMAEKKKSWRH", "length": 940 }, "evidence": [ { "id": "I3LGX8", "url": "https://omabrowser.org/oma/group/I3LGX8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q24025-1", "protein_name": "Dorsal-ventral patterning protein Sog", "gene_name": "sog", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MANKLRKSNAIEWATATGTVPLLERSCCHSEDAALEPQASKTSHREQAPILRHLSQLSHLLIIAGLLIVCLAGVTEGRRHAPLMFEESDTGRRSNRPAVTECQFGKVLRELGSTWYADLGPPFGVMYCIKCECVAIPKKRRIVARVQCRNIKNECPPAKCDDPISLPGKCCKTCPGDRNDTDVALDVPVPNEEEERNMKHYAALLTGRTSYFLKGEEMKSMYTTYNPQNVVATARFLFHKKNLYYSFYTSSRIGRPRAIQFVDDAGVILEEHQLETTLAGTLSVYQNATGKICGVWRRVPRDYKRILRDDRLHVVLLWGNKQQAELALAGKVAKYTALQTELFSSLLEAPLPDGKTDPQLAGAGGTAIVSTSSGAASSMHLTLVFNGVFGAEEYADAALSVKIELAERKEVIFDEIPRVRKPSAEINVLELSSPISIQNLRLMSRGKLLLTVESKKYPHLRIQGHIVTRASCEIFQTLLAPHSAESSTKSSGLAWVYLNTDGSLAYNIETEHVNTRDRPNISLIEEQGKRKAKLEDLTPSFNFNQAIGSVEKLGPKVLESLYAGELGVNVATEHETSLIRGRLVPRPVADARDSAEPILLKRQEHTDAQNPHAVGMAWMSIDNECNLHYEVTLNGVPAQDLQLYLEEKPIEAIGAPVTRKLLEEFNGSYLEGFFLSMPSAELIKLEMSVCYLEVHSKHSKQLLLRGKLKSTKVPGHCFPVYTDNNVPVPGDHNDNHLVNGETKCFHSGRFYNESEQWRSAQDSCQMCACLRGQSSCEVIKCPALKCKSTEQLLQRDGECCPSCVPKKEAADYSAQSSPATNATDLLQQRRGCRLGEQFHPAGASWHPFLPPNGFDTCTTCSCDPLTLEIRCPRLVCPPLQCSEKLAYRPDKKACCKICPEGKQSSSNGHKTTPNNPNVLQDQAMQRSPSHSAEEVLANGGCKVVNKVYENGQEWHPILMSHGEQKCIKCRCKDSKVNCDRKRCSRSTCQQQTRVTSKRRLFEKPDAAAPAIDECCSTQCRRSRRHHKRQPHHQQRSSS", "length": 1038 }, "evidence": [ { "id": "I3LGX8", "url": "https://omabrowser.org/oma/group/I3LGX8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q63148-1", "protein_name": "Chordin", "gene_name": "Chrd", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPSLPAPPAPRLLLGLLLLGSRPAGGTGPEAPALPIRSEKEPLPVRGAAGCSFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWARRGRGPGRVSCKNIKPQCPTLACRQPRQLPGHCCQTCPQDAERSNLDPQPAGLVFEYPRDPEHRSYSDRGEPGTGERTRGDGHTEDFVALLTGPRTQAVARARVSLLRSSLRFSISYQRLDRPSRVRFTDPTGNILFEHPAAPTQDGLVCGVWRAVPRLSVRLLRAEQLRVALVTPTHPSEEVWGPLIWQGALTAETFSAILTLEDPLQRGVGGIALLTLSDTEDALHFLLLFRGLLGGLAHVPLKLQILHQGQLLRELQANASAQEPGFAEVLPSLTDQEMDWLVLGELQMVLEKMGGPELRISGYITTRQSCDVLQSVLCGADALIPVQTGAAGSASFILLGNGSLIYQVQVIGTGSEVVAMTLETKPQRKNQRTVLCHMAGLQLGGHMAVGVCSGLGARGAHMLLQNELFLNIGTKDFPDGELRGHVTALCYSGHSAHYDRLPVPLAGALVLPPVRSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTVTAHLLGPPGMPGPQRLLKGFYGSEAQGVVKDLEPVLLRHLTQGTASLLITTKSNPRGELRGQVHIASQCEVGGLRLASEGVRMSLAPNGEAATSPMLPAGPGPEAPVPAKHGSSGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQALDQCCPVCPEKQRSRDLPSLPNLEPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGATGEVHCEKVQCPRLACAQPVRANPTDCCKQCPVGSGTHAKLGDPMQADGPRGCRFAGQWFPENQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSPPLSCGSGKESRCCSHCTAQRSSETRTLPELEKEAQRS", "length": 951 }, "evidence": [ { "id": "I3LGX8", "url": "https://omabrowser.org/oma/group/I3LGX8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9H2X0-1", "protein_name": "Chordin", "gene_name": "CHRD", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPSLPAPPAPLLLLGLLLLGSRPARGAGPEPPVLPIRSEKEPLPVRGAAGCTFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWGRRTRGPGRVSCKNIKPECPTPACGQPRQLPGHCCQTCPQERSSSERQPSGLSFEYPRDPEHRSYSDRGEPGAEERARGDGHTDFVALLTGPRSQAVARARVSLLRSSLRFSISYRRLDRPTRIRFSDSNGSVLFEHPAAPTQDGLVCGVWRAVPRLSLRLLRAEQLHVALVTLTHPSGEVWGPLIRHRALAAETFSAILTLEGPPQQGVGGITLLTLSDTEDSLHFLLLFRGLLEPRSGGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALEWAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPGLPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGAHPQLGDPMQADGPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSLPLSCGSGKESRCCSRCTAHRRPAPETRTDPELEKEAEGS", "length": 955 }, "evidence": [ { "id": "I3LGX8", "url": "https://omabrowser.org/oma/group/I3LGX8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "spinal cord dorsal/ventral patterning", "id": "GO:0021513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0021513", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "positive regulation of cell adhesion", "id": "GO:0045785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045785", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "negative regulation of cell migration", "id": "GO:0030336", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030336", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "BMP signaling pathway", "id": "GO:0030509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030509", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "negative regulation of BMP signaling pathway", "id": "GO:0030514", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030514", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "dorsal/ventral pattern formation", "id": "GO:0009953", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009953", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "negative regulation of osteoblast differentiation", "id": "GO:0045668", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045668", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "positive regulation of mesenchymal cell proliferation", "id": "GO:0002053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002053", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "system development", "id": "GO:0048731", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048731", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "pattern specification process", "id": "GO:0007389", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007389", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "BMP binding", "id": "GO:0036122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036122", "evidence": [ { "database": "UniProtKB", "id": "I3LGX8", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 351, "end_pos": 353, "annotation": "n_glycosylation_sequon" }, { "start_pos": 365, "end_pos": 367, "annotation": "n_glycosylation_sequon" }, { "start_pos": 434, "end_pos": 436, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGX8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 957, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGX8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGX8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LGX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" }, { "id": "PS50933", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50933" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CHRD", "eco_id": "ECO_0000259", "start_pos": 168, "end_pos": 277, "start_aa": "Gly", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LGX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX8" }, { "id": "PS50184", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50184" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "VWFC", "eco_id": "ECO_0000259", "start_pos": 49, "end_pos": 126, "start_aa": "Ala", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 351, "end_pos": 353 }, { "start_pos": 365, "end_pos": 367 }, { "start_pos": 434, "end_pos": 436 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGX9-1", "uniprot_ac": "I3LGX9", "uniprot_id": "I3LGX9_PIG", "mass": { "chemical_mass": 85415.0, "monoisotopic_mass": 85415.0 }, "refseq": { "ac": "XP_003359697", "name": "chondroitin sulfate synthase 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359697" }, "gene_names": [ { "name": "CHPF", "type": "recommended", "evidence": [ { "id": "I3LGX9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ] }, { "name": "CHPF", "type": "synonym", "evidence": [ { "id": "XP_003359697", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359697" } ] } ], "protein_names": [ { "name": "Hexosyltransferase", "type": "recommended", "evidence": [ { "id": "I3LGX9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX9/entry#names_and_taxonomy" } ] }, { "name": "2.4.1.-", "type": "synonym", "evidence": [ { "id": "I3LGX9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGX9/entry#names_and_taxonomy" } ] }, { "name": "chondroitin sulfate synthase 2", "type": "synonym", "evidence": [ { "id": "XP_003359697", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359697" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CHPF", "url": "https://www.uniprot.org/uniprotkb/I3LGX9", "locus": { "chromosome": "15", "start_pos": 121544230, "end_pos": 121553288, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021610", "url": "https://www.ensembl.org/id/ENSSSCG00000021610" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021610", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021610", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100623047", "url": "https://www.ncbi.nlm.nih.gov/gene/100623047", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008428", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008428", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051227", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051227", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623047", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623047", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MEGKYCY", "url": "https://omabrowser.org/oma/group/MEGKYCY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LGX9", "url": "https://www.orthodb.org/?gene=I3LGX9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12369", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12369", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12369:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12369:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2022870", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022870", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003359697", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359697", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGX9-1", "url": "https://www.uniprot.org/uniprotkb/I3LGX9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGAEREKPGAGAGAVENWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQRLLVAVLTSQATLPTLGVAVNRTLGHRLERVVFLTGSRGRRAPPGMAVVTLGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDATYTEAHGLARLAGHLSLAAAAHLYLGRPQDFISGEPAPGRYCHGGFGVLLSRTLLQQLRPHLEACRNDIVSARPDEWLGRCILDATGVGCTGDHEGVHYSYLELSPGEPVQEGDPRFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEVQNTSRLAADGERAAAWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADQADVADVLGAALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRAAHADVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGRFDRQAATEACFYNSDYVAARARLAAASEQEEELLESLDVYELFLRFSSLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCRQSALESLGSRTQLAMLLFEQEQGNST", "length": 775, "header": "tr|I3LGX9-1|I3LGX9_PIG Isoform 1 of Hexosyltransferase OS=Sus scrofa OX=9823 GN=CHPF PE=3 SV=2 CANONICAL=I3LGX9-1" }, "isoforms": [ { "isoform_ac": "I3LGX9-1", "url": "https://www.uniprot.org/uniprotkb/I3LGX9/entry#I3LGX9-1", "sequence": { "sequence": "MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGAEREKPGAGAGAVENWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQRLLVAVLTSQATLPTLGVAVNRTLGHRLERVVFLTGSRGRRAPPGMAVVTLGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDATYTEAHGLARLAGHLSLAAAAHLYLGRPQDFISGEPAPGRYCHGGFGVLLSRTLLQQLRPHLEACRNDIVSARPDEWLGRCILDATGVGCTGDHEGVHYSYLELSPGEPVQEGDPRFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEVQNTSRLAADGERAAAWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADQADVADVLGAALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRAAHADVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGRFDRQAATEACFYNSDYVAARARLAAASEQEEELLESLDVYELFLRFSSLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCRQSALESLGSRTQLAMLLFEQEQGNST", "length": 775, "header": "tr|I3LGX9-1|I3LGX9_PIG Isoform 1 of Hexosyltransferase OS=Sus scrofa OX=9823 GN=CHPF PE=3 SV=2 CANONICAL=I3LGX9-1" }, "locus": { "chromosome": "15", "start_pos": 121553191, "end_pos": 121548132, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022258.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022258.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023323.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023323.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623047", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623047", "resource": "KEGG Pathway" }, { "id": "R-SSC-2022870", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022870", "resource": "Reactome", "description": "CS-GAG biosynthesis" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BMM8-1", "protein_name": "Hexosyltransferase", "gene_name": "CHPF", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGAERERPGAGAGAGENWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQKLLVAVLTSQATLPTLGVAVNRTLGHRLERVVFLTGSRGRRAPPGMAVVTLGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDATYTEAHGLARLVGRLSLAAAAHLYLGRPQDFIGGEPAPGRYCHGGFGVLLSRTLLQQLRPHLEACRNDIVSARPDEWLGRCILDATGVSCTGDHEGVHYSYLELSPGEPVQEGDPRFRSALTAHPVHDPVHMYQLHKAFARAELERTYQEIQELQWEIQNTSRLAADGERAAAWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADRADVADVLGAALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLAPAFLEAFATAALEPGDAAAALTLLLLYEPRQAQRAAHADVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGRFDRQAATETCFYNSDYVAARARLAASSDQEEELMESLDVYELFLRFSSLHVLRAVEPALLQHYRAQTCSARLSEDLYHRCRQSALESLGSRTQLAMLLFEQEQGNST", "length": 775 }, "evidence": [ { "id": "I3LGX9", "url": "https://omabrowser.org/oma/group/I3LGX9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1R7L6-1", "protein_name": "Hexosyltransferase", "gene_name": "chpfa", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRFSMLISLLRPIGPVIIGISLGFTLSLLSVSWVEESCDVNAVGDEGIALNQDGSLKGARRPNSISTGNDGEEEEKEDFPPRIIPYKPVKQTQPKKLFRAKYISTELGIRERLFVGIITSKNTINTLGVAVNRTIGHHLDNVVFFTGTRNRKIPHGMNVVTHGDERLIWNMFQTIKYILEHYITEYDWFYLAQDDTYTQADRIKALVGHLSMDRVLYMGSPEEFIGGEMQGRYCYGGFGYLLSRSLLLKLQPFLENCRNDILSARHDEWLGRCIIDYANTNCVEEFEGQRYYYYEMGKNSDPSKEDNVQFKNALTVHPVSDPEQMYRLHKHFTEIELRKTYEEIEKLQAEIRNVSVVAFEGNRSALWPVGINPPFEPKTRFEVLRWDYFTEDQVYSCIDGSPKCELRGVDKLDVADVIETAMGELNKKYKPVLYLKKQQLINGYRRFDPTRGMEYTLDLQLEVVNQKGHSRSITKRVHLVRPLSRIEIIPMPYVTEATRVHIILPVTLQDRDYVHQFLEVYATNAFETSENAILTFLFIYDPIEAQQVNQNDIFSSIKAQISTYEHRYPAVKIPWISVKSESPSQIKFMDIISKKHPVDTLFFIATVKTSISSEFLNRCRMNSINNWQVFFPIHFQYYNPDIAYHNQPLPSALDLVKEAGLFDRSSFTEACFYNSDYMATRTRMSSDVLENEEILENLDIYDMFVKYSGLHVFRAVEPALHQKYSYQTCNPRLSEEIYQRCVQSTLDSLGSRSQLAMLLFEQEQGNST", "length": 768 }, "evidence": [ { "id": "I3LGX9", "url": "https://omabrowser.org/oma/group/I3LGX9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5XIQ8-1", "protein_name": "Hexosyltransferase", "gene_name": "Chpf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGAERERPGADESWEPRVLPYHPAQPGQATKKAVRTRYISTELGIRQKLLVAVLTSQATLPTLGVAVNRTLGHRLEHVVFLTGARGRRTPSGMAVVALGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDATYTEAHGLDRLTGHLSLASATHLYLGRPQDFIGGETTPGRYCHGGFGVLLSRTLLQQLRPHLESCRNDIVSARPDEWLGRCILDATGIGCTGHHEGMHYNYLELSPGEPVQEGDPRFRSALTAHPVHDPVHMYQLHKAFARAELDRTYQEIQELQWEIQNTSRLAADGERASTWPVGIPAPSRPASRFEVLRWDYFTEQHTFSCADGSPRCLLRGADQADVADVLGTALEELNRRYQPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRWPLTHRVQLLRPLSRVEILPVPYVTEASRVTVLLPLAAAECDLASGFLEAFATAALEPGDAAALTLLLLYEPRQAQRAAHADVFAPVKAHVAELERRFPGARVPWLSVQTSAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGHFDRQAASEACFYNSDYVAARGRLVAVSEQEEELLESLDVYELFLRFSSLHVLRAVEPALLQRYRAQPCSARLSEDLYHRCRQSVLEGLGSRTQLAMLLFEQEQGNST", "length": 770 }, "evidence": [ { "id": "I3LGX9", "url": "https://omabrowser.org/oma/group/I3LGX9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6IQX7-1", "protein_name": "Chondroitin-polymerizing factor, non-catalytic subunit", "gene_name": "Chpf", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGSERERPGAGAGTGESWEPRVLPYHPAQPGQATKKAVRTRYISTELGIRQKLLVAVLTSQATLPTLGVAVNRTLGHRLEHVVFLTGARGRRTPSGMAVVALGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDATYTEAHGLDRLAGHLSLASATHLYLGRPQDFIGGDTTPGRYCHGGFGVLLSRTLLQQLRPHLESCRNDIVSARPDEWLGRCILDATGVGCTGDHEGMHYNYLELSPGEPVQEGDPRFRSALTAHPVRDPVHMYQLHKAFARAELDRTYQEIQELQWEIQNTSRLAADGERASAWPVGIPAPSRPASRFEVLRWDYFTEQYAFSCADGSPRCPLRGADQADVADVLGTALEELNRRYQPALQLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRWPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLASGFLEAFATAALEPGDAAALTLLLLYEPRQAQRAAHSDVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGHFDRQAASEACFYNSDYVAARGRLVAASEQEEELLESLDVYELFLRFSNLHVLRAVEPALLQRYRAQPCSARLSEDLYHRCRQSVLEGLGSRTQLAMLLFEQEQGNST", "length": 774 }, "evidence": [ { "id": "I3LGX9", "url": "https://omabrowser.org/oma/group/I3LGX9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZ52-1", "protein_name": "Chondroitin polymerizing factor, non-catalytic subunit", "gene_name": "CHPF", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGAEREKPGAGEGAGENWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQRLLVAVLTSQTTLPTLGVAVNRTLGHRLERVVFLTGARGRRAPPGMAVVTLGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDTTYTEAHGLARLTGHLSLASAAHLYLGRPQDFIGGEPTPGRYCHGGFGVLLSRMLLQQLRPHLEGCRNDIVSARPDEWLGRCILDATGVGCTGDHEGVHYSHLELSPGEPVQEGDPHFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEIQNTSHLAVDGDQAAAWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADRADVADVLGTALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRVAHADVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGRFDRQAASEACFYNSDYVAARGRLAAASEQEEELLESLDVYELFLHFSSLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCLQSVLEGLGSRTQLAMLLFEQEQGNST", "length": 775 }, "evidence": [ { "id": "I3LGX9", "url": "https://omabrowser.org/oma/group/I3LGX9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ], "pmid": "" }, { "name": "Golgi cisterna membrane", "id": "GO:0032580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032580", "evidence": [ { "database": "UniProtKB", "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "chondroitin sulfate proteoglycan biosynthetic process", "id": "GO:0050650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050650", "evidence": [ { "database": "UniProtKB", "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity", "id": "GO:0050510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050510", "evidence": [ { "database": "UniProtKB", "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ], "pmid": "" }, { "name": "glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity", "id": "GO:0047238", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047238", "evidence": [ { "database": "UniProtKB", "id": "I3LGX9", "url": "https://www.uniprot.org/uniprotkb/I3LGX9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 361, "end_pos": 363, "annotation": "n_glycosylation_sequon" }, { "start_pos": 773, "end_pos": 775, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-1971487", "name": "Chondroitin polymerase complex transfers GalNAc to CS chain", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1971487", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1971487" } ] }, { "id": "R-SSC-1971491", "name": "Chondroitin polymerase complex transfers GlcA to CS chain", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi lumen, Golgi membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1971491", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1971491" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 138, "end_pos": 140 }, { "start_pos": 361, "end_pos": 363 }, { "start_pos": 773, "end_pos": 775 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LH35-1", "uniprot_ac": "I3LH35", "uniprot_id": "I3LH35_PIG", "mass": { "chemical_mass": 37921.0, "monoisotopic_mass": 37921.0 }, "refseq": { "ac": "XP_013845690", "name": "speriolin-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845690" }, "gene_names": [ { "name": "SPATC1L", "type": "recommended", "evidence": [ { "id": "I3LH35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ] }, { "name": "SPATC1L", "type": "synonym", "evidence": [ { "id": "XP_013845690", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845690" } ] } ], "protein_names": [ { "name": "Spermatosis and centriole associated 1 like", "type": "synonym", "evidence": [ { "id": "I3LH35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH35/entry#names_and_taxonomy" } ] }, { "name": "speriolin-like protein", "type": "synonym", "evidence": [ { "id": "XP_013845690", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845690" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SPATC1L", "url": "https://www.uniprot.org/uniprotkb/I3LH35", "locus": {} } ], "crossref": [ { "id": "I3LH35", "url": "https://alphafold.ebi.ac.uk/entry/I3LH35", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000029847", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029847", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100625054", "url": "https://www.ncbi.nlm.nih.gov/gene/100625054", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026715", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026715", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029384", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029384", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029385", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029385", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625054", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625054", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PAYPEAC", "url": "https://omabrowser.org/oma/group/PAYPEAC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LH35", "url": "https://www.orthodb.org/?gene=I3LH35", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22192", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22192", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22192:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22192:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15058", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15058", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15059", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15059", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013845690", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013845690", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LH35-1", "url": "https://www.uniprot.org/uniprotkb/I3LH35-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEGSELMKRLMSENADLKKQVRLLKENQMLKRLLSESCQEPCGRGSRELLFPKAPAYPEACSPGSTGPDFGRFPGVPEAPSQLQASSLEDLLCSHGPLSGEDDASPGCAAAAAQAPFKAFLSAPELRAPRASDGKPSPLLSPLHDPLADKTLLEPREVGRPKKVCFSECSLPSGDRTRRSYYLNEIQSFTGTEKDGRIVGEIAFQLDRRILAYVFPGVTRLYGFTVSNIPEKIKQTSIKSLDGSVDEKKLRELTHRYLTLTARLERLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHGSPAALRKLVIDVVPPKFLGDSLLLLNCLCELSKEDGRPLFAW", "length": 344, "header": "tr|I3LH35-1|I3LH35_PIG Isoform 1 of Spermatosis and centriole associated 1 like OS=Sus scrofa OX=9823 GN=SPATC1L PE=4 SV=2 CANONICAL=I3LH35-1" }, "isoforms": [ { "isoform_ac": "I3LH35-1", "url": "https://www.uniprot.org/uniprotkb/I3LH35/entry#I3LH35-1", "sequence": { "sequence": "MAEGSELMKRLMSENADLKKQVRLLKENQMLKRLLSESCQEPCGRGSRELLFPKAPAYPEACSPGSTGPDFGRFPGVPEAPSQLQASSLEDLLCSHGPLSGEDDASPGCAAAAAQAPFKAFLSAPELRAPRASDGKPSPLLSPLHDPLADKTLLEPREVGRPKKVCFSECSLPSGDRTRRSYYLNEIQSFTGTEKDGRIVGEIAFQLDRRILAYVFPGVTRLYGFTVSNIPEKIKQTSIKSLDGSVDEKKLRELTHRYLTLTARLERLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHGSPAALRKLVIDVVPPKFLGDSLLLLNCLCELSKEDGRPLFAW", "length": 344, "header": "tr|I3LH35-1|I3LH35_PIG Isoform 1 of Spermatosis and centriole associated 1 like OS=Sus scrofa OX=9823 GN=SPATC1L PE=4 SV=2 CANONICAL=I3LH35-1" }, "locus": { "chromosome": "AEMK02000328.1", "start_pos": 577472, "end_pos": 559287, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031360.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031360.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023379.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023379.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625054", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625054", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3H8Y1-1", "protein_name": "Speriolin-like protein", "gene_name": "Spatc1l", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEGSELMNRLMSENADLKKQVRLLKENQMLKRLLSESCQENCGRGGRDLLFPKAPSYPEACSPGSGAPDFGRFASVPDTPSQLQISSLEDLLCSHAPLSSEDEASPGCASTSQVPFKAFLTPAELHARIADRKMSPLLSPLQDSLADKTLLEPRDIVRPKKVCFSESNLPTGDRSRRTYYLNEIQSFAGAEKDGRIVGEIAFQLDRRILAYVFPGVTRLYGFTVSNIPEKIKQTSIKSLDGSVDEKKLRELTHRYLTLTARLEKLGYSREVHPVFSEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDIVPPKFLGDSLLLLNCLCELSKEDSKPLFAW", "length": 342 }, "evidence": [ { "id": "I3LH35", "url": "https://omabrowser.org/oma/group/I3LH35/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P48450-1", "protein_name": "Lanosterol synthase", "gene_name": "Lss", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTEGTCLRRRGGPYKTEPATDLTRWRLHNELGRQRWTYYQAEEDPGREQTGLEAHSLGLDTTSYFKNLPKAQTAHEGALNGVTFYAKLQAEDGHWAGDYGGPLFLLPGLLITCHIAHIPLPAGYREEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYVSLRILGIGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVLNVYSWEGINTLFPEMWLLPEWFPAHPSTLWCHCRQVYLPMSYCYATRLSASEDPLVQSLRQELYVEDYASIDWPAQKNNVCPDDMYTPHSWLLHVVYGLLNLYERFHSTSLRKWAIQLLYEHVAADDRFTKCISIGPISKTVNMLIRWSVDGPSSPAFQEHVSRIKDYLWLGLDGMKMQGTNGSQTWDTSFAVQALLEAGAHRRPEFLPCLQKAHEFLRLSQVPDNNPDYQKYYRHMHKGGFPFSTLDCGWIVADCTAEALKAVLLLQERCPSITEHVPRERLYDAVAVLLSMRNSDGGFATYETKRGGYLLELLNPSEVFGDIMIDYTYVECTSAVMQALRHFREYFPDHRATESRETLNQGLDFCRKKQRADGSWEGSWGVCFTYGTWFGLEAFACMGHIYQNRTACAEVAQACHFLLSRQMADGGWGEDFESCEQRRYVQSAGSQVHSTCWALLGLMAVRHPDISAQERGIRCLLGKQLPNGDWPQENISGVFNKSCAISYTNYRNIFPIWALGRFSSLYPDNTLAGHI", "length": 733 }, "evidence": [ { "id": "I3LH35", "url": "https://omabrowser.org/oma/group/I3LH35/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9D9W0-1", "protein_name": "Speriolin-like protein", "gene_name": "Spatc1l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEGSELMSRLMSENADLKKQVRLLKENQMLKRLLSESCQESCGRGSRDLLYPKVPTYPEACSPGNGGPDFGRFAGVPDTPSQLPTSSLEDLLCSHAPLSSEDEASPGCATTSQMPFKSFLSPSELHSRIADRKLSPLLSPLQDSLADKTLLEPREISRPKKVCFSESNLPTGDRSRRTYYLNEIQSFSGAEKDGRIVGEIAFQLDRRILAYVFPGVTRLYGFTVSNIPEKIKQTSIKSLDGSVDEKKLRELTHRYLTLTARLEKLGYSREVHPVFSEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDIVPPKFLGDSLLLLNCLCELSKEDSKPLFAW", "length": 342 }, "evidence": [ { "id": "I3LH35", "url": "https://omabrowser.org/oma/group/I3LH35/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H0A9-1", "protein_name": "Speriolin-like protein", "gene_name": "SPATC1L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEGGELMSRLLSENADLKKQVRLLKENQMLRRLLSQSCQEGGGHDLLPPRAHAYPEAGSPGSGVPDFGRFTSVADTPSQLQTSSLEDLLCSHAPLSSEDDTSPGCAAPSQAPFKAFLSPPEPHSHRGTDRKLSPLLSPLQDSLVDKTLLEPREMVRPKKVCFSESSLPTGDRTRRSYYLNEIQSFAGAEKDARVVGEIAFQLDRRILAYVFPGVTRLYGFTVANIPEKIEQTSTKSLDGSVDERKLRELTQRYLALSARLEKLGYSRDVHPAFSEFLINTYGILKQRPDLRANPLHSSPAALRKLVIDVVPPKFLGDSLLLLNCLCELSKEDGKPLFAW", "length": 340 }, "evidence": [ { "id": "I3LH35", "url": "https://omabrowser.org/oma/group/I3LH35/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ], "pmid": "" }, { "name": "sperm head-tail coupling apparatus", "id": "GO:0120212", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120212", "evidence": [ { "database": "UniProtKB", "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein kinase A regulatory subunit binding", "id": "GO:0034237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034237", "evidence": [ { "database": "UniProtKB", "id": "I3LH35", "url": "https://www.uniprot.org/uniprotkb/I3LH35" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LH35-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 344, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LH35-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LH35" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LH35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH35" }, { "id": "PF15059", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15059" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Speriolin C-terminal", "eco_id": "ECO_0000259", "start_pos": 199, "end_pos": 344, "start_aa": "Ile", "end_aa": "Trp", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LH35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH35" }, { "id": "PF15058", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15058" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Speriolin N-terminal", "eco_id": "ECO_0000259", "start_pos": 3, "end_pos": 157, "start_aa": "Glu", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LH38-1", "uniprot_ac": "I3LH38", "uniprot_id": "I3LH38_PIG", "mass": { "chemical_mass": 49301.0, "monoisotopic_mass": 49301.0 }, "refseq": {}, "gene_names": [ { "name": "BYSL", "type": "recommended", "evidence": [ { "id": "I3LH38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ] } ], "protein_names": [ { "name": "Bystin like", "type": "synonym", "evidence": [ { "id": "I3LH38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH38/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BYSL", "url": "https://www.uniprot.org/uniprotkb/I3LH38", "locus": { "chromosome": "7", "start_pos": 37088533, "end_pos": 37074515, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026752", "url": "https://www.ensembl.org/id/ENSSSCG00000026752" } ] } } ], "crossref": [ { "id": "I3LH38", "url": "https://alphafold.ebi.ac.uk/entry/I3LH38", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026752", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026752", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR007955", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007955", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "TKLPVIW", "url": "https://omabrowser.org/oma/group/TKLPVIW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12821", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12821", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12821:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12821:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05291", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05291", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LH38-1", "url": "https://www.uniprot.org/uniprotkb/I3LH38-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPKLKAARGAEGQEKHAPLADQILAGNAVRAGTREKRRGRGTGEEEEEYVGPRLTRRILQQARQQQEELEAEHGTGDRPAAPQDRTTRLGPGAPQDGSDDEEWPTLAKAATMTGPGYQAEVVIDPEDERAIELFMNKNPPARRTLADIIMEKLTEKKTEVESVMSEVSGLPLPRLNPRLLEVYRGVREVLSKYRSGKLPTAFKMIPALSNWEEILYVTEPEAWSAAAMYQATRIFASNLKEHKAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILLPLCESGTCTLREAIILGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLRFRTEKRELPVLWHQCLLTLVQRYKADLATEQKEALLELLRVQSHPQLSPEIRRELQSAVPRDVEDVPVTME", "length": 435, "header": "tr|I3LH38-1|I3LH38_PIG Isoform 1 of Bystin like OS=Sus scrofa OX=9823 GN=BYSL PE=3 SV=2 CANONICAL=I3LH38-1" }, "isoforms": [ { "isoform_ac": "I3LH38-1", "url": "https://www.uniprot.org/uniprotkb/I3LH38/entry#I3LH38-1", "sequence": { "sequence": "MPKLKAARGAEGQEKHAPLADQILAGNAVRAGTREKRRGRGTGEEEEEYVGPRLTRRILQQARQQQEELEAEHGTGDRPAAPQDRTTRLGPGAPQDGSDDEEWPTLAKAATMTGPGYQAEVVIDPEDERAIELFMNKNPPARRTLADIIMEKLTEKKTEVESVMSEVSGLPLPRLNPRLLEVYRGVREVLSKYRSGKLPTAFKMIPALSNWEEILYVTEPEAWSAAAMYQATRIFASNLKEHKAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILLPLCESGTCTLREAIILGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLRFRTEKRELPVLWHQCLLTLVQRYKADLATEQKEALLELLRVQSHPQLSPEIRRELQSAVPRDVEDVPVTME", "length": 435, "header": "tr|I3LH38-1|I3LH38_PIG Isoform 1 of Bystin like OS=Sus scrofa OX=9823 GN=BYSL PE=3 SV=2 CANONICAL=I3LH38-1" }, "locus": { "chromosome": "7", "start_pos": 37086463, "end_pos": 37074542, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031143.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031143.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023383.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023383.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A650-1", "protein_name": "Bystin like", "gene_name": "BYSL", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPKAARGAEPLHEQILRAAAPRVRHRRGREEGDDAEERDGGYVGPRLARRILREARKQQEELEAEHGPGAPARPPQRCAAPGGPDSEEDEEDEEWPSLQRAAEWDGRCGGGDVEVDPEDEKALEVFMSRAPPLRRTLADVIMEKITEKQTEVQTALSELSGRPMPQLDPRVLEVYRGVREVLSKYRSGKLPKAFKIIPALSNWEQILYITEPETWTAAAMYQATRIFSSNLKERMAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIIGSILTKCSIPVLHSSAAMLKIAEMPYNGANSIFLRLLIDKKYALPFRVVDALVFHFLAFRTDQRTLPVLWHQSFLALCQRYKEDLSSEQKEALLELLKFHSHPQISAEIRRELANSKTRDVEGQEPAAME", "length": 428 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O54825-1", "protein_name": "Bystin", "gene_name": "Bysl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKFKVTRGASNREKHAPLAEQILAGNAVRAGTREKRRGREVEEEEEYVGPRLSRRILQQARQQQEELETDHGAGDRSAPPRERATRLGPGLPQDGSDEEDEEWPTLEKAAKMAGVDHQAEVIVDPEDERAIEMFMNKNPPVRRTLADIIMEKLTEKQTEVETVMSEVSGFPMPQLDPRVLEVYRGVREVLCKYRSGKLPKAFKVIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKERMAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLAFRTEKRQLPVLWHQCLLTLAQRYKADLATEQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDGGVTME", "length": 436 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P38333-1", "protein_name": "Essential nuclear protein 1", "gene_name": "ENP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARASSTKARKQRHDPLLKDLDAAQGTLKKINKKKLAQNDAANHDAANEEDGYIDSKASRKILQLAKEQQDEIEGEELAESERNKQFEARFTTMSYDDEDEDEDEDEEAFGEDISDFEPEGDYKEEEEIVEIDEEDAAMFEQYFKKSDDFNSLSGSYNLADKIMASIREKESQVEDMQDDEPLANEQNTSRGNISSGLKSGEGVALPEKVIKAYTTVGSILKTWTHGKLPKLFKVIPSLRNWQDVIYVTNPEEWSPHVVYEATKLFVSNLTAKESQKFINLILLERFRDNIETSEDHSLNYHIYRAVKKSLYKPSAFFKGFLFPLVETGCNVREATIAGSVLAKVSVPALHSSAALSYLLRLPFSPPTTVFIKILLDKKYALPYQTVDDCVYYFMRFRILDDGSNGEDATRVLPVIWHKAFLTFAQRYKNDITQDQRDFLLETVRQRGHKDIGPEIRRELLAGASREFVDPQEANDDLMIDVN", "length": 483 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P51406-1", "protein_name": "Bystin", "gene_name": "bys", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MGKPKKANVATIKNVNLEKQITEGRVAKNKNKDKVKLRAEESANIDARSSQKILAAAKLQQLELDEENFPSLVTVKKVNFSLNDGHVKEDEEVNETDLMADLDMDEDDVAAFERFQQPAQEGKRTLHLSKMIMQKIQEKEADIHTKISDEGSLKIEEIDPKVKEMYEGVRDVLKRYRSGKIPKAFKIIPKLRNWEQILFITEPHNWSAAAMFQGTRIFCSVLSQAMAQRFYNLVLLPRVRDDLCEYKKLNMHLYNALKRALFKPAAFMKGIILPLLEGGDCTLREAIIFGSVVARSSIPVLHSSACLLKICEMAYSGANSIFIRYFLDKRYALPYRVVDAAVFHFLRFENDKRELPVLWHQSLLTFAQRYKNDISSEQRDALLQLLKKKSHFKITPDVRRELQAASCRDVEMMETDNGLAGQPAKMYTDADVEYEG", "length": 436 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q13895-1", "protein_name": "Bystin", "gene_name": "BYSL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPKFKAARGVGGQEKHAPLADQILAGNAVRAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFPMPQLDPRVLEVYRGVREVLSKYRSGKLPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKERMAQRFYNLVLLPRVRDDVAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLGFRTEKRELPVLWHQCLLTLVQRYKADLATDQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDVPITVE", "length": 437 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54IS0-1", "protein_name": "Bystin", "gene_name": "bysl", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKDVKKVHKLRHDPLSKQIEESESAYQKPHKRVGKLRKKKAEMENDTGIDETESVIPSALSKKILDQIREQAIEVEVEDRKKEKQEKLLTFEQERIQSKLLSFNDFIDDDDDDEDADQDDNKRRSNGNDFDENDGFEQFSDTESQFGVGGEVEIDEEDERVLSMFMGGGGGDGQEQQFQTRFTLGDIIESKLKEHESRQVSSENAINPKVIDVYTKVGKLLETYTSGKIPRAFRILPNFTNWEDLLYLTRPDKWTPHSIRVATKLFCMSTNSKITQRFLSIVVLPRVRDNIAEYKKLNYHLYMALKKSLYRPAAFYKAILLPLAESGDCTLLEAKIIGSVVCKVSIPVLHSSVALMKLSQLTRYNGATSMFIRMLCDKKYALPYRVIDGLVDHFVMFDEEVRELPVLWHRALLSFVQRYKTDITKDQKEKLKIILRKHNHHIITAEIRRELFFSNSRGGVAPSNFTDDTSSMME", "length": 475 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5E9N0-1", "protein_name": "Bystin", "gene_name": "BYSL", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPKFKAARGAGVQEKHAPLAEQILAGDAVRAGTREKRRGRGTGDEEEEYVGPRLTRRILQQARQQQEELEAEHGSGDRPAVPRERTTRLGPGVPQDGSDDEEWPTLEQAAARAGPGYQAEVVVDPEDERAIEMFMNQNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFPVPQLDPRVLEVYRGVREVLSKYRSGKLPKAFKIIPALSNWEQILYITEPEAWTAAAMYQATRIFASNLKERMAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLGFRTEKRELPVLWHQCLLTLVQRYKADLATEQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDVPVTME", "length": 435 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q80WL2-1", "protein_name": "Bystin", "gene_name": "Bysl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKLKVTRGARNQERHAPLAEQILAGDAVRAGTREKRRRHGVEEEEEYVGPRLSRRILQQARQQQEELETEHATGDRPAKPRERATRLGPGVPQDGSDEEDEEWPTLEKAAKMTVVNHQAEVVVDPEDERAIEMFMNKNPPVRRTLADIIMEKLTEKQTEVETVMSEVSGFPMPQLDPRVLEVYRGVREVLCKYRSGILPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKERMAQRFYNLVLLPRVRDDIAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIISKCSIPVLHSSAAMLKIAEMEYSGASSIFLRLLLDKKYALPYRVLDALVFHFLAFRTEKRQLPVLWHQCLLTLAQRYKADLATEQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDVVVTME", "length": 436 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8RWS4-1", "protein_name": "Bystin", "gene_name": "ENP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAKKRDRIVNTQPFISDDASVASSRKRSKVPKTHQKQEKLIEAGMSEKIMKQALAQQKEVADEENAERNPSSAAFAVAGAATAGEEQKILEEEEDDIDDFDGTFENQSQFDKQEEINEDDEKLFESFLNKNAPPQRTLTDIIIKKLKDKDADLAEEERPDPKMDPAITKLYKGVGKFMSEYTVGKLPKAFKLVTSMEHWEDVLYLTEPEKWSPNALYQATRIFASNLKDRQVQRFYNYVLLPRVREDIRKHKKLHFALYQALKKSLYKPSAFNQGILFPLCKSGTCNLREAVIIGSILEKCSIPMLHSCVALNRLAEMDYCGTTSYFIKVLLEKKYCMPYRVLDALVAHFMRFVDDIRVMPVIWHQSLLTFVQRYKYEILKEDKEHLQTLLQRQKHHLVTPEILRELKDSRNRGEKEDPMVDNFAPVPAKEDRFDIPEVPMEED", "length": 444 }, "evidence": [ { "id": "I3LH38", "url": "https://omabrowser.org/oma/group/I3LH38/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" }, { "name": "apical part of cell", "id": "GO:0045177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045177", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" }, { "name": "preribosome, small subunit precursor", "id": "GO:0030688", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030688", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "snoRNA binding", "id": "GO:0030515", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030515", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "I3LH38", "url": "https://www.uniprot.org/uniprotkb/I3LH38" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LH38-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 435, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LH38-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LH38" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LH47-1", "uniprot_ac": "I3LH47", "uniprot_id": "I3LH47_PIG", "mass": { "chemical_mass": 55830.0, "monoisotopic_mass": 55830.0 }, "refseq": { "ac": "XP_003358428", "name": "ectonucleoside triphosphate diphosphohydrolase 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358428" }, "gene_names": [ { "name": "ENTPD3", "type": "recommended", "evidence": [ { "id": "I3LH47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ] }, { "name": "ENTPD3", "type": "synonym", "evidence": [ { "id": "XP_003358428", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358428" } ] } ], "protein_names": [ { "name": "apyrase", "type": "recommended", "evidence": [ { "id": "I3LH47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH47/entry#names_and_taxonomy" } ] }, { "name": "3.6.1.5", "type": "synonym", "evidence": [ { "id": "I3LH47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH47/entry#names_and_taxonomy" } ] }, { "name": "ectonucleoside triphosphate diphosphohydrolase 3", "type": "synonym", "evidence": [ { "id": "XP_003358428", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358428" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ENTPD3", "url": "https://www.uniprot.org/uniprotkb/I3LH47", "locus": { "chromosome": "13", "start_pos": 24659639, "end_pos": 24624417, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025783", "url": "https://www.ensembl.org/id/ENSSSCG00000025783" } ] } } ], "crossref": [ { "id": "I3LH47", "url": "https://alphafold.ebi.ac.uk/entry/I3LH47", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000025783", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025783", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd24112", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd24112", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623360", "url": "https://www.ncbi.nlm.nih.gov/gene/100623360", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000407", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000407", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623360", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623360", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GNAISDM", "url": "https://omabrowser.org/oma/group/GNAISDM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LH47", "url": "https://www.orthodb.org/?gene=I3LH47", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11782", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11782", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11782:SF38", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11782:SF38", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01150", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01150", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8850843", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8850843", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003358428", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003358428", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "13065", "url": "https://www.rhea-db.org/rhea/13065", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "20988", "url": "https://www.rhea-db.org/rhea/20988", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "23680", "url": "https://www.rhea-db.org/rhea/23680", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "36795", "url": "https://www.rhea-db.org/rhea/36795", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "36799", "url": "https://www.rhea-db.org/rhea/36799", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "64876", "url": "https://www.rhea-db.org/rhea/64876", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "64896", "url": "https://www.rhea-db.org/rhea/64896", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "64900", "url": "https://www.rhea-db.org/rhea/64900", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R8E3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8E3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8E3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8E3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LH47-1", "url": "https://www.uniprot.org/uniprotkb/I3LH47-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFTVLTRQPCEQAGFKALSRTSAIIALVVLLLSIAVLVAITLIQIHQREVLLPGLKYGIVLDAGSSRTTVYVYQWPAEKENNTGVVSQTFKCSVKGSGISSYAENPQDVPKAFEDCMQKVKGQIPAHLHGSTCIYLGATAGMRLLRLQNETAANEVLASIQNYFESQPFDFRGAQIISGQEEGIYGWITANYLMGNFLEKSLWHMWVHPNGVETTGALDLGGASTQISFAAEEKVGLNTSDIMKVSLYGYEYTLYTHSFQCYGRNEAEKRFLALLQESSTETTFTNPCYPRNYNTTFTSAHVFGSLCTVDLRPETYDPDNIITFEGTGDPSLCREKVASLFNFKACHDQEACSFNGVYQPKVKGSFVAFAGFYYTASAFNLSGSFSLHTFNSSMWNFCSQNWSQLPLLLPRFDEEYARSYCFSAHYIYHLLVNGYKFTEDTWPQIHFKKEVGNSSIAWSLGYMLSLTNQIPAESPLIRLPIKPSAFMGILASLQQWPCCV", "length": 500, "header": "tr|I3LH47-1|I3LH47_PIG Isoform 1 of apyrase OS=Sus scrofa OX=9823 GN=ENTPD3 PE=3 SV=2 CANONICAL=I3LH47-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R8E3-1", "url": "https://www.uniprot.org/uniprotkb/I3LH47/entry#A0A5G2R8E3-1", "sequence": { "sequence": "MFTVLTRQPCEQAGFKALSRTSAIIALVVLLLSIAVLVAITLIQIHQREVLLPGLKYGIVLDAGSSRTTVYVYQWPAEKENNTGVVSQTFKCSVKGSGISSYAENPQDVPKAFEDCMQKVKGQIPAHLHGSTCIYLGATAGMRLLRLQNETAANEVLASIQNYFESQPFDFRGAQIISGQEEGIYGWITANYLMGNFLEKSLWHMWVHPNGVETTGALDLGGASTQISFAAEEKVGLNTSDIMKVSLYGYEYTLYTHSFQCYGRNEAEKRFLALLQESSTETTFTNPCYPRNYNTTFTSAHVFGSLCTVDLRPETYDPDNIITFEGTGDPSLCREKVASLFNFKACHDQEACSFNGVYQPKVKGSFVAFAGFYYTASAFNLSGSFSLHTFNSSMWNFCSQNWSQLPLLLPRFDEEYARSYCFSAHYIYHLLVNGYKFTEDTWPQIHFKKEE", "length": 451, "header": "tr|A0A5G2R8E3-1|A0A5G2R8E3_PIG Computationally mapped isoform of apyrase OS=Sus scrofa OX=9823 GN=ENTPD3 PE=3 SV=1 CANONICAL=I3LH47-1" }, "locus": { "chromosome": "13", "start_pos": 24656296, "end_pos": 24625292, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084071.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084071.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073538.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073538.1" } ] } }, { "isoform_ac": "I3LH47-1", "url": "https://www.uniprot.org/uniprotkb/I3LH47/entry#I3LH47-1", "sequence": { "sequence": "MFTVLTRQPCEQAGFKALSRTSAIIALVVLLLSIAVLVAITLIQIHQREVLLPGLKYGIVLDAGSSRTTVYVYQWPAEKENNTGVVSQTFKCSVKGSGISSYAENPQDVPKAFEDCMQKVKGQIPAHLHGSTCIYLGATAGMRLLRLQNETAANEVLASIQNYFESQPFDFRGAQIISGQEEGIYGWITANYLMGNFLEKSLWHMWVHPNGVETTGALDLGGASTQISFAAEEKVGLNTSDIMKVSLYGYEYTLYTHSFQCYGRNEAEKRFLALLQESSTETTFTNPCYPRNYNTTFTSAHVFGSLCTVDLRPETYDPDNIITFEGTGDPSLCREKVASLFNFKACHDQEACSFNGVYQPKVKGSFVAFAGFYYTASAFNLSGSFSLHTFNSSMWNFCSQNWSQLPLLLPRFDEEYARSYCFSAHYIYHLLVNGYKFTEDTWPQIHFKKEVGNSSIAWSLGYMLSLTNQIPAESPLIRLPIKPSAFMGILASLQQWPCCV", "length": 500, "header": "tr|I3LH47-1|I3LH47_PIG Isoform 1 of apyrase OS=Sus scrofa OX=9823 GN=ENTPD3 PE=3 SV=2 CANONICAL=I3LH47-1" }, "locus": { "chromosome": "13", "start_pos": 24658018, "end_pos": 24625292, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028217.3", "url": "https://www.ensembl.org/id/ENSSSCT00000028217.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023392.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023392.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623360", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623360", "resource": "KEGG Pathway" }, { "id": "R-SSC-8850843", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8850843", "resource": "Reactome", "description": "Phosphate bond hydrolysis by NTPDase proteins" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K5S7-1", "protein_name": "apyrase", "gene_name": "Entpd3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RTTVLTSFTEIKEKIVSCFRALSRTPAIVTLVVLLVSIVVLVTLTLIQIHHPQVLSPGLKYGIVLDAGSSRTTVYVYQWPAEKENNTGVVSQTFRCSVKGSGISSYENNPQDAPKAFEDCMLKVKEQVPKHLHESTRVYLGATAGMRLLRLQNETAAHEVLESIQSYFKSQPFDFRGAQIISGQEEGVYGWITANYIMGNFLEKNLWHMWVHPHGVDTTGALDLGGASTQISFVSEEKMEPNASDTVQVSLYGYTYTLYTHSFQCYGRNEAEKKFLAMLLQSPSTDANISNPCYPHGYSTTFTMGHVFGSLCTEKQRPKSYNPSDTITFTGTGDPQLCREKVASVFDFSACQEQDACSFDGIYQPKVQGPFVAFAGFYYTASALNLSGSFSLTSFNDSSWDFCRHTWSELPSLLPRFDETYARSYCFSAHYIYHLLINGYKFTEATWPQIRFEKEVGNSSIAWSLGYMLSLTNQIPAGSPLIQLPIQPPVFMGVLAFFTAIALLCLAFLFYLCSAFRTKERSENAFDQAVDSD", "length": 533 }, "evidence": [ { "id": "I3LH47", "url": "https://omabrowser.org/oma/group/I3LH47/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q1MDD8-1", "protein_name": "apyrase", "gene_name": "ENTPD3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFTVLTRQPCEQAGLKVLSRTPAIIALVVLFLSIVVLMAITLIQTHQKEVLFPGPKYGIVLDAGSSRTTIYVYQWPAEKANNTGVVSQSFKCNVKGSGISNYAENPQDAPKAFEDCMQKVKGHIPVSLHGSTCVYLGATAGMRLLRLQNETAANEVLESIENYFKSQPFDFRDAQIISGQEEGIYGWITANYLMGNFLEKSLWHMWVHPSGKETTGALDLGGASTQISFAAEEKVGLNTSDIMKVTLYGYEYTLYTHSFQCYGRNEAEKRFLATLLQDYTTETTLTNPCYPQNYITTFTEAQVFGSLCTEDLRPERYNPNNTITFEGTGDPSLCREKVASLFNFSACHDHEACSFDGVYQPRVKGSFVAFAGFYYTANAFNLSGSFSLHAFNLSTWNFCSKNWNQLPLLLPQFDEQYARSYCFSAHYIYHLLVSGYKFTEESWPQIHFKKEVGNSSIAWSLGYMLSLTNQIPAESPLIRLPIKPSAFVGTLAFFAAVALLCLTYLVYLCVLSRNQRRSQHALDNMVDSE", "length": 529 }, "evidence": [ { "id": "I3LH47", "url": "https://omabrowser.org/oma/group/I3LH47/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8C2MBY6-1", "protein_name": "apyrase", "gene_name": "Entpd3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFTVMARQPCEQAGFRALSRTPGIVTLVVLLVSIVVLVTLTLIQIRHPQVLPPGLKYGIVLDAGSSRTTIYVYQWPAEKENNTGVVSQTFKCSVKGSGISSYENNPQDAPKAFEDCMVKVKEQIPEPLHGSTRVYLGATAGMRLLRLQNETAAQEVLESIQSYFKSQPFDFRGAQIISGQEEGVYGWITANYIMGNFLEKNLWHMWVHPHGVDTTGALDLGGASTQISFVSGEKMEPNASDTVQVSLYGYTYTLYTHSFQCYGRNEAEKKLLAMLLQSSPTGTNISNPCYPRGYSSTFNLGHIFGSLCTEKHRPDSYNPDDVVTFTGTGDPWLCREKVASVFDFKACQEQEACSFDGVYQPKVQGPFVAFAGFYYTASALNLSGSFSLASFNSSSWDFCKHTWMELPSLLPRFDEVYARSYCFSAHYIYHLLVNGYKFTEETWPQIRFEKEVGNSSIAWSLGYMLSLTNQIPAGSALIRLPIQPPVFMGVLAFFTAIALLCLAFLLYLCSAFRTKGRSENAFDQAVDSD", "length": 529 }, "evidence": [ { "id": "I3LH47", "url": "https://omabrowser.org/oma/group/I3LH47/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O75355-1", "protein_name": "Ectonucleoside triphosphate diphosphohydrolase 3", "gene_name": "ENTPD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFTVLTRQPCEQAGLKALYRTPTIIALVVLLVSIVVLVSITVIQIHKQEVLPPGLKYGIVLDAGSSRTTVYVYQWPAEKENNTGVVSQTFKCSVKGSGISSYGNNPQDVPRAFEECMQKVKGQVPSHLHGSTPIHLGATAGMRLLRLQNETAANEVLESIQSYFKSQPFDFRGAQIISGQEEGVYGWITANYLMGNFLEKNLWHMWVHPHGVETTGALDLGGASTQISFVAGEKMDLNTSDIMQVSLYGYVYTLYTHSFQCYGRNEAEKKFLAMLLQNSPTKNHLTNPCYPRDYSISFTMGHVFDSLCTVDQRPESYNPNDVITFEGTGDPSLCKEKVASIFDFKACHDQETCSFDGVYQPKIKGPFVAFAGFYYTASALNLSGSFSLDTFNSSTWNFCSQNWSQLPLLLPKFDEVYARSYCFSANYIYHLFVNGYKFTEETWPQIHFEKEVGNSSIAWSLGYMLSLTNQIPAESPLIRLPIEPPVFVGTLAFFTAAALLCLAFLAYLCSATRRKRHSEHAFDHAVDSD", "length": 529 }, "evidence": [ { "id": "I3LH47", "url": "https://omabrowser.org/oma/group/I3LH47/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BFW6-1", "protein_name": "Ectonucleoside triphosphate diphosphohydrolase 3", "gene_name": "Entpd3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFTVMTRQPCEQAGFRALSRTPAIVTLVVLLVSIVVLVTLTLIQIRHPQVLPPGLKYGVVLDAGSSRTTVYVYQWPAEKENNTGVVSQTFRCSVKGSGISSYENNPQDAPKAFEDCILKVKEQVPEHLHGSTRIYLGATAGMRLLRLQNETAAREVLESIQSYFKSQPFDFRGAQIISGQEEGVYGWITANYIMGNFLEKNLWHMWVHPHGVDTTGALDLGGASTQISFVAGEKMEPNASDTVQVSLYGYTYTLYTHSFQCYGQNEAEKKFLAMLLQSPSTEANISNPCYPQGYSTAFTLGHVFGSLCTEKQRPESYNSSKSVTFMGTGDPRLCREKVASVFDFNACQEQDACSFDGIYQPKVQGPFVAFAGFYYTASALNLSGSFSLTSFNDSSWDFCRHTWSELPALLSRFDETYARSYCFSAHYIYHLLVNGYKFTEETWPQIRFEKEVGNSSIAWSLGYMLSLTNQIPAGSPLIHLPIQPPVFMGVLAFFTAIALLCLAFLLYLCSSFRTKERSENAFDQAVDSD", "length": 529 }, "evidence": [ { "id": "I3LH47", "url": "https://omabrowser.org/oma/group/I3LH47/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "GDP phosphatase activity", "id": "GO:0004382", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004382", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "UDP phosphatase activity", "id": "GO:0045134", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045134", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "ribonucleoside triphosphate phosphatase activity", "id": "GO:0017111", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017111", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "apyrase activity", "id": "GO:0004050", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004050", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "nucleoside diphosphate phosphatase activity", "id": "GO:0017110", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017110", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "ribonucleoside triphosphate catabolic process", "id": "GO:0009203", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009203", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "ribonucleoside diphosphate catabolic process", "id": "GO:0009191", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009191", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" }, { "name": "nucleoside diphosphate catabolic process", "id": "GO:0009134", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009134", "evidence": [ { "database": "UniProtKB", "id": "I3LH47", "url": "https://www.uniprot.org/uniprotkb/I3LH47" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 149, "end_pos": 151, "annotation": "n_glycosylation_sequon" }, { "start_pos": 238, "end_pos": 240, "annotation": "n_glycosylation_sequon" }, { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" }, { "start_pos": 380, "end_pos": 382, "annotation": "n_glycosylation_sequon" }, { "start_pos": 391, "end_pos": 393, "annotation": "n_glycosylation_sequon" }, { "start_pos": 401, "end_pos": 403, "annotation": "n_glycosylation_sequon" }, { "start_pos": 453, "end_pos": 455, "annotation": "n_glycosylation_sequon" }, { "start_pos": 81, "end_pos": 83, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "13065", "name": "", "equation": "ATP + H2O = ADP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "13065", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/13065" } ] }, { "id": "20988", "name": "", "equation": "ATP + 2 H2O = AMP + 2 phosphate + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "20988", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/20988" } ] }, { "id": "23680", "name": "", "equation": "a ribonucleoside 5'-triphosphate + H2O = a ribonucleoside 5'-diphosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "23680", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/23680" } ] }, { "id": "36795", "name": "", "equation": "a ribonucleoside 5'-triphosphate + 2 H2O = a ribonucleoside 5'-phosphate + 2 phosphate + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36795", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36795" } ] }, { "id": "36799", "name": "", "equation": "a ribonucleoside 5'-diphosphate + H2O = a ribonucleoside 5'-phosphate + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36799", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36799" } ] }, { "id": "64876", "name": "", "equation": "UDP + H2O = UMP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "64876", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/64876" } ] }, { "id": "64896", "name": "", "equation": "UTP + 2 H2O = UMP + 2 phosphate + 2 H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "64896", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/64896" } ] }, { "id": "64900", "name": "", "equation": "UTP + H2O = UDP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "64900", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/64900" } ] }, { "id": "R-SSC-8851110", "name": "NTPDase3 hydrolyzes nucleoside triphosphates", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8851110", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8851110" } ] }, { "id": "R-SSC-8851129", "name": "NTPDase3 hydrolyzes nucleoside diphosphates", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-8851129", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8851129" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LH47-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 500, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LH47-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LH47" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 149, "end_pos": 151 }, { "start_pos": 238, "end_pos": 240 }, { "start_pos": 294, "end_pos": 296 }, { "start_pos": 380, "end_pos": 382 }, { "start_pos": 391, "end_pos": 393 }, { "start_pos": 401, "end_pos": 403 }, { "start_pos": 453, "end_pos": 455 }, { "start_pos": 81, "end_pos": 83 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": 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} ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LH57-1", "uniprot_ac": "I3LH57", "uniprot_id": "I3LH57_PIG", "mass": { "chemical_mass": 75618.0, "monoisotopic_mass": 75618.0 }, "refseq": { "ac": "XP_020943331", "name": "WD repeat-containing protein 43", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943331" }, "gene_names": [ { "name": "WDR43", "type": "recommended", "evidence": [ { "id": "I3LH57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ] }, { "name": "WDR43", "type": "synonym", "evidence": [ { "id": "XP_020943331", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943331" } ] } ], "protein_names": [ { "name": "WD repeat-containing protein 43", "type": "recommended", "evidence": [ { "id": "I3LH57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH57/entry#names_and_taxonomy" } ] }, { "name": "WD repeat-containing protein 43", "type": "synonym", "evidence": [ { "id": "XP_020943331", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943331" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "WDR43", "url": "https://www.uniprot.org/uniprotkb/I3LH57", "locus": { "chromosome": "3", "start_pos": 110318538, "end_pos": 110365062, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008534", "url": "https://www.ensembl.org/id/ENSSSCG00000008534" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008534", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008534", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519832", "url": "https://www.ncbi.nlm.nih.gov/gene/100519832", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007148", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007148", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052414", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052414", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519832", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519832", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PCTALTW", "url": "https://omabrowser.org/oma/group/PCTALTW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LH57", "url": "https://www.orthodb.org/?gene=I3LH57", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44267", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44267", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44267:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44267:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04003", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04003", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6791226", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6791226", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020943331", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943331", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LH57-1", "url": "https://www.uniprot.org/uniprotkb/I3LH57-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAGGGGVADPLSPAGVPCAFSPQNQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARSQAKEGPQRKKRKSEAVETSNQDDLLALGTAVGSVLLYSTVRGELHSKLINGGHDNKVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPIIAAGFCSDKMSLLLVYGNWFQPIIERVALNSKEPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQREDVENKRKSGKSEVSIEERLGALDIDPKKGKDSLPQTNSFPVLLTQGLESNDFEMLNKVLQTRNLNLIRRTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLVTQVTASEKTKGTACPPQKAKLVYEEESSEEESDDEIAEKDSDDNWDEDEEEKGSEKDEDVDEENEEEDEDAEEKDEENSEDRDVASEKELNGDSDLDPENESEEE", "length": 681, "header": "tr|I3LH57-1|I3LH57_PIG Isoform 1 of WD repeat-containing protein 43 OS=Sus scrofa OX=9823 GN=WDR43 PE=1 SV=3 CANONICAL=I3LH57-1" }, "isoforms": [ { "isoform_ac": "I3LH57-1", "url": "https://www.uniprot.org/uniprotkb/I3LH57/entry#I3LH57-1", "sequence": { "sequence": "MAAGGGGVADPLSPAGVPCAFSPQNQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARSQAKEGPQRKKRKSEAVETSNQDDLLALGTAVGSVLLYSTVRGELHSKLINGGHDNKVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPIIAAGFCSDKMSLLLVYGNWFQPIIERVALNSKEPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQREDVENKRKSGKSEVSIEERLGALDIDPKKGKDSLPQTNSFPVLLTQGLESNDFEMLNKVLQTRNLNLIRRTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLVTQVTASEKTKGTACPPQKAKLVYEEESSEEESDDEIAEKDSDDNWDEDEEEKGSEKDEDVDEENEEEDEDAEEKDEENSEDRDVASEKELNGDSDLDPENESEEE", "length": 681, "header": "tr|I3LH57-1|I3LH57_PIG Isoform 1 of WD repeat-containing protein 43 OS=Sus scrofa OX=9823 GN=WDR43 PE=1 SV=3 CANONICAL=I3LH57-1" }, "locus": { "chromosome": "3", "start_pos": 110365060, "end_pos": 110318979, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023075.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023075.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023402.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023402.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519832", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519832", "resource": "KEGG Pathway" }, { "id": "R-SSC-6791226", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6791226", "resource": "Reactome", "description": "Major pathway of rRNA processing in the nucleolus and cytosol" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z9V2-1", "protein_name": "WD repeat domain 43", "gene_name": "WDR43", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAAACGGEVAARPPLAFSPHDRRFLAVSGSDGRLRVWDTVGSRLQHEYVPSAHLSAACTCLAWAPPGGRPPPDKDGPQRKKRKSEAAEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRINCVRWHQDNCCLYSCSEDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWDLETKEVYRHFTGHATSVSSLMFTTVKPMNENKPFDGITGLYFLSGAIHDRLLSVWQIRSDRKEKNAVMSFTVTDEPTFIDLTVSELKEEPVKLAVVCKDGQLHLFEHILNGYCKKPLTSNCTIQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNTLQPIIEKVSLNTSESHICLIRDVQKALALKTDDAVTKVRTPVVNSDTKVLVPGIPGHSAAVKTPSSGKEKKKSKRKPGETEDSIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDEDILNKVLSTRKETLIKNTVARMPIHAVIPLLHELTKRLQGNPYSASQMVRWLKFVFTLHASYLSTLPDLIPQLGMLYQLMESRVKTLQKLSRLHGRLFLLVTQVAASETVQDVTEVNQTAKLVYEDESSEEEGSDDEMIADKDSDENWDEDEEKEEQSDEQDMTVEKEMNGDSDLEPENESEEE", "length": 661 }, "evidence": [ { "id": "I3LH57", "url": "https://omabrowser.org/oma/group/I3LH57/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A1Z7K2-1", "protein_name": "Small-subunit processome Utp12 domain-containing protein", "gene_name": "CG2396", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSLGKKHVLGFSPNGGQLFASVDESGVLRIWNTETNTLYQEFTPNLQLSGSCTALTWVLVAGSRPKKSRKSLQAQDAAGDQLHIALGTYKGSVVIYSLAEGKISRTLSGDSHDGPVTSITNDNAGHLYTVGADCRVVVWSLTDERSIAEWQVGPEKPQNIVYLQKSGTLAIGYRQLKVYDIKTKELVETFTGHSGEINTISSVASTDGTEFVLTTAKMERVICFWKIDKKGKNKASACTLLMEDLAYCLTSEVRDDGQLRVASVTRNGIIHIYLLNVNSLSAEKFVKPKVSLQIVSDGAETVEPLLAVAAHFVTDSNRSHEILFGYGSRQQLQFERFTPNYGEKLNVIVRADPKKLYAKKKGKEQPGYQAATKVQKPIVNQKNVEYNSALPISQKKVQNEVPMEARLEHLKIQGTKLSGGKLLTQSKTQLLMQALHSKDQAMIQAVLSTQDPETIQLTLDRLPLDYVNPLVNELSILLQGKHASVRSALRWLHALTSTHTSVLMSEDKEALREKLAVCLGVAEQRMHCLSEALQITGRVNLIINQMKRNADNHLNDNKALILDEDPDEPDPEAETNWSDLEEDQPGSPKSPLEDELVADDDLATDDGNADADTDSDVSMD", "length": 620 }, "evidence": [ { "id": "I3LH57", "url": "https://omabrowser.org/oma/group/I3LH57/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "F1MCK7-1", "protein_name": "WD repeat-containing protein 43", "gene_name": "WDR43", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAGGGGVADPLSPAGVPCAFSPQSQAYFALASADGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKEGPQRKKRKSEAIVTSNQADLLALGTAVGSILLYSTVKGELHSKLINGGHDNRVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLTFTTIRPPNEIQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGNWFQPTIERVALNPKEPHMCLIRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAVKPPPPQTKEVESKRKLGEKEVSIEERLGALDIASKKEKDNLPQTNSFPVLLTQGLESNDFEILNKVLQTRNLNLIKRTVLRMPLHAVIPLLQELTKRLQGHPNSAILMVQWLKCVLTVHASYLSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKETTCPAQKAKLVYEEESSEEESDDEIADKDSDDNWDEDEDEKASEKDEDVDEENEEEEGDDEDKDEENGEDRDVASEKELNGDSDLDPENESEEE", "length": 681 }, "evidence": [ { "id": "I3LH57", "url": "https://omabrowser.org/oma/group/I3LH57/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3V920-1", "protein_name": "WD repeat-containing protein 43", "gene_name": "Wdr43", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAGGGGSCDPLAPAGVPCAFSPDSQAYFALASSDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESHQRKKRKSEAIGTNDQADLLALGTAVGSILLYSTVKGELHSKLISGGHEKRVNCIQWHQDNDCLYSCSDDKYIVEWSTQMCRVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLRFTTIRPNESQPFDGVTGLYFLSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEHVLNGHCKKPLTSNCTIQVATPGKGKKATPKPIPILAAGFCLDKMSLLLVYGSWFQPTIERLALNSKDTHICLERDISNCWAPTVETAITKVKTPVMNSEAKVLVPGVPGHHAPIKLLPAQPKEAENKRKLGGKEATIEERLGAMDLDRRGKKDDLLQTNSFPVLLAQGLESNDFEMLNKVLQTRNVNLIKKTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTIHASYLSTLPDLVHQLGTLYQLMESRVKTFQKLSHLHGKLILLVTQVTASEKTKKMPSPGLKAKLVYEEESSEEESDDEIPEKDSDDNWDEDEEKDSENDEAVDEDSENDEAVDEEDEDREAASEKELNGDSDLDPENESEEE", "length": 674 }, "evidence": [ { "id": "I3LH57", "url": "https://omabrowser.org/oma/group/I3LH57/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q15061-1", "protein_name": "WD repeat-containing protein 43", "gene_name": "WDR43", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGSWFQPTIERVALNSREPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQTEQVESKRKSGGNEVSIEERLGAMDIDTHKKGKEDLQTNSFPVLLTQGLESNDFEMLNKVLQTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE", "length": 677 }, "evidence": [ { "id": "I3LH57", "url": "https://omabrowser.org/oma/group/I3LH57/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6ZQL4-1", "protein_name": "WD repeat-containing protein 43", "gene_name": "Wdr43", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAGGGGSYDPLAPAGVPCAFSPDSQAYFALASSDGQLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESHQRKKRKSEVTGTKDQADLLALGTAVGSILLYSTVRGELHSKLTSGGHENRVNCIQWHQDNDCLYSCSDDKYIVEWSTQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLRFTTIRPNESQPSDGITGLYFLSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYVDLTLSENKEEPVKLAVVCRDGQVHLFEHILNGHCKKPLTSNCTIQIATPGKGKKVTPKPIPILAASFCLDKMSLLLVYGNWFQPTIERVALNSKDTHICLERDISNCWAPTVETAITKVKTPVMNSEAKVLVPGIPGHHAPIKLPPAQPKEAENKRKLGSTEATIEERLGAMDLDRKGRKDDLQTNSFAVLLTQGLESNDFEILNKVLQTKNVNLIKRTVLRIPLRVVIPLLQELTKRLQGHPNSAALMIQWLKCVLTIHASYLSTLPDLVEQLGTLYQLMESRVKTFQKLSNLHGKLILLVTQVTASEKSKKMTSPGQKAKLVYEEESSEEESDDEVPEKDSDDNWDEDEDKDSEKDEGVDEDNEEEDEDMEDKEENEEDREVSSEKELNGDSDLDPENESEEE", "length": 677 }, "evidence": [ { "id": "I3LH57", "url": "https://omabrowser.org/oma/group/I3LH57/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T2Q3-1", "protein_name": "WD40 repeat-containing protein", "gene_name": "utp5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTSVTTYDKDRELFARVGKDNKIEVFNSFNCKLLHTFVEIEESKNQIILLTFSTHDKSEKKEYYKNLVAVSNSGKIYMYDCIDFKKKGIFDTHSKNITAVVLGKRYLFTSSHGGKVSQWDIKTKHIIRSFESSEKSISSMGLNNRESQLAIANNDITFIDLSNFKESKKVSTGSNSIKQIQFTQDDKFLICNRYQPTIQIYNIEKLTANNTNTTEPTFTLNATSPTKSISIFTHEIKRASKTVTQYLISSLLQNSQINIWAYYQDDQYNTDAETPITEITNKSNQIISMNFHSASELILAFFEKEKYQFERVKFFDKKSFIKSITVENPIEFDKTTTINNKKQKTSETISIQGNAAEMKQDKVNLPTIKKSTDSIASAGTIVDLIAQSLKSDNDNLLLSSIKVNFNVIQSTVKSLPSPYAYSLLSKLLKYLATDNSKSLIVLPWINCIIKDHSSYLLSVPNLSKKLSVLNTIIQDKFELHNRLSKLVGKFELISSQTKGDKTESIDYEPSLVYDEASDNEQQDADGDMVEEDDEDDESDEFDGMEGADDEDDEEIDDDIADLMDDDDDL", "length": 569 }, "evidence": [ { "id": "I3LH57", "url": "https://omabrowser.org/oma/group/I3LH57/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "positive regulation of rRNA processing", "id": "GO:2000234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000234", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "regulation of transcription elongation by RNA polymerase II", "id": "GO:0034243", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034243", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase I", "id": "GO:0045943", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045943", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "regulation of stem cell population maintenance", "id": "GO:2000036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000036", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000462", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000462", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "RNA polymerase II complex binding", "id": "GO:0000993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000993", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "transcription elongation factor activity", "id": "GO:0003711", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003711", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "fibrillar center", "id": "GO:0001650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001650", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" }, { "name": "small-subunit processome", "id": "GO:0032040", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032040", "evidence": [ { "database": "UniProtKB", "id": "I3LH57", "url": "https://www.uniprot.org/uniprotkb/I3LH57" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 314, "end_pos": 316, "annotation": "n_glycosylation_sequon" }, { "start_pos": 676, "end_pos": 678, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LH57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LH57" }, { "id": "PF04003", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Small-subunit processome Utp12", "eco_id": "ECO_0000259", "start_pos": 473, "end_pos": 575, "start_aa": "Asn", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 168, "end_pos": 170 }, { "start_pos": 223, "end_pos": 225 }, { "start_pos": 314, "end_pos": 316 }, { "start_pos": 676, "end_pos": 678 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { 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"https://www.genome.jp/dbget-bin/www_bget?ssc:110258046", "resource": "KEGG Pathway" }, { "id": "R-SSC-189085", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-189085", "resource": "Reactome", "description": "Digestion of dietary carbohydrate" } ], "orthologs": [ { "uniprot_canonical_ac": "P0DTE7-1", "protein_name": "Alpha-amylase 1B", "gene_name": "AMY1B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL", "length": 511 }, "evidence": [ { "id": "I3LHC3", "url": "https://omabrowser.org/oma/group/I3LHC3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DTE8-1", "protein_name": "Alpha-amylase 1C", "gene_name": "AMY1C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL", "length": 511 }, "evidence": [ { "id": "I3LHC3", "url": "https://omabrowser.org/oma/group/I3LHC3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUB6-1", "protein_name": "Alpha-amylase 1A", "gene_name": "AMY1A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL", "length": 511 }, "evidence": [ { "id": "I3LHC3", "url": "https://omabrowser.org/oma/group/I3LHC3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LHC3", "url": "https://www.uniprot.org/uniprotkb/I3LHC3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LHC3", "url": "https://www.uniprot.org/uniprotkb/I3LHC3" } ], "pmid": "" }, { "name": "alpha-amylase activity", "id": "GO:0004556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004556", "evidence": [ { "database": "UniProtKB", "id": "I3LHC3", "url": "https://www.uniprot.org/uniprotkb/I3LHC3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "I3LHC3", "url": "https://www.uniprot.org/uniprotkb/I3LHC3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 137, "end_pos": 139, "annotation": "n_glycosylation_sequon" }, { "start_pos": 331, "end_pos": 333, "annotation": "n_glycosylation_sequon" }, { "start_pos": 71, "end_pos": 73, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-188979", "name": "Digestion of linear starch (amylose) by extracellular amylase", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region", "input_participant_list": [ "R-ALL-189075" ], "output_participant_list": [ "R-ALL-188986" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-188979", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-188979" } ] }, { "id": "R-SSC-191114", "name": "Digestion of branched starch (amylopectin) by extracellular amylase", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region", "input_participant_list": [ "R-ALL-189071" ], "output_participant_list": [ "R-ALL-189108" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-191114", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-191114" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-188986", "participant_name": "Mal [extracellular region]", "crossref": [ { "id": "ZINC000004095490", "database": "ZINC", "url": "" }, { "id": "C00208", "database": "COMPOUND", "url": "" }, { "id": "17306", "database": "ChEBI", "url": "" }, { "id": "ZINC000004095762", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-189071", "participant_name": "starch (amylopectin) [extracellular region]", "crossref": [ { "id": "28057", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-189075", "participant_name": "starch (amylose) [extracellular region]", "crossref": [ { "id": "28102", "database": "ChEBI", "url": "" } ] }, { "participant_id": "R-ALL-189108", "participant_name": "limit dextrins [extracellular region]", "crossref": [ { "id": "28912", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LHC3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 415, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LHC3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LHC3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LHC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHC3" }, { "id": "SM00632", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00632" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Alpha-amylase C-terminal", "eco_id": "ECO_0000259", "start_pos": 326, "end_pos": 414, "start_aa": "Ala", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LHC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHC3" }, { "id": "SM00642", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00642" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glycosyl hydrolase family 13 catalytic", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 317, "start_aa": "Met", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 137, "end_pos": 139 }, { "start_pos": 331, "end_pos": 333 }, { "start_pos": 71, "end_pos": 73 } ] }, "class_list": [], "section_stats": [ { 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LHD9-1", "uniprot_ac": "I3LHD9", "uniprot_id": "I3LHD9_PIG", "mass": { "chemical_mass": 119282.0, "monoisotopic_mass": 119282.0 }, "refseq": {}, "gene_names": [ { "name": "HUNK", "type": "recommended", "evidence": [ { "id": "I3LHD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHD9" } ] } ], "protein_names": [ { "name": "Hormonally up-regulated neu tumor-associated kinase", "type": "recommended", "evidence": [ { "id": "I3LHD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHD9/entry#names_and_taxonomy" } ] }, { "name": "2.7.11.1", "type": "synonym", "evidence": [ { "id": "I3LHD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHD9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LHD9", "url": "https://www.uniprot.org/uniprotkb/I3LHD9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HUNK", "url": "https://www.uniprot.org/uniprotkb/I3LHD9", "locus": { "chromosome": "13", "start_pos": 195663902, "end_pos": 195528739, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029392", "url": "https://www.ensembl.org/id/ENSSSCG00000029392" } ] } } ], "crossref": [ { "id": "I3LHD9", "url": "https://alphafold.ebi.ac.uk/entry/I3LHD9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000029392", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029392", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd14070", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14070", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034671", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034671", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24346", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24346", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24346:SF80", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24346:SF80", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LHD9", "url": "https://www.uniprot.org/uniprotkb/I3LHD9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHD9-1", "url": "https://www.uniprot.org/uniprotkb/I3LHD9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSREGVNVQAEAANALVAVLLLLLLLLRLLLLQHSVPVWCEPGQTPRHLSILPSNHPSSSPSRLHRALLCARPGTGHRAPNPQSTQFESASLPSSCPRRVRLGGGGSLRGKVQKARAQNPGERRSWRRPDLGGPGARASEAARGPPVWRSGGSAAHSAAPAPRALPSPARVEFGCCARGGRGYEGFESAQAAEWSSHLFPPPATGLNFCKFKLNGAFFRCLPEGACSPPRAALGRERLPGAQLGASEPDPSPCGPTGGSGEGGGCQGARAPGPGIPAPGPGIGPRPPPPLPGPRAPCSPEPGDSHQPPGRDSGSRKGPGRPSEEELLGGGPRVPRGPGGRYCLRAALGGGRGRGSRGPGGAGPRAAAGGAGAAGPGGGGAASAGDEPKRRGPRASAMPAAAGDGLLGEPAAPGGGGGAEDAARPAAACEGSFLPAWVSGVPRERLRDFQHHKRVGNYLIGSRKLGEGSFAKVREGLHVLTGEKVAIKVIDKKRAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLEESEARRYIRQLISAVEHLHRAGVVHRDLKIENLLLDEDNNIKLIDFGLSNCAGILGHSDPFSTQCGSPAYAAPELLARKKYGPKIDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKEMNPLPTQLSTGAVNFLRSLLEPDPVKRPNIQQALANRWLNENYMGKVPCNVTYPNRISLEDLSPSVVLHMTEKLGYKNSDVINTVLSNRACHILAIYFLLNKKLERYLSGKSDIQDGVCYKTQLYQIERCRPTKEPYEASLDTWTRDLEFHAVQDKKPKEQEKRGDFLHRPFSKKLDKNLPSHKQPSASLITQIQNTRALLKDRKAAKPGFPDKDSFGCRNIFRKTSDSNCVASSSMEFIPVPPPRTPRVIKKPESPQQGPGSTSIPTKEDPLMLDMVRSFESVEREDQTELLSPSHHYRILNSPGVLARGNPGERTLSPVLLGSPSPLQTPLHSTLVSFAHEDKNSPPKEEGVCSPPPGSSNGGTMQPLGSPHCVKSRGRFPMMGIGQMLRKRHQSLQPPTDRPLEASMPPLQPTAPVSLSFDLADGVKGQC", "length": 1111, "header": "tr|I3LHD9-1|I3LHD9_PIG Isoform 1 of Hormonally up-regulated neu tumor-associated kinase OS=Sus scrofa OX=9823 GN=HUNK PE=3 SV=4 CANONICAL=I3LHD9-1" }, "isoforms": [ { "isoform_ac": "I3LHD9-1", "url": "https://www.uniprot.org/uniprotkb/I3LHD9/entry#I3LHD9-1", "sequence": { "sequence": 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"length": 1111, "header": "tr|I3LHD9-1|I3LHD9_PIG Isoform 1 of Hormonally up-regulated neu tumor-associated kinase OS=Sus scrofa OX=9823 GN=HUNK PE=3 SV=4 CANONICAL=I3LHD9-1" }, "locus": { "chromosome": "13", "start_pos": 195663899, "end_pos": 195528938, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026584.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026584.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023485.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023485.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 257, "start_aa": "Thr", "end_pos": 257, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr257", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LHD9", "url": "https://www.uniprot.org/uniprotkb/I3LHD9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "I3LHD9", "url": "https://www.uniprot.org/uniprotkb/I3LHD9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3LHD9", "url": "https://www.uniprot.org/uniprotkb/I3LHD9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LHD9", "url": "https://www.uniprot.org/uniprotkb/I3LHD9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "I3LHD9", "url": "https://www.uniprot.org/uniprotkb/I3LHD9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 519, "end_pos": 521, "annotation": "n_glycosylation_sequon" }, { "start_pos": 728, "end_pos": 730, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+)", 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Catalyzes the rate limiting step in the biosynthesis of heparan sulfate (HSact). This modification is a crucial step in the biosynthesis of anticoagulant heparan sulfate as it completes the structure of the antithrombin pentasaccharide binding site.", "evidence": [ { "database": "UniProtKB", "id": "I3LHH5", "url": "https://www.uniprot.org/uniprotkb/I3LHH5#function" }, { "database": "UniProtKB", "id": "ARBA00058845", "url": "https://www.uniprot.org/uniprotkb/ARBA00058845#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LHH5", "url": "https://www.uniprot.org/uniprotkb/I3LHH5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HS3ST1", "url": "https://www.uniprot.org/uniprotkb/I3LHH5", "locus": { "chromosome": "8", "start_pos": 7389780, "end_pos": 7423869, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": 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"I3LHH5-1", "url": "https://www.uniprot.org/uniprotkb/I3LHH5/entry#I3LHH5-1", "sequence": { "sequence": "MAALLLGAVMLVLQLQLVPCRPAMPGAGPSQQELVRKAATLQDEVRDSAAPNGSVQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSQGLDWYLSQMPFSYPHQLTVEKTPAYFTSPKVPERVHRMNPSIRLLLILRDPSERVLSDYTQVFYNHVQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRRIHIVDGDRLIRDPFPEIQKVERFLMLSPQINASNFYFNKTKGFYCLRDGGRDRCLHESKGRAHPQIDPKLLNKLHEYFHEPNKKFFELVGRTFDWH", "length": 311, "header": "tr|I3LHH5-1|I3LHH5_PIG Isoform 1 of Sulfotransferase OS=Sus scrofa OX=9823 GN=HS3ST1 PE=3 SV=2 CANONICAL=I3LHH5-1" }, "locus": { "chromosome": "8", "start_pos": 7391042, "end_pos": 7390110, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105560.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105560.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077308.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077308.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LHH5", "url": "https://www.uniprot.org/uniprotkb/I3LHH5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100628223", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628223", "resource": "KEGG Pathway" }, { "id": "R-SSC-2022928", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022928", "resource": "Reactome", "description": "HS-GAG biosynthesis" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C4I5-1", "protein_name": "Sulfotransferase", "gene_name": "HS3ST1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAFLLGAVLLIVQPQIVPSRPAINSKAETSAQSAQRELLKKTSQKNDFKENIHSNGSCRQLPQTIIIGVRKGGTRALLEMLSLHPDIAAAESEVHFFDWEDHYRNGLQWYINQMPFSYPHQITVEKTPAYFTSPEVPERVYNMNQSMRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEQFLIKDGELNVDYKAINRSLYYIHMQNWLKYFPLDHIHIVDGDKLIKDPFPEIEKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRERCLHESKGRAHPQVDTRLLEKLHEYFYEPNKKFFELVGRTFDWHSSVAS", "length": 320 }, "evidence": [ { "id": "I3LHH5", "url": "https://omabrowser.org/oma/group/I3LHH5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3IGP3-1", "protein_name": "Sulfotransferase", "gene_name": "Hs3st1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTLLLLGAVLLVARPQLVPSHPAVSGPGPRQQELLRKVGTLQEDTREGAAANGSTKQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSQGLGWYLTQMPFSSPNQLTVEKTPAYFTSPKVPERIYNMNPAIRLLLILRDPSERVLSDYTQVLYNHLQKRKPYPPIEDLLVRDGRLNMDYKALNRSLYHAHMLNWLRFFPLGHIHIVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYFHEPNKKFFELVGRTFDWH", "length": 311 }, "evidence": [ { "id": "I3LHH5", "url": "https://omabrowser.org/oma/group/I3LHH5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O14792-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "HS3ST1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAALLLGAVLLVAQPQLVPSRPAELGQQELLRKAGTLQDDVRDGVAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRAHPQVDPKLLNKLHEYFHEPNKKFFELVGRTFDWH", "length": 307 }, "evidence": [ { "id": "I3LHH5", "url": "https://omabrowser.org/oma/group/I3LHH5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O35310-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "Hs3st1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTLLLLGAVLLVAQPQLVHSHPAAPGPGLKQQELLRKVIILPEDTGEGTASNGSTQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSQGLGWYLTQMPFSSPHQLTVEKTPAYFTSPKVPERIHSMNPTIRLLLILRDPSERVLSDYTQVLYNHLQKHKPYPPIEDLLMRDGRLNLDYKALNRSLYHAHMLNWLRFFPLGHIHIVDGDRLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYFHEPNKKFFKLVGRTFDWH", "length": 311 }, "evidence": [ { "id": "I3LHH5", "url": "https://omabrowser.org/oma/group/I3LHH5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ESG5-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "Hs3st1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLLLLGAVLLVAQPQLVPSHPAAPGPGLKQQGLLRKVIILPEDTGEGAATNGSTQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSQGLGWYLTQMPFSSPHQLTVEKTPAYFTSPKVPERIHSMNPTIRLLLILRDPSERVLSDYTQVLYNHLQKHKPYPPIEDLLMRDGRLNVDYKALNRSLYHAHMLNWLRFFPLGHIHIVDGDRFIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYFREPNKKFFKLVGRTFDWH", "length": 311 }, "evidence": [ { "id": "I3LHH5", "url": "https://omabrowser.org/oma/group/I3LHH5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi lumen", "id": "GO:0005796", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005796", "evidence": [ { "database": "UniProtKB", "id": "I3LHH5", "url": "https://www.uniprot.org/uniprotkb/I3LHH5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "glycosaminoglycan biosynthetic process", "id": "GO:0006024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006024", "evidence": [ { "database": "UniProtKB", "id": "I3LHH5", "url": "https://www.uniprot.org/uniprotkb/I3LHH5" } ], "pmid": "" }, { "name": "heparan sulfate proteoglycan biosynthetic process", "id": "GO:0015012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015012", "evidence": [ { "database": "UniProtKB", "id": "I3LHH5", "url": "https://www.uniprot.org/uniprotkb/I3LHH5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "[heparan sulfate]-glucosamine 3-sulfotransferase activity", "id": "GO:0008467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008467", "evidence": [ { "database": "UniProtKB", "id": "I3LHH5", "url": "https://www.uniprot.org/uniprotkb/I3LHH5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 196, "end_pos": 198, "annotation": "n_glycosylation_sequon" }, { "start_pos": 246, "end_pos": 248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 253, "end_pos": 255, "annotation": "n_glycosylation_sequon" }, { "start_pos": 52, "end_pos": 54, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "15461", "name": "", "equation": "alpha-D-glucosaminyl-[heparan sulfate](n) + 3'-phosphoadenylyl sulfate = 3-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n) + adenosine 3',5'-bisphosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15461", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15461" } ] }, { "id": "R-SSC-2076383", "name": "HS3ST1 sulfates GlcN at C3 in heparan sulfate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "Golgi lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-2076383", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2076383" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LHH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHH5" }, { "id": "PF00685", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00685" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sulfotransferase", "eco_id": "ECO_0000259", "start_pos": 59, "end_pos": 298, "start_aa": "Pro", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 196, "end_pos": 198 }, { "start_pos": 246, "end_pos": 248 }, { "start_pos": 253, "end_pos": 255 }, { "start_pos": 52, "end_pos": 54 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LHI0-1", "uniprot_ac": "I3LHI0", "uniprot_id": "I3LHI0_PIG", "mass": { "chemical_mass": 46906.0, "monoisotopic_mass": 46906.0 }, "refseq": { "ac": "XP_003131507", "name": "keratin, type I cytoskeletal 23", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131507" }, "gene_names": [ { "name": "KRT23", "type": "recommended", "evidence": [ { "id": "I3LHI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHI0" } ] }, { "name": "KRT23", "type": "synonym", "evidence": [ { "id": "XP_003131507", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131507" } ] } ], "protein_names": [ { "name": "Keratin 23", "type": "synonym", "evidence": [ { "id": "I3LHI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHI0/entry#names_and_taxonomy" } ] }, { "name": "keratin, type I cytoskeletal 23", "type": "synonym", "evidence": [ { "id": "XP_003131507", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131507" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LHI0", "url": "https://www.uniprot.org/uniprotkb/I3LHI0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KRT23", "url": "https://www.uniprot.org/uniprotkb/I3LHI0", "locus": { "chromosome": "12", "start_pos": 21547062, "end_pos": 21528155, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024067", "url": "https://www.ensembl.org/id/ENSSSCG00000024067" } ] } } ], "crossref": [ { "id": "I3LHI0", "url": "https://alphafold.ebi.ac.uk/entry/I3LHI0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024067", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024067", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519795", "url": "https://www.ncbi.nlm.nih.gov/gene/100519795", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002957", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002957", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018039", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018039", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519795", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519795", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LHI0", "url": "https://www.orthodb.org/?gene=I3LHI0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23239", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23239", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23239:SF44", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23239:SF44", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00038", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00038", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6809371", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003131507", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003131507", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LHI0", "url": "https://www.uniprot.org/uniprotkb/I3LHI0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHI0-1", "url": "https://www.uniprot.org/uniprotkb/I3LHI0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSGYSFSQTLSGSLHGAAGGWGWPGSFPRAPSVHGGAGGVRISLSFSSPRSCPPPGGSWGSGRGSSLLGGNGKETMRNLNDRLASYLDKVRALEEANVKLESCILKWHEQRDSGSKQDYSQYEESISRLQEQIADGKMTNAQIILLIDNSRMAVDDFSLKYENEHSLKKDLEIEVEGLRKNLDDLTIITTDLEQEVEGMRKELILMKKHHEQAMEEHHMPNDFKVNVKVDATPGEDLIKVLEDMRQEYELLIKKKHQDFDVWYKEQSAAMAQEAASPATGQSGQSDIHELKRTFQALEIDLETQYNKKSALENMLSETQSRYSCQLQDMQEIISHHEEELGRLRHDLERQNNEYKVLLGIKSHLEKEIATYRQLLEGESRGSMEESKSSVKAPKIKAITRESVNGRIILSQVNEL", "length": 416, "header": "tr|I3LHI0-1|I3LHI0_PIG Isoform 1 of Keratin 23 OS=Sus scrofa OX=9823 GN=KRT23 PE=3 SV=2 CANONICAL=I3LHI0-1" }, "isoforms": [ { "isoform_ac": "I3LHI0-1", "url": "https://www.uniprot.org/uniprotkb/I3LHI0/entry#I3LHI0-1", "sequence": { "sequence": "MSSGYSFSQTLSGSLHGAAGGWGWPGSFPRAPSVHGGAGGVRISLSFSSPRSCPPPGGSWGSGRGSSLLGGNGKETMRNLNDRLASYLDKVRALEEANVKLESCILKWHEQRDSGSKQDYSQYEESISRLQEQIADGKMTNAQIILLIDNSRMAVDDFSLKYENEHSLKKDLEIEVEGLRKNLDDLTIITTDLEQEVEGMRKELILMKKHHEQAMEEHHMPNDFKVNVKVDATPGEDLIKVLEDMRQEYELLIKKKHQDFDVWYKEQSAAMAQEAASPATGQSGQSDIHELKRTFQALEIDLETQYNKKSALENMLSETQSRYSCQLQDMQEIISHHEEELGRLRHDLERQNNEYKVLLGIKSHLEKEIATYRQLLEGESRGSMEESKSSVKAPKIKAITRESVNGRIILSQVNEL", "length": 416, "header": "tr|I3LHI0-1|I3LHI0_PIG Isoform 1 of Keratin 23 OS=Sus scrofa OX=9823 GN=KRT23 PE=3 SV=2 CANONICAL=I3LHI0-1" }, "locus": { "chromosome": "12", "start_pos": 21546759, "end_pos": 21528216, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026513.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026513.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023526.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023526.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 233, "start_aa": "Thr", "end_pos": 233, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr233", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": 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Does not cleave terminal alpha 1,6-linked mannose on Man3GlcNAc2, and is also unable to hydrolyze terminal alpha 1,3-mannose linkages.", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6#function" }, { "database": "UniProtKB", "id": "ARBA00094269", "url": "https://www.uniprot.org/uniprotkb/ARBA00094269#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MAN2B2", "url": "https://www.uniprot.org/uniprotkb/I3LHM6", "locus": { "chromosome": "8", "start_pos": 4181195, "end_pos": 4137035, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027178", "url": "https://www.ensembl.org/id/ENSSSCG00000027178" } ] } } ], "crossref": [ { "id": "I3LHM6", "url": "https://alphafold.ebi.ac.uk/entry/I3LHM6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027178", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027178", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000602", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000602", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011013", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011013", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011330", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011330", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011682", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011682", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013780", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013780", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028995", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028995", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037094", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037094", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050843", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050843", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "LWMILGS", "url": "https://omabrowser.org/oma/group/LWMILGS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11607", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11607", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11607:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11607:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01074", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01074", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07748", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07748", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09261", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09261", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8853383", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8853383", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "84971", "url": "https://www.rhea-db.org/rhea/84971", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "84987", "url": "https://www.rhea-db.org/rhea/84987", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHM6-1", "url": "https://www.uniprot.org/uniprotkb/I3LHM6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "TSPSPRLLAAGMGPHSWLPLFMQLALLGPQWALHFYKVKVFVVPHSHMDVGWLHTVQESMQVYVPDVYNSVVEALTRGKRRRFIAVEQEYFRLWWDGFASAKRKQQVRQLLAEQRLEFVLGGQVMHDEAVTHFDDQILQLTEGHGFLYETFGIRPQFSWQVDPFGASATTPTLLALAGFNGHIISRIDYDLKDAMQHAQGLQFVWRGSRSLEARQEIFTHVLDQYSYCSDGFMWNGSPRFPDRPFDMDYSAVEMPVSQDSMNHYVLNLVDNVNKRAAWFRTQHVLWPWGCDRQFFNASQQFANMDRLMDHINKHTPELGISMQYATLAEYFQAVFAQDVSWQVRDHRDFLPYSSAPEQTWTGFYTSQSGLKRLARRASALLYAGESLFTRYMLSAARRFLDPAWALTQLQQLRWAVSEVQHHDGITGTHILAVRDMFVEHLTTGMAGVRKLMDSIAQDMPLTHSGPEPGGHVAMVYNPLAWTVTTVITLTVSFPEVSVTDESGRPVLAQVQDSKETPSAYDLHVLTTIPGLSYQHYIIRPIRKAREDSQEAAATVPSTIQFGLKLRRQDGQVGRNLVPVKNGCYTVFLDKDTNLMHSIWERQSNRTVRMSQEFLAYCSVYGYEEAVTSDNYLFTPNGTAEPAWAAVRMEVVEGQLLSEIRQYFYRQANDSDHTYAIYSRLAHGPQDSAGELLCHRIEQEYRVGPLELNHEVVLRTSTSLNTGLVLYSDNNGYQMQRRTYRHDRNNSVSLNYYPMAQSAFIQDGGSRLVLLSEQAHGVSSQGNGQVEVMLHRRLWNKLEWTLQYNLTHDVTSVVRPVLWLLLGPRTLTTGLRQRSGLELQHRPVVLFRELGGTVQNGPGPRKQEPVTLPPSLHLQILSIPGWKYSSNHTVHLKNLQKGHYRRAKADFRRVLLRLHHLYEAGEHQALSRPVTLNLQSVLRGLGSVVAVEERSLTGTWDVNSLHRWSWKTEDGHHHRGSSRRPLPPLRGPNVTIHPKEIRTFFIHFQEQ", "length": 1006, "header": "tr|I3LHM6-1|I3LHM6_PIG Isoform 1 of Alpha-mannosidase OS=Sus scrofa OX=9823 GN=MAN2B2 PE=3 SV=2 CANONICAL=I3LHM6-1" }, "isoforms": [ { "isoform_ac": "I3LHM6-1", "url": "https://www.uniprot.org/uniprotkb/I3LHM6/entry#I3LHM6-1", "sequence": { "sequence": "TSPSPRLLAAGMGPHSWLPLFMQLALLGPQWALHFYKVKVFVVPHSHMDVGWLHTVQESMQVYVPDVYNSVVEALTRGKRRRFIAVEQEYFRLWWDGFASAKRKQQVRQLLAEQRLEFVLGGQVMHDEAVTHFDDQILQLTEGHGFLYETFGIRPQFSWQVDPFGASATTPTLLALAGFNGHIISRIDYDLKDAMQHAQGLQFVWRGSRSLEARQEIFTHVLDQYSYCSDGFMWNGSPRFPDRPFDMDYSAVEMPVSQDSMNHYVLNLVDNVNKRAAWFRTQHVLWPWGCDRQFFNASQQFANMDRLMDHINKHTPELGISMQYATLAEYFQAVFAQDVSWQVRDHRDFLPYSSAPEQTWTGFYTSQSGLKRLARRASALLYAGESLFTRYMLSAARRFLDPAWALTQLQQLRWAVSEVQHHDGITGTHILAVRDMFVEHLTTGMAGVRKLMDSIAQDMPLTHSGPEPGGHVAMVYNPLAWTVTTVITLTVSFPEVSVTDESGRPVLAQVQDSKETPSAYDLHVLTTIPGLSYQHYIIRPIRKAREDSQEAAATVPSTIQFGLKLRRQDGQVGRNLVPVKNGCYTVFLDKDTNLMHSIWERQSNRTVRMSQEFLAYCSVYGYEEAVTSDNYLFTPNGTAEPAWAAVRMEVVEGQLLSEIRQYFYRQANDSDHTYAIYSRLAHGPQDSAGELLCHRIEQEYRVGPLELNHEVVLRTSTSLNTGLVLYSDNNGYQMQRRTYRHDRNNSVSLNYYPMAQSAFIQDGGSRLVLLSEQAHGVSSQGNGQVEVMLHRRLWNKLEWTLQYNLTHDVTSVVRPVLWLLLGPRTLTTGLRQRSGLELQHRPVVLFRELGGTVQNGPGPRKQEPVTLPPSLHLQILSIPGWKYSSNHTVHLKNLQKGHYRRAKADFRRVLLRLHHLYEAGEHQALSRPVTLNLQSVLRGLGSVVAVEERSLTGTWDVNSLHRWSWKTEDGHHHRGSSRRPLPPLRGPNVTIHPKEIRTFFIHFQEQ", "length": 1006, "header": "tr|I3LHM6-1|I3LHM6_PIG Isoform 1 of Alpha-mannosidase OS=Sus scrofa OX=9823 GN=MAN2B2 PE=3 SV=2 CANONICAL=I3LHM6-1" }, "locus": { "chromosome": "8", "start_pos": 4181054, "end_pos": 4137189, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023041.2", "url": "https://www.ensembl.org/id/ENSSSCT00000023041.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023573.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023573.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8853383", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8853383", "resource": "Reactome", "description": "Lysosomal oligosaccharide catabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M1PZ41-1", "protein_name": "Alpha-mannosidase", "gene_name": "man2b2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MIFPFFFGLLLMTVSENDAAEKIQAFVIPHSHMDVGWVYTVQESMHAYASNVYSTVVEELTRVKNRKFIAVEQEFFRLWWTNVASDWHKKQVRQLLLEGRLEFIIGGQVMHDEAVTDVDDAILQLTEGHGFLYETFGVRPRFAWHVDPFGASATTPVLFALAGFDAHLISRIDYDLKDDMQKNKKLQFVWRGSPTLKEKQEIFTHTMDQFSYCTPSYIPFSNRSGFYWNGVALFPDPPKDGKYPNMSLPVTKETVELYAQTMVDNIRLRAQWFRSSHVLWPWGCDKQFYNASVQFSNMDVLMNYINTHSDQYGVTVQYATLKDYFQTLHQTNLSWDVRGNQDFLPYSTEPFQAWTGFYGSRNVLKGVARRASSLLYASESLFTRYHISYPDGPVQREWALSKLKALRWAVSEVQHHDGITGTESPKVADMYMEHLLQGMMGAEELLAAIFLLPQTLSNDIYDQIKNTPTTARTDSENVPEQHIFVYNPLAWNISTYVNVSVQYAMAVVLDDDGKAVPAQIQPSMESSTVYDLFFVVELGGLQYRKYTVQFPQSPCDTGSACGATHVAKVVKFNKTNVRQWKKTGRKLLPVLNECYKLMFDQETNLLHSITDRSKKIRVRVQQDFWEYKANGDVQSGPISDNYIFTANGSAVPAYKSVVMEIVPGKVISEIRQYFYREEEDANHTYSVVTRVPVGFKGRLSCFRLEQSYKVGPLEVNRETVFRTRTSLQNNRTLFTDNNGYQMMKRTYKGYANNTVARNYYPMVRVAYMEDESSRVVFLSERAHGVASLSQGQLEVMLHRRLWNNQEWNQGYNLTLNDSSVVRPVLWMMLGSPDSLSSIYQQEAVELQHRPVVMAIDQPQKLLNQRETFSGPSVHPVVLPQNLHMQSLSIPGWNYSPEHSSGGDEKSEVNFDRILLRITHLYEEGESPVLSQPTTINLKEVMQGIGKVSKVQECSLTGTWNISDLQRWNWKTDETMQKTDKSGFSGVTQDFNVTISPKEIRTFFIYF", "length": 1006 }, "evidence": [ { "id": "I3LHM6", "url": "https://omabrowser.org/oma/group/I3LHM6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0Y9V3-1", "protein_name": "Alpha-mannosidase", "gene_name": "MAN2B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MNRSSGEECEEKRRGQRRERTDTRGLQRAGRKESVSKYPAFGTCVQPCERCPPQKHHRRKCGGTLIAVYAMWLPWLNTKMWLCSSQPAGPAHVICLSEVTVQRPTRATAHMEEANTLCMGNEESSMHAYAANVYTSVVEELMKGKQRKFIAVEQEFFRLWWDAVATDTHKQQVHQLLQEGRLEFVIGGQVMHDEAVTLIDDQILQLTEGHGFLYETFGIRPQFSWHVDPFGASATTPTLFALAGFNAHLISRIDYDLKADMQKNKKLQFVWQGSPSLSESQEIFTHTMDQYSYCTPSQLPFSNRSGFYWNGFAVFPDPPKDGVYPNMSLPVTDTNIHMYAQAMVANIKERAVWFRTNDVLWPWGCDKQFFNASVQYSNMDLLLDYINKHSDEFGVTVQYATVGDYFQAVYSRNLTWEIRTSQDFLPYSTEPFQAWTGFYTSRSMLKGVARRASSLLYAGESFFTQYVRTHPAGSICKHGALKQLQSLRWAVSEVQHHDGITGTESPKVTNMYMDNLMYGMFNVKKLMASIIFDMNNAKKSGEVYYIYNKDSGKPGTTDTDHYVIVYNPLAWNITTIVTVPVNISSMSVYDELGHSVPAQIQSSAESHSIYDLYILVEVSGLTYKKYNVKPSNDKQSAFIGRSIKYKRKDMMRSVQQSQKLLPVASNCYEIVFDQNTNLMHSITNRETNQTVQVTQEFLEYHVNGDVTKGPISDNYLFAPNSSAVPVSQAVGLEVVSGNLVTEIRQYFFSNVTAQYYTHAVFTRMYSVPEGYDAKLLCHRIEQEYSIGPLEVNREAVLRTSTNLNTGQLLYTDDNGFQIQKRPFKAYVNNTAARNYYPMVQTAYIEDDTTRLVLLAERAHGVSSQGNGQVEVMLHRRLWNNLQWDLNYNLTLNDSSVVRPVFWLILGTKSATSVLYRTSGLALQHRPVVMFGTFSGDKPELPGQLQKRSAHSFSVTVPPNLHLQTLSIPGWRYSSNHAEQVRAIHMGKQKQGDADFSRVLLRIRHLYEVGEDPVLSQPVMVNLKSLLKELGSVKLVEERSLTGTWDVNTLKRWKWKTVQNRSKGFSNSTKIPDDFTVTVHPKEIRTFFVYFQDQ", "length": 1093 }, "evidence": [ { "id": "I3LHM6", "url": "https://omabrowser.org/oma/group/I3LHM6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O54782-1", "protein_name": "Epididymis-specific alpha-mannosidase", "gene_name": "Man2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGPLRWLPLLGQLLLLWPRAAQPAGPIRAFVVPHSHMDVGWVFTVQESMRAYAANVYTTVVAELVRGGQRRFIAVEQEFFRLWWDGVASEQQKQQVRQLLHEGRLEFVLGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIRPQFSWHVDPFGASATTPTLFALAGFNAHLISRIDYDLKDAMQEAQMLQFVWHGSPSLSGQQEIFTHVMDHYSYCTPSHIPFSNRSGFYWNGVAVFPEPPPDGVYPNMSEPVTGANIHLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNASVQFDNMDPLLDYINQRTAQFGISVQYATLNDYFQALHATNMTWGIRDHQDFLPYSSEPLQAWTGFYTSRSTLKGLARQASALLYAGESMFTRYMWPDPSGTLDPTWALQQLQQLRWAVSEVQHHDAITGTESPKVKNMYTEHLRMGMLGVRKLMVSIALGGPPGSGTGAPKDIMGPQVTPVLSVDTRPVGYSASVYNPLAWKITTIITLTVAFPNVSVTDELGHPVSTQIQNSTKDPSAYDLLILTTIPGLNYRHYQVMHARGDQAGTRELVAPRANTLKFSLKLRNQPSQEGKRLVPVMNDCYILLFDQDTNMLHSIQDRQSNRTVRMTQEFLEYQANWDVKQGPISDNYLFAPNNTAEPSWEAVGMEMVAGTLVTDIRQYFYRYITDQEYIYSIHTRLAHPSLAGELLCQRIEQQYRVGPLDLNREAILRTSSDLNSQQVLYSDNNGYQMQRRPYKAFKSNPIPRNYYPMVQSAFIEDDKSRLVLLAERPHGVSSQGNGQVEVMLHRRLWNNLAWDLKYNLTLNDTSIVHPVLWLMLGPKSTMTALHPRSGVALQHGPVVLLKELADEETPVHGPHNPWPVTLPPNLHLQILSVPGWTYSRSHAQHLRNLQRGHPEKPQANLQRVLLRLRHLYEAGEDPVLSRPATVDLKVVLRGLGSVVAVEERSLTGTWDVQMLQRWHWSTKTDHLKGHPTSPPRPPGGSIITVYPKEIRTFFIKFQQ", "length": 1018 }, "evidence": [ { "id": "I3LHM6", "url": "https://omabrowser.org/oma/group/I3LHM6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y2E5-1", "protein_name": "Epididymis-specific alpha-mannosidase", "gene_name": "MAN2B2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQLCWLPLLAPLLLLRPPGVQSAGPIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTSVVEELARGQQRRFIAVEQEFFRLWWDGVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIRPQFSWHVDPFGASATTPTLFALAGFNAHLGSRIDYDLKAAMQEARGLQFVWRGSPSLSERQEIFTHIMDQYSYCTPSHIPFSNRSGFYWNGVAVFPKPPQDGVYPNMSEPVTPANINLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNASVQFANMDPLLDHINSHAAELGVSVQYATLGDYFRALHALNVTWRVRDHHDFLPYSTEPFQAWTGFYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPTWALQQLQQLRWAVSEVQHHDAITGTESPKVRDMYATHLASGMLGMRKLMASIVLDELQPQAPMAASSDAGPAGHFASVYNPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLLILTTIPGLSYRHYNIRPTAGAQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVPVANDCYIVLLDQDTNLMHSIWERQSNRTVRVTQEFLEYHVNGDVKQGPISDNYLFTPGKAAVPAWEAVEMEIVAGQLVTEIRQYFYRNMTAQNYTYAIRSRLTHVPQGHDGELLCHRIEQEYQAGPLELNREAVLRTSTNLNSQQVIYSDNNGYQMQRRPYVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRLWNNFDWDLGYNLTLNDTSVVHPVLWLLLGSWSLTTALRQRSALALQHRPVVLFGDLAGTAPKLPGPQQQEAVTLPPNLHLQILSIPGWRYSSNHTEHSQNLRKGHRGEAQADLRRVLLRLYHLYEVGEDPVLSQPVTVNLEAVLQALGSVVAVEERSLTGTWDLSMLHRWSWRTGPGRHRGDTTSPSRPPGGPIITVHPKEIRTFFIHFQQQ", "length": 1009 }, "evidence": [ { "id": "I3LHM6", "url": "https://omabrowser.org/oma/group/I3LHM6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "lysosomal lumen", "id": "GO:0043202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043202", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "alpha-mannosidase activity", "id": "GO:0004559", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004559", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "mannan endo-1,6-alpha-mannosidase activity", "id": "GO:0008496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008496", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "mannosyl-oligosaccharide 1,6-alpha-mannosidase activity", "id": "GO:0052767", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052767", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "mannose metabolic process", "id": "GO:0006013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006013", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "oligosaccharide catabolic process", "id": "GO:0009313", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009313", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" }, { "name": "glycoprotein catabolic process", "id": "GO:0006516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006516", "evidence": [ { "database": "UniProtKB", "id": "I3LHM6", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 235, "end_pos": 237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 296, "end_pos": 298, "annotation": "n_glycosylation_sequon" }, { "start_pos": 604, "end_pos": 606, "annotation": "n_glycosylation_sequon" }, { "start_pos": 636, "end_pos": 638, "annotation": "n_glycosylation_sequon" }, { "start_pos": 668, "end_pos": 670, "annotation": "n_glycosylation_sequon" }, { "start_pos": 744, "end_pos": 746, "annotation": "n_glycosylation_sequon" }, { "start_pos": 804, "end_pos": 806, "annotation": "n_glycosylation_sequon" }, { "start_pos": 886, "end_pos": 888, "annotation": "n_glycosylation_sequon" }, { "start_pos": 988, "end_pos": 990, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "84971", "name": "", "equation": "alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-D-GlcNAc + H2O = alpha-D-Man-(1->3)-beta-D-Man-(1->4)-D-GlcNAc + D-mannose", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "84971", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/84971" } ] }, { "id": "84987", "name": "", "equation": "alpha-D-Man-(1->6)-beta-D-Man-(1->4)-D-GlcNAc + H2O = 4-O-beta-D-mannopyranosyl-N-acetyl-D-glucosamine + D-mannose", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "84987", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/84987" } ] }, { "id": "R-SSC-6799581", "name": "MAN2B2 hydrolyses GlcNAc (Man)3 to GlcNAc:Man", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "lysosomal lumen", "input_participant_list": [ "R-ALL-6799577" ], "output_participant_list": [ "R-ALL-6799594" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6799581", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799581" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-6799577", "participant_name": "alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc [lysosomal lumen]", "crossref": [ { "id": "91279", "database": "ChEBI", "url": "" }, { "id": "G00027MO", "database": "GlyTouCan", "url": "" }, { "id": "ZINC000085427408", "database": "ZINC", "url": "" } ] }, { "participant_id": "R-ALL-6799594", "participant_name": "Man [lysosomal lumen]", "crossref": [ { "id": "C00159", "database": "COMPOUND", "url": "" }, { "id": "ZINC000003860903", "database": "ZINC", "url": "" }, { "id": "ZINC000003830679", "database": "ZINC", "url": "" }, { "id": "4650", "database": "Guide to Pharmacology - Ligands", "url": "" }, { "id": "4208", "database": "ChEBI", "url": "" }, { "id": "G70323CJ", "database": "GlyTouCan", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LHM6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1006, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LHM6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LHM6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LHM6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHM6" }, { "id": "SM00872", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00872" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glycoside hydrolase family 38 central", "eco_id": "ECO_0000259", "start_pos": 358, "end_pos": 441, "start_aa": "Gln", 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{ "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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Classification" ] }, { "id": "I3LHR3", "url": "https://www.orthodb.org/?gene=I3LHR3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45700", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45700", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45700:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45700:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00632", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00632", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003483576", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483576", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LHR3", "url": "https://www.uniprot.org/uniprotkb/I3LHR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHR3-1", "url": "https://www.uniprot.org/uniprotkb/I3LHR3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEADRVPSPAAPPAVVAAAPEEKKGKEPEREKLPPIVSAGAGAAAGLDRGSKGQISTFSSFISTVNQKKEATENRSSPTHLVFPNIKNVRDLPPICLDVRQKQRVSVDALSSEMKAPVLPEPVPPVQPKTMKDFQEDVEKSKSSGDWKTVHDFYLTTFDSFPELNAAFKKDASASFNTLEDSGINAKFVNAVYDALLNTPQDIQKTVLKGIINSLLREWKGPRTKDDLRAYFILLQNPQFNNTSTYVIYAHLLRQIATLVEADHHFLVHWFKKLSQKRFKQLVERLLQFISLRLFPAKPEEFPPISKCSWWIPSTSKVLALLNTANNLVHPPLIPYTDFYNSTLDHIDLMEEYHTWQSFGNSHRFSFCQYPFVISIAAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSYCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIVPSDQNTPVGICSVTTDDLCQIMPELAHGLSELLSYEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKIPVTNQNRKEYVHLYIDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE", "length": 776, "header": "tr|I3LHR3-1|I3LHR3_PIG Isoform 1 of Probable E3 ubiquitin-protein ligase HECTD2 OS=Sus scrofa OX=9823 GN=HECTD2 PE=4 SV=2 CANONICAL=I3LHR3-1" }, "isoforms": [ { "isoform_ac": "I3LHR3-1", "url": "https://www.uniprot.org/uniprotkb/I3LHR3/entry#I3LHR3-1", "sequence": { "sequence": "MSEADRVPSPAAPPAVVAAAPEEKKGKEPEREKLPPIVSAGAGAAAGLDRGSKGQISTFSSFISTVNQKKEATENRSSPTHLVFPNIKNVRDLPPICLDVRQKQRVSVDALSSEMKAPVLPEPVPPVQPKTMKDFQEDVEKSKSSGDWKTVHDFYLTTFDSFPELNAAFKKDASASFNTLEDSGINAKFVNAVYDALLNTPQDIQKTVLKGIINSLLREWKGPRTKDDLRAYFILLQNPQFNNTSTYVIYAHLLRQIATLVEADHHFLVHWFKKLSQKRFKQLVERLLQFISLRLFPAKPEEFPPISKCSWWIPSTSKVLALLNTANNLVHPPLIPYTDFYNSTLDHIDLMEEYHTWQSFGNSHRFSFCQYPFVISIAAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSYCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIVPSDQNTPVGICSVTTDDLCQIMPELAHGLSELLSYEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKIPVTNQNRKEYVHLYIDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE", "length": 776, "header": "tr|I3LHR3-1|I3LHR3_PIG Isoform 1 of Probable E3 ubiquitin-protein ligase HECTD2 OS=Sus scrofa OX=9823 GN=HECTD2 PE=4 SV=2 CANONICAL=I3LHR3-1" }, "locus": { "chromosome": "14", "start_pos": 103179791, "end_pos": 103095820, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031754.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031754.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023610.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023610.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LHR3", "url": "https://www.uniprot.org/uniprotkb/I3LHR3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156944", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156944", "resource": "KEGG Pathway" }, { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JYF3-1", "protein_name": "Probable E3 ubiquitin-protein ligase HECTD2", "gene_name": "Hectd2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAGCPHLPPRALSSAVLARDAGPRPEPRTTCGSRARPRARAGRAQGRRSLAAGPGRARWAAGTRADIRARGRAGGGGAAAAVGRSPLAAAAAAAPAPAAVRPPPPPPPPPPRASAARPDMSEAARDLSPGAPPAVAAAASEERKGKEPEREKLPPIVTAGAAAGLDRGSKGQISTFSSFVSSVTQKKEAAENRSSPTHLALPNIRNVRDLPPICLDVRQKQRMSMDSLSSEVKVPPLPEPILPSQPKTVKDFEEDLEKAEATGNWKTVHAFYITAFDSFTELNAAFKKDATASFNTIEDSGINANLVNAVFDALLNTPQDIQKSVLKGIINSLLQEWKGPRTKDDLRAYFILLQNPQFNITSTYVIYAHLLRQIATLVEADHHFLVHWLKKLSQKKFKQLVERLLQFVSLRLFPAKPEEFPPLTKCTWWIPSAAKVLALLNTANNLVHPPLVPYTDFYNSTLDHIDLMEEYHTWQSFGNSHRFSFCQYPFVISITAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQIMPELAHGLKELLSYEGNVEEDFYSTFQVFQEEFGVIKSYNLKPGGDKIPVTNQNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE", "length": 894 }, "evidence": [ { "id": "I3LHR3", "url": "https://omabrowser.org/oma/group/I3LHR3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZL18-1", "protein_name": "Probable E3 ubiquitin-protein ligase HECTD2", "gene_name": "HECTD2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSLQSPPAAAAGLSPGAELEQEQGSAAPPAAEEDGEDEEEEEEEGEKERDKLPPIPAACGAAAGGLERGAKNQFSTFSNFITTINQKKEGTGNRNSPTQLVIPSIKNVRDLPPICLDVRQKQRISIDTLPQELKAPVPPEPSLPIRTKTVKDFQDDMEKAKSSGDWKAVHDFYSTTFDSFLEINAAFKKDANSPFNTTEDSGINAKFVNVVYDALLNTPQDVQKSVLKGIINGLLQEWKGPRTKDDLRAYCILLQNPQFSNTSTYVIYAHLLRQIAALTEADHHFLVHWSKKISQRRFKQIVDRLLQFISLRLFPAKPEEFPPMVKCTWWIPSATKVLALFNAANSLISPPIISYTDFYNSTLDHIDLMEEYHNWQCYGNSHRFSFCQHPFIISIAAKKVIIQRDSEQQMISIARQSLVDKVSRRQKPDMNMLFLNVKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGALMGLAVYNSITLDIRFPPCCYKKLLSPPIVPCDHNTLVGICDVTLDDLFQIMPELAHGLSELLSYEGNVEEDFYSTFQVFQEEFGVIKSYNLKPNGDKIPVTNQNRKEYVQLYVDFLLNKSIYKQFAAFYYGFHSVCASYALLLLRPEEVEILVCGSPELDMSALQRSTQYEGYQKTDVTIRYFWDVVLGFSLDLQKKLLHFATGSDRVPVGGMADLNFKISKSEASTSWLPVAHTCFNQLCLPPYKNKKELKQKLIIGISNAEGFGLE", "length": 794 }, "evidence": [ { "id": "I3LHR3", "url": "https://omabrowser.org/oma/group/I3LHR3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1N7A0-1", "protein_name": "Probable E3 ubiquitin-protein ligase HECTD2", "gene_name": "HECTD2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSEADRVPSPAAPPAVAASAPEEKKGKEPEREKLPPIVSAGASAPAGLDRGFKGQISTFSSVISTVNQKKEAAENRSSPTHLVFPNIKNVRDLPPISLDVRQKQRISTDPLSSEMKAPVLPEPILPVQPKTMKDFLEDVEKAKSSGDWKTVYDFYLTTFDSFPELSAAFKKDASASNTIEDSGINAKFVNAVYDALLNTPQDIQKTVLKGIINSLLQEWKGPRTKDDLRAYFILLQNPQFNNTSTYVIYAHLLRQTASLVEADHHFLAHWFKKLSQKRFKPLVERLLQFISLRLFPAKPEEFPPISKCSWWIPSASKVLALLNTANNLVHPPLIPYTDFYNSTLDHIDLMEEYHTWQSFGNSHRFSFCQYPFVISIAAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSYCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIVPSDQNTPVGICSVTTDDLCQIMPELAHGLSELLSYEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKIPVTNQNRKEYVQLYIDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE", "length": 775 }, "evidence": [ { "id": "I3LHR3", "url": "https://omabrowser.org/oma/group/I3LHR3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5U5R9-1", "protein_name": "Probable E3 ubiquitin-protein ligase HECTD2", "gene_name": "HECTD2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSEAVRVPSPATPLVVAAPAPEERKGKESEREKLPPIVSAGAGATAGLDRGAKGQISTFSSFISAVSPKKEAAENRSSPAHLVFPNIKNVREPPPICLDVRQKQRTSMDASSSEMKAPVLPEPILPIQPKTVKDFQEDVEKVKSSGDWKAVHDFYLTTFDSFPELNAAFKKDATASFNTIEDSGINAKFVNAVYDTLLNTPQDVQKTVLKGIINSLLREWKGPRTKDDLRAYFILLQNPQFNNTSTYVIYAHLLRQIATLVEADHHFLVHWFKKLSQKRFKQLVERLLQFISLRLFPAKPEEFPPITKCSWWIPSAAKVLALLNTANNLVHPPLIPYTDFYNSTLDHIDLMEEYHTWQNFGNSHRFSFCQYPFVISVAAKKIIIQRDSEQQMINIARQSLVDKVSRRQRPDMNILFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE", "length": 776 }, "evidence": [ { "id": "I3LHR3", "url": "https://omabrowser.org/oma/group/I3LHR3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CDU6-1", "protein_name": "Probable E3 ubiquitin-protein ligase HECTD2", "gene_name": "Hectd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSEAARDLSPGAPPAVAAAAPEERKGKEPEREKLPPIVTAGAAAGLDRGSKGQISTFSSFVSTVTQKKEAAENRSSPTHLALPNIRNVRDLPPICLDVRQKQRMSVEALPSEVKVPPLPEPSLPSQPKTVKDFEEDLEKAEATGNWKTVHAFYITAFDSFTELNTAFKKDATASFNTIEDSGLNANLVNAVFDALLNTPQDIQKSVLKGIINSLLQEWKGPRTKDDLRAYFILLQNPQFNITSTYVIYAHLLRQIATLVEADHHFLVHWLKKLSQKKFKQLVERLLQFVSLRLFPAKPEEFPPLTKCTWWIPSAAKVLALLNTANNLVHPPLVPYTDFYNSTLDHIDLMEEYHTWQSFGNSHRFSFCQYPFVISIAAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSYEGNVEEDFYSTFQVFQEEFGVIKSYNLKPGGDKIPVTNQNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE", "length": 774 }, "evidence": [ { "id": "I3LHR3", "url": "https://omabrowser.org/oma/group/I3LHR3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "I3LHR3", "url": "https://www.uniprot.org/uniprotkb/I3LHR3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein polyubiquitination", "id": "GO:0000209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000209", "evidence": [ { "database": "UniProtKB", "id": "I3LHR3", "url": "https://www.uniprot.org/uniprotkb/I3LHR3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 242, "end_pos": 244, "annotation": "n_glycosylation_sequon" }, { "start_pos": 243, "end_pos": 245, "annotation": "n_glycosylation_sequon" }, { "start_pos": 342, "end_pos": 344, "annotation": "n_glycosylation_sequon" }, { "start_pos": 498, "end_pos": 500, "annotation": "n_glycosylation_sequon" }, { "start_pos": 626, "end_pos": 628, "annotation": "n_glycosylation_sequon" }, { "start_pos": 731, "end_pos": 733, "annotation": "n_glycosylation_sequon" }, { "start_pos": 75, "end_pos": 77, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-983140", "name": "Transfer of Ub from E2 to substrate and release of E2", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983140", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983140" } ] }, { "id": "R-SSC-983147", "name": "Release of E3 from polyubiquitinated substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983147", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983147" } ] }, { "id": "R-SSC-983156", "name": "Polyubiquitination of substrate", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983156", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983156" } ] }, { "id": "R-SSC-983157", "name": "Interaction of E3 with substrate and E2-Ub complex", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.
The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.
More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-983157", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983157" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LHR3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 776, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LHR3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LHR3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LHR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHR3" }, { "id": "PS50237", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50237" } ], "ann_type": "Domain_Extent_Annotation", 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35036.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Olfactory receptor", "type": "recommended", "evidence": [ { "id": "I3LHU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHU0/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3LHU0", "locus": {} } ], "crossref": [ { "id": "I3LHU0", "url": "https://alphafold.ebi.ac.uk/entry/I3LHU0", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd15225", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15225", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR26453", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26453", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHU0-1", "url": "https://www.uniprot.org/uniprotkb/I3LHU0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRDQISEGNFSSVMVFVLGFSELPNLQGLLFGLFFLVYIFILTGNGLIIIITRMDSVLQTPMYFFLANFSSLEICYVSVTLPRILMNLWTQERSISLLSYATQMCFFLVQGATEAFLLAVMAYDRYVSICNPLHYALCVQLAVAAWFSGIPVQIRQTCQVFSLPFCDSNQIRHFFCDIPPLIQQACWDTALNEICVYVVTVLFAMIPFLLILGSYVQIVSTILKMHSAEGRRKVFSTCGSHLTGVSIFHGTVLFMYVRPNSSYALDHDMIVSVFYTIVIPMLNPIIYSLRNKDVKEAVKRVFGKKIIC", "length": 309, "header": "tr|I3LHU0-1|I3LHU0_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN= PE=3 SV=4 CANONICAL=I3LHU0-1" }, "isoforms": [ { "isoform_ac": "I3LHU0-1", "url": "https://www.uniprot.org/uniprotkb/I3LHU0/entry#I3LHU0-1", "sequence": { "sequence": "MLRDQISEGNFSSVMVFVLGFSELPNLQGLLFGLFFLVYIFILTGNGLIIIITRMDSVLQTPMYFFLANFSSLEICYVSVTLPRILMNLWTQERSISLLSYATQMCFFLVQGATEAFLLAVMAYDRYVSICNPLHYALCVQLAVAAWFSGIPVQIRQTCQVFSLPFCDSNQIRHFFCDIPPLIQQACWDTALNEICVYVVTVLFAMIPFLLILGSYVQIVSTILKMHSAEGRRKVFSTCGSHLTGVSIFHGTVLFMYVRPNSSYALDHDMIVSVFYTIVIPMLNPIIYSLRNKDVKEAVKRVFGKKIIC", "length": 309, "header": "tr|I3LHU0-1|I3LHU0_PIG Isoform 1 of Olfactory receptor OS=Sus scrofa OX=9823 GN= PE=3 SV=4 CANONICAL=I3LHU0-1" }, "locus": { "chromosome": "AEMK02000449.1", "start_pos": 445429, "end_pos": 367585, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023552.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023552.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023637.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023637.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { "database": "UniProtKB", "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "detection of chemical stimulus involved in sensory perception of smell", "id": "GO:0050911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050911", "evidence": [ { "database": "UniProtKB", "id": "I3LHU0", "url": "https://www.uniprot.org/uniprotkb/I3LHU0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 10, "end_pos": 12, "annotation": "n_glycosylation_sequon" }, { "start_pos": 261, "end_pos": 263, "annotation": "n_glycosylation_sequon" }, { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LHU0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 309, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LHU0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LHU0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LHU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LHU0" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 45, "end_pos": 288, "start_aa": "Gly", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 10, "end_pos": 12 }, { "start_pos": 261, "end_pos": 263 }, { "start_pos": 69, "end_pos": 71 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"evidence": [ { "id": "I3LI05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI05" } ] } ], "protein_names": [ { "name": "Serrate RNA effector molecule homolog", "type": "recommended", "evidence": [ { "id": "I3LI05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI05/entry#names_and_taxonomy" } ] }, { "name": "Arsenite-resistance protein 2", "type": "synonym", "evidence": [ { "id": "I3LI05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI05/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Acts as a mediator between the cap-binding complex (CBC) and the primary microRNAs (miRNAs) processing machinery during cell proliferation. Contributes to the stability and delivery of capped primary miRNA transcripts to the primary miRNA processing complex containing DGCR8 and DROSHA, thereby playing a role in RNA-mediated gene silencing (RNAi) by miRNAs. Binds capped RNAs (m7GpppG-capped RNA); however interaction is probably mediated via its interaction with NCBP1/CBP80 component of the CBC complex. Involved in cell cycle progression at S phase. Does not directly confer arsenite resistance but rather modulates arsenic sensitivity. Independently of its activity on miRNAs, necessary and sufficient to promote neural stem cell self-renewal. Does so by directly binding SOX2 promoter and positively regulating its transcription.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QX23", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX23#function" }, { "database": "UniProtKB", "id": "ARBA00046030", "url": "https://www.uniprot.org/uniprotkb/ARBA00046030#function" }, { "database": "UniProtKB", "id": "I3LI05", "url": "https://www.uniprot.org/uniprotkb/I3LI05#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LI05", "url": "https://www.uniprot.org/uniprotkb/I3LI05" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SRRT", "url": "https://www.uniprot.org/uniprotkb/I3LI05", "locus": { "chromosome": "3", "start_pos": 8731201, "end_pos": 8717785, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024789", "url": "https://www.ensembl.org/id/ENSSSCG00000024789" } ] } } ], "crossref": [ { "id": "I3LI05", "url": "https://alphafold.ebi.ac.uk/entry/I3LI05", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024789", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024789", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR007042", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007042", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021933", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021933", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039727", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039727", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR13165", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13165", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13165:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13165:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04959", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04959", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12066", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12066", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6807505", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-72163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9770562", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770562", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9930044", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9930044", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QX23", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX23", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QX23-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QX23-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI05", "url": "https://www.uniprot.org/uniprotkb/I3LI05", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI05-1", "url": "https://www.uniprot.org/uniprotkb/I3LI05-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDVHIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMESGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGQGLGDGERKANDKDDKKEDGKQAENDSSSDDKTKKSEGDGDKEEKKEDAEKETKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEDAVKEKEKPKEEEREKPKDAPGLECKPRPHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASEPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF", "length": 875, "header": "tr|I3LI05-1|I3LI05_PIG Isoform 1 of Serrate RNA effector molecule homolog OS=Sus scrofa OX=9823 GN=SRRT PE=1 SV=3 CANONICAL=I3LI05-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QX23-1", "url": "https://www.uniprot.org/uniprotkb/I3LI05/entry#A0A5G2QX23-1", "sequence": { "sequence": "MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDVHIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMESGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRAGQGLGDGERKANDKDDKKEDGKQAENDSSSDDKTKKSEGDGDKEEKKEDAEKETKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEDAVKEKEKPKEEEREKPKDAPGLELNLCTKWVSVPLLFQLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASEPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRLLCHLLVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPVVPPPPAVIHVPVRVVLPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF", "length": 844, "header": "tr|A0A5G2QX23-1|A0A5G2QX23_PIG Computationally mapped isoform of Arsenite-resistance protein 2 OS=Sus scrofa OX=9823 GN=SRRT 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"R-SSC-2129379", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2129379", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013850150", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013850150", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QFE9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFE9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFE9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA65", "url": "https://www.uniprot.org/uniprotkb/F1SA65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA65-1", "url": "https://www.uniprot.org/uniprotkb/F1SA65-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI73", "url": "https://www.uniprot.org/uniprotkb/I3LI73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI73-1", "url": "https://www.uniprot.org/uniprotkb/I3LI73-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLEGLCLTRRGASTLTMARGPLARLLLACTALSCVAGVQGRWDGAVEAAGLGRVRRRGSPGFLQGPNVCGSRFHAYCCPGWRTLPGGNQCVVPICRHACGEGFCSRPNLCACADGKLAPSCGVSRGSGCSVSCMNGGSCRGESCLCQRGYTGTVCGQPVCDHGCYNGGRCIGPNHCACVYGFMGPQCERDYRTGPCFGQVVPEGCQNQLTGLVCTKALCCATVGRAWGFPCEFCPAQPHPCRRGFIPNIRTGACQDVDECQAVPGLCQGGSCVNTVGSFECRCPAGHRLNENSAKCEDVDECLSLPGLCSGGDCTNTVGSYVCTCPRGYASSLDGTRCLDHRAGTCFSALIVGRCARDLAGHYTHRQCCCDKGMCWAAGPVPELCPPRGSDEFQRLCAPGLPLLPSYPAPFPSLPGFGSSGRVGPGLGTARHSPHGSSGRGVPSLRFGDANIGTATLNQTIDICRHFTNLCLNGRCLPTSSSYRCECNVGYTQDMRGECIDMDECASSPCHHGDCVNTPGSYHCRCHEGFQATLTKQACVDVDECMVSSGLCHHGRCINTEGSFQCVCNAGFELSPDGKNCVDHNECATTTMCANGVCLNEDGSFACLCKPGFLLAPGGRHCMDIDECQTPGICMNGHCTNTEGSFHCRCLGGLMVGADGRVCVDTHVRSTCYGAFDKGFCARPFPGAVTKSECCCASLDHGFGEPCQLCPAKDSAEFQALCSSGLGITTDGRDINECALNPDICANGMCENLRGSYRCICNLGYEVGVAGKECQDVDECALNSLLCDNGRCWNSPGSYSCSCPQGFSFRQDTETCEDIDECLSNPCVNGVCRNLAGSYACECAPGSRLGPSGTVCLDSTKGTCWLKVQDGRCEANLPGATLRSECCATLGAAWGSPCERCDMDPACTRGFARMKGLTCEDVNECEVFPGVCTNGHCLNTAGSFRCQCPEGLTLDATGRLCVDVRLELCYLRWDEDECGAALPGKYRMDVCCCSVGAAWGATCEACPKPESAAFASLCPRGLGFASRDFLSGRPFYKDVNECKAFPGLCAQGTCRNTVGSFHCSCAGGFALDAQERNCTDIDECHISPDLCGQGTCVNTPGSFECECFHGYESGFMLMKNCMDVDECARDPLLCRGGTCTNTDGSYECHCPPGHALAMGTACEDIDECSLSDGLCPHGHCVNVIGAFQCSCHHGFQSTADLQGCVDTDECRAGNGGCQVHCVNTEGSYQCSCGQGYSLMPDGRACADVNECEENPDICDNGQCTNEPGGHRCLCYNGFVATLDMRTCVDVDECDLNPHICLHGDCENTRGSFVCHCQLGYVIRKGATGCSDLDECELGGHSCDSHASCLNIPGSFSCRCQPGWVGDGFECHDRDECAFQEHGCSPRADCLNIPGSYRCSCHPGFTGDGFSCEDRDECAENVDLCENGQCLNAPGGYRCECEMGFNPTEDQRACQDVDECVLGNLCVFGICENLPGMFRCVCDEGYELDRSGGNCTDVNECADPVNCINGLCVNTPGSYQCNCPQDFELNPSGVGCVDTRVGNCFLDTHDRGDGGISCSAEIGVGVTRASCCCSLGRAWGNPCELCPMANTTEYRTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGDCVNTFGSFQCQCPPGYHLNEDTRICEDIDECSAHSGICGPGTCYNTLGNYTCVCPAEYLQVNGGNNCMDMRKSVCFRQYNGTCGNELTFNVTQKLCCCSYNIGQAWNRPCEACPTPASLDYQILCGNQVPGFVIDIHTGKPLDIDECGEIPVICANGICINQIGSFRCECPSGFSHNSALLVCEDVDECASGESPCQQNANCINIPGSYRCKCARGYKLSPDGACVGRNECREIPNICSHGDCMDTVDSYTCQCHRGFRASADQTLCTDVDECDWQPCGNGTCKNVVGSYNCLCFSGFVAAHSGDCVDMDECTTMAGQVCRFGQCLNTAGSFHCLCQDGFELTNDGKNCMDTNECLSLSGTCLPGTCQNLEGSFRCICPPGFQVQSDHCVDIDECSEEPNLCLFGTCTNSPGSFQCLCPPGFVLSDNGHRCFDTRQSFCFTHFEAGKCSVPKAFNTTKTRCCCSQRPGEGWNDPCELCPQEGSAAFQELCPFGHGAVPGLDDSREDVNECAENPGVCSNGLCVNTDGSFRCECPFGYSLDFTGVSCMDTDECSIGHPCGEGTCTNVIGGFECACADGFEPGPMMTCEDIDECSLNPLLCAFRCHNTEGSYMCTCPTGYTLREDGAMCRDVDECADGQQDCHARGMLCKNLIGTFACVCPPGTRPQLGSGEGCTDDDECRAQPSLCANGRCINTQGSFQCDCDEGFQPSPSLTECHDTRQGPCFSEVLQAACQAPSSSGEVTTRAECCCGGGRAWGPRCELCPLPGTSAHRKLCPHGSGYTADGQDVDECHVFAHLCPHGECINSLGSFRCHCQAGYAPDTAATACLDVDECSQAPPPCPFLCKNTEGSFLCACPRGYRLEENGRICRDLDECSSRQHNCQFFCVNTIGAFTCRCPPGFTQHHQACFDNDECLAQPGPCGPRGRCHNSPGSFNCECYQGFTLDSSGRGCKDVDECDGPHRCQHGCQNELGGYRCGCPQGFTPHSQWSQCVDENECVLSPTACGSASCHNTLGGFRCVCPSGFNFDQALGGCQDVDECAGRGSPCSYSCANTPGGFLCGCPQGYFRAGQGHCVSGLGFHPGPQDTTEEEELLSPEACYECKINGQPPPDRPRRSAHRDHQVSLASLDLEAPLTLGLNLSHLGRAEHILELLPALESLGGRVRYVIARGNKQGFFRVHHLRGLSSLQLGRRRPGPGTYQLEVVSVAGPWGTQSEGWLGDPALRLKVQLQLL", "length": 2858, "header": "tr|I3LI73-1|I3LI73_PIG Isoform 1 of Fibrillin 3 OS=Sus scrofa OX=9823 GN=FBN3 PE=1 SV=2 CANONICAL=I3LI73-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFE9-1", "url": "https://www.uniprot.org/uniprotkb/I3LI73/entry#A0A5G2QFE9-1", "sequence": { "sequence": "MVLEGLCLTRRGASTLTMARGPLARLLLACTALSCVAGVQGRWDGAVEAAGLGRVRRRGSPGFLQGPNVCGSRFHAYCCPGWRTLPGGNQCVVPICRHACGEGFCSRPNLCACADGKLAPSCGVSRGSGCSVSCMNGGSCRGESCLCQRGYTGTVCGQPVCDHGCYNGGRCIGPNHCACVYGFMGPQCERDYRTGPCFGQVVPEGCQNQLTGLVCTKALCCATVGRAWGFPCEFCPAQPHPCRRGFIPNIRTGACQDVDECQAVPGLCQGGSCVNTVGSFECRCPAGHRLNENSAKCEDVDECLSLPGLCSGGDCTNTVGSYVCTCPRGYASSLDGTRCLDHRAGTCFSALIVGRCARDLAGHYTHRQCCCDKGMCWAAGPVPELCPPRGSDEFQRLCAPGLPLLPSYPAPFPSLPGFGSSGRVGPGLGTARHSPHGSSGRGVPSLRFGDANIGTATLNQTIDICRHFTNLCLNGRCLPTSSSYRCECNVGYTQDMRGECIDMDECASSPCHHGDCVNTPGSYHCRCHEGFQATLTKQACVDVDECMVSSGLCHHGRCINTEGSFQCVCNAGFELSPDGKNCVDHNECATTTMCANGVCLNEDGSFACLCKPGFLLAPGGRHCMDIDECQTPGICMNGHCTNTEGSFHCRCLGGLMVGADGRVCVDTHVRSTCYGAFDKGFCARPFPGAVTKSECCCASLDHGFGEPCQLCPAKDSAEFQALCSSGLGITTDGRDINECALNPDICANGMCENLRGSYRCICNLGYEVGVAGKECQDVDECALNSLLCDNGRCWNSPGSYSCSCPQGFSFRQDTETCEDIDECLSNPCVNGVCRNLAGSYACECAPGSRLGPSGTVCLDSTKGTCWLKVQDGRCEANLPGATLRSECCATLGAAWGSPCERCDMAPGSLQPWSLFLVYHCPDVNECEVFPGVCTNGHCLNTAGSFRCQCPEGLTLDATGRLCVDVRLELCYLRWDEDECGAALPGKYRMDVCCCSVGAAWGATCEACPKPESAAFASLCPRGLGFASRDFLSGRPFYKDVNECKAFPGLCAQGTCRNTVGSFHCSCAGGFALDAQERNCTDIDECHISPDLCGQGTCVNTPGSFECECFHGYESGFMLMKNCMDVDECARDPLLCRGGTCTNTDGSYECHCPPGHALAMGTACEDIDECSLSDGLCPHGHCVNVIGAFQCSCHHGFQSTADLQGCVDTDECRAGNGGCQVHCVNTEGSYQCSCGQGYSLMPDGRACADVNECEENPDICDNGQCTNEPGGHRCLCYNGFVATLDMRTCVDVDECDLNPHICLHGDCENTRGSFVCHCQLGYVIRKGATGCSDLDECELGGHSCDSHASCLNIPGSFSCRCQPGWVGDGFECHDRDECAFQEHGCSPRADCLNIPGSYRCSCHPGFTGDGFSCEDRDECAENVDLCENGQCLNAPGGYRCECEMGFNPTEDQRACQDVDECVLGNLCVFGICENLPGMFRCVCDEGYELDRSGGNCTDVNECADPVNCINGLCVNTPGSYQCNCPQDFELNPSGVGCVDTRVGNCFLDTHDRGDGGISCSAEIGVGVTRASCCCSLGRAWGNPCELCPMANTTEYRTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGDCVNTFGSFQCQCPPGYHLNEDTRICEDIDECSAHSGICGPGTCYNTLGNYTCVCPAEYLQVNGGNNCMDMRKSVCFRQYNGTCGNELTFNVTQKLCCCSYNIGQAWNRPCEACPTPASLDYQILCGNQVPGFVIDIHTGKPLDIDECGEIPVICANGICINQIGSFRCECPSGFSHNSALLVCEGAAPFVPCPTLCSLGKSFKLHELQFPASLYGANALLRGPIPSLTLHSGSGCSCPHPCLPRWLCSPDVDECASGESPCQQNANCINIPGSYRCKCARGYKLSPDGACVDMDECTTMAGQVCRFGQCLNTAGSFHCLCQDGFELTNDGKNCMDTNECLSLSGTCLPGTCQNLEGSFRCICPPGFQVQSDHCVDIDECSEEPNLCLFGTCTNSPGSFQCLCPPGFVLSDNGHRCFDTRQSFCFTHFEAGKCSVPKAFNTTKTRCCCSQRPGEGWNDPCELCPQEGSAAFQELCPFGHGAVPGLDDSREDVNECAENPGVCSNGLCVNTDGSFRCECPFGYSLDFTGVSCMDTDECSIGHPCGEGTCTNVIGGFECACADGFEPGPMMTCEDIDECSLNPLLCAFRCHNTEGSYMCTCPTGYTLREDGAMCRDVDECADGQQDCHARGMLCKNLIGTFACVCPPGTRPQLGSGEGCTDDDECRAQPSLCANGRCINTQGSFQCDCDEGFQPSPSLTECHDTRQGPCFSEVLQAACQAPSSSGEVTTRAECCCGGGRAWGPRCELCPLPGTSAHRKLCPHGSGYTADGQDVDECHVFAHLCPHGECINSLGSFRCHCQAGYAPDTAATACLDVDECSQAPPPCPFLCKNTEGSFLCACPRGYRLEENGRICRDLDECSSRQHNCQFFCVNTIGAFTCRCPPGFTQHHQACFDNDECLAQPGPCGPRGRCHNSPGSFNCECYQGFTLDSSGRGCKDVDECDGPHRCQHGCQNELGGYRCGCPQGFTPHSQWSQCVDENECVLSPTACGSASCHNTLGGFRCVCPSGFNFDQALGGCQDVDECAGRGSPCSYSCANTPGGFLCGCPQGYFRAGQGHCVSGLGFHPGPQDTTEEEELLSPEACYECKINGQPPPDRPRRSAHRDHQVSLASLDLEAPLTLGLNLSHLGRAEHILELLPALESLGGRVRYVIARGNKQGFFRVHHLRGLSSLQLGRRRPGPGTYQLEVVSVAGPWGTQSEGWLGDPALRLKVQLQLL", "length": 2842, "header": "tr|A0A5G2QFE9-1|A0A5G2QFE9_PIG Computationally mapped isoform of Fibrillin 3 OS=Sus scrofa OX=9823 GN=FBN3 PE=1 SV=1 CANONICAL=I3LI73-1" }, "locus": { "chromosome": "2", "start_pos": 71173026, "end_pos": 71104066, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087916.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087916.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063457.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063457.1" } ] } }, { "isoform_ac": "F1SA65-1", "url": "https://www.uniprot.org/uniprotkb/I3LI73/entry#F1SA65-1", "sequence": { "sequence": "SGGRRNRRAASWREAGRGGRRGPGPNVCGSRFHAYCCPGWRTLPGGNQCVVPICRHACGEGFCSRPNLCACADGKLAPSCGVRSGCSVSCMNGGSCRGESCLCQRGYTGTVCGQPVCDHGCYNGGRCIGPNHCACVYGFMGPQCERDYRTGPCFGQVVPEGCQNQLTGLVCTKALCCATVGRAWGFPCEFCPAQPHPCRRGFIPNIRTGACQDVDECQAVPGLCQGGSCVNTVGSFECRCPAGHRLNENSAKCEDVDECLSLPGLCSGGDCTNTVGSYVCTCPRGYASSLDGTRCLDHRAGTCFSALIVGRCARDLAGHYTHRQCCCDKGMCWAAGPVPELCPPRGSASNDASLQMSSSDCVPRGSRCCPPTLPPSPASLVRPRFRAREPTLTQVPLWALPAGTATLNQTIDICRHFTNLCLNGRCLPTSSSYRCECNVGYTQDMRGECIGERKPEVGVGCTLPGQESEGWGGCGDVDECMVSSGLCHHGRCINTEGSFQCVCNAGFELSPDGKNCVDHNECATTTMCANGVCLNEDGSFACLCKPGFLLAPGGRHCMDIDECQTPGICMNGHCTNTEGSFHCRCLGGLMVGADGRVCVDTHVRSTCYGAFDKGFCARPFPGAVTKSECCCASLDHGFGEPCQLCPNSPVKPSGPGLLFVGNINECALNPDICANGMCENLRGSYRCICNLGYEVGVAGKECQGEYTEQWAGRWVGRPHPSAVGGGAVLTDIDECLSNPCVNGVCRNLAGSYACECAPGSRLGPSGTVCLDSTKGTCWLKVQDGRCEANLPGATLRSECCATLGAAWGSPCERCDMDPACTRGFARMKGLTCEDVNECEVFPGVCTNGHCLNTAGSFRCQCPEGLTLDATGRLCVDVRLELCYLRWDEDECGAALPGKYRMDVCCCSVGAAWGATCEACPKPESAAFASLCPRGLGFASRDFLSGRPFYKDVNECKAFPGLCAQGTCRNTVGSFHCSCAGGFALDAQERNCTDIDECHISPDLCGQGTCVNTPGSFECECFHGYESGFMLMKNCMDVDECARDPLLCRGGTCTNTDGSYECHCPPGHALAMGTACEDIDECSLSDGLCPHGHCVNVIGAFQCSCHHGFQSTADLQGCVDTDECRAGNGGCQVHCVNTEGSYQCSCGQGYSLMPDGRACADVNECEENPDICDNGQCTNEPGGHRCLCYNGFVATLDMRTCVDVDECDLNPHICLHGDCENTRGSFVCHCQLGYVIRKGATGCSDLDECELGGHSCDSHASCLNIPGSFSCRCQPGWVGDGFECHDRDECAFQEHGCSPRADCLNIPGSYRCSCHPGFTGDGFSCEDRDECAENVDLCENGQCLNAPGGYRCECEMGFNPTEDQRACQDVDECVLGNLCVFGICENLPGMFRCVCDEGYELDRSGGNCTDVNECADPVNCINGLCVNTPGSYQCNCPQDFELNPSGVGCVDTRVGNCFLDTHDRGDGGISCSAEIGVGVTRASCCCSLGRAWGNPCELCPMANTTEYRTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGDCVNTFGSFQCQCPPGYHLNEDTRICEDIDECSAHSGICGPGTCYNTLGNYTCVCPAEYLQVNGGNNCMDMRKSVCFRQYNGTCGNELTFNVTQKLCCCSYNIGQAWNRPCEACPTPASLDYQILCGNQVPGFVIDIHTGKPLDIDECGEIPVICANGICINQIGSFRCECPSGFSHNSALLVCEDVDECASGESPCQQNANCINIPGSYRCKCARGYKLSPDGACVGRNECREIPNICSHGDCMDTVDSYTCQCHRGFRASADQTLCTDVDECDWQPCGNGTCKNVVGSYNCLCFSGFVAAHSGDCVDMDECTTMAGQVCRFGQCLNTAGSFHCLCQDGFELTNDGKNCMDTNECLSLSGTCLPGTCQNLEGSFRCICPPGFQVQSDHCVDIDECSEEPNLCLFGTCTNSPGSFQCLCPPGFVLSDNGHRCFDTRQSFCFTHFEAGKCSVPKAFNTTKTRCCCSQRPGEGWNDPCELCPQEGSAAFQELCPFGHGAVPGLDDSREDVNECAENPGVCSNGLCVNTDGSFRCECPFGYSLDFTGVSCMDTDECSIGHPCGEGTCTNVIGGFECACADGFEPGPMMTCEDIDECSLNPLLCAFRCHNTEGSYMCTCPTGYTLREDGAMCRDVDECADGQQDCHARGMLCKNLIGTFACVCPPGTRPQLGSGEGCTDDDECRAQPSLCANGRCINTQGSFQCDCDEGFQPSPSLTECHDTRQGPCFSEVLQAACQAPSSSGEVTTRAECCCGGGRAWGPRCELCPLPGTSAHRKLCPHGSGYTADDVDECHVFAHLCPHGECINSLGSFRCHCQAGYAPDTAATAYVDECSQAPPPCPFLCKNTEGSFLCACPRGYRLEENGRICRDLDECSSRQHNCQFFCVNTIGAFTCRCPPGFTQHHQACFDNDECLAQPGPCGPRGRCHNSPGSFNCECYQGFTLDSSGRGCKDVDECDGPHRCQHGCQNELGGYRCGCPQGFTPHSQWSQCVDENECVLSPTACGSASCHNTLGGFRCVCPSGFNFDQALGGCQDVDECAGRGSPCSYSCANTPGGFLCGCPQGYFRAGQGHCVSGLGFHPGPQDTTEEEELLSPEACYECKINGQPPPDRPRRSAHRDHQVPRGVYWVSLASLDLEAPLTLGLNLSHLGRAEHILELLPALESLGGRVRYVIARGNKQGFFRVHHLRGLSSLQLGRRRPGPGTYQVTPGYRQKNQFQHRASMPASTLPGSRLGWDLLNLMPKLEGWKTRVLTPSLCMHCV", "length": 2796, "header": "tr|F1SA65-1|F1SA65_PIG Computationally mapped isoform of Fibrillin-1 OS=Sus scrofa OX=9823 GN=FBN3 PE=1 SV=4 CANONICAL=I3LI73-1" }, "locus": { "chromosome": "2", "start_pos": 71174354, "end_pos": 71102210, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014846.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014846.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014445.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014445.4" } ] } }, { "isoform_ac": "I3LI73-1", "url": "https://www.uniprot.org/uniprotkb/I3LI73/entry#I3LI73-1", "sequence": { "sequence": "MVLEGLCLTRRGASTLTMARGPLARLLLACTALSCVAGVQGRWDGAVEAAGLGRVRRRGSPGFLQGPNVCGSRFHAYCCPGWRTLPGGNQCVVPICRHACGEGFCSRPNLCACADGKLAPSCGVSRGSGCSVSCMNGGSCRGESCLCQRGYTGTVCGQPVCDHGCYNGGRCIGPNHCACVYGFMGPQCERDYRTGPCFGQVVPEGCQNQLTGLVCTKALCCATVGRAWGFPCEFCPAQPHPCRRGFIPNIRTGACQDVDECQAVPGLCQGGSCVNTVGSFECRCPAGHRLNENSAKCEDVDECLSLPGLCSGGDCTNTVGSYVCTCPRGYASSLDGTRCLDHRAGTCFSALIVGRCARDLAGHYTHRQCCCDKGMCWAAGPVPELCPPRGSDEFQRLCAPGLPLLPSYPAPFPSLPGFGSSGRVGPGLGTARHSPHGSSGRGVPSLRFGDANIGTATLNQTIDICRHFTNLCLNGRCLPTSSSYRCECNVGYTQDMRGECIDMDECASSPCHHGDCVNTPGSYHCRCHEGFQATLTKQACVDVDECMVSSGLCHHGRCINTEGSFQCVCNAGFELSPDGKNCVDHNECATTTMCANGVCLNEDGSFACLCKPGFLLAPGGRHCMDIDECQTPGICMNGHCTNTEGSFHCRCLGGLMVGADGRVCVDTHVRSTCYGAFDKGFCARPFPGAVTKSECCCASLDHGFGEPCQLCPAKDSAEFQALCSSGLGITTDGRDINECALNPDICANGMCENLRGSYRCICNLGYEVGVAGKECQDVDECALNSLLCDNGRCWNSPGSYSCSCPQGFSFRQDTETCEDIDECLSNPCVNGVCRNLAGSYACECAPGSRLGPSGTVCLDSTKGTCWLKVQDGRCEANLPGATLRSECCATLGAAWGSPCERCDMDPACTRGFARMKGLTCEDVNECEVFPGVCTNGHCLNTAGSFRCQCPEGLTLDATGRLCVDVRLELCYLRWDEDECGAALPGKYRMDVCCCSVGAAWGATCEACPKPESAAFASLCPRGLGFASRDFLSGRPFYKDVNECKAFPGLCAQGTCRNTVGSFHCSCAGGFALDAQERNCTDIDECHISPDLCGQGTCVNTPGSFECECFHGYESGFMLMKNCMDVDECARDPLLCRGGTCTNTDGSYECHCPPGHALAMGTACEDIDECSLSDGLCPHGHCVNVIGAFQCSCHHGFQSTADLQGCVDTDECRAGNGGCQVHCVNTEGSYQCSCGQGYSLMPDGRACADVNECEENPDICDNGQCTNEPGGHRCLCYNGFVATLDMRTCVDVDECDLNPHICLHGDCENTRGSFVCHCQLGYVIRKGATGCSDLDECELGGHSCDSHASCLNIPGSFSCRCQPGWVGDGFECHDRDECAFQEHGCSPRADCLNIPGSYRCSCHPGFTGDGFSCEDRDECAENVDLCENGQCLNAPGGYRCECEMGFNPTEDQRACQDVDECVLGNLCVFGICENLPGMFRCVCDEGYELDRSGGNCTDVNECADPVNCINGLCVNTPGSYQCNCPQDFELNPSGVGCVDTRVGNCFLDTHDRGDGGISCSAEIGVGVTRASCCCSLGRAWGNPCELCPMANTTEYRTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGDCVNTFGSFQCQCPPGYHLNEDTRICEDIDECSAHSGICGPGTCYNTLGNYTCVCPAEYLQVNGGNNCMDMRKSVCFRQYNGTCGNELTFNVTQKLCCCSYNIGQAWNRPCEACPTPASLDYQILCGNQVPGFVIDIHTGKPLDIDECGEIPVICANGICINQIGSFRCECPSGFSHNSALLVCEDVDECASGESPCQQNANCINIPGSYRCKCARGYKLSPDGACVGRNECREIPNICSHGDCMDTVDSYTCQCHRGFRASADQTLCTDVDECDWQPCGNGTCKNVVGSYNCLCFSGFVAAHSGDCVDMDECTTMAGQVCRFGQCLNTAGSFHCLCQDGFELTNDGKNCMDTNECLSLSGTCLPGTCQNLEGSFRCICPPGFQVQSDHCVDIDECSEEPNLCLFGTCTNSPGSFQCLCPPGFVLSDNGHRCFDTRQSFCFTHFEAGKCSVPKAFNTTKTRCCCSQRPGEGWNDPCELCPQEGSAAFQELCPFGHGAVPGLDDSREDVNECAENPGVCSNGLCVNTDGSFRCECPFGYSLDFTGVSCMDTDECSIGHPCGEGTCTNVIGGFECACADGFEPGPMMTCEDIDECSLNPLLCAFRCHNTEGSYMCTCPTGYTLREDGAMCRDVDECADGQQDCHARGMLCKNLIGTFACVCPPGTRPQLGSGEGCTDDDECRAQPSLCANGRCINTQGSFQCDCDEGFQPSPSLTECHDTRQGPCFSEVLQAACQAPSSSGEVTTRAECCCGGGRAWGPRCELCPLPGTSAHRKLCPHGSGYTADGQDVDECHVFAHLCPHGECINSLGSFRCHCQAGYAPDTAATACLDVDECSQAPPPCPFLCKNTEGSFLCACPRGYRLEENGRICRDLDECSSRQHNCQFFCVNTIGAFTCRCPPGFTQHHQACFDNDECLAQPGPCGPRGRCHNSPGSFNCECYQGFTLDSSGRGCKDVDECDGPHRCQHGCQNELGGYRCGCPQGFTPHSQWSQCVDENECVLSPTACGSASCHNTLGGFRCVCPSGFNFDQALGGCQDVDECAGRGSPCSYSCANTPGGFLCGCPQGYFRAGQGHCVSGLGFHPGPQDTTEEEELLSPEACYECKINGQPPPDRPRRSAHRDHQVSLASLDLEAPLTLGLNLSHLGRAEHILELLPALESLGGRVRYVIARGNKQGFFRVHHLRGLSSLQLGRRRPGPGTYQLEVVSVAGPWGTQSEGWLGDPALRLKVQLQLL", "length": 2858, "header": "tr|I3LI73-1|I3LI73_PIG Isoform 1 of Fibrillin 3 OS=Sus scrofa OX=9823 GN=FBN3 PE=1 SV=2 CANONICAL=I3LI73-1" }, "locus": { "chromosome": "2", "start_pos": 71173026, "end_pos": 71104066, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032576.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032576.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023772.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023772.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1745, "start_aa": "Thr", "end_pos": 1745, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1745", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LI73", "url": "https://www.uniprot.org/uniprotkb/I3LI73" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738368", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738368", "resource": "KEGG Pathway" }, { "id": "R-SSC-1474228", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1474228", "resource": "Reactome", "description": "Degradation of the extracellular matrix" }, { "id": "R-SSC-1566948", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1566948", "resource": "Reactome", "description": "Elastic fibre formation" }, { "id": "R-SSC-2129379", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2129379", "resource": "Reactome", "description": "Molecules associated with elastic fibres" } ], "orthologs": [ { "uniprot_canonical_ac": "Q75N90-1", "protein_name": "Fibrillin-3", "gene_name": "FBN3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTLEGLYLARGPLARLLLAWSALLCMAGGQGRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCPGWRTFPGRSQCVVPICRRACGEGFCSQPNLCTCADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGRCIGPNRCACVYGFMGPQCERDYRTGPCFGQVGPEGCQHQLTGLVCTKALCCATVGRAWGLPCELCPAQPHPCRRGFIPNIHTGACQDVDECQAVPGLCQGGSCVNMVGSFHCRCPVGHRLSDSSAACEDYRAGACFSVLFGGRCAGDLAGHYTRRQCCCDRGRCWAAGPVPELCPPRGSNEFQQLCAQRLPLLPGHPGLFPGLLGFGSNGMGPPLGPARLNPHGSDARGIPSLGPGNSNIGTATLNQTIDICRHFTNLCLNGRCLPTPSSYRCECNVGYTQDVRGECIDVDECTSSPCHHGDCVNIPGTYHCRCYPGFQATPTRQACVDVDECIVSGGLCHLGRCVNTEGSFQCVCNAGFELSPDGKNCVDHNECATSTMCVNGVCLNEDGSFSCLCKPGFLLAPGGHYCMDIDECQTPGICVNGHCTNTEGSFRCQCLGGLAVGTDGRVCVDTHVRSTCYGAIEKGSCARPFPGTVTKSECCCANPDHGFGEPCQLCPAKDSAEFQALCSSGLGITTDGRDINECALDPEVCANGVCENLRGSYRCVCNLGYEAGASGKDCTDVDECALNSLLCDNGWCQNSPGSYSCSCPPGFHFWQDTEICKDVDECLSSPCVSGVCRNLAGSYTCKCGPGSRLDPSGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCATLGAAWGSPCERCEIDPACARGFARMTGVTCDDVNECESFPGVCPNGRCVNTAGSFRCECPEGLMLDASGRLCVDVRLEPCFLRWDEDECGVTLPGKYRMDVCCCSIGAVWGVECEACPDPESLEFASLCPRGLGFASRDFLSGRPFYKDVNECKVFPGLCTHGTCRNTVGSFHCACAGGFALDAQERNCTDIDECRISPDLCGQGTCVNTPGSFECECFPGYESGFMLMKNCMDVDECARDPLLCRGGTCTNTDGSYKCQCPPGHELTAKGTACEDIDECSLSDGLCPHGQCVNVIGAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVHCINTEGSYRCSCGQGYSLMPDGRACADVDECEENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDLNPHICLHGDCENTKGSFVCHCQLGYMVRKGATGCSDVDECEVGGHNCDSHASCLNIPGSFSCRCLPGWVGDGFECHDLDECVSQEHRCSPRGDCLNVPGSYRCTCRQGFAGDGFFCEDRDECAENVDLCDNGQCLNAPGGYRCECEMGFDPTEDHRACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINECADPVNCINGVCINTPGSYLCSCPQDFELNPSGVGCVDTRAGNCFLETHDRGDSGISCSAEIGVGVTRASCCCSLGRAWGNPCELCPMANTTEYRTLCPGGEGFQPNRITVILEDIDECQELPGLCQGGDCVNTFGSFQCECPPGYHLSEHTRICEDIDECSTHSGICGPGTCYNTLGNYTCVCPAEYLQVNGGNNCMDMRKSVCFRHYNGTCQNELAFNVTRKMCCCSYNIGQAWNRPCEACPTPISPDYQILCGNQAPGFLTDIHTGKPLDIDECGEIPAICANGICINQIGSFRCECPAGFNYNSILLACEDVDECGSRESPCQQNADCINIPGSYRCKCTRGYKLSPGGACVGRNECREIPNVCSHGDCMDTEGSYMCLCHRGFQASADQTLCMDIDECDRQPCGNGTCKNIIGSYNCLCFPGFVVTHNGDCVDFDECTTLVGQVCRFGHCLNTAGSFHCLCQDGFELTADGKNCVDTNECLSLAGTCLPGTCQNLEGSFRCICPPGFQVQSDHCIDIDECSEEPNLCLFGTCTNSPGSFQCLCPPGFVLSDNGHRCFDTRQSFCFTRFEAGKCSVPKAFNTTKTRCCCSKRPGEGWGDPCELCPQEGSAAFQELCPFGHGAVPGPDDSREDVNECAENPGVCTNGVCVNTDGSFRCECPFGYSLDFTGINCVDTDECSVGHPCGQGTCTNVIGGFECACADGFEPGLMMTCEDIDECSLNPLLCAFRCHNTEGSYLCTCPAGYTLREDGAMCRDVDECADGQQDCHARGMECKNLIGTFACVCPPGMRPLPGSGEGCTDDNECHAQPDLCVNGRCVNTAGSFRCDCDEGFQPSPTLTECHDIRQGPCFAEVLQTMCRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECRMLAHLCAHGECINSLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTKGSFLCSCPRGYLLEEDGRTCKDLDECTSRQHNCQFLCVNTVGAFTCRCPPGFTQHHQACFDNDECSAQPGPCGAHGHCHNTPGSFRCECHQGFTLVSSGHGCEDVNECDGPHRCQHGCQNQLGGYRCSCPQGFTQHSQWAQCVDENECALSPPTCGSASCRNTLGGFRCVCPSGFDFDQALGGCQEVDECAGRRGPCSYSCANTPGGFLCGCPQGYFRAGQGHCVSGLGFSPGPQDTPDKEELLSSEACYECKINGLSPRDRPRRSAHRDHQVNLATLDSEALLTLGLNLSHLGRAERILELRPALEGLEGRIRYVIVRGNEQGFFRMHHLRGVSSLQLGRRRPGPGTYRLEVVSHMAGPWGVQPEGQPGPWGQALRLKVQLQLL", 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"pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1078, "end_pos": 1080, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1494, "end_pos": 1496, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1590, "end_pos": 1592, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1679, "end_pos": 1681, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1710, "end_pos": 1712, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1720, "end_pos": 1722, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1910, "end_pos": 1912, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2085, "end_pos": 2087, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2765, "end_pos": 2767, "annotation": "n_glycosylation_sequon" }, { "start_pos": 459, "end_pos": 461, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], 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"end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LI80-1", "uniprot_ac": "I3LI80", "uniprot_id": "I3LI80_PIG", "mass": { "chemical_mass": 91913.0, "monoisotopic_mass": 91913.0 }, "refseq": { "ac": "XP_005658919", "name": "advillin isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658919" }, "gene_names": [ { "name": "AVIL", "type": "recommended", "evidence": [ { "id": "I3LI80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI80" } ] }, { "name": "AVIL", "type": "synonym", "evidence": [ { "id": "XP_005658919", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658919" } ] } ], "protein_names": [ { "name": "Villin-1", "type": "recommended", "evidence": [ { "id": "I3LI80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LI80/entry#names_and_taxonomy" } ] }, { "name": "advillin isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005658919", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658919" } ] } ], "function": [ { "annotation": "Epithelial cell-specific Ca(2+)-regulated actin-modifying protein that modulates the reorganization of microvillar actin filaments. Plays a role in the actin nucleation, actin filament bundle assembly, actin filament capping and severing. Binds phosphatidylinositol 4,5-bisphosphate (PIP2) and lysophosphatidic acid (LPA); binds LPA with higher affinity than PIP2. Binding to LPA increases its phosphorylation by SRC and inhibits all actin-modifying activities. Binding to PIP2 inhibits actin-capping and -severing activities but enhances actin-bundling activity. Regulates the intestinal epithelial cell morphology, cell invasion, cell migration and apoptosis. Protects against apoptosis induced by dextran sodium sulfate (DSS) in the gastrointestinal epithelium. Appears to regulate cell death by maintaining mitochondrial integrity. Enhances hepatocyte growth factor (HGF)-induced epithelial cell motility, chemotaxis and wound repair.", "evidence": [ { "database": "UniProtKB", "id": "I3LI80", "url": "https://www.uniprot.org/uniprotkb/I3LI80#function" }, { "database": "UniProtKB", "id": "ARBA00055380", "url": "https://www.uniprot.org/uniprotkb/ARBA00055380#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LI80", "url": "https://www.uniprot.org/uniprotkb/I3LI80" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AVIL", "url": "https://www.uniprot.org/uniprotkb/I3LI80", "locus": { "chromosome": "5", "start_pos": 23087956, "end_pos": 23110602, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029571", "url": "https://www.ensembl.org/id/ENSSSCG00000029571" } ] } } ], "crossref": [ { "id": "ENSSSCG00000029571", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029571", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11288", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11288", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11289", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11289", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11290", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11290", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11291", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11291", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11292", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11292", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11293", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11293", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624986", "url": "https://www.ncbi.nlm.nih.gov/gene/100624986", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003128", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003128", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007122", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007122", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007123", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007123", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029006", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029006", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036180", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036180", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036886", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036886", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624986", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624986", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DPNIWSA", "url": "https://omabrowser.org/oma/group/DPNIWSA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LI80", "url": "https://www.orthodb.org/?gene=I3LI80", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11977", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11977", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11977:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11977:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00626", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00626", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02209", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02209", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005658919", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658919", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LI80", "url": "https://www.uniprot.org/uniprotkb/I3LI80", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI80-1", "url": "https://www.uniprot.org/uniprotkb/I3LI80-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLSSAFRAVGNDPGIITWRIEKMELALVPLSAHGNFYEGDCYVILSTRRAGSLLSQDIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREVQYHESDTFRGYFKQGIIYKKGGVASGMKHVETNTYDVKRLLHVKGKRNIRATEVEVSWDSFNQGDVFLLDLGKVIIQWNGPESSSGERLKAMLLAKDIRDRERGGRAEIGVIEGDKEAASPELMKVLQDTLGRRSIIKPAIPDEITDQQQKSNITLYHVSDSAGQLAVTEVATRPLVQELLNHDDCYILDQSGTKIYVWKGRGATKVEKQMAMSKALNFIKMKGYPSSTNVETVNDGAESAMFKQLFQKWSVKEQTVGLGKTFSIGKIAQVFQDKFDVTLLHTKPEIAAQERMVDDGNGKVEVWRIENLELVPVEHQWYGFFYGGDCYLVLYTYEMNGKPHYILYIWQGRHASQDELAASAYQAVEVDRQFDGAPVQVRVTMGKEPHHFMAIFKGKLVIFEGGTSRKGNAEPDPPVRLFQIQGNDKSNTKAVEVPAFTSSLNSNDVFLLRTQAEHYLWYGKGSSGDERAMAKELARFLCDGTENTVAEGQEPAEFWDLLGGKTPYANDKRLQQEILDVQPRLFECSNKTGRFIVTEITDFTQDDLNPGDVMLLDTWDQVFLWIGAEANAEEKERALATAQEYLHTHPSGRDASTPVLIIKQGYEPPTFTGWFLAWDSHIWSAGKSYEQLKEELGDAAAITRITADMRDTTIPLDSEPKYYPIEVLLKNQNQELPEDVNPAKKENYLSEQDFVSVFGITRGQFAALPAWKQLQMKKEKGLF", "length": 816, "header": "tr|I3LI80-1|I3LI80_PIG Isoform 1 of Villin-1 OS=Sus scrofa OX=9823 GN=AVIL PE=1 SV=2 CANONICAL=I3LI80-1" }, "isoforms": [ { "isoform_ac": "I3LI80-1", "url": "https://www.uniprot.org/uniprotkb/I3LI80/entry#I3LI80-1", "sequence": { "sequence": "MSLSSAFRAVGNDPGIITWRIEKMELALVPLSAHGNFYEGDCYVILSTRRAGSLLSQDIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREVQYHESDTFRGYFKQGIIYKKGGVASGMKHVETNTYDVKRLLHVKGKRNIRATEVEVSWDSFNQGDVFLLDLGKVIIQWNGPESSSGERLKAMLLAKDIRDRERGGRAEIGVIEGDKEAASPELMKVLQDTLGRRSIIKPAIPDEITDQQQKSNITLYHVSDSAGQLAVTEVATRPLVQELLNHDDCYILDQSGTKIYVWKGRGATKVEKQMAMSKALNFIKMKGYPSSTNVETVNDGAESAMFKQLFQKWSVKEQTVGLGKTFSIGKIAQVFQDKFDVTLLHTKPEIAAQERMVDDGNGKVEVWRIENLELVPVEHQWYGFFYGGDCYLVLYTYEMNGKPHYILYIWQGRHASQDELAASAYQAVEVDRQFDGAPVQVRVTMGKEPHHFMAIFKGKLVIFEGGTSRKGNAEPDPPVRLFQIQGNDKSNTKAVEVPAFTSSLNSNDVFLLRTQAEHYLWYGKGSSGDERAMAKELARFLCDGTENTVAEGQEPAEFWDLLGGKTPYANDKRLQQEILDVQPRLFECSNKTGRFIVTEITDFTQDDLNPGDVMLLDTWDQVFLWIGAEANAEEKERALATAQEYLHTHPSGRDASTPVLIIKQGYEPPTFTGWFLAWDSHIWSAGKSYEQLKEELGDAAAITRITADMRDTTIPLDSEPKYYPIEVLLKNQNQELPEDVNPAKKENYLSEQDFVSVFGITRGQFAALPAWKQLQMKKEKGLF", "length": 816, "header": "tr|I3LI80-1|I3LI80_PIG Isoform 1 of Villin-1 OS=Sus scrofa OX=9823 GN=AVIL PE=1 SV=2 CANONICAL=I3LI80-1" }, "locus": { "chromosome": "5", "start_pos": 23104761, "end_pos": 23088416, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032121.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032121.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023779.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023779.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LI80", "url": "https://www.uniprot.org/uniprotkb/I3LI80" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624986", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624986", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "O75366-1", "protein_name": "Advillin", "gene_name": "AVIL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLTSAFRAVDNDPGIIVWRIEKMELALVPVSAHGNFYEGDCYVILSTRRVASLLSQDIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREVQYHESDTFRGYFKQGIIYKQGGVASGMKHVETNTYDVKRLLHVKGKRNIRATEVEMSWDSFNRGDVFLLDLGKVIIQWNGPESNSGERLKAMLLAKDIRDRERGGRAKIGVIEGDKEAASPELMKVLQDTLGRRSIIKPTVPDEIIDQKQKSTIMLYHISDSAGQLAVTEVATRPLVQDLLNHDDCYILDQSGTKIYVWKGKGATKAEKQAAMSKALGFIKMKSYPSSTNVETVNDGAESAMFKQLFQKWSVKDQTMGLGKTFSIGKIAKVFQDKFDVTLLHTKPEVAAQERMVDDGNGKVEVWRIENLELVPVEYQWYGFFYGGDCYLVLYTYEVNGKPHHILYIWQGRHASQDELAASAYQAVEVDRQFDGAAVQVRVRMGTEPRHFMAIFKGKLVIFEGGTSRKGNAEPDPPVRLFQIHGNDKSNTKAVEVPAFASSLNSNDVFLLRTQAEHYLWYGKGSSGDERAMAKELASLLCDGSENTVAEGQEPAEFWDLLGGKTPYANDKRLQQEILDVQSRLFECSNKTGQFVVTEITDFTQDDLNPTDVMLLDTWDQVFLWIGAEANATEKESALATAQQYLHTHPSGRDPDTPILIIKQGFEPPIFTGWFLAWDPNIWSAGKTYEQLKEELGDAAAIMRITADMKNATLSLNSNDSEPKYYPIAVLLKNQNQELPEDVNPAKKENYLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF", "length": 819 }, "evidence": [ { "id": "I3LI80", "url": "https://omabrowser.org/oma/group/I3LI80/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O81644-1", "protein_name": "Villin-2", "gene_name": "VLN2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGTAAVKTVELDAVLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKTVEEEVFETRLYTCKGKRAIRLKQVPFARSSLNHDDVFILDTEEKIYQFNGANSNIQERAKALEVVQYLKDKYHEGTCDVAIVDDGKLDTESDSGAFWVLFGGFAPIGRKVANDDDIVPESTPPKLYCITDGKMEPIDGDLSKSMLENTKCYLLDCGAEIYIWVGRVTQVDERKAASQSAEEFLASENRPKATHVTRVIQGYESHSFKSNFDSWPSGSATPGNEEGRGKVAALLKQQGVGLKGIAKSAPVNEDIPPLLESGGKLEVWYVNGKVKTPLPKEDIGKLYSGDCYLVLYTYHSGERKDEYFLSCWFGKKSIPEDQDTAIRLANTMSNSLKGRPVQGRIYEGKEPPQFVALFQPMVVLKGGLSSGYKSSMGESESTDETYTPESIALVQVSGTGVHNNKAVQVETVATSLNSYECFLLQSGTSMFLWHGNQSTHEQLELATKVAEFLKPGITLKHAKEGTESSTFWFALGGKQNFTSKKASSETIRDPHLFSFAFNRGKFQVEEIYNFAQDDLLTEDIYFLDTHAEVFVWVGQCVEPKEKQTVFEIGQKYIDLAGSLEGLHPKVPIYKINEGNEPCFFTTYFSWDATKAIVQGNSFQKKASLLFGTHHVVEDKSNGGNQGLRQRAEALAALNSAFNSSSNRPAYSSQDRLNESHDGPRQRAEALAALSSAFNSSSSSTKSPPPPRPVGTSQASQRAAAVAALSQVLVAENKKSPDTSPTRRSTSSNPADDIPLTEAKDEEEASEVAGLEAKEEEEVSPAADETEAKQETEEQGDSEIQPSGATFTYEQLRAKSENPVTGIDFKRREAYLSEEEFQSVFGIEKEAFNNLPRWKQDLLKKKFDLF", "length": 976 }, "evidence": [ { "id": "I3LI80", "url": "https://omabrowser.org/oma/group/I3LI80/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O88398-1", "protein_name": "Advillin", "gene_name": "Avil", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSLSSAFRAVSNDPRIITWRIEKMELALVPLSAHGNFYEGDCYIVLSTRRVGSLLSQNIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREVQYHESDTFRGYFKQGIIYKKGGVASGMKHVETNTYDVKRLLHVKGKRNIQATEVEMSWDSFNRGDVFLLDLGMVIIQWNGPESNSGERLKAMLLAKDIRDRERGGRAEIGVIEGDKEAASPGLMTVLQDTLGRRSMIKPAVSDEIMDQQQKSSIMLYHVSDTAGQLSVTEVATRPLVQDLLNHDDCYILDQSGTKIYVWKGKGATKVEKQAAMSKALDFIKMKGYPSSTNVETVNDGAESAMFKQLFQKWSVKDQTTGLGKIFSTGKIAKIFQDKFDVSLLHTKPEVAAQERMVDDGKGQVEVWRIENLELVPVEYQWHGFFYGGDCYLVLYTYDVNGKPHYILYIWQGRHASRDELAASAYRAVEVDQQFDGAPVQVRVSMGKEPRHFMAIFKGKLVIYEGGTSRKGNEEPDPPVRLFQIHGNDKSNTKAVEVSASASSLNSNDVFLLRTQAEHYLWYGKGSSGDERAMAKELVDLLCDGNADTVAEGQEPPEFWDLLGGKTAYANDKRLQQETLDVQVRLFECSNKTGRFLVTEVTDFTQEDLSPGDVMLLDTWDQVFLWIGAEANATEKKGALSTAQEYLVTHPSGRDPDTPILIIKQGFEPPTFTGWFLAWDPHIWSEGKSYEQLKNELGDATAIVRITADMKNATLYLNPSDGEPKYYPVEVLLKGQNQELPEDVDPAKKENYLSEQDFVSVFGITRGQFTALPGWKQLQLKKERGLF", "length": 819 }, "evidence": [ { "id": "I3LI80", "url": "https://omabrowser.org/oma/group/I3LI80/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P36418-1", "protein_name": "Protovillin", "gene_name": "vilB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPPLELPTQRKRVIPSKFGILKRNAEIEAEKNRENLQQSSCFSHINEIGKEIGLEIWKIIDDSTIQKVPKVNHSTFETNKSYLLLMGQFYDGNMNIKTYNIHFWIGELLINSQETINFCNDRIEELERIIKYNQKQFDSEQFYPEPILYREFQGKEGDIFMSYFKSYGGPRYVAPLKLTSASAAIATAAKQYKLFHLKGRRNIRVKQVDISSKSLNSGDVFVLDCEDFIYQWNGSESSRLEKGKGLDLTIRLRDEKSAKAKIIVMDENDTDKDHPEFWKRLGGCKDDVQKAEQGGDDFAYEKKSVEQIKLYQVENLNYEVHLHLIDPIGDVYSTTQLNAEFCYILDCETELYVWLGKASANDQRTVAMANAMDLLHEDNRPSWTPIIKMTQGSENTLFKDKFKKGSWGEYVNDNFEKKPITGKGVAAKAVQEKINVDALHNPEKYQLSKEERKSTIPTLHHVDDKHRGELKIWHVRNRNKFEISQSEFGLFYNQSCYLVLFTLFAADGSNNSILYYWQGRFSSSEDKGAAALLAKDVGKELHRSCIHVRTVQNKEPNHFLEHFQGRMVVFKGSRPNATTEVSLENLSSSLQGLYHVRGTEPINIHSIQVEKAISSLDSNDSFILVNFKNTISYIWVGKYSDEKEAALQISSNVFTGYNFQLIDEGDETSEFWESLETNSSLSLLKDYYTQLRTVEQEKKTRLFQCSNNSGVFKVFEIHDFSQDDLDSDDVMILDNQKQIFVWVGKESSDTEKLMANETALEYIMNAPTHRRDDPIFTIQDGFEPHEFTFNFHAWQVNKTQQDSYKSKLSAILGSNNSGPASPIMLPTSGVTLKPTTAATPKPITTPTVTTPKPITTPTVATLKTVTPAVTLKPTTVTTPSKVATTTNTSTPSPTTITTFYPLSVLKQKTNLPNDIDKSCLHLYLSDEEFLSTFKMTKEIFQKTPAWKTKQLRVDNGLF", "length": 959 }, "evidence": [ { "id": "I3LI80", "url": "https://omabrowser.org/oma/group/I3LI80/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9WU06-1", "protein_name": "Advillin", "gene_name": "Avil", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSAFRTVTNDPGIITWRIEKMELVLVPLSAHGNFYEGDCYIILSTRRVGSLLSQNIHFWIGKDSSQDEQSCAAIYTTQLDDYLGGSPVQHREVQYHESDTFRGYFKRGIIYKKGGVASGMKHVETNTYDVKRLLHVKGKRNIRATEVEMSWDSFNQGDVFLLDLGMVIIQWNGPESNSGERLKAMLLAKDIRDRERGGRAEIGVIEGDKEAASPELMTVLQNTLGRRSIIKPAVPDEVTDQQQKSTIMLYHVSDTTGQLSVTEVATRPLVQELLNHDDCYILDQSGTKIYVWKGKGATKVEKQAAMSKALDFIKMKGYPSSTNVETVNDGAESAMFKQLFQKWSVKDQTTGLGKTFSIGKIAKIFQDKFDVTLLHTKPEVAAQERMVDDGNGKVEVWRIENLELVPVEYQWHGFFYGGDCYLVLYTYDVNGKPCYILYIWQGRHASQDELAASAYQAVEVDQQFGGAPVQVRVSMGKEPRHFMAIFKGKLVIYEGGTSRKGNVEPDPPVRLFQIHGNDKSNTKAVEVSASASSLNSNDVFLLWTQAEHYLWYGKGSSGDERAMAKELAELLCDGDADTVAEGQEPPEFWDLLGGKAPYANDKRLQQETLDIQVRLFECSNKTGRFLVTEVTDFTQDDLSPGDVMLLDTWDQVFLWIGAEANATEKEGALSTAQEYLVTHPSGRDPDTPILIIKQGFEPPTFTGWFLAWDPHIWSEGKSYEQLKNELGDATAIVRITTDMKNATLSLNSSESGPKYYPVEVLLKSQDQELPEDVDPTKKENYLSERDFVSVFGITRGQFVSLPGWKQLQLKKEAGLF", "length": 819 }, "evidence": [ { "id": "I3LI80", "url": "https://omabrowser.org/oma/group/I3LI80/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "phosphatidylinositol-4,5-bisphosphate binding", "id": "GO:0005546", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005546", "evidence": [ { "database": "UniProtKB", "id": "I3LI80", "url": "https://www.uniprot.org/uniprotkb/I3LI80" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "I3LI80", "url": "https://www.uniprot.org/uniprotkb/I3LI80" } ], "pmid": "" }, { "name": "Arp2/3 complex binding", "id": "GO:0071933", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071933", "evidence": [ { "database": "UniProtKB", "id": "I3LI80", "url": "https://www.uniprot.org/uniprotkb/I3LI80" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "actin filament", "id": "GO:0005884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005884", 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"id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPP1R15B", "url": "https://www.uniprot.org/uniprotkb/I3LIA2", "locus": { "chromosome": "9", "start_pos": 65056398, "end_pos": 65066775, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015282", "url": "https://www.ensembl.org/id/ENSSSCG00000015282" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015282", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015282", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512360", "url": "https://www.ncbi.nlm.nih.gov/gene/100512360", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019512", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019512", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019523", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019523", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051254", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051254", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512360", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512360", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GDSPTQC", "url": "https://omabrowser.org/oma/group/GDSPTQC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LIA2", "url": "https://www.orthodb.org/?gene=I3LIA2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16489", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16489", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16489:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16489:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10472", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10472", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10488", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10488", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005656728", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656728", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIA2-1", "url": "https://www.uniprot.org/uniprotkb/I3LIA2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPAEDGSRDRAAPRPRSRFRLPFFPWRSRAGTSKFPAPPAPGHSGDPRQASCPLPEARSSSWMQLLSQLFAPLPGLFQKLLIWSQLFGGMIPTRWLDFTGGYGALRALKAREEPAAPTAPKSLLRFDPSADAAANPLDWLEEGIHWQCSPADLALELKAKGRALESAAHAFLLEQQQLWRLELVPGSFQASLISDRELGPSPSEPLNVQRLSNVNVVSYLLNSSYLDGLPRVELSYQSSAGRGKLVDFQALSPESGSLDEVLSSHPQPLNAEIAHASWQECPPLSREGLPEIHHLRMKRLEFLQQASKGQGLPTPDQDHGYHSLEEEHSLLRMDLKHPRDSPTQCIPVPGTAQEPTEEKIELLTEEVPLALERHDSSESCASCEFPAEQEPGEDQISVVDNSDIEDDLPTSARPACSNKLIDYILGGAASDLETSSDSEGEDWDEDAEDDGFDSDGSLSDSDLERDSEGLHLWNSFYSVDPYNPQNFTATIQTAARILPRESSDSEKDLSDQSDVENSPQTGSLPESPDHNSGEDDDWESSADEAESLRLWNSFCNSDDPYNLLNFKAPFQTSGKNGKGCRDSERPPESIVTISDCHSLLSCEVHLLGSRENECPDLVQGGVLSGERHTHTQRKKVTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEDAIGYCLTFEHRERIFNRLQETCFKELNVFEQC", "length": 709, "header": "tr|I3LIA2-1|I3LIA2_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit 15B OS=Sus scrofa OX=9823 GN=PPP1R15B PE=3 SV=1 CANONICAL=I3LIA2-1" }, "isoforms": [ { "isoform_ac": "I3LIA2-1", "url": "https://www.uniprot.org/uniprotkb/I3LIA2/entry#I3LIA2-1", "sequence": { "sequence": "MEPAEDGSRDRAAPRPRSRFRLPFFPWRSRAGTSKFPAPPAPGHSGDPRQASCPLPEARSSSWMQLLSQLFAPLPGLFQKLLIWSQLFGGMIPTRWLDFTGGYGALRALKAREEPAAPTAPKSLLRFDPSADAAANPLDWLEEGIHWQCSPADLALELKAKGRALESAAHAFLLEQQQLWRLELVPGSFQASLISDRELGPSPSEPLNVQRLSNVNVVSYLLNSSYLDGLPRVELSYQSSAGRGKLVDFQALSPESGSLDEVLSSHPQPLNAEIAHASWQECPPLSREGLPEIHHLRMKRLEFLQQASKGQGLPTPDQDHGYHSLEEEHSLLRMDLKHPRDSPTQCIPVPGTAQEPTEEKIELLTEEVPLALERHDSSESCASCEFPAEQEPGEDQISVVDNSDIEDDLPTSARPACSNKLIDYILGGAASDLETSSDSEGEDWDEDAEDDGFDSDGSLSDSDLERDSEGLHLWNSFYSVDPYNPQNFTATIQTAARILPRESSDSEKDLSDQSDVENSPQTGSLPESPDHNSGEDDDWESSADEAESLRLWNSFCNSDDPYNLLNFKAPFQTSGKNGKGCRDSERPPESIVTISDCHSLLSCEVHLLGSRENECPDLVQGGVLSGERHTHTQRKKVTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEDAIGYCLTFEHRERIFNRLQETCFKELNVFEQC", "length": 709, "header": "tr|I3LIA2-1|I3LIA2_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit 15B OS=Sus scrofa OX=9823 GN=PPP1R15B PE=3 SV=1 CANONICAL=I3LIA2-1" }, "locus": { "chromosome": "9", "start_pos": 65066316, "end_pos": 65059777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029335.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029335.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023803.1", "url": "https://www.ensembl.org/id/ENSSSCP00000023803.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 119, "start_aa": "Thr", "end_pos": 119, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr119", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512360", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512360", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZP67-1", "protein_name": "Protein phosphatase 1, regulatory subunit 15B", "gene_name": "Ppp1r15b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METGTHRARKRPTSRMGSWFRLPFLRRSHACTSEFPKPSSRPNLEVSARPEPRTRYWTKLLSQLLALLPSLLQKLLIWSQLFGGMIPTRWLDFSASYSALRALRGREESAAPTVQKSLNSLRLDSSSEDLVVSSLDWLEEGLQGQCSSSDLELKFKAQERALDSTAHTFLLEQQLWGVELLPGSLQTGLVSHRELGSSSSGPLSTQSLGNFKVVSYLLNPSYLDCLPQLELRCQNSVGGGQLVDFRTLSPESCYLSEDACHPQPLCAEMSATAWRRCPPLSTEGLPEIHHLRMKRLEFLQANKGQELPTPDQDNGYHSLEEEHCLLRMDPQHCTDKAAQAVSPAGASPQPTEKKVELVVEEVLQSPQGSSLSCELSVQKECEDYSDIGGNLPVSTRPACTNKLIDYILGGASSDLDTSSDSESEDWDEEPEDDGFDSDGSLSESDREQDSEGLHLWNSFYSVDPYNPQNFTATIQTAARIAPRDPSDSEKSWSGNSDVGSSQATLLPQTPDQSSGEEDDWESSADEAENLRLWNSFCNSEDPYNLLNFKAPFQTSGKSWKGSQASSEATVVFSGHQTLLSCEAQLLESQEDNCPGCGLGEALSGERYTHIKRKKVTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEVAIGYCLTFEHRERVFSRLQDHVSKDLLLYSSAKQREQPAALTHSISYLRGFS", "length": 707 }, "evidence": [ { "id": "I3LIA2", "url": "https://omabrowser.org/oma/group/I3LIA2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BKX2-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15B", "gene_name": "PPP1R15B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEPAADSSREPDPRFRLPSFFPRPSGSGTSRFPAPLSPEPDPRLAPSPPPEARSSSWMQLLSQLLAPLPGLLQKLLVWSQLFGGMIPTRWLDFAGGYGLLRARKEPAAPSAPKALSSLRLDPSADAAASPLDWLEGGLHWQCSPPDLELELKPKGRALDSAAHAFLLEQPLWGVELVPRSVQARLFSDPELGPSPSGPLSVQRLSNVSVVSYLLNPSYLDCLPRVELSYQSSVGSCELVDFQALSPESGCLDEASSYPQPLNAEMAPASWQGCPPLSREGLPEIHHLRMKRLEFLQQASKGQALPTPDQDHGYHSLEEEHSLLRMEPKHFGDSPTQCVPAAGAVPGTAQEPTEEKTELLIREVPFGLERQGPSGGILSCETGQELGEDQISVVDSSDIDDDLPISARPACSNKLIDYILGGAASDLETSSDSEDVDWDEDVEDDGFDSDSSFSESDLEQDSEGLHLWNSFYSVDPYNPQNFTATIQTAARILPGNPSDSEKDLSDKSDLGNSPQTESLPEFPDHNSGDDDDWESSADEAESLKLWNSFCNSDDPYNLLNFKAPFQTGKNWKSYLDSERPSEPISECHTLLSCKGQLLGSPESKCPDLVRGVVLSGETHTHIRRKKVTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEEAIGYCLTFEHREKMFNRLQQTCFKGLNVFEQC", "length": 698 }, "evidence": [ { "id": "I3LIA2", "url": "https://omabrowser.org/oma/group/I3LIA2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5SWA1-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15B", "gene_name": "PPP1R15B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPGTGGSRKRLGPRAGFRFWPPFFPRRSQAGSSKFPTPLGPENSGNPTLLSSAQPETRVSYWTKLLSQLLAPLPGLLQKVLIWSQLFGGMFPTRWLDFAGVYSALRALKGREKPAAPTAQKSLSSLQLDSSDPSVTSPLDWLEEGIHWQYSPPDLKLELKAKGSALDPAAQAFLLEQQLWGVELLPSSLQSRLYSNRELGSSPSGPLNIQRIDNFSVVSYLLNPSYLDCFPRLEVSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQGCPPLSTEGLPEIHHLRMKRLEFLQQASKGQDLPTPDQDNGYHSLEEEHSLLRMDPKHCRDNPTQFVPAAGDIPGNTQESTEEKIELLTTEVPLALEEESPSEGCPSSEIPMEKEPGEGRISVVDYSYLEGDLPISARPACSNKLIDYILGGASSDLETSSDPEGEDWDEEAEDDGFDSDSSLSDSDLEQDPEGLHLWNSFCSVDPYNPQNFTATIQTAARIVPEEPSDSEKDLSGKSDLENSSQSGSLPETPEHSSGEEDDWESSADEAESLKLWNSFCNSDDPYNPLNFKAPFQTSGENEKGCRDSKTPSESIVAISECHTLLSCKVQLLGSQESECPDSVQRDVLSGGRHTHVKRKKVTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEDAIGYCLTFEHRERMFNRLQGTCFKGLNVLKQC", "length": 713 }, "evidence": [ { "id": "I3LIA2", "url": "https://omabrowser.org/oma/group/I3LIA2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BFW3-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15B", "gene_name": "Ppp1r15b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METGTHRARKRPGPRLGSWFRLPFLRRSHACSSEFPPPSSRQNPGNSALPERRTRYWTKLLSQLLALLPSLFQKLLLWSQLFGGLIPTRWLDFAASYSALRALRGREESAAPTVQKSLSSLRLDSSEDLVVSSLDWLEEGLQWQCSSSDLELKLKAQERALDSAAPTFLLEQQLWGVELLPSSLQAGLVSHRELDSSSSGPLSVQSLGNFKVVSYLLNPSYLDYLPQLGLRCQSSAGGGQFVGFRTLTPESCYLSEDGCHPQPLRAEMSATAWRRCPPLSTEGLPEIHHLRMKRLEFLQANKGQELPTPDQDNGYHSLEEEHNLLRMDPQHCTDNPAQAVSPAADRPEPTEKKPELVIQEVSQSPQGSSLFCELPVEKECEEDHTNATDLSDRGESLPVSTRPVCSNKLIDYILGGAPSDLEASSDSESEDWGEEPEDDGFDSDGSLSESDVEQDSEGLHLWNSFHSVDPYNPQNFTATIQTAARIAPRDPSDSGTSWSGSCGVGSCQEGPLPETPDHSSGEEDDWEPSADEAENLKLWNSFCHSEDPYNLLNFKAPFQPSGKNWKGRQDSKASSEATVAFSGHHTLLSCKAQLLESQEDNCPGCGLGEALAGERYTHIKRKKVTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEVAIGYCLAFEHREKMFNRLRIESKDLLLYSNVKK", "length": 697 }, "evidence": [ { "id": "I3LIA2", "url": "https://omabrowser.org/oma/group/I3LIA2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "eukaryotic initiation factor eIF2 binding", "id": "GO:0071074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071074", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" }, { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" }, { "name": "protein phosphatase regulator activity", "id": "GO:0019888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019888", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" }, { "name": "protein phosphatase 1 binding", "id": "GO:0008157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008157", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "protein phosphatase type 1 complex", "id": "GO:0000164", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000164", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "response to endoplasmic reticulum stress", "id": "GO:0034976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034976", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" }, { "name": "regulation of protein metabolic process", "id": "GO:0051246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051246", "evidence": [ { "database": "UniProtKB", "id": "I3LIA2", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 487, "end_pos": 489, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LIA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" }, { "id": "PF10488", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10488" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein phosphatase 1 regulatory subunit 15A/B C-terminal", "eco_id": "ECO_0000259", "start_pos": 465, "end_pos": 695, "start_aa": "Glu", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LIA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LIA2" }, { "id": "PF10472", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10472" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein phosphatase 1 regulatory subunit 15B N-terminal", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 406, "start_aa": "Met", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 119 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 223, "end_pos": 225 }, { "start_pos": 487, "end_pos": 489 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", 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CANONICAL=I3LIB1-1" }, "locus": { "chromosome": "17", "start_pos": 50923345, "end_pos": 50903319, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025578.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025578.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023812.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023812.2" } ] } }, { "isoform_ac": "I3LQ10-1", "url": "https://www.uniprot.org/uniprotkb/I3LIB1/entry#I3LQ10-1", "sequence": { "sequence": 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"MLSGERKEGGSPRFGKLHLPVGLWINSPRKQLAKLGRRWPSAASVKSSSSDTGSRSSEPLPPPPPHVELRRVGAVKAAGGASGSRAKRISQLFRGSGTGTTGSGGAGGPGTPGAAQRWASEKKLPELAAGVAPEPPLAARATAPPGVLKIFGAGLASGANYKSVLATARSTARELVAEALERYGLAGSPGSGPGESSCVDAFALCDALGRPGAGAVGSGEWRAEHLRVLGDSERPLLVQELWRARPGWARRFELRGREEARRLEQEPSGRRTAMVSTGAPSWRPQKNRSRAASGGAALASPSPGSGSGPPAGSGGKERSENLSLRRSVSELSLQGRRRRQQERRQQALSMAPGAADAQIGPVDPGDFDQLTQCLIQAPSNRPYFLLLQGYQDAQDFVVYVMTREQHVFGRGGNSSARGASPAPYVDTFLNAPDILPRHCTVRAGPEPPAMVRPSRGAPVTHNGCLLLREAELHPGDLLGLGEHFLFMYKDPRSGGSGPARPSWLPARPGATPPGPGWAFSCRLCGRGLQERGEALAAYLDGREPVLRFRPREEEALLGEIVHTAATGAGDLPPLGPATLLALCVQHSARELELGHLPRLLGRLARLIKEAVWEKIKEIGDRQPENHPEGVPEVPLTPEAVSVELQPLMLWMANTTELLSFVQEKVLEMEKEADQEGELGPQLCNDLELCDEAMALLDEVIMCTFQQSVYYLTKTLYSTLPALLDSNPFTAGAELPGPGAELGAMPPGLRPTLGVFQAALELTSQCELHPDLVSQTFGYLFFFSNASLLNSLMERGQGRPFYQWSRAVQIRTNLDLVLDWLQGAGLGDIATEFFRKLSMAVNLLCVPRTSLLKASWSSLRTDHPTLTPAQLHHLLSHYQLGPGRGPPPAWDPPSAERDAVDTGDIFESFSSHPPLILPLGSSRLCLTGPVTDDALHRELRRLRRLLWDLEQQELPANHRHGPPVTTPP", "length": 967, "header": "tr|I3LIC8-1|I3LIC8_PIG Isoform 1 of Ras-interacting protein 1 OS=Sus scrofa OX=9823 GN=RASIP1 PE=1 SV=3 CANONICAL=I3LIC8-1" }, "isoforms": [ { "isoform_ac": "I3LIC8-1", "url": "https://www.uniprot.org/uniprotkb/I3LIC8/entry#I3LIC8-1", "sequence": { "sequence": "MLSGERKEGGSPRFGKLHLPVGLWINSPRKQLAKLGRRWPSAASVKSSSSDTGSRSSEPLPPPPPHVELRRVGAVKAAGGASGSRAKRISQLFRGSGTGTTGSGGAGGPGTPGAAQRWASEKKLPELAAGVAPEPPLAARATAPPGVLKIFGAGLASGANYKSVLATARSTARELVAEALERYGLAGSPGSGPGESSCVDAFALCDALGRPGAGAVGSGEWRAEHLRVLGDSERPLLVQELWRARPGWARRFELRGREEARRLEQEPSGRRTAMVSTGAPSWRPQKNRSRAASGGAALASPSPGSGSGPPAGSGGKERSENLSLRRSVSELSLQGRRRRQQERRQQALSMAPGAADAQIGPVDPGDFDQLTQCLIQAPSNRPYFLLLQGYQDAQDFVVYVMTREQHVFGRGGNSSARGASPAPYVDTFLNAPDILPRHCTVRAGPEPPAMVRPSRGAPVTHNGCLLLREAELHPGDLLGLGEHFLFMYKDPRSGGSGPARPSWLPARPGATPPGPGWAFSCRLCGRGLQERGEALAAYLDGREPVLRFRPREEEALLGEIVHTAATGAGDLPPLGPATLLALCVQHSARELELGHLPRLLGRLARLIKEAVWEKIKEIGDRQPENHPEGVPEVPLTPEAVSVELQPLMLWMANTTELLSFVQEKVLEMEKEADQEGELGPQLCNDLELCDEAMALLDEVIMCTFQQSVYYLTKTLYSTLPALLDSNPFTAGAELPGPGAELGAMPPGLRPTLGVFQAALELTSQCELHPDLVSQTFGYLFFFSNASLLNSLMERGQGRPFYQWSRAVQIRTNLDLVLDWLQGAGLGDIATEFFRKLSMAVNLLCVPRTSLLKASWSSLRTDHPTLTPAQLHHLLSHYQLGPGRGPPPAWDPPSAERDAVDTGDIFESFSSHPPLILPLGSSRLCLTGPVTDDALHRELRRLRRLLWDLEQQELPANHRHGPPVTTPP", "length": 967, "header": "tr|I3LIC8-1|I3LIC8_PIG Isoform 1 of Ras-interacting protein 1 OS=Sus scrofa OX=9823 GN=RASIP1 PE=1 SV=3 CANONICAL=I3LIC8-1" }, "locus": { "chromosome": "6", "start_pos": 54072061, "end_pos": 54058967, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023329.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023329.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023832.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023832.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 111, "start_aa": "Thr", "end_pos": 111, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr111", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 511, "start_aa": "Thr", "end_pos": 511, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr511", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LIC8", "url": "https://www.uniprot.org/uniprotkb/I3LIC8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "angiogenesis", "id": "GO:0001525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001525", "evidence": [ { "database": "UniProtKB", "id": "I3LIC8", "url": "https://www.uniprot.org/uniprotkb/I3LIC8" } ], "pmid": "" }, { "name": "vasculogenesis", "id": "GO:0001570", "url": 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"end_pos": 84148088, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030099.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030099.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023876.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023876.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LIH1", "url": "https://www.uniprot.org/uniprotkb/I3LIH1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627578", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627578", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q3MKP9-1", "protein_name": "Protein BEX4", "gene_name": "Bex4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKVKQVILDLTVEKDKKNKKGGKASKQSEEESHHLEEVENKKPGGNVRRKVRRLVPNFLWAIPNRHVDHSEGGEEVGRFVGQVMEAKRKSKEQQMRPYTRFRTPEPDNHYDFCLIP", "length": 118 }, "evidence": [ { "id": "I3LIH1", "url": "https://omabrowser.org/oma/group/I3LIH1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CWT2-1", "protein_name": "Protein BEX4", "gene_name": "Bex4", "tax_id": 10090, 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